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Author SHA1 Message Date
Marius Bakke
88f2dd1ddf
gnu: rofi: Update to 1.3.1. 
* gnu/packages/xdisorg.scm (rofi): Update to 1.3.1.
 2017-01-10 22:35:05 +01:00
Ludovic Courtès
39dc70323c
gnu: youtube-dl: Update to 2017.01.10. 
* gnu/packages/video.scm (youtube-dl): Update to 2017.01.10.  Change
URLs to yt-dl.org.
 2017-01-10 22:15:27 +01:00
Ludovic Courtès
082be6d2a1
gnu: e2fsprogs: Remove timestamp from 'libext2fs.info.gz'. 
* gnu/packages/linux.scm (e2fsprogs)[source](snippet): Patch
'doc/Makefile.in' to use the '-n' option of gzip.
 2017-01-10 22:15:26 +01:00
Ludovic Courtès
74d212911e
gnu: e2fsprogs: Use symlinks instead of hard links. 
* gnu/packages/linux.scm (e2fsprogs)[arguments]: Pass
"--enable-symlink-install".
 2017-01-10 22:15:26 +01:00
Leo Famulari
6d3e08d4e8
gnu: Add sysstat. 
* gnu/packages/linux.scm (sysstat): New variable.
 2017-01-10 13:38:35 -05:00
Tobias Geerinckx-Rice
d4acb6db2f
gnu: python-click: Update to 6.7. 
* gnu/packages/python.scm (python-click): Update to 6.7.
 2017-01-10 17:36:57 +01:00
Mark H Weaver
3720371580
gnu: linux-libre@4.4: Update hash for fixed upstream tarball. 
The initial upload of linux-libre-4.4.41-gnu.tar.xz was corrupted.

* gnu/packages/linux.scm (linux-libre-4.4)[source]: Update hash.
 2017-01-10 11:04:13 -05:00
Ludovic Courtès
022c977258
gnu: libgit2, python-pygit2: Update to 0.25.1 [security fixes]. 
See <http://www.openwall.com/lists/oss-security/2017/01/10/5>.

* gnu/packages/version-control.scm (libgit2): Update to 0.25.1.
* gnu/packages/python.scm (python-pygit2): Update to 0.25.0.
 2017-01-10 15:49:49 +01:00
David Craven
f3e44f5cd0
gnu: Add btrfs-progs/static. 
* gnu/packages/linux.scm (btrfs-progs/static): New variable.
 2017-01-10 12:00:34 +01:00
David Craven
313880c73a
gnu: e2fsck/static: Only copy e2fsck. 
* gnu/packages/linux.scm (e2fsck/static)[arguments]: Only copy e2fsck.
  [synopsis, description]: Adjust accordingly.
 2017-01-10 11:58:11 +01:00
Ricardo Wurmus
f03168327f
gnu: Add pcc. 
* gnu/packages/c.scm (pcc): New variable.
 2017-01-10 11:30:42 +01:00
Ben Woodcroft
cba53c60d5
gnu: ruby-sqlite3: Update to 1.3.13. 
* gnu/packages/ruby.scm (ruby-sqlite3): Update to 1.3.13.
 2017-01-10 18:40:58 +10:00
Mark H Weaver
d33f889dac
gnu: linux-libre: Update to 4.9.2. 
* gnu/packages/linux.scm (%linux-libre-version, %linux-libre-hash)
(linux-libre): Update to 4.9.2.
 2017-01-09 22:42:32 -05:00
Mark H Weaver
75fd35b670
gnu: linux-libre@4.4: Update to 4.4.41. 
* gnu/packages/linux.scm (linux-libre-4.4): Update to 4.4.41.
 2017-01-09 22:41:21 -05:00
Alex Kost
28fd01bceb
gnu: emacs-guix: Update to 0.2.2. 
* gnu/packages/emacs.scm (emacs-guix): Update to 0.2.2.
 2017-01-10 00:23:07 +03:00
Alex Kost
f6b1dd233d
gnu: emacs-bui: Update to 1.1.0. 
* gnu/packages/emacs.scm (emacs-bui): Update to 1.1.0.
 2017-01-10 00:23:07 +03:00
ng0
5ed962263c
gnu: whois: Update to 5.2.14. 
* gnu/packages/networking.scm (whois): Update to 5.2.14.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2017-01-09 16:04:55 -05:00
Leo Famulari
5ba5b4b240
gnu: imagemagick: Update to 6.9.7-3. 
* gnu/packages/imagemagick.scm (imagemagick): Update to 6.9.7-3.
 2017-01-09 14:18:51 -05:00
John Darrington
4f903085ac
Revert "gnu: Update imagemagick to version 7.0.4-3." 
This reverts commit dea228cf12.
 2017-01-09 20:06:26 +01:00
Mathieu Lirzin
04927b6f26
gnu: cuirass: Update to 0.0.1 revision 3. 
* gnu/packages/ci.scm (cuirass): Update to 0.0.1 revision 3.
[arguments]: Move 'bootstrap' phase before 'configure'.  Disable
"tests/repo.scm" test.
 2017-01-09 18:57:15 +01:00
John Darrington
cac19f0df9
gnu: Update aqbanking to version 5.6.12. 
* gnu/packages/gnucash.scm (aqbanking): Update to version 5.6.12.
 2017-01-09 18:55:27 +01:00
John Darrington
dea228cf12
gnu: Update imagemagick to version 7.0.4-3. 
* gnu/packages/imagemagick.scm: Update to version 7.0.4-3
 2017-01-09 18:55:22 +01:00
José Miguel Sánchez García
84aafbbb66
gnu: Add nim. 
* gnu/packages/nim.scm: New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add nim.scm.
 2017-01-09 18:01:52 +01:00
David Craven
5d18d776d2
gnu: rustc: Retain binutils. 
* gnu/packages/rust.scm (rustc)[arguments]: Retain binutils. Add
  wrap-rustc phase.

