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610 commits

Author SHA1 Message Date
Tobias Geerinckx-Rice
725449bd7a
gnu: python-pyodbc: Update to 4.0.24. 
* gnu/packages/databases.scm (python-pyodbc): Update to 4.0.24.
 2018-08-20 20:17:19 +02:00
Tobias Geerinckx-Rice
28635e5266
gnu: python-mysqlclient: Update to 1.3.13. 
* gnu/packages/databases.scm (python-mysqlclient): Update to 1.3.13.
 2018-08-20 20:17:19 +02:00
Tobias Geerinckx-Rice
db4e76416c
gnu: perl-dbd-sqlite: Update to 1.58. 
* gnu/packages/databases.scm (perl-dbd-sqlite): Update to 1.58.
 2018-08-20 20:17:19 +02:00
Roel Janssen
e63da346cf
gnu: Update virtuoso-ose to 7.2.5. 
* gnu/packages/databases.scm (virtuoso-ose): Update to 7.2.5.
 2018-08-20 16:13:45 +02:00
Marius Bakke
df570bf271
Merge branch 'master' into staging 2018-08-16 20:56:38 +02:00
Marius Bakke
0a1f520d40
gnu: r-rmysql: Add missing dependency on OpenSSL. 
* gnu/packages/databases.scm (r-rmysql)[inputs]: Add OPENSSL.
 2018-08-16 17:39:10 +02:00
Tobias Geerinckx-Rice
7fe3a57ac5
gnu: mysql: Use HTTPS. 
* gnu/packages/databases.scm (mysql)[source, home-page]: Use HTTPS.
 2018-08-16 00:58:27 +02:00
Pierre Langlois
7bcc34050b
gnu: clementine: Fix creating initial database. 
It seems a recent version of sqlite broke Clementine's first startup. It turns
out we can patch clementine to fix the problem instead of providing a different
sqlite package:
<https://github.com/clementine-player/Clementine/pull/5669>

* gnu/packages/databases.scm (sqlite-with-fts3): Remove.
* gnu/packages/music.scm (clementine)[inputs]: Replace sqlite-with-fts3 with
sqlite.
[source]: Add clementine-fix-sqlite.patch.
* gnu/packages/patches/clementine-fix-sqlite.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2018-08-15 14:29:56 -04:00
Tobias Geerinckx-Rice
34ba1b8fc5
gnu: perl-db-file: Update to 1.842. 
* gnu/packages/databases.scm (perl-db-file): Update to 1.842.
 2018-08-15 00:32:15 +02:00
Tobias Geerinckx-Rice
61d996b921
gnu: memcached: Fix typos in description. 
* gnu/packages/databases.scm (memcached)[synopsis, description]:
Hyphenate.
 2018-08-15 00:30:04 +02:00
Tobias Geerinckx-Rice
b432c05203
gnu: memcached: Update to 1.5.10. 
* gnu/packages/databases.scm (memcached): Update to 1.5.10.
 2018-08-14 15:54:31 +02:00
Ricardo Wurmus
b86c019efb
Merge branch 'staging' into core-updates 2018-08-13 20:39:32 +02:00
Tobias Geerinckx-Rice
9aba9b1278
Migrate search.cpan.org home pages to metacpan.org. 
The venerable search.cpan.org has retired[0].

[0]: https://log.perl.org/2018/05/goodbye-search-dot-cpan-dot-org.html

* guix/import/cpan.scm (cpan-home): Generate metacpan.org home page URIs.
Update all previously generated ones in (gnu packages) to their
canonical new homes.
 2018-08-11 17:22:31 +02:00
Marius Bakke
369d15674c
gnu: mariadb: Update to 10.1.35 [security fixes]. 
This release fixes CVE-2018-3058, CVE-2018-3063, CVE-2018-3064 and CVE-2018-3066.
See <https://mariadb.com/kb/en/library/mariadb-10135-release-notes/> for details.

