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Xinglu Chen
550f4aa682
gnu: ocaml-ppx-variants-conv: Patch for building with ocaml-ppxlib. 
The patch will make it build when building it with ocaml-ppxlib@0.23.0.

* gnu/packages/patches/ocaml-ppx-variants-ppxlib-api-change.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
* gnu/packages/ocaml.scm (ocaml-ppx-variants-conv): Apply the patch.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2021-09-06 23:27:40 +02:00
Xinglu Chen
b60a7f049c
gnu: ocamlformat: Update to 0.19.0. 
* gnu/packages/ocaml.scm (ocamlformat): Update to 0.19.0.
[propagated-inputs]: Add ocaml-odoc-parser.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2021-09-06 23:27:40 +02:00
Xinglu Chen
c80e71a586
gnu: ocaml-ppx-optcomp: Update to 0.14.3. 
* gnu/packages/ocaml.scm (ocaml-ppx-optcomp): Update to 0.14.3.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2021-09-06 23:27:40 +02:00
Ludovic Courtès
5fc9d71bac
gnu: ocaml-markup@0.8.0: Use 'ocaml-ounit', not 'ocaml-ounit2'. 
* gnu/packages/ocaml.scm (ocaml-markup0.8.0)[native-inputs]: New field.
 2021-09-06 23:27:40 +02:00
Ludovic Courtès
153fd217b6
swh: Add 'lookup-snapshot-branch'. 
* guix/swh.scm (<snapshot>)[id]: New field.
(snapshot-url, lookup-snapshot-branch): New procedures.
 2021-09-06 22:58:12 +02:00
Ludovic Courtès
63ed618e33
swh: <revisions> accept null 'date' fields. 
* guix/swh.scm (maybe-null): New procedure.
(<revision>)[date]: Use it.
 2021-09-06 22:58:12 +02:00
Ludovic Courtès
b452c3b37a
swh: Export <snapshot> accessors. 
* guix/swh.scm: Export <snapshot> accessors.
 2021-09-06 22:58:12 +02:00
Ludovic Courtès
b949f34f31
gnu: Use the non-deprecated TeX packages. 
This commit leaves 'dblatex' and 'texlive-hyperref' as users of
deprecated packages, but these have many dependents.

* gnu/packages/bioinformatics.scm (discrover)[native-inputs]: Use
non-deprecated TeX Live packages.
(velvet)[native-inputs]: Likewise.
* gnu/packages/chez.scm (chez-scheme)[native-inputs]: Likewise.
(chez-web)[native-inputs]: Likewise.
* gnu/packages/engineering.scm (fastcap)[native-inputs]: Likewise.
* gnu/packages/guile-xyz.scm (emacsy)[native-inputs]: Likewise.
* gnu/packages/maths.scm (hypre)[native-inputs]: Likewise.
* gnu/packages/music.scm (lilypond)[native-inputs]: Likewise.
* gnu/packages/ocaml.scm (ocaml-bibtex2html)[native-inputs]: Likewise.
* gnu/packages/plotutils.scm (asymptote)[native-inputs]: Likewise.
* gnu/packages/python-xyz.scm (python-numpy-documentation)[native-inputs]:
Likewise.
(python-matplotlib-documentation)[native-inputs]: Likewise.
(python-ipython-documentation)[native-inputs]: Likewise.
(python-nbconvert)[native-inputs]: Likewise.
(python-pypandoc)[native-inputs]: Likewise.
* gnu/packages/statistics.scm (r-with-tests)[native-inputs]: Likewise.
* gnu/packages/tex.scm (texlive-pstool)[propagated-inputs]: Likewise.
(teximpatient)[native-inputs]: Likewise.
(texlive-latex-pgf)[propagated-inputs]: Likewise.
(texlive-beamer)[propagated-inputs]: Likewise.
 2021-09-06 22:02:15 +02:00
Ludovic Courtès
3dc8052b51
gnu: tex: Use 'define-deprecated' for deprecated packages. 
This allows us to get compile-time warnings when using deprecated
packages, typically in calls to 'texlive-union' or similar.

