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Author SHA1 Message Date
Kyle Meyer
d4160848a0
gnu: git-annex: Update to 7.20200219. 
* gnu/packages/haskell-apps.scm (git-annex): Update to 7.20200219.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2020-02-20 16:30:29 -05:00
Leo Famulari
cbfa8bb313
gnu: perl-image-exiftool: Update to 11.85. 
* gnu/packages/photo.scm (perl-image-exiftool): Update to 11.85.
 2020-02-20 16:30:22 -05:00
Leo Famulari
0dc1f651a8
gnu: RawTherapee: Update to 5.8. 
* gnu/packages/photo.scm (rawtherapee): Update to 5.8.
 2020-02-20 15:00:28 -05:00
Lars-Dominik Braun
ef30ddb2c2
gnu: Add Kerberos support to libssh 
* gnu/packages/ssh.scm (libssh)[inputs]: Depend on mit-krb5

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2020-02-20 11:14:39 +01:00
Leo Famulari
9b2310a0b4
gnu: certbot, python-acme: Update to 1.2.0. 
* gnu/packages/tls.scm (certbot, python-acme): Update to 1.2.0.
 2020-02-19 22:51:57 -05:00
Mark H Weaver
3be96aa9d9
gnu: linux-libre: Update to 5.4.21. 
* gnu/packages/linux.scm (linux-libre-5.4-version): Update to 5.4.21.
(linux-libre-5.4-pristine-source): Update hash.
 2020-02-19 22:32:39 -05:00
Mark H Weaver
bfab5ce9c4
gnu: linux-libre@4.19: Update to 4.19.105. 
* gnu/packages/linux.scm (linux-libre-4.19-version): Update to 4.19.105.
(linux-libre-4.19-pristine-source): Update hash.
 2020-02-19 22:31:21 -05:00
Julien Lepiller
6dde98c3d9
gnu: libevent: Split into two outputs. 
This removes python and its dependencies from the libevent closure,
reducing it from 180MB to 70MB.

* gnu/packages/libevent.scm (libevent): Add bin output.
 2020-02-20 02:09:56 +01:00
Tobias Geerinckx-Rice
00c967f6a4
gnu: js-selectize: Use HTTPS home page. 
* gnu/packages/javascript.scm (js-selectize)[home-page]: Use HTTPS.
 2020-02-19 23:48:26 +01:00
Tobias Geerinckx-Rice
082c733c1d
gnu: python-scikit-image: Use HTTPS home page. 
* gnu/packages/python-science.scm (python-scikit-image)[home-page]: Use HTTPS.
 2020-02-19 23:48:15 +01:00
Tobias Geerinckx-Rice
1dc184b441
gnu: transset-df: Use HTTPS home page. 
* gnu/packages/xorg.scm (transset-df)[home-page]: Use HTTPS.
 2020-02-19 23:43:40 +01:00
Tobias Geerinckx-Rice
5ee0e01320
gnu: munge: Update to 0.5.14. 
* gnu/packages/admin.scm (munge): Update to 0.5.14.
[source]: Expand snippet.
[arguments]: Continue installing pkg-config file.
Add new ‘skip-failing-tests’ for the new test suite.
 2020-02-19 23:43:40 +01:00
Tobias Geerinckx-Rice
7039b199a2
gnu: crypto++: Update to 8.2.0. 
* gnu/packages/crypto.scm (crypto++): Update to 8.2.0.
 2020-02-19 23:43:40 +01:00
Tobias Geerinckx-Rice
e54b381dd4
gnu: crypto++: Returt #t from all phases. 
* gnu/packages/crypto.scm (crypto++)[arguments]: Return #t from
‘install-pkg-config’.
 2020-02-19 23:43:39 +01:00
Tobias Geerinckx-Rice
bfa3caa2fb
gnu: crypto++: Build in parallel. 
* gnu/packages/crypto.scm (crypto++)[arguments]: Make ‘build-shared’
the main ‘build’ phase.  Respect MAKE-FLAGS and PARALLEL-JOB-COUNT.
 2020-02-19 23:43:39 +01:00
Tobias Geerinckx-Rice
3ca6c1a720
gnu: crypto++: Don't hard-code VERSION. 