* gnu/packages/databases.scm (mariadb): Update to 10.1.35.
 2018-08-10 15:23:50 +02:00
Marius Bakke
516fe8deb5
gnu: postgresql: Update to 10.5 [fixes CVE-2018-10915, CVE-2018-10925]. 
* gnu/packages/databases.scm (postgresql): Update to 10.5.
 2018-08-10 15:23:50 +02:00
Efraim Flashner
62694caa44
gnu: mariadb: Remove test which fails on armhf-linux. 
* gnu/packages/databases.scm (mariadb)[arguments]: Disable test
'mroonga/storage.index_read_multiple_double'.
 2018-08-07 19:55:33 +03:00
Marius Bakke
71179b35b8
gnu: mariadb: Further increase test timeouts. 
* gnu/packages/databases.scm (mariadb)[arguments]: Allow 40 minutes for single
tests, and 600 in total.
 2018-08-07 13:41:08 +02:00
Marius Bakke
3418e43bf5
gnu: mariadb: Adjust to test failures on Hydra. 
* gnu/packages/patches/mariadb-client-test-32bit.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
* gnu/packages/databases.scm (mariadb)[source](patches): Add it.
[arguments]: Increase retry count and test timeout.  Disable test
main.myisampack.
 2018-08-07 00:51:48 +02:00
Marius Bakke
4214066d45
Merge branch 'master' into core-updates 2018-08-01 15:53:17 +02:00
Marius Bakke
869250809b
Merge branch 'master' into staging 2018-07-30 18:08:28 +02:00
Ben Woodcroft
19601e895b
gnu: python2-psycopg2: Update to 2.7.5. 
* gnu/packages/bioinformatics.scm (python2-psycopg2): Update to 2.7.5.
 2018-07-29 22:53:10 +10:00
Marius Bakke
0333582477
gnu: mariadb: Move GCC ICE patch to the usual location. 
* gnu/packages/databases.scm (mariadb)[source](patches): New field.
[arguments]: Don't disable semisync plugin.
[inputs]: Remove 'mariadb-gcc-ice.patch'.
 2018-07-28 18:37:37 +02:00
Marius Bakke
1af575f04d
Merge branch 'master' into staging 2018-07-28 18:34:59 +02:00
Ludovic Courtès
5193ae64ca
gnu: mariadb: Work around GCC ICE on armhf-linux. 
* gnu/packages/patches/mariadb-gcc-ice.patch: New file.
* gnu/packages/databases.scm (mariadb)[arguments]: Conditionally add
'apply-patch' phase.
[native-inputs]: Conditionally add "gcc-ice-patch" input.
 2018-07-28 15:08:07 +02:00
Marius Bakke
963157f1cc
gnu: mariadb: Delete test files and static libraries. 
* gnu/packages/databases.scm (mariadb)[arguments]: Adapt 'post-install' phase
  to purge static archives and test executables.
 2018-07-26 14:38:03 +02:00
Marius Bakke
2001d2dac4
gnu: mariadb: Remove some bundled libraries. 
* gnu/packages/databases.scm (mariadb)[source](snippet, modules): New fields.
[arguments]: Add explicit #:configure-flags for system libraries.  Add
'unbundle' phase.  Remove 'pre-configure' phase.
[inputs]: Add SNAPPY and XZ.
 2018-07-26 14:38:03 +02:00
Marius Bakke
03aed90b86
gnu: mariadb: Update to 10.1.34. 
* gnu/packages/databases.scm (mariadb): Update to 10.1.34.
 2018-07-26 14:38:02 +02:00
Marius Bakke
3869f39e6d
gnu: mariadb: Run the full test suite. 
* gnu/packages/databases.scm (mariadb)[arguments]: Override 'check' phase.
Add phase 'adjust-tests'.  Disable one more plugin.
[properties]: New field.
 2018-07-26 14:38:02 +02:00
Marius Bakke
5b4d2e40f1
gnu: mariadb: Disable plugin that fails on armhf. 
* gnu/packages/databases.scm (mariadb)[arguments]: Add 'disable-plugins' phase.
 2018-07-26 14:38:02 +02:00
Marius Bakke
4c27ea06d4
gnu: mariadb: Install pkg-config file to a standard location. 
* gnu/packages/databases.scm (mariadb)[#:configure-flags]: Set
INSTALL_SHAREDIR to "share".
 2018-07-26 14:37:29 +02:00
Marius Bakke
706ae8e15c
Merge branch 'master' into core-updates 2018-07-24 19:56:35 +02:00
Efraim Flashner
97dd1b154b
gnu: postgresql@9.6: Update to 9.6.9. 
* gnu/packages/databases.scm (postgresql@9.6): Update to 9.6.9.
 2018-07-15 22:59:24 +03:00
Marius Bakke
9761aca95c
gnu: unixodbc: Update to 2.3.6. 
* gnu/packages/databases.scm (unixodbc): Update to 2.3.6.
 2018-07-13 00:51:06 +02:00
Marius Bakke
49b6dc2b4e
Merge branch 'staging' 2018-07-13 00:25:45 +02:00
Marius Bakke
b7a2d2d9a9
gnu: tdb: Update to 1.3.16. 
* gnu/packages/databases.scm (tdb): Update to 1.3.16.
 2018-07-12 17:21:16 +02:00
Efraim Flashner
cb9a84bd89
gnu: gdbm: Update to 1.16. 
* gnu/packages/databases.scm (gdbm): Update to 1.16.
 2018-07-03 10:43:06 +03:00
Ricardo Wurmus
f1728d4346
Merge branch 'master' into core-updates 2018-06-29 22:51:23 +02:00
Marius Bakke
4dfea1010a
Merge branch 'master' into staging 2018-06-21 15:52:26 +02:00
Tobias Geerinckx-Rice
cd0750fcf2
gnu: memcached: Update to 1.5.8. 
* gnu/packages/databases.scm (memcached): Update to 1.5.8.
 2018-06-20 04:56:33 +02:00
Marius Bakke
0106d6b40d
Merge branch 'master' into staging 2018-06-19 17:02:16 +02:00
Marius Bakke
793a66e5fe
gnu: redis: Update to 4.0.10 [fixes CVE-2018-11218, CVE-2018-11219]. 
* gnu/packages/databases.scm (redis): Update to 4.0.10.
 2018-06-19 15:54:49 +02:00
Marius Bakke
6969c4de44
Merge branch 'master' into staging 2018-06-18 15:29:38 +02:00
Tobias Geerinckx-Rice
f71619648c
gnu: perl-dbi: Update to 1.641. 
* gnu/packages/databases.scm (perl-dbi): Update to 1.641.
 2018-06-14 18:55:51 +02:00
Tobias Geerinckx-Rice
d30e9e6109
gnu: sqlite: Update to 3.24.0. 
* gnu/packages/databases.scm (sqlite): Update to 3.24.0.
 2018-06-12 15:06:23 +02:00
Marius Bakke
a032b4454b
Merge branch 'master' into staging 2018-06-11 23:52:15 +02:00
宋文武
cd8ece22bf
gnu: redis: Update to 4.0.9. 
* gnu/packages/database.scm (redis): Update to 4.0.9.
 2018-06-08 20:27:30 +08:00
Ricardo Wurmus
8709624756
Merge branch 'origin/core-updates-next' into core-updates 2018-06-06 23:01:48 +02:00
Ricardo Wurmus
116ca65b58
Merge branch 'master' into core-updates 2018-06-06 22:43:37 +02:00
Tobias Geerinckx-Rice
3b295d3f4b
gnu: python-lmdb: Update to 0.94. 
* gnu/packages/databases.scm (python-lmdb): Update to 0.94.
 2018-06-06 06:12:22 +02:00
Ricardo Wurmus
59f87b44da
Merge branch 'master' into core-updates 2018-05-31 13:23:49 +02:00
Ricardo Wurmus
ad016826c9
gnu: r-rmysql: Update to 0.10.15. 
* gnu/packages/databases.scm (r-rmysql): Update to 0.10.15.
 2018-05-31 13:21:31 +02:00
Efraim Flashner
d2dde99e99
gnu: mariadb: Update to 10.1.33. 
* gnu/packages/databases.scm (mariadb): Update to 10.1.33.
 2018-05-31 08:45:58 +03:00
Efraim Flashner
03d9031962
gnu: mariadb: Update to 10.1.33. 
* gnu/packages/databases.scm (mariadb): Update to 10.1.33.
 2018-05-30 22:46:31 +03:00
Tobias Geerinckx-Rice
1fbad3ad22
gnu: postgresql: Use INVOKE. 
* gnu/packages/databases.scm (postgresql)[arguments]: Substitute INVOKE for SYSTEM*.
 2018-05-24 23:59:14 +02:00
Tobias Geerinckx-Rice
7e0f04635b
gnu: postgresql: Update to 10.4 [fixes CVE-2018-1115]. 
* gnu/packages/databases.scm (postgresql): Update to 10.4.
 2018-05-24 23:59:14 +02:00
Mark H Weaver
f0ae90cbbb
Merge branch 'master' into core-updates 2018-04-30 16:48:15 -04:00
Tobias Geerinckx-Rice
1672e7e714
gnu: perl-dbix-class-schema-loader: Update to 0.07049. 
* gnu/packages/databases.scm (perl-dbix-class-schema-loader): Update to 0.07049.
 2018-04-30 21:36:11 +02:00
Tobias Geerinckx-Rice
435897c0f2
gnu: perl-dbix-class: Update to 0.082841. 
* gnu/packages/databases.scm (perl-dbix-class): Update to 0.082841.
 2018-04-30 21:36:10 +02:00
Marius Bakke
30d900d4ee
gnu: sqlite: Update to 3.23.1. 
* gnu/packages/databases.scm (sqlite): Update to 3.23.1.
 2018-04-30 20:48:55 +02:00
Mark H Weaver
3d5ad159b3
Merge branch 'master' into core-updates 2018-04-30 04:03:54 -04:00
Marius Bakke
8bf8dedc9a
gnu: rocksdb: Update to 5.12.4. 
* gnu/packages/databases.scm (rocksdb): Update to 5.12.4.
 2018-04-25 15:09:22 +02:00
Mark H Weaver
f89aa1521a
Merge branch 'master' into core-updates 2018-04-10 00:42:22 -04:00
Tobias Geerinckx-Rice
4bac91e1d8
gnu: perl-db-file: Update to 1.841. 
* gnu/packages/databases.scm (perl-db-file): Update to 1.841.
 2018-04-05 06:39:02 +02:00
Tobias Geerinckx-Rice
f560acf8d9
gnu: lmdb: Update to 0.9.22. 
* gnu/packages/databases.scm (lmdb): Update to 0.9.22.
 2018-04-05 06:39:01 +02:00
Roel Janssen
ea09f99f7f
gnu: 4store: Remove preprocessor directive. 
* gnu/packages/databases.scm (4store): Add patch to remove preprocessor
  directive.
* gnu/packages/patches/4store-unset-preprocessor-directive.patch: New file.
* gnu/local.mk: Register patch.
 2018-04-04 14:54:02 +02:00
Roel Janssen
6d09a7b5ec
gnu: virtuoso-ose: Unbundle zlib and build with readline support. 
* gnu/packages/databases.scm (virtuoso-ose):
  [inputs]: Add zlib, and readline;
  [arguments]: Add --without-internal-zlib, and --with-readline.
 2018-04-03 13:07:21 +02:00
Marius Bakke
bce2206021
gnu: sqlite: Update to 3.23.0. 
* gnu/packages/databases.scm (sqlite): Update to 3.23.0.
 2018-04-02 16:23:32 +02:00
Mark H Weaver
5114c83a24
gnu: bdb: Use invoke. 
* gnu/packages/databases.scm (bdb, bdb-5.3)[arguments]: Use invoke in the
custom configure phase.
 2018-03-25 05:01:32 -04:00
Mark H Weaver
2c48ed4e97
gnu: postgresql: Use invoke. 
* gnu/packages/databases.scm (postgresql)[arguments]: Use invoke in the
'build-contrib' and 'install-contrib' phases.
 2018-03-23 04:43:35 -04:00
Mark H Weaver
a0b06671c6
gnu: mysql: Return #t from all phases. 
* gnu/packages/databases.scm (mysql)[arguments]: Return #t from
the 'patch-boost-version' phase.
 2018-03-23 04:43:07 -04:00
Mark H Weaver
841ee2a878
gnu: mariadb: Return #t from all phases. 
* gnu/packages/databases.scm (mariadb)[arguments]: Return #t from
the 'post-install' phase.
 2018-03-23 04:42:55 -04:00
Mark H Weaver
ac21be848a
Merge branch 'master' into core-updates 2018-03-20 14:22:06 -04:00
ng0
4a78fd4617
Correct name and Email for ng0. 
* .mailmap: Correct name and Email for ng0.
* Makefile.am, doc/guix.texi, etc/completion/fish/guix.fish
gnu/packages/accessibility.scm, gnu/packages/admin.scm,
gnu/packages/audio.scm, gnu/packages/autotools.scm,
gnu/packages/cdrom.scm, gnu/packages/check.scm,
gnu/packages/cinnamon.scm, gnu/packages/compression.scm,
gnu/packages/crypto.scm, gnu/packages/databases.scm,
gnu/packages/django.scm, gnu/packages/dns.scm,
gnu/packages/emacs.scm, gnu/packages/enlightenment.scm,
gnu/packages/fonts.scm, gnu/packages/fontutils.scm,
gnu/packages/forth.scm, gnu/packages/fvwm.scm,
gnu/packages/games.scm, gnu/packages/gl.scm,
gnu/packages/gnome.scm, gnu/packages/gnunet.scm,
gnu/packages/gnupg.scm, gnu/packages/gnuzilla.scm,
gnu/packages/gtk.scm, gnu/packages/guile-wm.scm,
gnu/packages/guile.scm, gnu/packages/haskell-check.scm,
gnu/packages/haskell-crypto.scm, gnu/packages/haskell.scm,
gnu/packages/image-viewers.scm, gnu/packages/image.scm,
gnu/packages/irc.scm, gnu/packages/language.scm,
gnu/packages/libcanberra.scm, gnu/packages/linux.scm,
gnu/packages/lisp.scm, gnu/packages/lolcode.scm,
gnu/packages/lxde.scm, gnu/packages/lxqt.scm,
gnu/packages/mail.scm, gnu/packages/markup.scm,
gnu/packages/mate.scm, gnu/packages/maths.scm,
gnu/packages/mc.scm, gnu/packages/messaging.scm,
gnu/packages/music.scm, gnu/packages/ncurses.scm,
gnu/packages/networking.scm, gnu/packages/nickle.scm,
gnu/packages/openbox.scm, gnu/packages/pdf.scm,
gnu/packages/perl-check.scm, gnu/packages/perl.scm,
gnu/packages/python-crypto.scm, gnu/packages/python-web.scm,
gnu/packages/python.scm, gnu/packages/qt.scm,
gnu/packages/ruby.scm, gnu/packages/rust.scm,
gnu/packages/scheme.scm, gnu/packages/serialization.scm,
gnu/packages/shells.scm, gnu/packages/ssh.scm,
gnu/packages/suckless.scm, gnu/packages/tbb.scm,
gnu/packages/telephony.scm, gnu/packages/text-editors.scm,
gnu/packages/textutils.scm, gnu/packages/time.scm,
gnu/packages/tls.scm, gnu/packages/tor.scm,
gnu/packages/version-control.scm, gnu/packages/video.scm,
gnu/packages/vim.scm, gnu/packages/web.scm,
gnu/packages/wm.scm, gnu/packages/xdisorg.scm,
gnu/packages/xfce.scm, gnu/packages/xml.scm,
gnu/packages/xorg.scm, gnu/services/certbot.scm,
gnu/services/desktop.scm, gnu/services/version-control.scm,
gnu/services/web.scm, guix/import/hackage.scm,
guix/licenses.scm: Likewise.