Problem reported by Ben Woodcroft <donttrustben@gmail.com>.
 2017-01-09 18:01:52 +01:00
John Darrington
834458f6ff
gnu: Simplify the downloads from http://www.aquamaniac.de 
* gnu/packages/gnucash.scm (aqbanking, gwenhyfar): Remove dummy parameter
from source url.
 2017-01-09 17:50:49 +01:00
Christopher Allan Webber
ab4a1731d8
gnu: guile-8sync: Add #t at end of setenv phase. 
* gnu/packages/guile.scm: Add #t at end of setenv phase.
 2017-01-09 09:51:10 -06:00
Christopher Allan Webber
c5793e7eb7
gnu: Add guile-8sync. 
* gnu/packages/guile.scm (guile-8sync): New variable.
 2017-01-09 09:41:30 -06:00
Thomas Danckaert
7bbf2e39f7
gnu: hdf4: Update to 4.2.12. 
* gnu/packages/maths.scm (hdf4): Update to 4.2.12.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-01-09 15:55:57 +01:00
Maxim Cournoyer
392c26b0d1
gnu: python-pip: Update to 9.0.1 
* gnu/packages/python.scm (python-pip): Update to 9.0.1.
[native-inputs]: Remove.
[arguments]: New field.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-01-09 15:55:57 +01:00
Alex Sassmannshausen
814b18e587
gnu: Add Guile-ICS. 
* gnu/packages/guile.scm (guile-ics): New variable.
 2017-01-09 11:34:09 +01:00
Danny Milosavljevic
ee719fba2d
gnu: Add corrode. 
* gnu/packages/haskell.scm (corrode): New variable.