* gnu/packages/crypto.scm (crypto++)[arguments]: Use package VERSION.
 2020-02-19 23:43:39 +01:00
Tobias Geerinckx-Rice
e48390cb20
gnu: libbytesize: Update to 2.2. 
* gnu/packages/c.scm (libbytesize): Update to 2.2.
 2020-02-19 23:43:39 +01:00
Ricardo Wurmus
f55084b782
gnu: r-scran: Update to 1.14.6. 
* gnu/packages/bioinformatics.scm (r-scran): Update to 1.14.6.
 2020-02-19 23:00:58 +01:00
Ricardo Wurmus
9374f550e6
gnu: r-hdf5array: Update to 1.14.2. 
* gnu/packages/bioinformatics.scm (r-hdf5array): Update to 1.14.2.
 2020-02-19 23:00:53 +01:00
Ricardo Wurmus
f2b9f41234
gnu: r-gviz: Update to 1.30.3. 
* gnu/packages/bioinformatics.scm (r-gviz): Update to 1.30.3.
 2020-02-19 23:00:48 +01:00
Ricardo Wurmus
3f4f3a7822
gnu: r-rhtslib: Update to 1.18.1. 
* gnu/packages/bioinformatics.scm (r-rhtslib): Update to 1.18.1.
 2020-02-19 23:00:42 +01:00
Ricardo Wurmus
f0e330d68b
gnu: r-genomicfeatures: Update to 1.38.2. 
* gnu/packages/bioinformatics.scm (r-genomicfeatures): Update to 1.38.2.
 2020-02-19 23:00:36 +01:00
Ricardo Wurmus
154babb9c4
gnu: r-rsamtools: Update to 2.2.2. 
* gnu/packages/bioinformatics.scm (r-rsamtools): Update to 2.2.2.
 2020-02-19 23:00:31 +01:00
Ricardo Wurmus
e0ca7b3a14
gnu: r-limma: Update to 3.42.2. 
* gnu/packages/bioinformatics.scm (r-limma): Update to 3.42.2.
 2020-02-19 23:00:25 +01:00
Ricardo Wurmus
0f72b7abd8
gnu: r-shortread: Update to 1.44.3. 
* gnu/packages/bioinformatics.scm (r-shortread): Update to 1.44.3.
 2020-02-19 23:00:20 +01:00
Ricardo Wurmus
d66901e2c3
gnu: r-depecher: Update to 1.2.1. 
* gnu/packages/bioconductor.scm (r-depecher): Update to 1.2.1.
 2020-02-19 23:00:13 +01:00
Ricardo Wurmus
f607098f05
gnu: r-mixomics: Update to 6.10.8. 
* gnu/packages/bioconductor.scm (r-mixomics): Update to 6.10.8.
 2020-02-19 23:00:08 +01:00
Ricardo Wurmus
e01fa33baa
gnu: r-rsubread: Update to 2.0.1. 
* gnu/packages/bioconductor.scm (r-rsubread): Update to 2.0.1.
 2020-02-19 23:00:02 +01:00
Ricardo Wurmus
f86549cbb6
gnu: r-atacseqqc: Update to 1.10.2. 
* gnu/packages/bioconductor.scm (r-atacseqqc): Update to 1.10.2.
 2020-02-19 22:59:56 +01:00
Ricardo Wurmus
776e98fe05
gnu: r-heatplus: Update to 2.32.1. 
* gnu/packages/bioconductor.scm (r-heatplus): Update to 2.32.1.
 2020-02-19 22:59:49 +01:00
Ricardo Wurmus
effbf7d986
gnu: r-biocsingular: Update to 1.2.2. 
* gnu/packages/bioconductor.scm (r-biocsingular): Update to 1.2.2.
 2020-02-19 22:59:44 +01:00
Ricardo Wurmus
b7e86efd3b
gnu: r-inspect: Update to 1.16.3. 
* gnu/packages/bioconductor.scm (r-inspect): Update to 1.16.3.
 2020-02-19 22:59:35 +01:00
Ricardo Wurmus
e40d6c4c7a
gnu: r-biclust: Update to 2.0.2. 