Signed-off-by: Tobias Geerinckx-Rice <me@tobias.gr>
 2018-03-20 17:17:58 +01:00
Mark H Weaver
647888845c
Merge branch 'master' into core-updates 2018-03-20 00:49:05 -04:00
Tobias Geerinckx-Rice
3def739da1
gnu: Use the CMake build system's #:build-type key. 
* gnu/packages/code.scm (rtags)[arguments]: Move the CMAKE_BUILD_TYPE
from #:configure-flags to #:build-type.
* gnu/packages/databases.scm (apache-arrow)[arguments]: Likewise
* gnu/packages/engineering.scm (kicad)[arguments]: Likewise
* gnu/packages/flashing-tools.scm (heimdall)[arguments]: Likewise
* gnu/packages/graphics.scm (openscenegraph)[arguments]: Likewise
* gnu/packages/linux.scm (rdma-core)[arguments]: Likewise
* gnu/packages/music.scm (portmidi)[arguments]: Likewise
* gnu/packages/photo.scm (rawtherapee)[arguments]: Likewise
* gnu/packages/rdesktop.scm (freerdp)[arguments]: Likewise
* gnu/packages/serialization.scm (flatbuffers)[arguments]: Likewise
* gnu/packages/web.scm (tidy-html)[arguments]: Likewise
 2018-03-17 16:37:28 +01:00
Tobias Geerinckx-Rice
93e8731dcb
gnu: perl-sql-abstract: Update to 1.85. 
* gnu/packages/databases.scm (perl-sql-abstract): Update to 1.85.
 2018-03-17 16:37:19 +01:00
Mark H Weaver
9f388b1ee1
Merge branch 'master' into core-updates 2018-03-17 01:18:37 -04:00
Mark H Weaver
6cbee49d66
gnu: All snippets report errors using exceptions, else return #t. 
* gnu/packages/admin.scm, gnu/packages/algebra.scm, gnu/packages/audio.scm,
gnu/packages/backup.scm, gnu/packages/base.scm,
gnu/packages/bioinformatics.scm, gnu/packages/cdrom.scm,
gnu/packages/chez.scm, gnu/packages/code.scm, gnu/packages/compression.scm,
gnu/packages/cross-base.scm, gnu/packages/crypto.scm, gnu/packages/cups.scm,
gnu/packages/databases.scm, gnu/packages/dns.scm, gnu/packages/emacs.scm,
gnu/packages/emulators.scm, gnu/packages/engineering.scm,
gnu/packages/enlightenment.scm, gnu/packages/fpga.scm,
gnu/packages/freedesktop.scm, gnu/packages/ftp.scm, gnu/packages/games.scm,
gnu/packages/gcc.scm, gnu/packages/geo.scm, gnu/packages/ghostscript.scm,
gnu/packages/gl.scm, gnu/packages/glib.scm, gnu/packages/gnome.scm,
gnu/packages/gnuzilla.scm, gnu/packages/graphics.scm, gnu/packages/gtk.scm,
gnu/packages/guile.scm, gnu/packages/irc.scm, gnu/packages/java.scm,
gnu/packages/kerberos.scm, gnu/packages/linux.scm, gnu/packages/lisp.scm,
gnu/packages/lxde.scm, gnu/packages/machine-learning.scm,
gnu/packages/mail.scm, gnu/packages/maths.scm, gnu/packages/messaging.scm,
gnu/packages/monitoring.scm, gnu/packages/mp3.scm, gnu/packages/music.scm,
gnu/packages/netpbm.scm, gnu/packages/networking.scm, gnu/packages/node.scm,
gnu/packages/nvi.scm, gnu/packages/ocaml.scm, gnu/packages/pdf.scm,
gnu/packages/perl.scm, gnu/packages/php.scm, gnu/packages/plotutils.scm,
gnu/packages/pretty-print.scm, gnu/packages/profiling.scm,
gnu/packages/pulseaudio.scm, gnu/packages/python-crypto.scm,
gnu/packages/python.scm, gnu/packages/qt.scm, gnu/packages/robotics.scm,
gnu/packages/sawfish.scm, gnu/packages/scanner.scm, gnu/packages/scheme.scm,
gnu/packages/scribus.scm, gnu/packages/sdl.scm,
gnu/packages/serialization.scm, gnu/packages/shells.scm,
gnu/packages/slang.scm, gnu/packages/smalltalk.scm, gnu/packages/ssh.scm,
gnu/packages/sync.scm, gnu/packages/syncthing.scm, gnu/packages/tbb.scm,
gnu/packages/terminals.scm, gnu/packages/texinfo.scm,
gnu/packages/text-editors.scm, gnu/packages/textutils.scm,
gnu/packages/tls.scm, gnu/packages/unrtf.scm,
gnu/packages/version-control.scm, gnu/packages/video.scm,
gnu/packages/vpn.scm, gnu/packages/web.scm, gnu/packages/wm.scm,
gnu/packages/wxwidgets.scm, gnu/packages/xdisorg.scm, gnu/packages/xorg.scm:
In all snippets, report errors using exceptions, or else return #t.
 2018-03-16 09:08:31 -04:00
Leo Famulari
5e5ac7102c
gnu: Add python-pyarrow. 
* gnu/packages/databases.scm (python-pyarrow, python2-pyarrow): New variables.
 2018-03-15 10:57:52 -04:00
Leo Famulari
dae7661a0d
gnu: Add apache-arrow. 
* gnu/packages/databases.scm (apache-arrow): New variable.
 2018-03-15 10:57:52 -04:00
Marius Bakke
9a92b9e61a
gnu: gdbm: Update to 1.14.1. 
* gnu/packages/databases.scm (gdbm): Update to 1.14.1.
 2018-03-14 22:11:34 +01:00
Ricardo Wurmus
8c72ed923d
Merge branch 'master' into core-updates 2018-03-14 17:37:20 +01:00
Ludovic Courtès
189be331ac
build-system/gnu: Add 'bootstrap' phase. 
This factorizes what has become a widespread idiom.

* guix/build/gnu-build-system.scm (%bootstrap-scripts): New variable.
(bootstrap): New procedure.
(%standard-phases): Add it after 'unpack'.
* guix/build/ant-build-system.scm (%standard-phases): Delete 'bootstrap.
* guix/build/asdf-build-system.scm (%standard-phases/source)
(%standard-phases): Likewise.
* guix/build/cargo-build-system.scm (%standard-phases): Likewise.
* guix/build/cmake-build-system.scm (%standard-phases): Likewise.
* guix/build/dub-build-system.scm (%standard-phases): Likewise.
* guix/build/emacs-build-system.scm (%standard-phases): Likewise.
* guix/build/font-build-system.scm (%standard-phases): Likewise.
* guix/build/go-build-system.scm (%standard-phases): Likewise.
* guix/build/haskell-build-system.scm (%standard-phases): Likewise.
* guix/build/minify-build-system.scm (%standard-phases): Likewise.
* guix/build/ocaml-build-system.scm (%standard-phases): Likewise.
* guix/build/perl-build-system.scm (%standard-phases): Likewise.
* guix/build/python-build-system.scm (%standard-phases): Likewise.
* guix/build/r-build-system.scm (%standard-phases): Likewise.
* guix/build/ruby-build-system.scm (%standard-phases): Likewise.
* guix/build/scons-build-system.scm (%standard-phases): Likewise.
* guix/build/texlive-build-system.scm (%standard-phases): Likewise.
* guix/build/waf-build-system.scm (%standard-phases): Likewise.
* gnu/packages/audio.scm (faad2)[arguments]: Replace 'bootstrap.
(soundtouch, cuetools, bluez-alsa): Remove 'arguments'.
(cava)[arguments]: Replace 'bootstrap.
* gnu/packages/backup.scm (rdup): Remove 'bootstrap.
* gnu/packages/bioinformatics.scm (seek)[arguments]: Replace
'bootstrap.
* gnu/packages/bioinformatics.scm (htslib-for-sambamba): Remove
'arguments'.
* gnu/packages/ci.scm (hydra, cuirass): Remove 'bootstrap'.
* gnu/packages/crypto.scm (libb2): Remove #:phases.
* gnu/packages/databases.scm (guile-wiredtiger): Likewise.
* gnu/packages/debug.scm (stress-make): Remove 'bootstrap'.
* gnu/packages/documentation.scm (asciidoc): Likewise.
* gnu/packages/fontutils.scm (libuninameslist): Remove 'arguments'.
* gnu/packages/ftp.scm (weex): Remove 'arguments'.
* gnu/packages/game-development.scm (ois): Remove 'arguments'.
* gnu/packages/games.scm (pioneer): Remove 'bootstrap.
* gnu/packages/gnome.scm (vte-ng, byzanz): Replace 'bootstrap.
(arc-theme): Remove 'arguments'.
(faba-icon-theme): Remove 'bootstrap.
(arc-icon-theme): Remove 'arguments'.
* gnu/packages/gnunet.scm (guile-gnunet): Likewise.
* gnu/packages/gtk.scm (guile-rsvg): Likewise.
* gnu/packages/guile.scm (mcron2): Remove 'bootstrap.
(guile-bash): Remove #:phases.
(guile-git): Remove 'bootstrap.
(guile-syntax-highlight): Remove 'arguments'.
(guile-sjson): Likewise.
* gnu/packages/java.scm (classpath-devel): Remove 'bootstrap.
* gnu/packages/kodi.scm (libdvdnav/kodi)
(libdvdread/kodi, libdvdcss/kodi): Likewise.
* gnu/packages/libreoffice.scm (hunspell): Remove 'arguments'.
* gnu/packages/libusb.scm (hidapi): Likewise.
* gnu/packages/linux.scm (bridge-utils): Rename 'bootstrap' to
'patch-stuff'; move it before 'bootstrap', without autoreconf
invocation.
(eudev): Rename 'bootstrap' to 'patch-file-names', without 'autogen.sh'
invocation; move it before 'bootstrap.
(gpm): Replace 'bootstrap'.
(f2fs-tools): Remove 'arguments'.
(rng-tools): Remove #:phases.
* gnu/packages/messaging.scm (hexchat): Rename 'bootstrap' to
'copy-intltool-makefile'; remove "autoreconf" invocation and move before
'bootstrap'.
(libmesode): Remove 'arguments'.
(libstrophe): Likewise.
* gnu/packages/microcom.scm (microcom): Likewise.
* gnu/packages/networking.scm (libnet): Remove 'bootstrap.
* gnu/packages/onc-rpc.scm (libnsl): Remove 'arguments'.
* gnu/packages/package-management.scm (guix): Replace 'bootstrap.
* gnu/packages/sawfish.scm (librep): Remove 'arguments'.
* gnu/packages/version-control.scm (findnewest): Likewise.
* gnu/packages/video.scm (liba52, handbrake, motion): Replace
'bootstrap.
* gnu/packages/web.scm (fcgiwrap): Remove #:phases.
(tidy): Replace 'bootstrap.
(gumbo-parser): Remove #:phases.
* gnu/packages/wget.scm (wget2): Replace 'bootstrap.
* gnu/packages/wm.scm (i3lock-color): Remove #:phases.
* gnu/packages/xdisorg.scm (xclip): Likewise.
* gnu/packages/xml.scm (libxls): Replace 'bootstrap'.
* gnu/packages/xorg.scm (xf86-video-freedreno)
(xf86-video-intel): Remove #:phases.
* gnu/packages/zile.scm (zile-on-guile): Replace 'bootstrap.
 2018-03-11 22:04:40 +01:00
Marius Bakke
7fa9cca84a
gnu: rocksdb: Update to 5.10.4. 
* gnu/packages/databases.scm (rocksdb): Update to 5.10.4.
[source]: Substitute the unbundled copy of GNU Parallel.
[arguments]: Add "V=1" "USE_RTTI=1" and
"ROCKSDBTESTS_END=db_tailing_iter_test" to #:make-flags.  Set #:test-target to
"check_some".  Respect parallel jobs in 'build-release-libraries' phase and
rename to 'build'.
[license]: Update for changes in 5.5.4.
 2018-03-04 17:54:39 +01:00
Efraim Flashner
c553b08b49
gnu: python-apsw: Use invoke. 
* gnu/packages/databases.scm (python-apsw)[arguments]: Use invoke.
 2018-03-04 12:05:14 +02:00
Efraim Flashner
f5c847ebd0
gnu: python-apsw: Declare a source file-name. 
* gnu/packages/databases.scm (python-apsw)[source]: Declare a source
file-name.
 2018-03-04 12:05:14 +02:00
Leo Famulari
703a8b7dc5
gnu: postgresql@9.6: Update to 9.6.8 [fixes CVE-2018-1058]. 
* gnu/packages/databases.scm (postgresql-9.6): Update to 9.6.8.
 2018-03-01 20:01:48 -05:00
Leo Famulari
bb17b2be49
gnu: postgresql: Update to 10.3 [fixes CVE-2018-1058]. 
* gnu/packages/databases.scm (postgresql): Update to 10.3.
 2018-03-01 20:01:48 -05:00
Leo Famulari
e9802319f7
gnu: memcached: Update to 1.5.6. 
* gnu/packages/databases.scm (memcached): Update to 1.5.6.
 2018-03-01 20:00:12 -05:00
Ricardo Wurmus
29c9c9c2c1
gnu: r-rmysql: Update to 0.10.14. 
* gnu/packages/databases.scm (r-rmysql): Update to 0.10.14.
 2018-03-01 21:28:53 +01:00
Marius Bakke
ff856cfdcc
gnu: python-pickleshare: Run the tests. 
* gnu/packages/databases.scm (python-pickleshare)[arguments]: Replace CHECK-PHASE.
[native-inputs]: Add PYTHON-PYTEST.
 2018-02-26 04:50:30 +01:00
Marius Bakke
ed519b3c1f
gnu: python-pickleshare: Update to 0.7.4. 
* gnu/packages/databases.scm (python-pickleshare): Update to 0.7.4.
[source](uri): Use PYPI-URI.
[propagated-inputs]: Remove.
[properties]: Delay python2 variant.
(python2-pickleshare)[propagated-inputs]: Add PYTHON2-PATHLIB2.
 2018-02-26 04:49:52 +01:00
Ludovic Courtès
cff07bde98
gnu: sqlite: Fix source URL. 
* gnu/packages/databases.scm (sqlite)[source]: Change "/2017" to
"/2018".
 2018-02-24 23:11:49 +01:00
Marius Bakke
eaa7b9664e
gnu: gdbm: Update to 1.14. 
* gnu/packages/databases.scm (gdbm): Update to 1.14.
 2018-02-20 19:54:24 +01:00
Marius Bakke
e83f62f947
gnu: sqlite: Update to 3.22.0. 
* gnu/packages/databases.scm (sqlite): Update to 3.22.0.
 2018-02-20 16:01:46 +01:00
Mark H Weaver
150062f190
Merge branch 'master' into core-updates 2018-02-16 13:14:26 -05:00
Tobias Geerinckx-Rice
8c078ddec4
gnu: perl-dbd-pg: Update to 3.7.4. 
* gnu/packages/databases.scm (perl-dbd-pg): Update to 3.7.4.
 2018-02-16 11:15:02 +01:00
Mark H Weaver
efe2a2833c
Merge branch 'master' into core-updates 2018-02-09 01:46:34 -05:00
Leo Famulari
2c433a1612
gnu: postgresql: Update to 10.2 [CVE-2018-{1052,1053}]. 
* gnu/packages/databases.scm (postgresql): Update to 10.2.
 2018-02-08 17:47:52 -05:00
Mark H Weaver
e7ca634912
Merge branch 'master' into core-updates 2018-02-03 22:46:07 -05:00
Christopher Baines
9b32bf6e6c
gnu: Fix and improve the mongo-tools package. 
The hash of the source for this package is wrong. Most probably because the
source was changed from a tarball to a git repository without updating the
hash. Fixing this seems to break the check phase, so I rewrote that as well,
making changes to the build and install phases as needed.