Co-authored-by: Ludovic Courtès <ludo@gnu.org>
 2017-01-09 10:44:52 +01:00
ng0
f048f12ba1
gnu: Add dotherside. 
* gnu/packages/qt.scm (dotherside): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-01-09 10:33:07 +01:00
ng0
bb0756c7c7
gnu: Add font-google-roboto. 
* gnu/packages/fonts.scm (font-google-roboto): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-01-09 10:33:07 +01:00
Mark H Weaver
96404be814
gnu: gdk-pixbuf: Update replacement to 2.36.3. 
* gnu/packages/gtk.scm (gdk-pixbuf/fixed): Update to 2.36.3.
 2017-01-08 23:42:03 -05:00
Mark H Weaver
86c41ec3e4
gnu: icecat: Add fixes from upstream mozilla-esr45. 
* gnu/packages/gnuzilla.scm (icecat)[source][patches]: Add selected fixes
from the upstream mozilla-esr45 repository.
 2017-01-08 20:36:29 -05:00
Mark H Weaver
989862005a
gnu: icecat: Rename patches that have been assigned CVEs. 
* gnu/packages/gnuzilla.scm (icecat)[source][patches]: Rename patches that
have since been assigned CVEs.
 2017-01-08 20:36:27 -05:00
Mark H Weaver
b9acdad717
gnu: gdk-pixbuf: Replace with 2.36.2. 
* gnu/packages/gtk.scm (gdk-pixbuf)[replacement]: New field.
(gdk-pixbuf/fixed): New variable.
(package/inherit): New macro.
(gdk-pixbuf+svg): Use 'package/inherit'.
 2017-01-08 20:36:20 -05:00
Clément Lassieur
84bf2a2e74
gnu: prosody: Make config and data files visible to 'prosodyctl'. 
* gnu/packages/messaging.scm (prosody)[arguments]: Add a 'fix-makefile' phase.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-01-08 23:38:49 +01:00
Clément Lassieur
5b4946180e
gnu: prosody: Add OpenSSL and Coreutils to the PATH of programs. 
* gnu/packages/messaging.scm (prosody)[arguments]: In 'wrap-programs'
phase, add 'openssl' and 'coreutils' to 'PATH'.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-01-08 23:37:06 +01:00
Ludovic Courtès
9e3e972d1e
gnu: Add fprintd. 
* gnu/packages/freedesktop.scm (fprintd): New variable.
 2017-01-08 23:26:47 +01:00
Ludovic Courtès
dfb01baec4
gnu: Add libfprint. 
* gnu/packages/freedesktop.scm (libfprint): New variable.
 2017-01-08 23:26:47 +01:00
David Craven
ec460a2a37
gnu: font-liberation: Use @item in @enumerate. 
* gnu/packages/fonts.scm (font-liberation)[description]: Use @item.

Followup to 0102fba27c.
 2017-01-08 23:00:55 +01:00
Mark H Weaver
3a3e309975
gnu: ruby-yard: Fix typo in source URI. 
This is a followup to commit 6499893ef8.

* gnu/packages/ruby.scm (ruby-yard)[source][uri]: Fix typo.
 2017-01-08 07:25:45 -05:00
Ben Woodcroft
6499893ef8
gnu: ruby-yard: Update to 0.9.6. 
* gnu/packages/ruby.scm (ruby-yard): Update to 0.9.6.
[source]: Use 'GitHub' source.
[arguments]: Run tests without 'Rakefile'.
[native-inputs]: Replace 'ruby-rspec-2' with ruby-rspec'.
* gnu/packages/patches/ruby-yard-fix-skip-of-markdown-tests.patch: Delete
file.
* gnu/local.mk (dist_patch_DATA): Remove it.
 2017-01-08 11:10:28 +10:00
Mark H Weaver
57fe28a082
gnu: linux-libre: Update to 4.9.1. 
* gnu/packages/linux.scm (%linux-libre-version, %linux-libre-hash)
(linux-libre): Update to 4.9.1.
* gnu/packages/linux-libre-4.8-x86_64.conf,
gnu/packages/linux-libre-4.8-i686.conf: Delete files.
* gnu/packages/linux-libre-4.9-x86_64.conf,
gnu/packages/linux-libre-4.9-i686.conf: New files.
* Makefile.am (KCONFIGS): Update accordingly.
 2017-01-07 19:42:36 -05:00
Mark H Weaver
0860081413
gnu: linux-libre@4.4: Update to 4.4.40. 
* gnu/packages/linux.scm (linux-libre-4.4): Update to 4.4.40.
 2017-01-07 19:42:23 -05:00
Leo Famulari
1c9cea74b4
gnu: python-pygpgme: Fix build failure. 
* gnu/packages/patches/python-pygpgme-fix-pinentry-tests.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/gnupg.scm (python-pygpgme, python2-pygpgme)[source]: Use it.
 2017-01-07 19:00:58 -05:00
Clément Lassieur
261f56914c
gnu: econnman: Add missing input. 
* gnu/packages/connman.scm (econnman)[inputs]: Add python2-dbus.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-01-07 23:02:48 +01:00
Alex Griffin
2b84170782
gnu: gnome-mpv: Update to 0.11. 
* gnu/packages/video.scm (gnome-mpv): Update to 0.11.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-01-07 22:55:40 +01:00
Thomas Danckaert
e10872cc83
gnu: gpgme: Patch CMake files. 
* gnu/packages/gnupg.scm (gpgme)[arguments]: Substitute '@libsuffix@' by
  '.so'.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-01-07 22:55:40 +01:00
Ludovic Courtès
b2859a4fef
gnu: zlib: Fix alternate download URL. 
* gnu/packages/compression.scm (zlib)[source](uri): Update SourceForge URL.
 2017-01-07 22:55:40 +01:00
Leo Famulari
9385f0e9cb
Revert "gnu: nspr: Update to 4.13.1." 
There were many reports that NSS failed to build with this change.