* gnu/packages/cran.scm (r-biclust): Update to 2.0.2.
 2020-02-19 21:19:55 +01:00
Ricardo Wurmus
1a060eabf8
gnu: r-tolerance: Update to 2.0.0. 
* gnu/packages/cran.scm (r-tolerance): Update to 2.0.0.
[propagated-inputs]: Add r-mass.
 2020-02-19 21:19:39 +01:00
Ricardo Wurmus
a3d80e6212
gnu: r-imager: Update to 0.42.1. 
* gnu/packages/cran.scm (r-imager): Update to 0.42.1.
[propagated-inputs]: Remove r-cairo and r-plyr.
 2020-02-19 21:19:04 +01:00
Ricardo Wurmus
90d499782e
gnu: r-actigraphy: Update to 1.4.0. 
* gnu/packages/cran.scm (r-actigraphy): Update to 1.4.0.
[propagated-inputs]: Remove r-sdmtools.
 2020-02-19 21:18:30 +01:00
Ricardo Wurmus
46d833ef98
gnu: r-actfrag: Update to 0.1.1. 
* gnu/packages/cran.scm (r-actfrag): Update to 0.1.1.
 2020-02-19 21:18:22 +01:00
Ricardo Wurmus
fd483cb370
gnu: r-gamlss: Update to 5.1-6. 
* gnu/packages/cran.scm (r-gamlss): Update to 5.1-6.
 2020-02-19 21:18:14 +01:00
Ricardo Wurmus
1a3a1d66d6
gnu: r-randtoolbox: Update to 1.30.1. 
* gnu/packages/cran.scm (r-randtoolbox): Update to 1.30.1.
 2020-02-19 21:18:07 +01:00
Ricardo Wurmus
e7705bc267
gnu: r-showtext: Update to 0.7-1. 
* gnu/packages/cran.scm (r-showtext): Update to 0.7-1.
 2020-02-19 21:18:00 +01:00
Ricardo Wurmus
8343dcf1aa
gnu: r-abcrlda: Update to 1.0.2. 
* gnu/packages/cran.scm (r-abcrlda): Update to 1.0.2.
 2020-02-19 21:17:52 +01:00
Ricardo Wurmus
6abb66d1be
gnu: r-bios2cor: Update to 2.1. 
* gnu/packages/cran.scm (r-bios2cor): Update to 2.1.
 2020-02-19 21:17:43 +01:00
Ricardo Wurmus
5130dd52eb
gnu: r-parameters: Update to 0.5.0. 
* gnu/packages/cran.scm (r-parameters): Update to 0.5.0.
 2020-02-19 21:17:35 +01:00
Ricardo Wurmus
469c484afc
gnu: r-assertr: Update to 2.7. 
* gnu/packages/cran.scm (r-assertr): Update to 2.7.
 2020-02-19 21:17:27 +01:00
Ricardo Wurmus
16703ceaea
gnu: r-leiden: Update to 0.3.3. 
* gnu/packages/cran.scm (r-leiden): Update to 0.3.3.
 2020-02-19 21:17:18 +01:00
Ricardo Wurmus
0f303adfe5
gnu: r-styler: Update to 1.3.1. 
* gnu/packages/cran.scm (r-styler): Update to 1.3.1.
[propagated-inputs]: Add r-r-cache.
 2020-02-19 21:17:02 +01:00
Ricardo Wurmus
ff92cd1de4
gnu: r-lintr: Update to 2.0.1. 
* gnu/packages/cran.scm (r-lintr): Update to 2.0.1.
[propagated-inputs]: Remove r-stringdist.
 2020-02-19 21:16:38 +01:00
Ricardo Wurmus
6e94ba488c
gnu: r-ggraph: Update to 2.0.1. 
* gnu/packages/cran.scm (r-ggraph): Update to 2.0.1.
 2020-02-19 21:16:27 +01:00
Ricardo Wurmus
2d1788f48d
gnu: r-rmetasim: Update to 3.1.14. 
* gnu/packages/cran.scm (r-rmetasim): Update to 3.1.14.