* gnu/packages/databases.scm (mongo-tools)[source]: Update the hash value.
  [arguments]: Remove the different unpack path, as this isn't necessary when
  using the git repository as a source. Move the list of tools to make it
  accessible from multiple phases. Rewrite the build phase, getting it to
  install the tools in to the location the tests seem to expect to find
  them. Replace the check phase to run the tests for each tool
  individually. Add an install phase to install the tools, now that go install
  is not being run in the build phase.
  [native-inputs]: Add go-github.com-smartystreets-goconvey as a native-input
  as this is required for running the tests.
 2018-02-01 20:21:25 +00:00
Marius Bakke
bee7bb315c
Merge branch 'master' into core-updates 2018-02-01 13:18:47 +01:00
Christopher Baines
33c88fcb25
gnu: Add mongo-tools. 
* gnu/packages/databases.scm (mongo-tools): New variable.
 2018-01-30 07:41:31 +00:00
Christopher Baines
5807172300
gnu: Add go-gopkg.in-mgo.v2. 
* gnu/packages/databases.scm (go-gopkg.in-mgo.v2): New variable.
 2018-01-30 07:41:30 +00:00
Mark H Weaver
b9ed5ef3fb
gnu: Add sqlite-with-fts5. 
* gnu/packages/databases.scm (sqlite-with-fts5): New variable.
 2018-01-28 00:23:32 -05:00
Mark H Weaver
b89d8a4271
Merge branch 'master' into core-updates 2018-01-26 00:15:26 -05:00
Tobias Geerinckx-Rice
bbf9092b9d
gnu: 4store: Update URI. 
* gnu/packages/databases.scm (4store)[source, home-page]: Update URI.
 2018-01-26 00:09:19 +01:00
Mark H Weaver
e074a655dd
Merge branch 'master' into core-updates 2018-01-19 23:59:20 -05:00
Efraim Flashner
8d7b476ba9
gnu: mongodb: Fix indentation. 
* gnu/packages/databases.scm (mongodb): Replace tabs with spaces.
 2018-01-18 15:12:04 +02:00
Efraim Flashner
7f6a607e2a
gnu: mysql: Update to 5.7.21. 
* gnu/packages/databases.scm (mysql): Update to 5.7.21.
 2018-01-18 15:12:02 +02:00
Christopher Baines
0076f5a98c
gnu: Remove redundant wrapping from packages using ruby-build-system. 
Now that the build system does wrapping automatically, it can be removed from
the packages that do it manually.

* gnu/packages/databases.scm (es-dump-restore)[arguments]: Remove #:phases.
* gnu/packages/ruby.scm (ruby-redcloth)[arguments]: Remove #:phases.
  (ruby-httpclient)[arguments]: Remove 'wrap-bin-httpclient from the modified
  phases.
 2018-01-14 22:16:26 +00:00
Christopher Baines
3cb3fa6747
guix: build: ruby-build-system: Install to the vendor directory 
* guix/build/ruby-build-system.scm (install): Install gems to the vendor
  directory, rather than the GEM_HOME. The vendor directory does not include
  the version of ruby used to install the gem in the path, which makes it
  easier to add it to the GEM_PATH for all versions of ruby to use.
  (gem-home): Remove procedure.
* gnu/packages/ruby.scm (ruby, ruby-2.1)[native-search-paths]: Switch to
  lib/ruby/vendor_ruby.
  (ruby-1.8)[native-search-paths]: Remove native-search-paths.
  (gem-directory): Remove procedure.
  (ruby-ansi, ruby-ae)[arguments]: Remove use of gem-directory.
  (ruby-metaclass, ruby-instantiator, ruby-introspection, ruby-mocha,
  ruby-nokogiri, ruby-minitest-tu-shim, ruby-redcloth)[arguments]: Remove use
  of gem-home.
  (ruby-git, ruby-httpclient)[arguments]: Remove use of GEM_HOME.
* gnu/packages/databases.scm (es-dump-restore)[arguments]: Remove use of
  GEM_HOME.
 2018-01-14 22:16:08 +00:00
Leo Famulari
4adb40bffc
Merge branch 'master' into core-updates 2018-01-11 14:22:50 -08:00
amirouche
3926a099b4
gnu: guile-wiredtiger: Update to 0.6.3. 
* gnu/package/databases.scm (guile-wiredtiger): Update to 0.6.3.
[arguments]: Enable tests; disable parallel tests; remove
'remove-bundled-dependencies' phase.
[synopsis, description]: Improve them.

Signed-off-by: Kei Kebreau <kkebreau@posteo.net>
 2018-01-08 12:46:53 -05:00
Efraim Flashner
23de2e1d5f
Merge remote-tracking branch 'origin/master' into core-updates 2017-12-31 14:10:25 +02:00
Christopher Baines
90205b625e
gnu: Run some tests in the mongodb package check phase. 
Previously the mongodb dbtests and unittests were only built, and not actually
run.

* gnu/packages/databases.scm (mongodb)[native-inputs]: Add python2-minimal,
  python2-pymongo and python2-pyyaml for running the resmoke.py program, and
  add tzdata as some tests fail without this.
  [arguments]: Run the tests through the resmoke.py script in the check phase,
  set TZDIR as a couple of tests seem to depend on this, add a comment about
  the resource requirements of the tests, as they require a large amount of
  disk space, and disable the async_stream_test, as it seems to hang.
 2017-12-27 13:28:34 +00:00
Christopher Baines
a469c69508
gnu: Build wiredtiger with builtin compressors. 
WiredTiger is used by MongoDB, and it seems to require it to be built with
builtin support for snappy compression.

* gnu/packages/databases.scm (wiredtiger)[arguments]: Replace --enable-zlib
  and --enable-snappy with --with-builtins=snappy,zlib.
 2017-12-27 13:28:24 +00:00
Tobias Geerinckx-Rice
53ae35e443
gnu: python-sqlalchemy-utils: Update to 0.32.21. 
* gnu/packages/databases.scm (python-sqlalchemy-utils): Update to 0.32.21.
 2017-12-26 16:44:52 +01:00
Tobias Geerinckx-Rice
bcdc5caed7
gnu: python-sadisplay: Update to 0.4.8. 
* gnu/packages/databases.scm (python-sadisplay): Update to 0.4.8.
 2017-12-26 16:43:57 +01:00
Tobias Geerinckx-Rice
a7f27da7f2
gnu: check, databases: Use HTTPS for bitbucket.org. 
* gnu/packages/check.scm (python-pytest-capturelog)[home-page]: Likewise.
* gnu/packages/databases.scm (python-alembic)[home-page]: Likewise.
 2017-12-26 02:27:42 +01:00
Tobias Geerinckx-Rice
08455a3464
gnu: python-redis: Update to 2.10.6. 
* gnu/packages/databases.scm (python-redis): Update to 2.10.6.
 2017-12-26 02:03:41 +01:00
Tobias Geerinckx-Rice
030274ccac
gnu: python-alembic: Update to 0.9.6. 
* gnu/packages/databases.scm (python-alembic): Update to 0.9.6.
 2017-12-26 02:03:41 +01:00
Christopher Baines
3faa422d5f
gnu: Build wiredtiger with snappy support. 
This is probably necessary to get the MongoDB package in Guix to successfully
use the Guix wiredtiger package, as MongoDB it uses wiredtiger with snappy by
default.

