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Author SHA1 Message Date
Ricardo Wurmus
abf0b2744d
gnu: Add r-ips. 
* gnu/packages/cran.scm (r-ips): New variable.
 2022-08-25 11:55:12 +02:00
Ricardo Wurmus
add211b277
gnu: Add r-scry. 
* gnu/packages/bioconductor.scm (r-scry): New variable.
 2022-08-25 11:55:12 +02:00
Ricardo Wurmus
dfa373069d
gnu: Add r-glmpca. 
* gnu/packages/cran.scm (r-glmpca): New variable.
 2022-08-25 11:55:11 +02:00
Arun Isaac
ee221461c3
gnu: laminar: Do not use auto-generated tarball. 
* gnu/packages/ci.scm (laminar)[source]: Use git-fetch.
 2022-08-25 13:46:41 +05:30
Arun Isaac
a36fb3d131
gnu: laminar: Update to 1.2. 
* gnu/packages/ci.scm (laminar): Update to 1.2.
[arguments]: Do not return #t from custom phases.
 2022-08-25 13:14:21 +05:30
Maxim Cournoyer
98457ba47b
doc: Replace remaining 'unset mentions with %unset-value. 
* doc/guix.texi (Networking Services): Replace 'unset with %unset-value.
(Power Management Services): Likewise.
(Complex Configurations): Likewise.
 2022-08-25 00:10:57 -04:00
Attila Lendvai
6fb9759ef3
services: configuration: Change the value of the unset marker. 
The new value of %unset-value sticks out more when something goes wrong, and
is also more unique; i.e. easier to search for.

Signed-off-by: Maxim Cournoyer <maxim.cournoyer@gmail.com>
 2022-08-25 00:10:42 -04:00
Attila Lendvai
ee08277a70
services: Use the new maybe/unset API. 
* gnu/home/services/ssh.scm (serialize-address-family): Use the public API of
the maybe infrastructure.
* gnu/services/file-sharing.scm (serialize-maybe-string): Use maybe-value.
(serialize-maybe-file-object): Use maybe-value-set?.
* gnu/services/getmail.scm (getmail-retriever-configuration): Don't use
internals in unset field declarations.
(getmail-destination-configuration): Ditto.
* gnu/services/messaging.scm (raw-content?): Use maybe-value-set?.
(prosody-configuration): Use %unset-value.
* gnu/services/telephony.scm (jami-shepherd-services): Use maybe-value-set?.
(archive-name->username): Use maybe-value-set?.
* tests/services/configuration.scm ("maybe type, no default"): Use
%unset-value.

Modified-by: Maxim Cournoyer <maxim.cournoyer@gmail.com>
Signed-off-by: Maxim Cournoyer <maxim.cournoyer@gmail.com>
 2022-08-25 00:10:32 -04:00
Attila Lendvai
cc32cd41f7
services: configuration: Add maybe-value exported procedure. 
* gnu/services/configuration.scm (maybe-value): New procedure.

Signed-off-by: Maxim Cournoyer <maxim.cournoyer@gmail.com>
 2022-08-24 23:27:54 -04:00
Attila Lendvai
147f8f19f8
services: configuration: Add %unset-value exported variable. 
* gnu/services/configuration.scm (%unset-value): New variable.
(normalize-field-type+def): Use it.
(maybe-value-unset?): Use it.

Signed-off-by: Maxim Cournoyer <maxim.cournoyer@gmail.com>
 2022-08-24 23:27:53 -04:00
宋文武
0e11067d53
gnu: wesnoth: Update to 1.16.5. 
* gnu/packages/games.scm (wesnoth): Update to 1.16.5.
 2022-08-25 11:12:36 +08:00
Maxim Cournoyer
1c803e63f9
services: configuration: Add a 'maybe-value-set?' procedure. 
* gnu/services/configuration.scm (maybe-value-set?): New procedure.
* doc/guix.texi (Complex Configurations): Document it.  Remove comment showing
usage of 'maybe-string' with a default value, which doesn't make sense.