* gnu/packages/tex.scm (define-deprecated-package): New macro.
(texlive-generic-unicode-data)
(texlive-generic-tex-ini-files)
(texlive-metafont-base)
(texlive-tex-fontinst-base)
(texlive-fonts-cm)
(texlive-fonts-cm-super)
(texlive-fonts-lm)
(texlive-fonts-knuth-lib)
(texlive-latex-mflogo)
(texlive-fonts-mflogo-font)
(texlive-fonts-amsfonts)
(texlive-latex-amsfonts)
(texlive-generic-hyph-utf8)
(texlive-generic-dehyph-exptl)
(texlive-generic-epsf)
(texlive-latex-xcolor)
(texlive-latex-hyperref)
(texlive-latex-oberdiek)
(texlive-latex-url)
(texlive-latex-fontspec)
(texlive-luatex-luaotfload)
(texlive-latex-amscls)
(texlive-latex-babel)
(texlive-latex-psnfss)
(texlive-latex-filemod)
(texlive-latex-pstool)
(texlive-latex-seminar)
(texlive-latex-doi)
(texlive-latex-etoolbox)
(texlive-fonts-adobe-times)
(texlive-fonts-adobe-palatino)
(texlive-fonts-adobe-zapfding)
(texlive-fonts-stmaryrd)
(texlive-fonts-txfonts)
(texlive-latex-lh)
(texlive-latex-wasysym)
(texlive-generic-pdftex)
(texlive-fonts-xypic)
(texlive-fonts-charter)
(texlive-latex-beamer)
(texlive-latex-pdfx)
(texlive-iftex)
(texlive-generic-ifxetex): Use it.
 2021-09-06 22:02:15 +02:00
Ludovic Courtès
f8ae824cad
deprecation: Add 'define-deprecated/public'. 
* guix/deprecation.scm (public): New macro.
(define-deprecated): Add (_ visibility variable replacement exp) clause.
Honor VISIBILITY.
(define-deprecated/public): New macro.
 2021-09-06 22:02:11 +02:00
Nicolas Goaziou
b0ea618fbe
gnu: emacs-xref: Update to 1.2.2. 
* gnu/packages/emacs-xyz.scm (emacs-xref): Update to 1.2.2.
 2021-09-06 18:20:36 +02:00
Ludovic Courtès
78dab5a6c4
gnu: guile@1.8: Disable tests. 
* gnu/packages/guile.scm (guile-1.8)[arguments]: Pass #:tests? #f.
 2021-09-06 15:19:10 +02:00
Ludovic Courtès
b792bc899d
gnu: guile@1.8: Build with '-O1'. 
Fixes <https://issues.guix.gnu.org/50427>.

* gnu/packages/guile.scm (guile-1.8)[arguments]: Pass "CFLAGS" to #:configure-flags.
 2021-09-06 15:17:39 +02:00
Ricardo Wurmus
816d52ba93
gnu: Add r-megadepth. 
* gnu/packages/bioconductor.scm (r-megadepth): New variable.
 2021-09-06 14:48:24 +02:00
Ricardo Wurmus
c82b723bf8
gnu: Add megadepth. 
* gnu/packages/bioinformatics.scm (megadepth): New variable.
 2021-09-06 14:48:24 +02:00
Ricardo Wurmus
f9e5d04fc2
gnu: Add libdeflate. 
* gnu/packages/compression.scm (libdeflate): New variable.
 2021-09-06 14:48:23 +02:00
Ricardo Wurmus
9e836ca8fc
gnu: Add r-cmdfun. 
* gnu/packages/cran.scm (r-cmdfun): New variable.
 2021-09-06 14:48:23 +02:00
Thiago Jung Bauermann
aa1e952d21
gnu: php: Remove watchpoint tests on powerpc64le. 
All watchpoint tests except watch_002.phpt fail.  There’s an upstream bug
report about this problem so in the meantime remove them since it doesn’t
impact actually running PHP programs.

* gnu/packages/php.scm (php)[arguments]<#:phases>{prepare-tests}: Remove
watchpoint tests on powerpc64le.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2021-09-06 13:51:49 +02:00
Ludovic Courtès
08005133ec
gnu: glibc-static: Fix static NSS support. 
Support for static NSS broke in glibc 2.33, meaning that 'getpw' &
co. would always fail.  This patch backports the upstream fix to
reinstate it.

Reported by Marius Bakke.