* gnu/packages/databases.scm (wiredtiger)[arguments]: Add --enable-snappy to
  #:configure-flags.
  [inputs]: Add snappy.
 2017-12-22 19:23:53 +00:00
Leo Famulari
0054564b85
gnu: mariadb: Update to 10.1.29. 
* gnu/packages/databases.scm (mariadb): Update to 10.1.29.
 2017-12-22 10:53:50 -05:00
Marius Bakke
32cd878be0
Merge branch 'master' into core-updates 2017-12-19 01:42:40 +01:00
Efraim Flashner
439980b707
gnu: perl-sql-abstract: Update source uri. 
* gnu/packages/databases.scm (perl-sql-abstract)[source]: Update source uri.
 2017-12-10 11:35:28 +02:00
Marius Bakke
9e111db453
Merge branch 'master' into core-updates 2017-12-07 18:26:11 +01:00
Tobias Geerinckx-Rice
b10ac21511
gnu: perl-dbd-pg: Update to 3.7.0. 
* gnu/packages/databases.scm (perl-dbd-pg): Update to 3.7.0
 2017-12-07 02:59:24 +01:00
Tobias Geerinckx-Rice
47b059197d
gnu: perl-sql-abstract: Update to 1.84. 
* gnu/packages/databases.scm (perl-sql-abstract): Update to 1.84
 2017-12-07 02:59:24 +01:00
Tobias Geerinckx-Rice
b2b995622a
gnu: perl-dbix-class-schema-loader: Update to 0.07047. 
* gnu/packages/databases.scm (perl-dbix-class-schema-loader): Update to
0.07047
 2017-12-07 02:59:17 +01:00
Tobias Geerinckx-Rice
84a0008ae7
gnu: perl-dbi: Update to 1.637. 
* gnu/packages/databases.scm (perl-dbi): Update to 1.637
 2017-12-07 02:57:28 +01:00
Marius Bakke
77181815ae
Merge branch 'master' into core-updates 2017-12-05 23:41:30 +01:00
Arun Isaac
6e385b76e6
gnu: mongodb: Use scons-build-system. 
* gnu/packages/databases.scm (mongodb): Switch to scons-build-system.
 2017-11-30 18:21:23 +05:30
Efraim Flashner
51b0f09e05
gnu: mongodb: Remove some bundled sources. 
* gnu/packages/databases.scm (mongodb)[source]: Add snippet to remove
some of the bundled sources.
[input]: Remove unused boost input.
 2017-11-26 14:16:08 +02:00
Efraim Flashner
319b52c382
gnu: mongodb: Use system wiredtiger when available. 
* gnu/packages/databases.scm (mongodb)[inputs]: Add wiredtiger on
64-bit systems.
[arguments]: When using wiredtiger, use system wiredtiger.
 2017-11-26 14:16:08 +02:00
Efraim Flashner
29cfbfca43
gnu: mongodb: Build without wiredtiger on 32-bit systems. 
* gnu/packages/databases.scm (mongodb)[arguments]: Add a configure-flag
to build without wiredtiger support on 32-bit systems.
 2017-11-26 14:16:04 +02:00
Leo Famulari
f1c49e75f4
gnu: mongodb: Update to 3.4.10. 
* gnu/packages/databases.scm (mongodb): Update to 3.4.10.
 2017-11-25 20:28:11 -05:00
Danny Milosavljevic
41916bea1b
gnu: Add python-pyodbc. 
* gnu/packages/databases.scm (python-pyodbc, python2-pyodbc): New variables.
 2017-11-20 20:47:59 +01:00
Marius Bakke
2dd12924cf
Merge branch 'master' into core-updates 2017-11-19 15:01:00 +01:00
Ricardo Wurmus
a8714bf680
gnu: Move database packages from python.scm to databases.scm. 
* gnu/packages/python.scm (python-ccm, python2-ccm, python2-pysqlite,
python-sqlalchemy, python2-sqlalchemy, python-sqlalchemy-utils,
python2-sqlalchemy-utils, python-alembic, python2-alembic,
python-pickleshare, python2-pickleshare, python-apsw, python2-apsw,
python2-neo4j-driver, python2-py2neo, python-psycopg2, python2-psycopg2,
python-sadisplay, python2-sadisplay, python-mysqlclient,
python2-mysqlclient, python-hiredis, python2-hiredis, python-fakeredis,
python2-fakeredis, python-redis, python2-redis, python-rq, python2-rq,
python-trollius-redis, python2-trollius-redis, python-sqlparse,
python2-sqlparse, python-sql, python2-sql): Move from here...
* gnu/packages/databases.scm: ...to here.
* gnu/packages/tryton.scm,
gnu/packages/python-web.scm,
gnu/packages/nutrition.scm,
gnu/packages/medical.scm: Adjust accordingly.
 2017-11-17 22:36:27 +01:00
Kristofer Buffington
1697307185
gnu: Add guile-wiredtiger. 
* gnu/packages/databases.scm (guile-wiredtiger): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-11-14 23:46:53 +01:00
Ricardo Wurmus
5ccde2079e
gnu: Move test packages from perl to perl-check. 
* gnu/packages/perl.scm (perl-test2-bundle-extended,
perl-test2-plugin-nowarnings, perl-test-base, perl-test-class,
perl-test-class-most, perl-test-cleannamespaces, perl-test-command,
perl-test-cpan-meta, perl-test-cpan-meta-json, perl-test-deep,
perl-test-differences, perl-test-directory, perl-test-eol,
perl-test-exception, perl-test-fatal, perl-test-file-sharedir-dist,
perl-test-files, perl-test-harness, perl-test-leaktrace,
perl-test-longstring, perl-test-manifest, perl-test-memory-cycle,
perl-test-mockobject, perl-test-mocktime, perl-test-most, perl-test-needs,
perl-test-notabs, perl-test-nowarnings, perl-test-number-delta,
perl-test-output, perl-test-pod, perl-test-pod-coverage, perl-test-requires,
perl-test-script, perl-test-sharedfork, perl-test-simple, perl-test-taint,
perl-test-tester, perl-test-trap, perl-test-utf8, perl-test-warn,
perl-test-warnings, perl-test-without-module, perl-test-writevariants,
perl-test-yaml, perl-test-trailingspace): Move variables to ...
* gnu/packages/perl-check.scm: ... this new file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add it.
* gnu/packages/admin.scm,
gnu/packages/bioinformatics.scm,
gnu/packages/crypto.scm,
gnu/packages/databases.scm,
gnu/packages/glib.scm,
gnu/packages/gnupg.scm,
gnu/packages/image-viewers.scm,
gnu/packages/language.scm,
gnu/packages/networking.scm,
gnu/packages/package-management.scm,
gnu/packages/perl.scm,
gnu/packages/terminals.scm,
gnu/packages/tex.scm,
gnu/packages/version-control.scm,
gnu/packages/web.scm,
gnu/packages/xml.scm,
gnu/packages/xorg.scm: Use perl-check module.
 2017-11-13 23:03:01 +01:00
Efraim Flashner
179b7ac66d
gnu: postgresql@9.6: Update to 9.6.6 [security fixes]. 
This fixes CVE-2017-12172, CVE-2017-15098, CVE-2017-15099.

* gnu/packages/databases.scm (postgresql@9.6): Update to 9.6.6.
 2017-11-10 10:24:13 +02:00
Rutger Helling
1d8e73ba67
gnu: postgresql: Update to 10.1 [security fixes]. 
Fixes CVE-2017-12172, CVE-2017-15098 and CVE-2017-15099.

* gnu/packages/databases.scm (postgresql): Update to 10.1.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
 2017-11-10 01:22:53 +01:00
Ricardo Wurmus
74248d22a0
gnu: Add r-rmysql. 
* gnu/packages/databases.scm (r-rmysql): New variable.
 2017-11-07 08:15:43 +01:00
Marius Bakke
aa70cf8c36
gnu: redis: Update to 4.0.2. 
* gnu/packages/databases.scm (redis): Update to 4.0.2.
 2017-11-05 19:03:32 +01:00
Marius Bakke
4527a97fac
gnu: sqlite: Update to 3.21.0. 
* gnu/packages/databases.scm (sqlite): Update to 3.21.0.
 2017-11-01 23:35:12 +01:00
Efraim Flashner
eda8a841ac
Merge remote-tracking branch 'origin/python-updates' into core-updates 2017-10-26 12:45:11 +03:00
Tobias Geerinckx-Rice
b7883b111d
Merge branch 'master' into core-updates 2017-10-25 20:02:08 +02:00
Ricardo Wurmus
6a23c8b183
gnu: Add sqlite-with-fts3. 
* gnu/packages/databases.scm (sqlite-with-fts3): New variable.