This reverts commit 707c65aad7.
 2017-01-07 15:38:30 -05:00
Ludovic Courtès
d7d5050c51
gnu: ao-cad: Point 'LD_LIBRARY_PATH' to Mesa. 
* gnu/packages/engineering.scm (ao)[arguments]: In
'install-guile-bindings', wrap 'ao-guile' to set 'LD_LIBRARY_PATH'.
[inputs]: Add MESA.
 2017-01-07 00:38:03 +01:00
Tobias Geerinckx-Rice
a2bd16ff99
gnu: vim: Update to 8.0.0147. 
* gnu/packages/vim.scm (vim, vim-full): Update to 8.0.0147.
 2017-01-07 00:26:23 +01:00
Tobias Geerinckx-Rice
0102fba27c
gnu: font-liberation: Use @enumerate in description. 
* gnu/packages/fonts.scm (font-liberation)[description]: Use @enumerate.
 2017-01-07 00:26:22 +01:00
Tobias Geerinckx-Rice
b4774d87e4
gnu: fonts: Improve synopses & descriptions. 
* gnu/packages/fonts.scm (font-google-noto, font-hack)[synopsis,
description]: Fix typos, grammar, and general style only.
(font-dejavu, font-terminus, font-wqy-zenhei)[description]: Likewise.
 2017-01-07 00:26:22 +01:00
Tobias Geerinckx-Rice
8837860c66
gnu: fonts: Use install-file where appropriate. 
* gnu/packages/fonts.scm (font-ubuntu, font-dejavu, font-bitstream-vera,
font-gnu-freefont-ttf, font-liberation, font-wqy-zenhei, font-anonymous-pro,
font-google-noto, font-un, font-hack): Substitute the simpler INSTALL-FILE
for every COPY-FILE invoked with redundant arguments.
 2017-01-07 00:26:12 +01:00
Tobias Geerinckx-Rice
9657aeb187
gnu: python-tblib: Properly @end enumerate. 
* gnu/packages/python.scm (python-tblib)[description]: Don't use
‘@end itemize’ to end an ‘@enumerate’ block.
 2017-01-07 00:23:53 +01:00
Leo Famulari
aa21c764d6
gnu: python-pycrypto: Fix CVE-2013-7459. 
* gnu/packages/patches/python-pycrypto-CVE-2013-7459.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/python.scm (python-pycrypto, python2-pycrypto)[source]: Use the
patch. Use pypi-uri.
 2017-01-06 13:50:18 -05:00
Leo Famulari
707c65aad7
gnu: nspr: Update to 4.13.1. 
* gnu/packages/gnuzilla.scm (nspr): Update to 4.13.1.
 2017-01-06 13:09:05 -05:00
Ricardo Wurmus
3a3bf2f819
gnu: Add r-copywriter. 
* gnu/packages/bioinformatics.scm (r-copywriter): New variable.
 2017-01-06 16:31:19 +01:00
Ricardo Wurmus
d407bdb931
gnu: Add r-copyhelper. 
* gnu/packages/bioinformatics.scm (r-copyhelper): New variable.
 2017-01-06 16:31:14 +01:00
Ricardo Wurmus
6193563a36
gnu: Add r-chipseq. 
* gnu/packages/bioinformatics.scm (r-chipseq): New variable.
 2017-01-06 16:31:02 +01:00
Christopher Baines
fab2784dbb
gnu: gnome-tweak-tool: Add missing inputs. 
* gnu/packages/gnome.scm (gnome-tweak-tool)[inputs]: Add gnome-desktop
and libsoup.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-01-06 10:23:27 +01:00
Christopher Baines
adb41527ad
gnu: gnome-tweak-tool: Make propagated-inputs just inputs. 
* gnu/packages/gnome.scm (gnome-tweak-tool)[propagated-inputs]: Merge
with...
[inputs]: ... this.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-01-06 10:23:27 +01:00
Christopher Baines
9af6bce1e1
gnu: gnome-tweak-tool: Wrap program to set 'GI_TYPELIB_PATH'. 
* gnu/packages/gnome.scm (gnome-tweak-tool)[arguments]: Add
'wrap-program' phase.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-01-06 10:23:27 +01:00
Christopher Baines
7ef335b0e8
gnu: gnome-tweak-tool: Use glib-or-gtk-build-system. 
This allows gobject introspection namespaces to be found.

