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55750 commits

Author SHA1 Message Date
Lars-Dominik Braun
9cc3cfcbe8
gnu: Add r-tam.
* gnu/packages/cran.scm (r-tam): New variable.
2020-02-22 20:42:13 +01:00
Lars-Dominik Braun
55c067a309
gnu: Add r-cdm.
* gnu/packages/cran.scm (r-cdm): New variable.
2020-02-22 20:42:13 +01:00
Lars-Dominik Braun
fbf76ad583
gnu: Add r-semplot.
* gnu/packages/cran.scm (r-semplot): New variable.
2020-02-22 20:42:13 +01:00
Lars-Dominik Braun
50de6fde50
gnu: Add r-qgraph.
* gnu/packages/cran.scm (r-qgraph): New variable.
2020-02-22 20:42:13 +01:00
Lars-Dominik Braun
d74e9f8fe9
gnu: Add r-d3network.
* gnu/packages/cran.scm (r-d3network): New variable.
2020-02-22 20:42:12 +01:00
Lars-Dominik Braun
2919b3ce40
gnu: Add r-ggm.
* gnu/packages/cran.scm (r-ggm): New variable.
2020-02-22 20:42:12 +01:00
Lars-Dominik Braun
1c9089d2fc
gnu: Add r-bdgraph.
* gnu/packages/cran.scm (r-bdgraph): New variable.
2020-02-22 20:42:12 +01:00
Lars-Dominik Braun
6998b6f7aa
gnu: Add r-lisreltor.
* gnu/packages/cran.scm (r-lisreltor): New variable.
2020-02-22 20:42:12 +01:00
Lars-Dominik Braun
c86473c228
gnu: Add r-rockchalk.
* gnu/packages/cran.scm (r-rockchalk): New variable.
2020-02-22 20:42:12 +01:00
Lars-Dominik Braun
fe0020609a
gnu: Add r-kutils.
* gnu/packages/cran.scm (r-kutils): New variable.
2020-02-22 20:42:12 +01:00
Lars-Dominik Braun
3be13aa8ca
gnu: Add r-openmx.
* gnu/packages/cran.scm (r-openmx): New variable.
2020-02-22 20:42:12 +01:00
Lars-Dominik Braun
da9f63eeea
gnu: Add r-rpf.
* gnu/packages/cran.scm (r-rpf): New variable.
2020-02-22 20:42:12 +01:00
Lars-Dominik Braun
d228795210
gnu: Add r-stanheaders.
* gnu/packages/cran.scm (r-stanheaders): New variable.
2020-02-22 20:42:12 +01:00
Lars-Dominik Braun
8b217feb3b
gnu: Add r-regsem.
* gnu/packages/cran.scm (r-regsem): New variable.
2020-02-22 20:42:12 +01:00
Lars-Dominik Braun
27d9764d06
gnu: Add r-semtools.
* gnu/packages/cran.scm (r-semtools): New variable.
2020-02-22 20:42:12 +01:00
Lars-Dominik Braun
3d7115398f
gnu: Add r-sem.
* gnu/packages/cran.scm (r-sem): New variable.
2020-02-22 20:42:11 +01:00
Lars-Dominik Braun
247bd124db
gnu: Add r-matrixcalc.
* gnu/packages/cran.scm (r-matrixcalc): New variable.
2020-02-22 20:42:11 +01:00
Lars-Dominik Braun
8ef53c2255
gnu: Add r-mi.
* gnu/packages/cran.scm (r-mi): New variable.
2020-02-22 20:42:11 +01:00