Co-authored-by: Pierre Langlois <pierre.langlois@gmx.com>
 2017-10-25 15:13:38 +02:00
Marius Bakke
ca4fd41de8
Merge branch 'master' into core-updates 2017-10-24 22:00:23 +02:00
Tobias Geerinckx-Rice
57af0d13b2
gnu: python-lmdb: Update to 0.93. 
* gnu/packages/databases.scm (python-lmdb): Update to 0.93.
 2017-10-23 14:49:32 +02:00
Tobias Geerinckx-Rice
afd845368a
gnu: python-peewee: Update to 2.10.2. 
* gnu/packages/databases.scm (python-peewee): Update to 2.10.2.
 2017-10-23 14:49:31 +02:00
Marius Bakke
119a749db9
Merge branch 'master' into core-updates 2017-10-22 20:12:52 +02:00
Leo Famulari
48f8b07082
gnu: mysql: Update to 5.7.20. 
* gnu/packages/databases.scm (mysql): Update to 5.7.20.
 2017-10-20 15:36:42 -04:00
Marius Bakke
928da609b5
gnu: Remove python-pytest@2. 
* gnu/packages/python.scm (python-pytest): Update to 3.0.7.
[source]: Move substitution to ...
[arguments]: ... here. Incorporate phase from pytest-3.0.
[native-inputs]: Add PYTHON-HYPOTHESIS.
(python-pytest-3.0): Remove variable.
(python2-pytest-3.0): Rename to ...
(python2-pytest): ... this.
[native-inputs]: Add PYTHON2-ENUM34.
* gnu/packages/backup.scm (borg)[native-inputs]: Replace PYTHON-PYTEST-3.0
with PYTHON-PYTEST.
* gnu/packages/calendar.scm (khal): Likewise.
* gnu/packages/databases.scm (python-orator): Likewise.
* gnu/packages/python.scm (python-sphinx-1.6, python-sphinx-1.5.3,
python-pexpect, python-cryptography, python-pyopenssl, python-pytest-warnings,
python-pytest-capturelog, python-pytest-catchlog, python-marshmallow,
python-apispec, python-flasgger, python-pyjwt, python-grako,
python-honcho): Likewise.
* gnu/packages/web.scm (python-internetarchive): Likewise.
 2017-10-19 00:16:49 +02:00
Thomas Danckaert
8cff2e7aed
Merge 'master' into core-updates 2017-10-16 19:52:30 +02:00
Efraim Flashner
7658d89bb7
gnu: Add postgresql@9.6. 
* gnu/packages/databases.scm (postgresql@9.6): New variable.
 2017-10-12 23:39:35 +03:00
Marius Bakke
c01ef97594
Merge branch 'master' into core-updates 2017-10-10 22:33:28 +02:00
Marius Bakke
1c055d7258
Merge branch 'staging' 2017-10-10 21:44:32 +02:00
Rutger Helling
231123ee16
gnu: postgresql: Update to 10.0. 
* gnu/packages/databases.scm (postgresql): Update to 10.0.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2017-10-10 10:33:26 -04:00
Marius Bakke
ad3a937dae
Merge branch 'master' into staging 2017-10-07 12:54:40 +02:00
Christopher Baines
6bbbca9073
gnu: Add mongodb. 
* gnu/packages/databases.scm (mongodb): New variable.
 2017-10-06 21:24:23 +01:00
Marius Bakke
7716ccd59c
Merge branch 'master' into staging 2017-10-05 00:45:38 +02:00
Efraim Flashner
48b68c6178
gnu: virtuoso-ose: Limit to 64-bit platforms. 
* gnu/packages/databases.scm (virtuoso-ose)[supported-systems]: New field.
 2017-10-04 10:51:19 +03:00
Roel Janssen
61ce0998e0
gnu: Add virtuoso-ose. 
* gnu/packages/databases.scm (virtuoso-ose): New variable.
 2017-10-03 15:36:05 +02:00
Efraim Flashner
64df08f0cf
Merge remote-tracking branch 'origin/master' into core-updates 2017-10-01 22:16:22 +03:00
Christopher Baines
afcbb02057
gnu: Add ruby-es-dump-restore. 
* gnu/packages/databases.scm (es-dump-restore): New variable.
 2017-09-30 11:46:10 +01:00
Marius Bakke
595dcd48a9
gnu: bdb: Update to 6.2.32. 
* gnu/packages/databases.scm (bdb): Update to 6.2.32.
 2017-09-21 20:33:56 +02:00
Kei Kebreau
dc1d3cdef7
gnu: Use 'modify-phases' syntax. 
* gnu/packages/admin.scm (mingetty, clusterssh, wpa-supplicant-minimal,
wpa-supplicant, wakelan, acpica, tree, direvent, dstat)[arguments]: Use
'modify-phases' syntax.
* gnu/packages/algebra.scm (arb)[arguments]: Likewise.
* gnu/packages/apr.scm (apr-util)[arguments]: Likewise.
* gnu/packages/audio.scm (clalsadrv, fluidsynth, faad2, lv2-mda-piano,
lv2-mda-epiano, timidity++, vamp, soundtouch, portaudio, rsound,
zita-convolver, zita-alsa-pcmi)[arguments]: Likewise.
* gnu/packages/backup.scm (rdup, btar)[arguments]: Likewise.
* gnu/packages/bioinformatics.scm (bedops, bwa, crossmap, express,
flexbar, grit, hisat, ngs-sdk, subread)[arguments]: Likewise.
* gnu/packages/bittorrent.scm (transmission)[arguments]: Likewise.
* gnu/packages/cdrom.scm (cd-discid)[arguments]: Likewise.
* gnu/packages/compression.scm (sharutils)[arguments]: Likewise.
* gnu/packages/conky.scm (conky)[arguments]: Likewise.
* gnu/packages/databases.scm (bdb, bdb-5.3)[arguments]: Likewise.
* gnu/packages/debug.scm (delta, c-reduce)[arguments]: Likewise.
* gnu/packages/display-managers.scm (slim)[arguments]: Likewise.
* gnu/packages/dns.scm (dnsmasq)[arguments]: Likewise.
* gnu/packages/emacs.scm (geiser, emacs-wget, bbdb)[arguments]: Likewise.
* gnu/packages/engineering.scm (pcb)[arguments]: Likewise.
* gnu/packages/firmware.scm (ath9k-htc-firmware)[arguments]: Likewise.
* gnu/packages/flashing-tools.scm (flashrom)[arguments]: Likewise.
* gnu/packages/fltk.scm (fltk)[arguments]: Likewise.
* gnu/packages/freedesktop.scm (python-pyxdg)[arguments]: Likewise.
* gnu/packages/gd.scm (perl-gd)[arguments]: Likewise.
* gnu/packages/gkrellm.scm (gkrellm)[arguments]: Likewise.
* gnu/packages/glib.scm (glibmm)[arguments]: Likewise.
* gnu/packages/gl.scm (glew)[arguments]: Likewise.
* gnu/packages/gnome.scm (icon-naming-utils, orbit2, libbonobo, gnome-vfs,
libgnome, libbonoboui, goffice-0.8, dconf)[arguments]: Likewise.
* gnu/packages/gprolog.scm (gprolog)[arguments]: Likewise.
* gnu/packages/gps.scm (gpscorrelate)[arguments]: Likewise.
* gnu/packages/graphics.scm (agg)[arguments]: Likewise.
* gnu/packages/gtk.scm (ganv, girara, gtksourceview-2, guile-present,
python2-pycairo)[arguments]: Likewise.
* gnu/packages/guile.scm (guile-1.8)[arguments]: Likewise.
* gnu/packages/guile-wm.scm (guile-wm)[arguments]: Likewise.
* gnu/packages/hugs.scm (hugs)[arguments]: Likewise.
* gnu/packages/hurd.scm (gnumach-headers, hurd-headers, hurd-minimal)
[arguments]: Likewise.
* gnu/packages/image-viewers.scm (feh, sxiv)[arguments]: Likewise.
* gnu/packages/libcanberra.scm (libcanberra)[arguments]: Likewise.
* gnu/packages/linux.scm (bridge-utils, iw, fuse, unionfs-fuse/static,
lm-sensors, i2c-tools, xsensors, perf, mdadm, libaio, module-init-tools)
[arguments]: Likewise.
* gnu/packages/lisp.scm (ccl)[arguments]: Likewise.
* gnu/packages/lout.scm (lout)[arguments]: Likewise.
* gnu/packages/lua.scm (luajit)[arguments]: Likewise.
* gnu/packages/machine-learning.scm (shogun)[arguments]: Likewise.
* gnu/packages/mail.scm (exim)[arguments]: Likewise.
* gnu/packages/man.scm (man-pages, txt2man)[arguments]: Likewise.
* gnu/packages/maths.scm (lapack, superlu-dist, openlibm, openspecfun)
[arguments]: Likewise.
* gnu/packages/messaging.scm (bitlbee)[arguments]: Likewise.
* gnu/packages/mp3.scm (libmad, id3lib, mp3info)[arguments]: Likewise.
* gnu/packages/music.scm (solfege)[arguments]: Likewise.
* gnu/packages/noweb.scm (noweb)[arguments]: Likewise.
* gnu/packages/patchutils.scm (patchutils, quilt, colordiff)[arguments]:
Likewise.
* gnu/packages/pdf.scm (xpdf, zathura-cb, zathura-ps, zathura-djvu,
zathura-pdf-poppler, zathura, podofo, fbida)[arguments]: Likewise.
* gnu/packages/perl.scm (perl-file-list, perl-test-harness)[arguments]:
Likewise.
* gnu/packages/photo.scm (gphoto2)[arguments]: Likewise.
* gnu/packages/popt.scm (popt)[arguments]: Likewise.
* gnu/packages/pretty-print.scm (source-highlight, astyle)[arguments]:
Likewise.
* gnu/packages/pumpio.scm (pumpa)[arguments]: Likewise.
* gnu/packages/python.scm (python-passlib, python-pycrypto, python2-empy,
python-sqlalchemy, python-docopt)[arguments]: Likewise.
* gnu/packages/rdf.scm (lrdf)[arguments]: Likewise.
* gnu/packages/regex.scm (tre)[arguments]: Likewise.
* gnu/packages/rrdtool.scm (rrdtool)[arguments]: Likewise.
* gnu/packages/ruby.scm (ruby-2.1, ruby-1.8)[arguments]: Likewise.
* gnu/packages/sawfish.scm (sawfish)[arguments]: Likewise.
* gnu/packages/scheme.scm (racket)[arguments]: Likewise.
* gnu/packages/sdl.scm (guile-sdl)[arguments]: Likewise.
* gnu/packages/serveez.scm (serveez)[arguments]: Likewise.
* gnu/packages/skribilo.scm (skribilo)[arguments]: Likewise.
* gnu/packages/smalltalk.scm (smalltalk)[arguments]: Likewise.
* gnu/packages/suckless.scm (dmenu, slock)[arguments]: Likewise.
* gnu/packages/tcl.scm (expect)[arguments]: Likewise.
* gnu/packages/telephony.scm (commoncpp)[arguments]: Likewise.
* gnu/packages/textutils.scm (recode, libgtextutils)[arguments]:
Likewise.
* gnu/packages/time.scm (time)[arguments]: Likewise.
* gnu/packages/tor.scm (privoxy)[arguments]: Likewise.
* gnu/packages/uucp.scm (uucp)[arguments]: Likewise.
* gnu/packages/video.scm (libdvdnav-4)[arguments]: Likewise.
* gnu/packages/web-browsers.scm (lynx)[arguments]: Likewise.
* gnu/packages/web.scm (tinyproxy)[arguments]: Likewise.
* gnu/packages/wicd.scm (wicd)[arguments]: Likewise.
* gnu/packages/wm.scm (bspwm)[arguments]: Likewise.
* gnu/packages/xdisorg.scm (sxhkd, xcape)[arguments]: Likewise.
* gnu/packages/xfce.scm (xfconf)[arguments]: Likewise.
* gnu/packages/xfig.scm (transfig)[arguments]: Likewise.
* gnu/packages/xorg.scm (imake)[arguments]: Likewise.
 2017-09-20 20:58:04 -04:00
Ben Woodcroft
da1f7a9e16
gnu: python-orator: Move to (gnu packages databases). 
* gnu/packages/python.scm: Remove (gnu packages time) import.
(python-orator, python2-orator): Move from here ...
* gnu/packages/databases.scm: ... to here.
 2017-09-17 11:07:46 +10:00
Jelle Licht
accf6c6acc
gnu: sqlite: Update to 3.20.1. 
* gnu/packages/databases.scm (sqlite): Update to 3.20.1.
 2017-09-11 16:29:50 +02:00
Kei Kebreau
d10092b849
gnu: Put autoconf-related phases immediately after the 'unpack phase. 
* gnu/packages/audio.scm (audacity, rtmidi)[arguments]: Correct phases
accordingly.
* gnu/packages/bioinformatics.scm (mash, seek, vsearch, emboss,
htslib-for-sambamba)[arguments]: Likewise.
* gnu/packages/ci.scm (cuirass)[arguments]: Likewise.
* gnu/packages/compression.scm (minizip, xdelta)[arguments]: Likewise.
* gnu/packages/cpp.scm (libzen)[arguments]: Likewise.
* gnu/packages/crypto.scm (opendht)[arguments]: Likewise.
* gnu/packages/databases.scm (4store, mdbtools)[arguments]: Likewise.
* gnu/packages/debug.scm (stress-make)[arguments]: Likewise.
* gnu/packages/dns.scm (dnscrypt-proxy, dnscrypt-wrapper)[arguments]:
Likewise.
* gnu/packages/emacs.scm (emacs-pdf-tools)[arguments]: Likewise.
* gnu/packages/embedded.scm (libjaylink, openocd)[arguments]: Likewise.
* gnu/packages/engineering.scm (gerbv)[arguments]: Likewise.
* gnu/packages/erlang.scm (erlang)[arguments]: Likewise.
* gnu/packages/ftp.scm (weex)[arguments]: Likewise.
* gnu/packages/gnome.scm (dia)[arguments]: Likewise.
* gnu/packages/gnunet.scm (gnurl, guile-gnunet)[arguments]: Likewise.
* gnu/packages/gtk.scm (guile-rsvg, graphene)[arguments]: Likewise.
* gnu/packages/guile.scm (guildhall, guile-ics, guile-sqlite3)[arguments]:
Likewise.
* gnu/packages/ibus.scm (ibus-libpinyin)[arguments]: Likewise.
* gnu/packages/irc.scm (weechat)[arguments]: Likewise.
* gnu/packages/java.scm (classpath-devel)[arguments]: Likewise.
* gnu/packages/libreoffice.scm (libetonyek)[arguments]: Likewise.
* gnu/packages/libusb.scm (hidapi)[arguments]: Likewise.
* gnu/packages/linux.scm (gpm)[arguments]: Likewise.
* gnu/packages/logging.scm (glog)[arguments]: Likewise.
* gnu/packages/machine-learning.scm (ghmm)[arguments]: Likewise.
* gnu/packages/mail.scm (dovecot-trees, dovecot-libsodium-plugin, esmtp)
[arguments]: Likewise.
* gnu/packages/messaging.scm (freetalk, libmesode, libstrophe)[arguments]:
Likewise.
* gnu/packages/microcom.scm (microcom)[arguments]: Likewise.
* gnu/packages/ocaml.scm (ocaml-ssl)[arguments]: Likewise.
* gnu/packages/parallel.scm (slurm)[arguments]: Likewise.
* gnu/packages/pdf.scm (libharu)[arguments]: Likewise.
* gnu/packages/samba.scm (cifs-utils)[arguments]: Likewise.
* gnu/packages/serialization.scm (msgpack)[arguments]: Likewise.
* gnu/packages/shells.scm (scsh)[arguments]: Likewise.
* gnu/packages/telephony.scm (libiax2)[arguments]: Likewise.
* gnu/packages/textutils.scm (dotconf)[arguments]: Likewise.
* gnu/packages/version-control.scm (findnewest)[arguments]: Likewise.
* gnu/packages/video.scm (libmediainfo, mediainfo)[arguments]: Likewise.
 2017-09-04 00:10:59 -04:00
Efraim Flashner
7d099cbe13
gnu: mysql: Enable tests on aarch64. 
* gnu/packages/databases.scm (mysql)[arguments]: Remove logic disabling
the tests on aarch64-linux.
 2017-09-01 10:50:39 +03:00
Marius Bakke
ff54f194f3
gnu: postgresql: Update to 9.6.5. 
* gnu/packages/databases.scm (postgresql): Update to 9.6.5.

