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Author SHA1 Message Date
Ricardo Wurmus
e07fc640cf
gnu: r-roxygen2: Update to 7.1.1. 
* gnu/packages/statistics.scm (r-roxygen2): Update to 7.1.1.
[native-inputs]: Add r-knitr.
 2020-06-28 05:46:20 +02:00
Ricardo Wurmus
f8c999152e
gnu: r-directlabels: Update to 2020.6.17. 
* gnu/packages/cran.scm (r-directlabels): Update to 2020.6.17.
[native-inputs]: Add r-knitr.
 2020-06-28 05:46:20 +02:00
Ricardo Wurmus
e9f02d72d3
gnu: r-rgdal: Update to 1.5-12. 
* gnu/packages/cran.scm (r-rgdal): Update to 1.5-12.
 2020-06-28 05:46:20 +02:00
Ricardo Wurmus
6bbb287a60
gnu: r-flexdashboard: Update to 0.5.2. 
* gnu/packages/cran.scm (r-flexdashboard): Update to 0.5.2.
[source]: Delete minified JavaScript files in a snippet.
 2020-06-28 05:46:20 +02:00
Ricardo Wurmus
53ba82dda1
gnu: r-rcppparallel: Update to 5.0.2. 
* gnu/packages/cran.scm (r-rcppparallel): Update to 5.0.2.
 2020-06-28 05:46:20 +02:00
Ricardo Wurmus
53fd3d5a8f
gnu: r-emmeans: Update to 1.4.8. 
* gnu/packages/cran.scm (r-emmeans): Update to 1.4.8.
 2020-06-28 05:46:20 +02:00
Ricardo Wurmus
6c8b60acc9
gnu: r-raster: Update to 3.3-7. 
* gnu/packages/cran.scm (r-raster): Update to 3.3-7.
 2020-06-28 05:46:20 +02:00
Ricardo Wurmus
bfaf6cf1f9
gnu: r-sjlabelled: Update to 1.1.6. 
* gnu/packages/cran.scm (r-sjlabelled): Update to 1.1.6.
 2020-06-28 05:46:20 +02:00
Ricardo Wurmus
e34f98a4a6
gnu: r-officer: Update to 0.3.12. 
* gnu/packages/cran.scm (r-officer): Update to 0.3.12.
 2020-06-28 05:46:20 +02:00
Ricardo Wurmus
0d742a0523
gnu: r-ggpubr: Update to 0.4.0. 
* gnu/packages/cran.scm (r-ggpubr): Update to 0.4.0.
 2020-06-28 05:46:19 +02:00
Ricardo Wurmus
308d91d886
gnu: r-renv: Update to 0.11.0. 
* gnu/packages/cran.scm (r-renv): Update to 0.11.0.
 2020-06-28 05:46:19 +02:00
Ricardo Wurmus
6b9954f649
gnu: r-jsonlite: Update to 1.7.0. 
* gnu/packages/cran.scm (r-jsonlite): Update to 1.7.0.
[native-inputs]: Add r-knitr.
 2020-06-28 05:46:19 +02:00
Ricardo Wurmus
fb4804d03d
gnu: r-scater: Update to 1.16.2. 
* gnu/packages/bioinformatics.scm (r-scater): Update to 1.16.2.
 2020-06-28 05:46:19 +02:00
Ricardo Wurmus
e66f81cf63
gnu: r-biocviews: Update to 1.56.1. 
* gnu/packages/bioinformatics.scm (r-biocviews): Update to 1.56.1.
 2020-06-28 05:46:19 +02:00
Ricardo Wurmus
fa7871af77
gnu: r-dexseq: Update to 1.34.1. 
* gnu/packages/bioinformatics.scm (r-dexseq): Update to 1.34.1.
 2020-06-28 05:46:19 +02:00
Tobias Geerinckx-Rice
4a498d0012
gnu: dropbear: Update to 2020.80 [fix for CVE-2018-20685]. 
* gnu/packages/ssh.scm (dropbear): Update to 2020.80.
 2020-06-27 23:50:56 +02:00
André Batista
0b7c540032
gnu: lxqt: Update to 0.15.0. 
* gnu/packages/lxqt.scm
(libstatgrab): Update to 0.92.
(lxqt-build-tools): Update to 0.7.0.
(libqtxdg): Update to 3.5.0.
(liblxqt): Update to 0.15.1.
(libsysstat): Update to 0.4.3.
(lxqt-about): Update to 0.15.0.
(lxqt-admin): Update to 0.15.0.
(lxqt-config): Update to 0.15.0.
(lxqt-globalkeys): Update to 0.15.0.
(lxqt-notificationd): Update to 0.15.0.
(lxqt-openssh-askpass): Update to 0.15.0.
(lxqt-panel): Update to 0.15.1.
(lxqt-policykit): Update to 0.15.0.
(lxqt-powermanagement): Update to 0.15.0.
(lxqt-qtplugin): Update to 0.15.1.
(lxqt-runner): Update to 0.15.0.
(lxqt-session): Update to 0.15.0.
(lxqt-sudo): Update to 0.15.0.