Co-authored-by: Attila Lendvai <attila@lendvai.name>
 2022-08-24 22:34:45 -04:00
Zhu Zihao
31339f5f5f
gnu: Rename procedure "qt5-urls" to "qt-urls" in (gnu packages qt). 
This procedure now used by Qt5 and Qt6. "qt-urls" is more neutral than
original one.

* gnu/packages/qt.scm (qt5-urls): Rename to "qt-urls".
(qtbase-5)[source]: Use "qt-urls" for uri field.
(qtbase)[source]: Ditto.
(qt5compat)[source]: Ditto.
(qtsvg-5)[source]: Ditto.
(qtsvg)[source]: Ditto.
(qtimageformats)[source]: Ditto.
(qtx11extras)[source]: Ditto.
(qtxmlpatterns)[source]: Ditto.
(qtdeclarative-5)[source]: Ditto.
(qtdeclarative)[source]: Ditto.
(qtconnectivity)[source]: Ditto.
(qtwebsockets-5)[source]: Ditto.
(qtwebsockets)[source]: Ditto.
(qtsensors)[source]: Ditto.
(qtmultimedia-5)[source]: Ditto.
(qtshadertools)[source]: Ditto.
(qtmultimedia)[source]: Ditto.
(qtwayland)[source]: Ditto.
(qtserialport)[source]: Ditto.
(qtserialbus)[source]: Ditto.
(qtwebchannel-5)[source]: Ditto.
(qtwebchannel)[source]: Ditto.
(qtwebglplugin)[source]: Ditto.
(qtwebview)[source]: Ditto.
(qtlottie)[source]: Ditto.
(qttools-5)[source]: Ditto.
(qttools)[source]: Ditto.
(qtscript)[source]: Ditto.
(qtquickcontrols-5)[source]: Ditto.
(qtquickcontrols2-5)[source]: Ditto.
(qtgraphicaleffects)[source]: Ditto.
(qtgamepad)[source]: Ditto.
(qtscxml)[source]: Ditto.
(qtpositioning)[source]: Ditto.
(qtpurchasing)[source]: Ditto.
(qtcharts)[source]: Ditto.
(qtdatavis3d)[source]: Ditto.
(qtnetworkauth-5)[source]: Ditto.
(qtnetworkauth)[source]: Ditto.
(qtremoteobjects)[source]: Ditto.
(qtspeech)[source]: Ditto.
(qtwebengine-5)[source]: Ditto.
(qtwebengine)[source]: Ditto.

Signed-off-by: 宋文武 <iyzsong@member.fsf.org>
 2022-08-25 08:50:02 +08:00
pukkamustard
a39207f7af
gnu: Add ocaml-digestif. 
* gnu/packages/ocaml.scm (ocaml-digestif): New variable.

Signed-off-by: Julien Lepiller <julien@lepiller.eu>
 2022-08-24 18:21:54 +02:00
pukkamustard
1cb6064b49
gnu: Add ocaml-eqaf. 
* gnu/packages/ocaml.scm (ocaml-eqaf): New variable.

Signed-off-by: Julien Lepiller <julien@lepiller.eu>
 2022-08-24 18:21:44 +02:00
pukkamustard
4719f43841
gnu: Add ocaml-crowbar. 
* gnu/packages/ocaml.scm (ocaml-crowbar): New variable.

Signed-off-by: Julien Lepiller <julien@lepiller.eu>
 2022-08-24 18:21:27 +02:00
pukkamustard
3d403f56dd
gnu: Add ocaml-pprint. 
* gnu/packages/ocaml.scm (ocaml-pprint): New variable.

Signed-off-by: Julien Lepiller <julien@lepiller.eu>
 2022-08-24 18:21:12 +02:00
Xinglu Chen
6256e267da
gnu: Add ocaml-afl-persistent. 
* gnu/packages/ocaml.scm (ocaml-afl-persistent): New variable.