Lars-Dominik Braun
07f3e9b93c
gnu: Add r-ltm.
* gnu/packages/cran.scm (r-ltm): New variable.
2020-02-22 20:42:11 +01:00
Lars-Dominik Braun
3385908e6b
gnu: Add r-msm.
* gnu/packages/cran.scm (r-msm): New variable.
2020-02-22 20:42:11 +01:00
Lars-Dominik Braun
c56a244004
gnu: Add r-polycor.
* gnu/packages/cran.scm (r-polycor): New variable.
2020-02-22 20:42:11 +01:00
Lars-Dominik Braun
7a19c76f00
gnu: Add r-stm.
* gnu/packages/cran.scm (r-stm): New variable.
2020-02-22 20:42:11 +01:00
Lars-Dominik Braun
d94d34c4a5
gnu: Add r-topicmodels.
* gnu/packages/cran.scm (r-topicmodels): New variable.
2020-02-22 20:42:11 +01:00
Lars-Dominik Braun
09df4c2aa2
gnu: Add r-quanteda.
* gnu/packages/cran.scm (r-quanteda): New variable.
2020-02-22 20:42:11 +01:00
Lars-Dominik Braun
e525c866d3
gnu: Add r-snowballc.
* gnu/packages/cran.scm (r-snowballc): New variable.
2020-02-22 20:42:11 +01:00
Lars-Dominik Braun
982a9fb6c6
gnu: Add r-spacyr.
* gnu/packages/cran.scm (r-spacyr): New variable.
2020-02-22 20:42:11 +01:00
Lars-Dominik Braun
6daed861a6
gnu: Add r-stopwords.
* gnu/packages/cran.scm (r-stopwords): New variable.
2020-02-22 20:42:11 +01:00
Lars-Dominik Braun
4f53ac4b9b
gnu: Add r-isocodes.
* gnu/packages/cran.scm (r-isocodes): New variable.
2020-02-22 20:42:10 +01:00
Lars-Dominik Braun
38339c4cab
gnu: Add r-proxyc.
* gnu/packages/cran.scm (r-proxyc): New variable.
2020-02-22 20:42:10 +01:00
Lars-Dominik Braun
532b318020
gnu: Add r-xmisc.
* gnu/packages/cran.scm (r-xmisc): New variable.
2020-02-22 20:42:10 +01:00
Lars-Dominik Braun
dfecd5598e
gnu: Add r-forecast.
* gnu/packages/cran.scm (r-forecast): New variable.
2020-02-22 20:42:10 +01:00
Lars-Dominik Braun
3ec74f9de9
gnu: Add r-fracdiff.
* gnu/packages/cran.scm (r-fracdiff): New variable.
2020-02-22 20:42:03 +01:00
Brian Leung
5508d9a8d7
gnu: Add emacs-persp-mode.
* gnu/packages/emacs-xyz.scm (emacs-persp-mode): New variable.
2020-02-22 10:53:49 -08:00
Thomas Danckaert
7dc0f1d5a8
gnu: qdbm: Fix segfault during tests.
gnu/packages/databses.scm (qdbm): Add "CFLAGS=-fPIC" to make-flags.
2020-02-22 17:38:29 +01:00
Oleg Pykhalov
9a39711438
etc: Add copyright.
* etc/copyright.el: New file.
* doc/contributing.texi (The Perfect Setup): Document this.
2020-02-22 17:56:31 +03:00
Tobias Geerinckx-Rice
582a79d3a9
gnu: Add unoconv.
* gnu/packages/libreoffice.scm (unoconv): New public variable.