 2020-02-19 21:16:20 +01:00
Ricardo Wurmus
886cd33460
gnu: r-sf: Update to 0.8-1. 
* gnu/packages/cran.scm (r-sf): Update to 0.8-1.
 2020-02-19 21:16:11 +01:00
Ricardo Wurmus
ffe45e0aa0
gnu: r-deldir: Update to 0.1-25. 
* gnu/packages/cran.scm (r-deldir): Update to 0.1-25.
 2020-02-19 21:16:03 +01:00
Ricardo Wurmus
7227fd4388
gnu: r-spdata: Update to 0.3.3. 
* gnu/packages/cran.scm (r-spdata): Update to 0.3.3.
[propagated-inputs]: Add r-raster and r-sp.
 2020-02-19 21:15:46 +01:00
Ricardo Wurmus
3f1c75ee3a
gnu: r-picante: Update to 1.8.1. 
* gnu/packages/cran.scm (r-picante): Update to 1.8.1.
 2020-02-19 21:15:37 +01:00
Ricardo Wurmus
5e1c84e5f0
gnu: r-repr: Update to 1.1.0. 
* gnu/packages/cran.scm (r-repr): Update to 1.1.0.
 2020-02-19 21:15:30 +01:00
Ricardo Wurmus
50c0f22fad
gnu: r-gamlss-dist: Update to 5.1-6. 
* gnu/packages/cran.scm (r-gamlss-dist): Update to 5.1-6.
 2020-02-19 21:15:20 +01:00
Ricardo Wurmus
2d5c38f500
gnu: r-blockmodeling: Update to 0.3.6. 
* gnu/packages/cran.scm (r-blockmodeling): Update to 0.3.6.
[propagated-inputs]: Remove r-doparallel, r-dorng, and r-foreach.
 2020-02-19 21:14:52 +01:00
Ricardo Wurmus
8150ebedb8
gnu: r-rsvd: Update to 1.0.3. 
* gnu/packages/cran.scm (r-rsvd): Update to 1.0.3.
 2020-02-19 21:14:45 +01:00
Ricardo Wurmus
ecf7477b6e
gnu: r-mcmc: Update to 0.9-6.1. 
* gnu/packages/cran.scm (r-mcmc): Update to 0.9-6.1.
 2020-02-19 21:14:36 +01:00
Ricardo Wurmus
8f5468e7e7
gnu: r-etm: Update to 1.0.5.1. 
* gnu/packages/cran.scm (r-etm): Update to 1.0.5.1.
 2020-02-19 21:14:24 +01:00
Ricardo Wurmus
dbfbef8729
gnu: r-protviz: Update to 0.6.0. 
* gnu/packages/cran.scm (r-protviz): Update to 0.6.0.
 2020-02-19 21:14:16 +01:00
Ricardo Wurmus
4e977a9bf2
gnu: r-genenet: Update to 1.2.14. 
* gnu/packages/cran.scm (r-genenet): Update to 1.2.14.
 2020-02-19 21:14:08 +01:00
Ricardo Wurmus
30ef5e8205
gnu: r-fields: Update to 10.3. 
* gnu/packages/cran.scm (r-fields): Update to 10.3.
 2020-02-19 21:13:59 +01:00
Ricardo Wurmus
fb413fff5c
gnu: r-rnifti: Update to 1.1.0. 
* gnu/packages/cran.scm (r-rnifti): Update to 1.1.0.
 2020-02-19 21:13:48 +01:00
Ricardo Wurmus
846ec72241
gnu: r-waveslim: Update to 1.7.5.2. 
* gnu/packages/cran.scm (r-waveslim): Update to 1.7.5.2.
 2020-02-19 21:13:39 +01:00
Ricardo Wurmus
0c13ce8c72
gnu: r-ks: Update to 1.11.7. 
* gnu/packages/cran.scm (r-ks): Update to 1.11.7.
 2020-02-19 21:13:31 +01:00
Ricardo Wurmus
0227947fbf
gnu: r-rgl: Update to 0.100.47. 
* gnu/packages/cran.scm (r-rgl): Update to 0.100.47.