Release-notes: https://www.postgresql.org/docs/9.6/static/release-9-6-5.html
 2017-08-31 21:34:20 +02:00
Marius Bakke
fab46af832
gnu: tdb: Update to 1.3.15. 
* gnu/packages/databases.scm (tdb): Update to 1.3.15.
 2017-08-27 15:07:21 +02:00
Marius Bakke
2f837cf7fe
gnu: perl: Add more missing dependencies on Module::Install. 
* gnu/packages/databases.scm (perl-dbix-class, perl-dbix-class-cursor-cached,
  perl-dbix-class-introspectablem2m,
  perl-dbix-class-schema-loader)[native-inputs]: Add PERL-MODULE-INSTALL.
* gnu/packages/web.scm (perl-catalyst-action-renderview,
  perl-catalyst-action-rest, perl-catalyst-authentication-store-dbix-class,
  perl-catalyst-component-instancepercontext, perl-catalyst-model-dbic-schema,
  perl-catalyst-plugin-authentication,
  perl-catalyst-plugin-authorization-roles, perl-catalyst-plugin-configloader,
  perl-catalyst-plugin-session, perl-catalyst-plugin-session-state-cookie,
  perl-catalyst-plugin-stacktrace, perl-catalyst-plugin-static-simple,
  perl-catalyst-traitfor-request-proxybase, perl-catalyst-view-download,
  perl-catalyst-view-json, perl-catalystx-script-server-starman,
  perl-test-www-mechanize, perl-test-www-mechanize-catalyst)[native-inputs]:
  Likewise.
* gnu/packages/xorg.scm (perl-x11-xcb)[native-inputs]: Likewise.
 2017-08-25 22:24:10 +02:00
Marius Bakke
2718a9cd09
Merge branch 'master' into core-updates 2017-08-21 02:40:37 +02:00
Alex Vong
f30ff28b96
gnu: mariadb: Update to 10.1.26 [fixes CVE-2017-{3636,3641,3653}]. 
* gnu/packages/databases.scm (mariadb): Update to 10.1.26.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2017-08-17 11:40:29 -04:00
Mark H Weaver
3785e42e52
Merge branch 'master' into core-updates 2017-08-11 03:49:24 -04:00
Marius Bakke
1a1558e88f
gnu: postgresql: Update to 9.6.4 [fixes CVE-2017-{7546,7547,7548}]. 
See <https://www.postgresql.org/about/news/1772/> for more information.

* gnu/packages/databases.scm (postgresql): Update to 9.6.4.
 2017-08-10 22:23:31 +02:00
Marius Bakke
aa9780daf9
Merge branch 'master' into core-updates 2017-08-01 23:42:28 +02:00
Marius Bakke
9dab50179a
gnu: perl: Add missing dependencies on Module::Install. 
Perl 5.26 and later does not provide this module.

* gnu/packages/databases.scm (perl-sql-abstract)[native-inputs]: Add PERL-MODULE-INSTALL.
* gnu/packages/perl.scm (perl-moosex-emulate-class-accessor-fast,
perl-file-zglob, perl-object-signature, perl-test-utf8, perl-time-duration,
perl-benchmark-timer, perl-class-accessor-grouped,
perl-class-c3-componentised, perl-term-encoding)[native-inputs]: Likewise.
* gnu/packages/web.scm (perl-http-parser-xs, perl-uri-template,
perl-www-curl)[native-inputs]: Likewise.
* gnu/packages/xml.scm (perl-xml-atom)[native-inputs]: Likewise.
 2017-07-30 14:55:27 +02:00
Christopher Baines
686144e986
gnu: Add memcached. 
* gnu/packages/databases.scm (memcached): New variable.
 2017-07-30 09:06:52 +01:00
Ben Woodcroft
f112bd26ae
gnu: redis: Update to 4.0.1. 
* gnu/packages/databases.scm (redis): Update to 4.0.1.
 2017-07-28 21:10:49 +10:00
Ben Woodcroft
00eeb45fca
gnu: redis: Update to 4.0.0. 
* gnu/packages/databases.scm (redis): Update to 4.0.0.
 2017-07-28 20:18:52 +10:00
Marius Bakke
e0b9e377f1
Merge branch 'master' into core-updates 2017-07-28 00:34:13 +02:00
Kei Kebreau
c7db7b86ce
gnu: perl-dbd-mysql: Fix CVE-2017-10788. 
* gnu/packages/patches/perl-dbd-mysql-CVE-2017-10788.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/databases.scm (perl-dbd-mysql)[source]: Use it.
 2017-07-25 14:11:20 -04:00
Leo Famulari
e081e2dd0b
Merge branch 'master' into core-updates 2017-07-23 19:06:49 -04:00
Marius Bakke
38bb9df150
gnu: tdb: Update to 1.3.14. 
* gnu/packages/databases.scm (tdb): Update to 1.3.14.
 2017-07-23 22:01:28 +02:00
Leo Famulari
6c1a317e29
Merge branch 'master' into core-updates 2017-07-23 03:42:12 -04:00
Leo Famulari
6f226c078c
gnu: mysql: Update to 5.7.19. 
* gnu/packages/databases.scm (mysql): Update to 5.7.19.
 2017-07-21 14:50:24 -04:00
Leo Famulari
c8eb2b8c60
Merge branch 'master' into core-updates 2017-07-10 14:37:53 -04:00
Leo Famulari
0ca1e77c14
gnu: perl-dbd-mysql: Update to 4.043. 
* gnu/packages/databases.scm (perl-dbd-mysql): Update to 4.043.
 2017-07-07 20:34:52 -04:00
Marius Bakke
a6a979cba3
gnu: mariadb: Update to 10.1.25. 
* gnu/packages/databases.scm (mariadb): Update to 10.1.25.
 2017-07-06 00:15:14 +02:00
Mark H Weaver
ed068b960e
Merge branch 'master' into core-updates 2017-06-26 00:00:58 -04:00
Tobias Geerinckx-Rice
07041d95b1
gnu: Add python-lmdb. 
* gnu/packages/databases.scm (python-lmdb, python2-lmdb): New variables.
 2017-06-21 21:58:39 +02:00
Tobias Geerinckx-Rice
fda852ff40
gnu: lmdb: Expand description. 
* gnu/packages/databases.scm (lmdb)[synopsis]: Capitalise.
[description]: Elaborate.
 2017-06-21 21:58:38 +02:00
Mark H Weaver
9d4385634d
Merge branch 'master' into core-updates 2017-06-18 02:36:51 -04:00
Marius Bakke
9d59023e6a
gnu: kyotocabinet: Disable CPU optimizations. 
* gnu/packages/databases.scm (kyotocabinet)<#:configure-flags>: Add "--disable-opt".
 2017-06-17 15:05:03 +02:00
Tobias Geerinckx-Rice
603fd6b9a1
gnu: lmdb: Update to 0.9.21. 
* gnu/packages/databases.scm (lmdb): Update to 0.9.21.
 2017-06-15 10:34:23 +02:00
Danny Milosavljevic
b7aa3f5d2e
gnu: postgresql: Enable contributed extensions. 
* gnu/packages/databases.scm (postgresql)[arguments]: Add "build-contrib",
"install-contrib" phases.  Add configure-flags.
[inputs]: Add libuuid.
 2017-06-15 09:44:17 +02:00
Marius Bakke
70eea6ea14
gnu: sqlite: Update to 3.19.3. 
This update addresses an important bug present since 3.16.0 that can cause
database corruption when auto_vacuum is enabled:

https://www.sqlite.org/src/info/fda22108

* gnu/packages/databases.scm (sqlite): Update to 3.19.3.
 2017-06-08 18:37:42 +02:00
Marius Bakke
d0c45d2d82
Merge branch 'master' into core-updates 
Conflicts:
	gnu/packages/image.scm
        (incorporated libtiff graft)
 2017-06-03 17:51:21 +02:00
Marius Bakke
607b424f13
gnu: mariadb: Update to 10.1.24. 
Release notes: https://mariadb.com/kb/en/mariadb/mariadb-10124-release-notes/

* gnu/packages/databases.scm (mariadb): Update to 10.1.24.
 2017-06-01 17:48:09 +02:00
Marius Bakke
b94d20c688
gnu: sqlite: Update to 3.19.2. 
* gnu/packages/databases.scm (sqlite): Update to 3.19.2.
 2017-05-25 19:54:20 +02:00
Ricardo Wurmus
d1a914082b
Merge branch 'master' into core-updates 2017-05-24 12:05:47 +02:00
Marius Bakke
657fb6c947
gnu: sqlite: Update to 3.19.0. 
* gnu/packages/databases.scm (sqlite): Update to 3.19.0.
 2017-05-22 20:42:51 +02:00
Marius Bakke
9bd42f1dc3
gnu: postgresql: Update to 9.6.3 [fixes CVE-2017-{7484,7485,7486}]. 
* gnu/packages/databases.scm (postgresql): Update to 9.6.3.
 2017-05-12 19:27:11 +02:00
Marius Bakke
d7b344c5cd
gnu: rocksdb: Disable tests on 32-bit systems. 
* gnu/packages/databases.scm (rocksdb)[arguments]: Make #:tests? conditional.
Delete unnecessary 'build' phase. Move portability environment variable
before check phase.
 2017-05-12 15:00:59 +02:00
Leo Famulari
6cf8e576e9
gnu: mariadb: Update to 10.1.23 [security fixes]. 
Fixes CVE-2017-{3302,3313,3308,3309,3453,3456,3464 }.