* gnu/packages/gnome.scm (gnome-tweak-tool)[build-system]: Set to
GLIB-OR-GTK-BUILD-SYSTEM.
[arguments]: Use %GLIB-OR-GTK-BUILD-SYSTEM-MODULES in #:imported-modules.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-01-06 10:23:27 +01:00
Ben J Woodcroft
dbf9d37114
gnu: bioruby: Update to 1.5.1. 
* gnu/packages/bioinformatics.scm (bioruby): Update to 1.5.1.
 2017-01-06 19:06:07 +10:00
Ben J Woodcroft
0c37e2a3d2
gnu: cd-hit: Update to 4.6.6. 
* gnu/packages/bioinformatics.scm (cd-hit): Update to 4.6.6.
 2017-01-06 19:06:03 +10:00
Leo Famulari
e50d5b8c9d
gnu: khal: Disable failing tests. 
* gnu/packages/patches/khal-disable-failing-tests.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/calendar.scm (khal): Use it.
 2017-01-06 03:19:40 -05:00
Leo Famulari
e0c32fc817
gnu: vdirsyncer: Update to 0.14.1. 
* gnu/packages/dav.scm (vdirsyncer): Update to 0.14.1.
 2017-01-06 03:19:40 -05:00
Leo Famulari
491b78a8e8
gnu: python-icalendar: Update to 3.11.1. 
* gnu/packages/python.scm (python-icalendar): Update to 3.11.1.
 2017-01-06 03:19:36 -05:00
Ludovic Courtès
fbec5abeef
gnu: gv: Do not propagate Ghostscript. 
* gnu/packages/gv.scm (gv)[propagated-inputs]: Remove.
[arguments]: New field.
[inputs]: Add GHOSTCRIPT/X.
 2017-01-05 23:45:38 +01:00
Alex Kost
ec14d2157d
gnu: emacs-smartparens: Update to 1.9.0. 
* gnu/packages/emacs.scm (emacs-smartparens): Update to 1.9.0.
 2017-01-06 00:31:03 +03:00
Alex Kost
922ab34446
gnu: magit: Update to 2.10.0. 
* gnu/packages/emacs.scm (magit, emacs-magit-popup): Update to 2.10.0.
 2017-01-06 00:29:23 +03:00
Alex Kost
cfb9026aa5
gnu: emacs-with-editor: Update to 2.5.9. 
* gnu/packages/emacs.scm (emacs-with-editor): Update to 2.5.9.
 2017-01-06 00:29:23 +03:00
Danny Milosavljevic
6c8a387af2
gnu: Add ghc-markdown-unlit. 
* gnu/packages/haskell.scm (ghc-markdown-unlit): New variable.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
 2017-01-05 18:47:40 +01:00
Tobias Geerinckx-Rice
12c15242f4
gnu: beep: Ignore substitute* return value. 
* gnu/packages/terminals.scm (beep)[arguments]: End 'patch-makefile phase
with truth.
 2017-01-05 17:40:54 +01:00
David Thompson
543bd0eede
gnu: sdl2: Add fcitx input. 
* gnu/packages/sdl.scm (sdl2)[inputs]: Add fcitx.
 2017-01-05 11:27:10 -05:00
David Thompson
e0101b54b7
gnu: sdl2: Fix double input events bug. 
* gnu/packages/sdl.scm (sdl2)[inputs]: Add dbus, gblib, and ibus.
 2017-01-05 11:22:32 -05:00
Leo Famulari
f537ad0bf3
Revert "gnu: gawk: Don't replace 'sh' reference with 'bash'." 
This commit causes too many rebuilds. It will be re-committed to core-updates.