 2020-02-19 21:13:20 +01:00
Ricardo Wurmus
969c933fb9
gnu: r-weights: Update to 1.0.1. 
* gnu/packages/cran.scm (r-weights): Update to 1.0.1.
 2020-02-19 21:13:07 +01:00
Ricardo Wurmus
7bc252902d
gnu: r-summarytools: Update to 0.9.5. 
* gnu/packages/cran.scm (r-summarytools): Update to 0.9.5.
[propagated-inputs]: Add r-base64enc; remove r-rcurl.
 2020-02-19 21:12:39 +01:00
Ricardo Wurmus
a8a261b0f1
gnu: r-remotes: Update to 2.1.1. 
* gnu/packages/cran.scm (r-remotes): Update to 2.1.1.
 2020-02-19 21:12:26 +01:00
Ricardo Wurmus
1f4ec0d578
gnu: r-ggeffects: Update to 0.14.1. 
* gnu/packages/cran.scm (r-ggeffects): Update to 0.14.1.
[propagated-inputs]: Remove r-magrittr, r-purrr, and r-sjmisc.
 2020-02-19 21:11:50 +01:00
Ricardo Wurmus
155f188634
gnu: r-performance: Update to 0.4.4. 
* gnu/packages/cran.scm (r-performance): Update to 0.4.4.
 2020-02-19 21:11:40 +01:00
Ricardo Wurmus
e9f6089744
gnu: r-bayestestr: Update to 0.5.2. 
* gnu/packages/cran.scm (r-bayestestr): Update to 0.5.2.
 2020-02-19 21:11:17 +01:00
Ricardo Wurmus
0fb7f0acca
gnu: r-glmmtmb: Update to 1.0.0. 
* gnu/packages/cran.scm (r-glmmtmb): Update to 1.0.0.
 2020-02-19 21:11:02 +01:00
Ricardo Wurmus
f09351f4c5
gnu: r-sjstats: Update to 0.17.9. 
* gnu/packages/cran.scm (r-sjstats): Update to 0.17.9.
 2020-02-19 21:10:45 +01:00
Ricardo Wurmus
2be78b58a4
gnu: r-emmeans: Update to 1.4.4. 
* gnu/packages/cran.scm (r-emmeans): Update to 1.4.4.
 2020-02-19 21:10:36 +01:00
Ricardo Wurmus
59987505c0
gnu: r-raster: Update to 3.0-12. 
* gnu/packages/cran.scm (r-raster): Update to 3.0-12.
 2020-02-19 21:10:20 +01:00
Ricardo Wurmus
f0e83d6856
gnu: r-ggformula: Update to 0.9.3. 
* gnu/packages/cran.scm (r-ggformula): Update to 0.9.3.
[propagated-inputs]: Add r-ggforce.
 2020-02-19 21:09:53 +01:00
Ricardo Wurmus
0048894f33
gnu: r-doby: Update to 4.6-4.1. 
* gnu/packages/cran.scm (r-doby): Update to 4.6-4.1.
 2020-02-19 21:09:42 +01:00
Ricardo Wurmus
bfbb33e8f8
gnu: r-flextable: Update to 0.5.8. 
* gnu/packages/cran.scm (r-flextable): Update to 0.5.8.
 2020-02-19 21:09:30 +01:00
Ricardo Wurmus
544366842b
gnu: r-sjlabelled: Update to 1.1.3. 
* gnu/packages/cran.scm (r-sjlabelled): Update to 1.1.3.
 2020-02-19 21:09:20 +01:00
Ricardo Wurmus
cedf4aa48c
gnu: r-insight: Update to 0.8.1. 
* gnu/packages/cran.scm (r-insight): Update to 0.8.1.
 2020-02-19 21:09:10 +01:00
Ricardo Wurmus
8151a35812
gnu: r-factominer: Update to 2.2. 
* gnu/packages/cran.scm (r-factominer): Update to 2.2.
 2020-02-19 21:08:59 +01:00
Ricardo Wurmus
d99a211d2d
gnu: r-ggpubr: Update to 0.2.5. 
* gnu/packages/cran.scm (r-ggpubr): Update to 0.2.5.