* gnu/packages/databases.scm (mariadb): Update to 10.1.23.
[arguments]: Disable features that depend on libarchive.
 2017-05-05 16:32:09 -04:00
Petter
2f3108ad03
gnu: Avoid circular dependencies by Perl license. 
* guix/licenses.scm (perl-license): New variable.
* gnu/packages/bioinformatics.scm: Change (package-license perl) to perl-license.
* gnu/packages/compression.scm: Same.
* gnu/packages/databases.scm: Same.
* gnu/packages/gd.scm: Same.
* gnu/packages/language.scm: Same.
* gnu/packages/libevent.scm: Same.
* gnu/packages/mail.scm: Same.
* gnu/packages/messaging.scm: Same.
* gnu/packages/ncurses.scm: Same.
* gnu/packages/networking.scm: Same.
* gnu/packages/photo.scm: Same.
* gnu/packages/tcl.scm: Same.
* gnu/packages/tex.scm: Same.
* gnu/packages/tls.scm: Same.
* gnu/packages/web.scm: Same.
* gnu/packages/wm.scm: Same.
* gnu/packages/xml.scm: Same.
* gnu/packages/xorg.scm: Same.
* gnu/packages/zip.scm: Same.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-05-02 23:41:14 +02:00
Arun Isaac
d39a84e80c
gnu: Add mdbtools. 
* gnu/packages/databases.scm (mdbtools): New variable.
 2017-04-27 10:15:51 +05:30
Efraim Flashner
092b7b3e69
gnu: wiredtiger: Enable building on aarch64-linux. 
* gnu/packages/databases.scm (wiredtiger)[supported-systems]: Add
aarch64-linux to supported-systems.
 2017-04-24 11:35:43 +03:00
Marius Bakke
f91c677c03
gnu: rocksdb: Don't build static library. 
* gnu/packages/databases.scm (rocksdb)[arguments]<#:phases>: Add new Makefile
substitution. Remove 'delete-static-library' phase. Adjust
'build-release-libraries' phase to match.
<#:make-flags>: Remove redundant flag.
 2017-04-15 18:51:00 +02:00
Marius Bakke
bf144793ae
gnu: rocksdb: Disable failing test. 
* gnu/packages/databases.scm (rocksdb)[arguments]<#:phases>: Add one more
test to 'disable-failing-tests' phase.
 2017-04-15 18:51:00 +02:00
Leo Famulari
ab71ea93a4
gnu: mysql: Update to 5.7.18. 
* gnu/packages/databases.scm (mysql): Update to 5.7.18.
 2017-04-14 12:53:28 -04:00
Vasile Dumitrascu
b9d38ad1bc
gnu: postgresql: Update to 9.6.2. 
* gnu/packages/databases.scm (postgresql): Update to 9.6.2.

Signed-off-by: Arun Isaac <arunisaac@systemreboot.net>
 2017-04-13 18:52:40 +05:30
Tobias Geerinckx-Rice
dd0cfb37da
gnu: perl-db-file: Update to 1.840. 
* gnu/packages/databases.scm (perl-db-file): Update to 1.840.
 2017-04-04 00:17:28 +02:00
Tobias Geerinckx-Rice
2273b75154
gnu: perl-dbd-sqlite: Update to 1.54. 
* gnu/packages/databases.scm (perl-dbd-sqlite): Update to 1.54.
 2017-04-04 00:17:28 +02:00
Tobias Geerinckx-Rice
4d40c6aab0
gnu: perl-dbd-pg: Update to 3.5.3. 
* gnu/packages/databases.scm (perl-dbd-pg): Update to 3.5.3.
 2017-04-04 00:17:28 +02:00
Marius Bakke
70800cd634
gnu: sqlite: Update to 3.18.0. 
* gnu/packages/databases.scm (sqlite): Update to 3.18.0.
 2017-04-03 16:07:32 +02:00
Marius Bakke
821072e22b
gnu: gdbm: Update to 1.13. 
* gnu/packages/databases.scm (gdbm): Update to 1.13.
 2017-04-03 14:56:52 +02:00
Marius Bakke
84157bb8bf
Merge branch 'master' into core-updates 
Most conflicts are from 6fd52309b8.
 2017-03-30 22:59:53 +02:00
Tobias Geerinckx-Rice
6fd52309b8
gnu: Use HTTPS for almost all gnu.org HOME-PAGEs. 
All HTTP gnu.org (and supported subdomain) HOME-PAGEs changed to HTTPS.
 2017-03-30 01:30:16 +02:00
Marius Bakke
2e93ee5f1b
gnu: rocksdb: Update to 5.2.1. 
* gnu/packages/databases.scm (rocksdb): Update to 5.2.1.
 2017-03-28 17:02:04 +02:00
Efraim Flashner
b4f67b7ebb
gnu: mysql: Disable tests on aarch64-linux. 
* gnu/packages/databases.scm (mysql)[arguments]: Disable the test suite
on aarch64-linux.
 2017-03-28 09:34:38 +03:00
Marius Bakke
5ac097e28c
gnu: libpqxx: Fix build with newer sed. 
* gnu/packages/databases.scm (libpqxx)[arguments]: Add 'fix-sed-command' phase
that corrects a typo in the configure script.
 2017-03-26 09:16:04 +02:00
Marius Bakke
4b7e5c1131
Merge branch 'master' into core-updates 2017-03-15 17:52:26 +01:00
Marius Bakke
bd102157a1
gnu: mariadb: Update to 10.1.22 [fixes CVE-2017-3302 and CVE-2017-3313]. 
* gnu/packages/databases.scm (mariadb): Update to 10.1.22.
 2017-03-15 15:08:31 +01:00
Ludovic Courtès
e90e0fad1b
Merge branch 'master' into core-updates 2017-03-09 16:35:41 +01:00
ng0
bdc11dc4c0
gnu: Add tokyocabinet. 
* gnu/packages/databases.scm (tokyocabinet): New variable.

Signed-off-by: Kei Kebreau <kei@openmailbox.org>
 2017-03-02 13:56:54 -05:00
Marius Bakke
04c88363da
gnu: leveldb: Update to 1.20. 
* gnu/packages/databases.scm (leveldb): Update to 1.20.
 2017-03-02 18:39:14 +01:00
Efraim Flashner
9a9d6d782c
gnu: bdb@5.3: Support aarch64. 
* gnu/packages/databases.scm (bdb@5.3)[arguments]: Copy arguments from
* bdb, add '--build' flag for aarch64.
 2017-02-25 20:39:05 +02:00
Marius Bakke
b9fb6b8a24
gnu: rocksdb: Update to 5.1.4. 
* gnu/packages/databases.scm (rocksdb): Update to 5.1.4.
 2017-02-25 13:10:27 +01:00
Marius Bakke
630bc4fc07
gnu: rocksdb: Update to 5.1.3. 
* gnu/packages/databases.scm (rocksdb): Update to 5.1.3.
 2017-02-24 11:47:28 +01:00
Efraim Flashner
d15432ca9e
Merge remote-tracking branch 'origin/master' into core-updates 2017-02-20 12:56:14 +02:00
Marius Bakke
8a68a35317
gnu: sqlite: Update to 3.17.0. 
* gnu/packages/databases.scm (sqlite): Update to 3.17.0.
 2017-02-13 20:16:45 +01:00
Leo Famulari
83f805be02
gnu: postgresql: Update to 9.5.6. 
* gnu/packages/databases.scm (postgresql): Update to 9.5.6.
 2017-02-12 13:42:03 -05:00
Danny Milosavljevic
c6b6a74e77
gnu: python-pyodbc-c: Update to 3.1.4. 
* gnu/packages/databases.scm (python-pyodbc-c): Update to 3.1.4.
 2017-02-11 10:22:20 +01:00
Ludovic Courtès
768f0ac9dd
Merge branch 'master' into core-updates 2017-02-10 17:40:25 +01:00
Marius Bakke
ba8b9f8de0
gnu: databases.scm: Use license: prefix. 
* gnu/packages/databases.scm (4store, gdbm, bdb, bdb-5.3, mysql, mariadb,
  postgresql, qdbm, rocksdb, sparql-query, sqlite, perl-dbi, redis,
  unixodbc, kyotocabinet, wiredtiger): Use license: prefix.
 2017-02-09 00:43:44 +01:00
Marius Bakke
06a035db42
gnu: databases.scm: Sort package imports. 
* gnu/packages/databases.scm (gnu): Sort module imports.
 2017-02-09 00:43:05 +01:00
Marius Bakke
77e52190fa
gnu: rocksdb: Update to 5.1.2. 
* gnu/packages/databases.scm (rocksdb): Update to 5.1.2.
[native-inputs]: Add WHICH.
 2017-02-09 00:40:35 +01:00
Danny Milosavljevic
98d403bb45
gnu: Add python-pyodbc-c. 
* gnu/packages/databases.scm (python-pyodbc-c, python2-pyodbc-c):
  New variables.

Signed-off-by: Kei Kebreau <kei@openmailbox.org>
 2017-02-07 13:34:38 -05:00
Marius Bakke
a24fda8114
gnu: bdb: Correct license. 
* gnu/packages/databases.scm (bdb)[license]: Replace with up-to-date
information. Move previous contents to ...
(bdb-5.3)[license]: ... here.
 2017-02-06 17:33:58 +01:00
Leo Famulari
e8c83d04e1
Merge branch 'master' into core-updates 2017-02-02 10:52:24 -05:00
Marius Bakke
d3c6ad0ab5
gnu: Add rocksdb. 
* gnu/packages/databases.scm (rocksdb): New variable.
 2017-01-30 16:52:29 +01:00
Leo Famulari
d123f2f991
Merge branch 'master' into core-updates 2017-01-25 12:42:39 -05:00
Thomas Danckaert
259a94e981
gnu: Add qdbm. 
* gnu/packages/databases.scm (qdbm): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-01-24 23:09:09 +01:00