(lxqt-themes): Update to 0.15.0.
(libfm-qt): Update to 0.15.1.
(pcmanfm-qt): Update to 0.15.1.
(compton-conf): Update to 0.15.0.
(lximage-qt): Update to 0.15.0.
(obconf-qt): Update to 0.15.0.
(pavucontrol-qt): Update to 0.15.0.
(qps): Update to 2.1.0.
(qps)[inputs]: Add kwindowsystem, liblxqt and libqtxdg.
(qtermwidget): Update to 0.15.0.
(qterminal): Update to 0.15.0.
(screengrab): Update to 2.0.1.
(lxqt-archiver): Update to 0.2.0.
(lxqt-archiver)[origin]: Use tarball release.
(lxqt-connman-applet): Update to 0.15.0.
(lxqt-connman-applet)[arguments]: Add new patch phase.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2020-06-27 23:42:21 +02:00
Timotej Lazar
8a35ffd8ad
gnu: libtiff: Use HTTPS. 
* gnu/packages/image.scm (libtiff)[source]: Use HTTPS.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2020-06-27 23:42:21 +02:00
Ludovic Courtès
0505eda9c7
packages: Recognize SHA3 and BLAKE2s for 'content-hash'. 
* guix/packages.scm (build-content-hash): Add 'sha3-256', 'sha3-512',
and 'blake2s-256'.
* tests/packages.scm ("package-source-derivation, origin, sha3-512"):
New test.
 2020-06-27 23:42:20 +02:00
Ludovic Courtès
8e6c1415d8
daemon: Recognize SHA3 and BLAKE2s. 
* nix/libutil/hash.hh (HashType): Add htSHA3_256, htSHA3_512, and
htBLAKE2s_256.
* nix/libutil/hash.cc (parseHashType, printHashType): Recognize them.
* tests/store.scm ("add-to-store"): Test these algorithms.
 2020-06-27 23:42:20 +02:00
Ludovic Courtès
8dc6c38785
daemon: Remove OpenSSL hash compatibility wrappers. 
* nix/libutil/hash.cc (struct Ctx): Copy from gcrypt-hash.hh.
(start, update, finish): Use gcrypt functions directly instead of
OpenSSL-like wrappers.
* nix/libutil/gcrypt-hash.cc, nix/libutil/gcrypt-hash.hh,
nix/libutil/md5.h, nix/libutil/sha1.h, nix/libutil/sha256.h,
nix/libutil/sha512.h: Remove.
* nix/local.mk (libutil_a_SOURCES, libutil_headers): Adjust
accordingly.
 2020-06-27 23:42:20 +02:00
Ludovic Courtès
3fb6b8f304
daemon: Map directly to gcrypt hash functions. 
* nix/libutil/hash.hh (HashType): Map directly to GCRY_MD_ values.
(md5HashSize, sha1HashSize, sha256HashSize, sha512HashSize): Remove.
* nix/libutil/hash.cc (Hash::Hash): Use 'gcry_md_get_algo_dlen'.
 2020-06-27 23:42:20 +02:00
Ludovic Courtès
4b4f890cb0
bash completion: Complete 'guix environment' properly. 
* etc/completion/bash/guix (_guix_complete): Add case for "guix environment".
 2020-06-27 23:42:20 +02:00
Tobias Geerinckx-Rice
5c10200b54
gnu: Add autofs. 
* gnu/packages/file-systems.scm (autofs): New public variable.

Co-authored-by: Oleg Pykhalov <go.wigust@gmail.com>
 2020-06-27 23:28:58 +02:00
Tobias Geerinckx-Rice
90596f373a
gnu: python-setproctitle: Fix indentation. 
* gnu/packages/python-xyz.scm (python-setproctitle): Re-indent.
 2020-06-27 23:28:06 +02:00
Tobias Geerinckx-Rice
3f68322e5a
gnu: python-setproctitle: Fix build. 
* gnu/packages/python-xyz.scm (python-setproctitle)[arguments]:
Add ‘--embed’ to $PYCONFIG.
 2020-06-27 23:28:06 +02:00
Peter Lo
bc36937431
gnu: Add r-shapforxgboost. 
* gnu/packages/cran.scm (r-shapforxgboost): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2020-06-27 23:17:38 +02:00
Ricardo Wurmus
ecbf47d97d
gnu: Add emacs-browse-kill-ring. 
* gnu/packages/emacs-xyz.scm (emacs-browse-kill-ring): New variable.
 2020-06-27 22:50:05 +02:00
Marius Bakke
afdc16d904
gnu: x265: Update to 3.4. 
* gnu/packages/patches/x265-arm-flags.patch: Update patch.
* gnu/packages/video.scm (x265): Update to 3.4.
[arguments]: Remove obsolete substitution.  Disable the newly-added assembly
optimizations on AArch64, as they are not implemented for all targets we build.
 2020-06-27 20:08:24 +02:00
Marius Bakke
cd03e2cb2f
gnu: libcyaml: Remove unused input. 
* gnu/packages/web.scm (libcyaml)[native-inputs]: Remove GIT.