 2020-02-19 21:08:47 +01:00
Ricardo Wurmus
398c8be0a2
gnu: r-learnr: Update to 0.10.1. 
* gnu/packages/cran.scm (r-learnr): Update to 0.10.1.
 2020-02-19 21:08:36 +01:00
Ricardo Wurmus
ab06092c5e
gnu: r-renv: Update to 0.9.3. 
* gnu/packages/cran.scm (r-renv): Update to 0.9.3.
 2020-02-19 21:08:24 +01:00
Ricardo Wurmus
de20b0f271
gnu: r-vim: Update to 5.1.0. 
* gnu/packages/cran.scm (r-vim): Update to 5.1.0.
[propagated-inputs]: Add r-magrittr.
 2020-02-19 21:08:00 +01:00
Ricardo Wurmus
2d37face53
gnu: r-np: Update to 0.60-10. 
* gnu/packages/cran.scm (r-np): Update to 0.60-10.
 2020-02-19 21:07:43 +01:00
Ricardo Wurmus
2097da3e8c
gnu: r-processx: Update to 3.4.2. 
* gnu/packages/cran.scm (r-processx): Update to 3.4.2.
 2020-02-19 21:07:28 +01:00
Ricardo Wurmus
fa27e4d2ba
gnu: r-laeken: Update to 0.5.1. 
* gnu/packages/cran.scm (r-laeken): Update to 0.5.1.
 2020-02-19 21:07:18 +01:00
Ricardo Wurmus
42e45862ea
gnu: r-performanceanalytics: Update to 2.0.4. 
* gnu/packages/cran.scm (r-performanceanalytics): Update to 2.0.4.
 2020-02-19 21:07:07 +01:00
Ricardo Wurmus
aed2fe3f77
gnu: r-rmysql: Update to 0.10.19. 
* gnu/packages/cran.scm (r-rmysql): Update to 0.10.19.
 2020-02-19 21:06:54 +01:00
Ricardo Wurmus
e92370a10e
gnu: r-drr: Update to 0.0.4. 
* gnu/packages/cran.scm (r-drr): Update to 0.0.4.
 2020-02-19 21:06:43 +01:00
Ricardo Wurmus
30e1fff333
gnu: r-emdbook: Update to 1.3.12. 
* gnu/packages/cran.scm (r-emdbook): Update to 1.3.12.
[propagated-inputs]: Remove r-rcpp.
 2020-02-19 21:06:18 +01:00
Ricardo Wurmus
d05c224c3b
gnu: r-bbmle: Update to 1.0.23.1. 
* gnu/packages/cran.scm (r-bbmle): Update to 1.0.23.1.
 2020-02-19 21:06:04 +01:00
Ricardo Wurmus
4332a46ca7
gnu: r-dendextend: Update to 1.13.3. 
* gnu/packages/cran.scm (r-dendextend): Update to 1.13.3.
 2020-02-19 21:05:48 +01:00
Ricardo Wurmus
01fb586285
gnu: r-ps: Update to 1.3.2. 
* gnu/packages/cran.scm (r-ps): Update to 1.3.2.
 2020-02-19 21:05:32 +01:00
Ricardo Wurmus
a7474115bf
gnu: r-rgooglemaps: Update to 1.4.5.3. 
* gnu/packages/cran.scm (r-rgooglemaps): Update to 1.4.5.3.
[propagated-inputs]: Add r-sp.
 2020-02-19 21:04:51 +01:00
Ricardo Wurmus
437825dd0a
gnu: r-mapproj: Update to 1.2.7. 
* gnu/packages/cran.scm (r-mapproj): Update to 1.2.7.
 2020-02-19 21:04:29 +01:00
Ricardo Wurmus
256761021c
gnu: r-jsonlite: Update to 1.6.1. 
* gnu/packages/cran.scm (r-jsonlite): Update to 1.6.1.
 2020-02-19 21:03:05 +01:00
Ricardo Wurmus
ed5e514dff
gnu: r-callr: Update to 3.4.2. 
* gnu/packages/cran.scm (r-callr): Update to 3.4.2.
 2020-02-19 21:02:52 +01:00