Signed-off-by: Jakub Kądziołka <kuba@kadziolka.net>
2020-02-22 15:31:01 +01:00
Jean-Baptiste Note
e36826b2ba
gnu: emacs-gnuplot: Install to site-lisp instead of guix.d.
Fixes <https://bugs.gnu.org/39536>.

This is a followup to 65a7dd2950.

* gnu/packages/emacs-xyz.scm (emacs-gnuplot)[arguments]: Change ELISP-DIR.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2020-02-22 12:17:35 +01:00
Matt Wette
3d1e42321f
import: github: Use HTTP "Authorization" header for access tokens.
Fixes <https://bugs.gnu.org/39511>.

The "access_token" query parameter is now deprecated:

  https://developer.github.com/changes/2019-11-05-deprecated-passwords-and-authorizations-api/#authenticating-using-query-parameters

* guix/import/github.scm (fetch-releases-or-tags)[headers]: Add
"Authorization" header when (%github-token) is true.
[decorate]: Remove, and remove callers.
2020-02-22 12:17:35 +01:00
Dimakakos Dimos
eb85995738
gnu: Add cl-lquery.
* gnu/packages/lisp-xyz.scm (sbcl-lquery, cl-lquery, ecl-lquery): New variables.

Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
2020-02-22 10:40:36 +01:00
Dimakakos Dimos
cfc9004e3f
gnu: Add cl-clss.
* gnu/packages/lisp-xyz.scm (cl-clss, sbcl-clss, ecl-clss): New variables.

Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
2020-02-22 10:31:12 +01:00
Ludovic Courtès
447f834263
git-authenticate: Store the sub-key fingerprint of mab.
This is a followup to 76a8dc3ee2, signed
with this sub-key.

* build-aux/git-authenticate.scm (%committers): Store the sub-key
fingerprint of mab.
2020-02-22 00:48:27 +01:00
Ludovic Courtès
4cb63a564d
deduplication: Use nix-base32 encoding for link names.
Fixes <https://bugs.gnu.org/39725>.

* guix/store/deduplication.scm (deduplicate): Use
'bytevector->nix-base32-string' instead of 'bytevector->base16-string'.
2020-02-22 00:46:06 +01:00
Lars-Dominik Braun
3789187252
build: Depend on guile-ssh 0.12.0
This is a followup to 35f3511167.

* m4/guix.m4 (GUIX_CHECK_GUILE_SSH): Check for userauth-gssapi!
* doc/guix.texi: Document version requirement

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2020-02-22 00:45:58 +01:00
Ludovic Courtès
43e282accc
tests: Factorize LUKS passphrase.
* gnu/tests/install.scm (%luks-passphrase): New variable.
(%encrypted-root-installation-script): Use it.
(enter-luks-passphrase): Use it.
2020-02-22 00:45:42 +01:00
Ludovic Courtès
5c04b00cf4
installer: Log important bits to syslog.
* gnu/installer.scm (installer-program): Log crashes with 'syslog'.
* gnu/installer/parted.scm (luks-format-and-open, luks-close)
(mount-user-partitions, umount-user-partitions): Add 'syslog' calls.
* gnu/installer/steps.scm (run-installer-steps): Log the running step
with 'syslog'.
* gnu/installer/utils.scm (run-shell-command): Add calls to 'syslog'.
2020-02-22 00:45:42 +01:00
Ludovic Courtès
2cf65e1d54
installer: Add 'syslog' macro to write to syslog.
* gnu/installer/utils.scm (open-syslog-port, syslog-port): New
procedures.
(syslog): New macro.
2020-02-22 00:45:42 +01:00
Ludovic Courtès
b6ec284fe8
marionette: Provide portable US-layout keystrokes for "<" and ">".
* gnu/build/marionette.scm (%qwerty-us-keystrokes): Use shit-comma and
shift-dot for #\< and #\> because the "less" key doesn't work the same
in "US intl." layouts.
2020-02-22 00:45:42 +01:00
Ludovic Courtès
1708ed6e9d
marionette: 'wait-for' procedures no longer leak a port.
* gnu/build/marionette.scm (wait-for-tcp-port): Close SOCK upon
success.
(wait-for-unix-socket): Likewise.
2020-02-22 00:45:42 +01:00
Tobias Geerinckx-Rice
3c4c60fa79
gnu: bind: Update to 9.16.0.
* gnu/packages/dns.scm (isc-bind): Update to 9.16.0.
[inputs]: Add libuv.
[native-inputs]: Add pkg-config.  Remove net-tools.
[arguments]: Remove obsolete --with-openssl= from #:configure-flags.
2020-02-22 00:16:15 +01:00
Tobias Geerinckx-Rice
3ef91e1534
gnu: Use HTTPS for hackage.haskell.org home pages.
* gnu/packages/haskell-xyz.scm (ghc-network-byte-order)
(ghc-base-compat-batteries, ghc-regex-tdfa-text, ghc-sdl2-image)
(ghc-language-glsl, ghc-sop-core, ghc-libffi, ghc-path, ghc-io-streams)
(ghc-openssl-streams, ghc-haskell-lexer, ghc-prettyclass, ghc-ifelse)
(ghc-sdl2-mixer, ghc-errorcall-eq-instance, ghc-filepath-bytestring)
(ghc-refact, ghc-pointedlist, ghc-string-qq, ghc-tls-session-manager)
(ghc-magic, ghc-exactprint, ghc-inline-c, ghc-infer-license)
(ghc-unagi-chan)[home-page]: Use HTTPS.
2020-02-22 00:16:15 +01:00