 2020-06-27 20:08:24 +02:00
Marius Bakke
e0bb6391a9
gnu: ilmbase: Update to 2.5.2. 
* gnu/packages/patches/ilmbase-fix-test-arm.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
* gnu/packages/graphics.scm (ilmbase): Update to 2.5.2.
[source](patches): Remove 'ilmbase-fix-test-arm.patch'.
(openexr)[arguments]: Really increase test timeout, as the previous fix was
ineffective.
 2020-06-27 20:08:24 +02:00
Marius Bakke
ea60beeb3d
gnu: libzip: Update to 1.7.1. 
* gnu/packages/compression.scm (libzip): Update to 1.7.1.
 2020-06-27 20:08:24 +02:00
Marius Bakke
cd533cb497
gnu: exempi: Delete the static library. 
* gnu/packages/freedesktop.scm (exempi)[arguments]: Add phase to delete libexempi.a.
 2020-06-27 20:08:23 +02:00
Marius Bakke
28d3f49e35
gnu: exempi: Update to 2.5.2. 
* gnu/packages/freedesktop.scm (exempi): Update to 2.5.2.
 2020-06-27 20:08:23 +02:00
Marius Bakke
9001eea9b0
gnu: python-gevent: Update to 20.6.2. 
* gnu/packages/python-xyz.scm (python-gevent): Update to 20.6.2.
(python2-gevent)[native-inputs]: Add PYTHON2-SELECTORS2.
 2020-06-27 20:08:23 +02:00
Marius Bakke
6be8ac2d81
gnu: python-greenlet: Update to 0.4.16. 
* gnu/packages/python-xyz.scm (python-greenlet): Update to 0.4.16.
 2020-06-27 20:08:23 +02:00
Marius Bakke
db10d94dcd
gnu: Add python2-selectors2. 
* gnu/packages/python-xyz.scm (python2-selectors2): New public variable.
 2020-06-27 20:08:23 +02:00
Marius Bakke
edeb6f17f2
gnu: dav1d: Update to 0.7.1. 
* gnu/packages/video.scm (dav1d): Update to 0.7.1.
 2020-06-27 20:08:23 +02:00
Marius Bakke
e36c4d0bca
gnu: libconfuse: Do not build static libraries. 
* gnu/packages/textutils.scm (libconfuse)[arguments]: New field.
 2020-06-27 20:08:23 +02:00
Marius Bakke
07d6003be0
gnu: libconfuse: Update to 3.3. 
* gnu/packages/textutils.scm (libconfuse): Update to 3.3.
 2020-06-27 20:08:23 +02:00
Marius Bakke
25e0083165
gnu: spdlog: Update to 1.6.1. 
* gnu/packages/logging.scm (spdlog): Update to 1.6.1.
[arguments]: Add "-DSPDLOG_BUILD_TESTS=ON" in #:configure-flags.
 2020-06-27 20:08:22 +02:00
Marius Bakke
866ce94351
gnu: feh: Update to 3.4.1. 
* gnu/packages/image-viewers.scm (feh): Update to 3.4.1.
 2020-06-27 20:08:22 +02:00
Marius Bakke
75ebc650c8
gnu: opusfile: Do not build static libraries. 
* gnu/packages/xiph.scm (opusfile)[arguments]: New field.
 2020-06-27 20:08:22 +02:00
Marius Bakke
fb6b40b02e
gnu: opusfile: Update to 0.12. 
* gnu/packages/xiph.scm (opusfile): Update to 0.12.
 2020-06-27 20:08:22 +02:00
Pierre Neidhardt
5f7474a209
gnu: Add dhewm3. 
* gnu/packages/game-development.scm (dhewm3): New variable.
 2020-06-27 16:38:35 +02:00
Pierre Neidhardt
c3c633522d
gnu: slynk: Update to 20200626. 
* gnu/packages/lisp-xyz.scm (slynk): Update 20200626.
[source]: Don't rename slynk-util system since it seems useless for sbcl-slynk
but it breaks cl-slynk.
[description]: Improve syntax.
 2020-06-27 15:40:47 +02:00
Pierre Neidhardt
99648ef16e
gnu: emacs-sly: Update to 20200626. 
* gnu/packages/emacs-xyz.scm (emacs-sly): Update to 20200626.
 2020-06-27 15:40:47 +02:00
Jan (janneke) Nieuwenhuizen
65d95e5d85
hurd-boot: Mount /proc, add /etc/mtab. 
* gnu/build/hurd-boot.scm (set-hurd-device-translators): Mount /proc.  Add
symlink to /etc/mtab into /proc/mounts.
 2020-06-27 13:01:40 +02:00
Jan (janneke) Nieuwenhuizen
db08a0d203
hurd-boot: Remove duplicate calls to 'scope'. 
* gnu/build/hurd-boot.scm (set-hurd-device-translators): Remove duplicate
calls to 'scope'.
 2020-06-27 12:59:40 +02:00
Oleg Pykhalov
d8a046d560
gnu: Add jc. 
* gnu/packages/admin.scm (jc): New variable.
 2020-06-27 12:46:55 +03:00