This reverts commit 5b2834ae79.
 2017-01-05 11:22:07 -05:00
Leo Famulari
5b2834ae79
gnu: gawk: Don't replace 'sh' reference with 'bash'. 
* gnu/packages/gawk.scm (gawk)[arguments]: Use /bin/sh instead of /bin/bash in
'set-shell-file-name' phase.
 2017-01-05 11:06:06 -05:00
Marius Bakke
d9d23101ce
gnu: irssi: Update to 1.0.0. 
* gnu/packages/irc.scm (irssi): Update to 1.0.0.
[arguments]: Remove --with-ncurses configure flag.
[native-inputs]: Move 'perl' to ...
[inputs]: ... here.
[home-page]: Use HTTPS.
 2017-01-05 16:44:34 +01:00
Marius Bakke
1bd858cc14
gnu: Fix indentation of some python packages. 
This is a followup to abe2ec73..807a5b32.

* gnu/packages/python.scm (python-snowballstemmer,
  python-sphinx-cloud-sptheme, python-sphinx-alabaster-theme): Fix indentation.
 2017-01-05 16:28:01 +01:00
Danny Milosavljevic
807a5b32bf
gnu: Add python-sphinx-alabaster-theme. 
* gnu/packages/python.scm (python-sphinx-alabaster-theme,
  python2-sphinx-alabaster-theme): New variables.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
 2017-01-05 16:17:27 +01:00
Danny Milosavljevic
754bfd7019
gnu: Add python-sphinx-cloud-sptheme. 
* gnu/packages/python.scm (python-sphinx-cloud-sptheme,
  python2-sphinx-cloud-sptheme): New variables.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
 2017-01-05 16:17:27 +01:00
Danny Milosavljevic
89cd988b6c
gnu: Add python-snowballstemmer. 
* gnu/packages/python.scm (python-snowballstemmer,
  python2-snowballstemmer): New variables.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
 2017-01-05 16:17:26 +01:00
José Miguel Sánchez García
abe2ec735f
gnu: Add beep. 
* gnu/packages/terminals.scm (beep): New variable.

Co-authored-by: Tobias Geerinckx-Rice <me@tobias.gr>
 2017-01-05 13:09:19 +01:00
Tobias Geerinckx-Rice
88a46c9812
gnu: Remove unused module import from (gnu packages mtools). 
This is a follow-up to commit 3b0f2ba46b.