Signed-off-by: Julien Lepiller <julien@lepiller.eu>
 2022-08-24 18:21:05 +02:00
Julien Lepiller
09e3ab6fbf
gnu: maven: Update to 3.8.6. 
* gnu/packages/maven.scm (maven): Update to 3.8.6.
 2022-08-24 18:17:31 +02:00
Nicolas Goaziou
6199ee19ff
gnu: crawl: Honor the #:tests? flag. 
* gnu/packages/games.scm (crawl)[arguments]<#:phases>: Honor the #:tests? flag
in custom check phase.
 2022-08-24 16:06:46 +02:00
Nicolas Goaziou
1e16af13b0
gnu: crawl: Update to 0.29.0. 
* gnu/packages/games.scm (crawl): Update to 0.29.0.
[source]<origin>: Use GIT-FETCH method.
[arguments]<#:make-flags>: Match new directory layout.
<#:phases>: Add a phase to set version without calling GIT.

* gnu/packages/patches/crawl-upgrade-saves.patch: Match new directory layout.
 2022-08-24 16:03:32 +02:00
Ricardo Wurmus
f323f04326
gnu: Add gwl/next. 
* gnu/packages/package-management.scm (gwl/next): New variable.
 2022-08-24 11:30:47 +02:00
Nicolas Goaziou
c3b8defbe0
gnu: fsearch: Update to 0.2.2. 
* gnu/packages/search.scm (fsearch): Update to 0.2.2.
 2022-08-24 09:36:25 +02:00
Tobias Geerinckx-Rice
91b112b8dd
bootloader: Remove expired export. 
This follows up on commit 8a0e1bb12b.

* gnu/bootloader.scm: Don't export
bootloader-configuration-additional-configuration, which no longer
exists.

Reported by muradm in #guix.
 2022-08-21 02:00:00 +02:00
Jean-Baptiste Volatier
90ca0f57bf
gnu: julia: Update to 1.6.7. 
* gnu/packages/julia.scm (julia): Update to 1.6.7.
[arguments]: Add custom 'activate-gnu-source-for-loader phase. Adjust
custom 'adjust-test-suite, 'disable-broken-tests phases for changes in
the code. Remove trailing #t from phases.

Co-authored-by: Efraim Flashner <efraim@flashner.co.il>
 2022-08-23 21:35:03 +03:00
Mark H Weaver
d769cf81d8
gnu: icecat: Update to 91.13.0-guix0-preview1 [security fixes]. 
Includes fixes for CVE-2022-38472, CVE-2022-38473, and CVE-2022-38478.

* gnu/packages/gnuzilla.scm (%icecat-version, %icecat-build-id): Update.
(icecat-source): Update gnuzilla commit, base version, and hashes.
 2022-08-23 12:59:09 -04:00
Ricardo Wurmus
d26b29d263
gnu: Add flair. 
* gnu/packages/bioinformatics.scm (flair): New variable.
 2022-08-23 13:30:52 +02:00
Ricardo Wurmus
01dfcad225
gnu: Add python-ncls. 
* gnu/packages/python-xyz.scm (python-ncls): New variable.
 2022-08-23 13:29:30 +02:00
Ricardo Wurmus
8d42898572
gnu: python-mappy: Update to 2.24. 
* gnu/packages/bioinformatics.scm (python-mappy): Update to 2.24.
 2022-08-23 13:29:17 +02:00
Mădălin Ionel Patrașcu
7c47fa2513
gnu: Add r-ggvenndiagram. 
* gnu/packages/cran.scm (r-ggvenndiagram): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2022-08-23 12:04:25 +02:00
Mădălin Ionel Patrașcu
ee676283e2
gnu: Add r-rvenn. 
* gnu/packages/cran.scm (r-rvenn): New variable.
 2022-08-23 12:02:50 +02:00
Mădălin Ionel Patrașcu
4a6c6484df
gnu: Add r-organism-dplyr. 
* gnu/packages/bioconductor.scm (r-organism-dplyr): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2022-08-23 12:02:25 +02:00
Ricardo Wurmus
090663a7a5
gnu: Add r-bladderbatch. 
* gnu/packages/bioconductor.scm (r-bladderbatch): New variable.
 2022-08-23 11:45:59 +02:00
Mădălin Ionel Patrașcu
f6bcde85a6
gnu: Add r-pcaexplorer. 
* gnu/packages/bioconductor.scm (r-pcaexplorer): New variable.
 2022-08-23 11:43:20 +02:00
Mădălin Ionel Patrașcu
6c21c9fab1
gnu: Add r-parathyroidse. 
* gnu/packages/bioconductor.scm (r-parathyroidse): New variable.
 2022-08-23 11:43:20 +02:00
宋文武
fc4ff8c3e1
gnu: lxqt: Fix default icon theme. 
* gnu/packages/lxqt.scm (lxqt)[propagated-inputs]:
Replace oxygen-icons with breeze-icons.
 2022-08-23 10:15:30 +08:00
Felix Gruber
4c03f62ad0
gnu: python-shapely: Update to 1.8.4. 
* gnu/packages/python-xyz.scm (python-shapely): Update to 1.8.4.