* gnu/packages/patches/glibc-static-nss.patch: New file.
* gnu/packages/make-bootstrap.scm (glibc-for-bootstrap): Use it.
* gnu/local.mk (dist_patch_DATA): Add it.
 2021-09-06 13:50:00 +02:00
Liliana Marie Prikler
7158f8e4e9
Update mailmap. 
* .mailmap: Add entry for Liliana Marie Prikler.
 2021-09-06 12:15:57 +02:00
Liliana Marie Prikler
dad2dcbf0f
.guix-authorizations: Rename leoprikler to lilyp. 
* .guix-authorizations: Rename leoprikler to lilyp.
 2021-09-06 12:15:56 +02:00
Brice Waegeneire
06d34c703b
gnu: alacritty: Update to 0.9.0. 
* gnu/packages/terminals.scm (alacritty): Update to 0.9.0.
  [arguments]<cargo-inputs>: Update rust-alacritty-terminal to 0.15,
  rust-crossfont to 0.3, rust-dirs to 3.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
 2021-09-06 11:25:48 +02:00
Brice Waegeneire
ff1a5d5022
gnu: Add rust-crossfont-0.3. 
* gnu/packages/crates-io.scm (rust-crossfont-0.3): New variable.
(rust-crossfont-0.2): Inherit from above.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
 2021-09-06 11:23:49 +02:00
Brice Waegeneire
efca5516d1
gnu: rust-alacritty-terminal: Update to 0.15.0. 
* gnu/packages/crates-io.scm (rust-alacritty-terminal-0.15): Renamed
  from rust-alacritty-terminal-0.13.  Update to 0.15.0.
  [arguments]<cargo-inputs>: Update rust-base64 to 0.13.  Update
  rust-mio-anonymous-pipes to 0.2.  Update rust-nix to 0.22.
 2021-09-06 11:22:11 +02:00
Brice Waegeneire
54ce83b7f2
gnu: Add rust-mio-anonymous-pipes-0.2. 
* gnu/packages/crates-io.scm (rust-mio-anonymous-pipes-0.2): New variable.
(rust-mio-anonymous-pipes-0.1): Inherit from above.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
 2021-09-06 11:21:30 +02:00
Robby Zambito
aced5d2608
gnu: Add waypipe. 
* gnu/packages/freedesktop.scm (waypipe): New variable.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
 2021-09-06 11:15:00 +02:00
Xinglu Chen
32d80c2238
gnu: emacs-ebdb: Update to 0.8.4. 
* gnu/packages/emacs-xyz.scm (emacs-ebdb): Update to 0.8.4.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
 2021-09-06 11:10:37 +02:00
Xinglu Chen
6940a57abd
gnu: xwallpaper: Update to 0.7.3. 
* gnu/packages/xdisorg.scm (xwallpaper): Update to 0.7.3.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
 2021-09-06 11:09:54 +02:00
Xinglu Chen
d5753f1d19
gnu: emacs-xref: Update to 1.2.1. 
* gnu/packages/emacs-xyz.scm (emacs-xref): Update to 1.2.1.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
 2021-09-06 11:09:10 +02:00
Xinglu Chen
e76ed759a0
gnu: feh: Update to 3.7.1. 
* gnu/packages/image-viewers.scm (feh): Update to 3.7.1.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
 2021-09-06 11:05:20 +02:00
Felix Gruber
93bf42361c
gnu: Replace PYTHONPATH with GUIX_PYTHONPATH. 
In packages that do not use python-build-system, PYTHONPATH is generally
not defined. Instead we can use GUIX_PYTHONPATH which should contain all
Python dependencies.

* gnu/packages/bioinformatics.scm (shorah)[arguments]: Replace
  PYTHONPATH with GUIX_PYTHONPATH.
* gnu/packages/debug.scm (c-vise)[arguments]: Idem.
* gnu/packages/gnome.scm (drawing, apostrophe, ocrfeeder)[arguments]: Idem.
* gnu/packages/music.scm (a2jmidid)[arguments]: Idem.
* gnu/packages/syndication.scm (gfeeds)[arguments]: Idem.
* gnu/packages/xdisorg.scm (gammastep)[arguments]: Idem.

Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
 2021-09-06 10:47:54 +02:00
Guillaume Le Vaillant
722c17992e
gnu: glog: Update to 0.5.0. 
* gnu/packages/logging.scm (glog): Update to 0.5.0.
  [build-system]: Switch to 'cmake-build-system'.
  [arguments]: Remove 'disable-signal-tests' phase.
 2021-09-06 10:18:21 +02:00
Felix Gruber
df1f031d14
gnu: opencc: Fix build. 
* gnu/packages/textutils.scm (opencc)[arguments]: Create PYTHONPATH from
  GUIX_PYTHONPATH as the former is not defined.

Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
 2021-09-06 09:49:56 +02:00
Felix Gruber
86af6091d8
gnu: c++-gsl: Fix build with GCC 10. 
* gnu/packages/cpp.scm (c++-gsl)[source]: Add a patch from Debian
  to fix compilation of a test.
* gnu/packages/patches/c++-gsl-move-array-bounds-tests.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.

Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
 2021-09-06 09:43:08 +02:00
Felix Gruber
6900b3c1aa
gnu: libnice: Fix build. 
* gnu/packages/networking.scm (libnice)[native-inputs]: Add graphviz
  which is required to provide the dot program.

Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
 2021-09-06 09:30:52 +02:00
iKaSeRo
53ccbc1755
gnu: Add mlterm. 
* gnu/packages/terminals.scm (mlterm): New variable.

Signed-off-by: Tobias Geerinckx-Rice <me@tobias.gr>
 2021-09-06 00:16:51 +02:00
Danny Milosavljevic
dd7df191b6
gnu: u-boot-nintendo-nes-classic-edition: Make it actually boot again. 
* gnu/packages/patches/u-boot-nintendo-nes-serial.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add u-boot-nintendo-nes-serial.patch.
* gnu/packages/bootloaders.scm (u-boot-nintendo-nes-classic-edition): Downgrade to 2018.11.
[source]: Add patch.
[description]: Modify.
[native-inputs]: Add python-2.
 2021-09-05 23:45:29 +02:00
Raghav Gururajan
0b3ad325da
gnu: remmina: Update to 1.4.20. 
* gnu/packages/vnc.scm (remmina)[version]: Update to 1.4.20.
 2021-09-05 13:54:46 -04:00
Raghav Gururajan
795b7f053f
gnu: pipe-viewer: Update to 0.1.4. 
* gnu/packages/video.scm (pipe-viewer)[version]: Update to 0.1.4.
 2021-09-05 12:01:59 -04:00
Guillaume Le Vaillant
c5bb7b5d97
gnu: Fix some gexps. 
* gnu/packages/android.scm (adb, android-ext4-utils)[arguments]: Use
  'this-package-input' in gexps.
* gnu/packages/finance.scm (monero-gui)[arguments]: Idem.
* gnu/packages/lisp.scm (gcl)[arguments]: Idem.
 2021-09-05 13:56:25 +02:00
Guillaume Le Vaillant
79edda3874
gnu: opencpn: Fix building with gcc 10. 
* gnu/packages/geo.scm (opencpn)[arguments]: Pass '-fcommon' to CFLAGS.
 2021-09-05 11:48:59 +02:00
Sarah Morgensen
48bd27863f
gnu: pipewire: Fix build with GCC 10. 
* gnu/packages/patches/pipewire-0.2.7-fno-common.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
* gnu/packages/linux.scm (pipewire)[source]: Use it.

Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
 2021-09-05 11:01:45 +02:00
Sarah Morgensen
cdb63b192c
gnu: libappindicator: Fix build for GCC 10. 
* gnu/packages/freedesktop.scm (libappindicator)[source]: Add snippet to
  prevent declaring _PyGObject_API twice.

Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
 2021-09-05 10:56:41 +02:00
Sarah Morgensen
2302adc0ec
gnu: libsrtp: Update to 2.4.0. 
Fix building libsrtp with GCC 10 by updating to 2.4.0.

* gnu/packages/telephony.scm (libsrtp): Update to 2.4.0.

Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
 2021-09-05 10:40:52 +02:00
Sarah Morgensen
c1b350afc6
gnu: lablgtk: Update to 2.18.11. 
Update lablgtk to fix compilation with GCC 10.

* gnu/packages/ocaml.scm (lablgtk): Update to 2.18.11.

Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
 2021-09-05 10:29:46 +02:00
Felix Gruber
8bb7cb7bef
gnu: python-gast: Update to 0.5.2. 
* gnu/packages/python-xyz.scm (python-gast): Update to 0.5.2.

Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
 2021-09-05 10:02:18 +02:00
Tobias Geerinckx-Rice
ce65f2b73d
gnu: xfsprogs: Update to 5.13.0. 
* gnu/packages/linux.scm (xfsprogs): Update to 5.13.0.
[arguments]: Don't return #t from phases.
 2021-09-05 04:32:33 +02:00
Tobias Geerinckx-Rice
19c3ca0207
gnu: xrdb: Update to 1.2.1. 
* gnu/packages/xorg.scm (xrdb): Update to 1.2.1.
 2021-09-05 03:42:23 +02:00
Tobias Geerinckx-Rice
f60a2d1341
gnu: xwd: Update to 1.0.8. 
* gnu/packages/xorg.scm (xwd): Update to 1.0.8.
 2021-09-05 03:42:23 +02:00
Tobias Geerinckx-Rice
45066bc9ff
gnu: ne: Update to 3.3.1. 
* gnu/packages/text-editors.scm (ne): Update to 3.3.1.
[arguments]: Add a 'patch-early-shebang phase.
Don't return #t from other phases.
 2021-09-05 03:42:23 +02:00