Signed-off-by: 宋文武 <iyzsong@member.fsf.org>
 2022-08-23 08:38:46 +08:00
Tobias Geerinckx-Rice
0337b65284
gnu: python-lzo: Use G-expressions. 
* gnu/packages/python-compression.scm (python-lzo)[arguments]:
Rewrite as G-expressions.
 2022-08-21 02:00:12 +02:00
Tobias Geerinckx-Rice
504e060126
gnu: python-lzo: Update to 1.14. 
* gnu/packages/python-compression.scm (python-lzo): Update to 1.14.
[arguments]: Don't explicitly return #t from phases.
 2022-08-21 02:00:11 +02:00
Tobias Geerinckx-Rice
b5c07581c4
gnu: python-jaraco-functools: Disable flaky test. 
* gnu/packages/python-xyz.scm (python-jaraco-functools)[arguments]:
Skip the "test_function_throttled".

Reported by Lumine in #guix.
 2022-08-21 02:00:11 +02:00
Leo Famulari
ff3cecffaf
gnu: linux-libre 5.10: Update to 5.10.137. 
* gnu/packages/linux.scm (linux-libre-5.10-version): Update to 5.10.137.
(linux-libre-5.10-pristine-source): Update hash.
 2022-08-22 11:57:28 -04:00
Leo Famulari
5a07d99870
gnu: linux-libre 5.15: Update to 5.15.62. 
* gnu/packages/linux.scm (linux-libre-5.15-version): Update to 5.15.62.
(linux-libre-5.15-pristine-source): Update hash.
 2022-08-22 11:57:28 -04:00
Leo Famulari
3ac47c1b88
gnu: linux-libre: Update to 5.18.19. 
* gnu/packages/linux.scm (linux-libre-5.18-version): Update to 5.18.19.
(linux-libre-5.18-pristine-source): Update hash.
 2022-08-22 11:57:28 -04:00
Nicolas Goaziou
3a9fae15a0
gnu: emacs-autothemer: Update to 0.2.6. 
* gnu/packages/emacs-xyz.scm (emacs-autothemer): Update to 0.2.6.
 2022-08-22 12:13:21 +02:00
Nicolas Goaziou
4719f3d204
gnu: emacs-geiser: Update to 0.25.1. 
* gnu/packages/emacs-xyz.scm (emacs-geiser): Update to 0.25.1.
 2022-08-22 12:12:12 +02:00
Mădălin Ionel Patrașcu
36b38bb4f3
gnu: Add r-polylabelr. 
* gnu/packages/cran.scm (r-polylabelr): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2022-08-22 11:18:29 +02:00
Mădălin Ionel Patrașcu
ca823a1600
gnu: Add r-gensa. 
* gnu/packages/cran.scm (r-gensa): New variable.
 2022-08-22 10:57:01 +02:00
Mădălin Ionel Patrașcu
3534165413
gnu: Add r-ggvenn. 
* gnu/packages/cran.scm (r-ggvenn): New variable.
 2022-08-22 10:57:01 +02:00
Hilton Chain
3a4a65bd74
gnu: i3-autotiling: Update to 1.6.1. 
* gnu/packages/python-xyz.scm (i3-autotiling): Update to 1.6.1.

Signed-off-by: 宋文武 <iyzsong@member.fsf.org>
 2022-08-22 15:52:24 +08:00
Nicolas Graves
114c9ea22f
gnu: Add emacs-citar-org-roam. 
* gnu/packages/emacs-xyz.scm (emacs-citar-org-roam): New variable.

Signed-off-by: Andrew Tropin <andrew@trop.in>
 2022-08-22 10:32:39 +03:00