* gnu/packages/mtools.scm: Remove import of (gnu packages python).
 2017-01-05 13:09:19 +01:00
Ben Woodcroft
19e5fb6030
gnu: ruby-nokogiri: Update to 1.7.0.1. 
* gnu/packages/ruby.scm (ruby-nokogiri): Update to 1.7.0.1.
 2017-01-05 21:00:51 +10:00
Ben Woodcroft
8e941f2068
gnu: ruby-hoe: Update to 3.16.0. 
* gnu/packages/ruby.scm (ruby-hoe): Update to 3.16.0.
 2017-01-05 20:52:22 +10:00
Leo Famulari
5f0fabec54
gnu: unrtf: Fix CVE-2016-10091. 
* gnu/packages/patches/unrtf-CVE-2016-10091.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/unrtf.scm (unrtf)[source]: Use it.
 2017-01-04 14:42:58 -05:00
Alex Griffin
7a203059d3
gnu: libreoffice: Update to 5.1.6.2. 
* gnu/packages/libreoffice.scm (libreoffice): Update to 5.1.6.2.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2017-01-04 14:37:58 -05:00
David Craven
3dcaa1226d
gnu: ocamlmod: Enable tests. 
Followup to 93eeadf022.

* gnu/packages/ocaml.scm (ocamlmod)[arguments]: Enable tests.

Problem reported by Julien Lepiller <julien@lepiller.eu>.
 2017-01-04 19:10:01 +01:00
David Craven
337273e41f
gnu: ocaml-ounit: Enable tests. 
Followup to 7a76b4afd0.

* gnu/packages/ocaml.scm (ocaml-ounit)[arguments]: Enable tests.

Problem reported by Julien Lepiller <julien@lepiller.eu>.
 2017-01-04 19:10:00 +01:00
Efraim Flashner
9c64f76e8a
gnu: aria2: Update to 1.30.0. 
* gnu/packages/bittorrent.scm (aria2): Update to 1.30.0.
 2017-01-04 19:15:00 +02:00
Ricardo Wurmus
68f9067324
gnu: inkscape: Update to 0.92.0. 
* gnu/packages/patches/inkscape-drop-wait-for-targets.patch: Remove it.
* gnu/local.mk (dist_patch_DATA): Remove it.
* gnu/packages/inkscape.scm (inkscape): Update to 0.92.0.
[build-system]: Use "cmake-build-system".
[native-inputs]: Add glib:bin.
[arguments]: Remove obsolete arguments; disable tests.
 2017-01-04 18:06:44 +01:00
Julien Lepiller
6548e53fcb
gnu: Add ocaml-cmdliner. 
* gnu/packages/ocaml.scm (ocaml-cmdliner): New variable.

Signed-off-by: David Craven <david@craven.ch>
 2017-01-04 17:41:11 +01:00
Julien Lepiller
eb1ba73185
gnu: Add ocaml-mtime. 
* gnu/packages/ocaml.scm (ocaml-mtime): New variable.

Signed-off-by: David Craven <david@craven.ch>
 2017-01-04 17:41:11 +01:00
Julien Lepiller
63147e5e1e
gnu: Add ocaml-rresult. 
* gnu/packages/ocaml.scm (ocaml-rresult): New variable.

Signed-off-by: David Craven <david@craven.ch>
 2017-01-04 17:41:11 +01:00
Julien Lepiller
a359c7277c
gnu: Add ocaml-topkg. 
* gnu/packages/ocaml.scm (ocaml-topkg): New variable.

Signed-off-by: David Craven <david@craven.ch>
 2017-01-04 17:41:11 +01:00
Julien Lepiller
704b990c36
gnu: Add ocaml-result. 
* gnu/packages/ocaml.scm (ocaml-result): New variable.

Signed-off-by: David Craven <david@craven.ch>
 2017-01-04 17:41:11 +01:00
Julien Lepiller
44c23cb8d8
gnu: Add ocaml-bitstring. 
* gnu/packages/ocaml.scm (ocaml-bitstring): New variable.
* gnu/packages/patches/ocaml-bitstring-fix-configure.patch: New file.
* gnu/local.mk (dist_patch_DATA): New patch.

Signed-off-by: David Craven <david@craven.ch>
 2017-01-04 17:41:11 +01:00
Julien Lepiller
a5b5bd1d18
gnu: Add ocaml-bisect. 
* gnu/packages/ocaml.scm (ocaml-bisect): New variable.
* gnu/packages/patches/ocaml-bisect-fix-camlp4-in-another-directory.patch:
  New file.
* gnu/local.mk (dist_patch_DATA): Add patch.

Signed-off-by: David Craven <david@craven.ch>
 2017-01-04 17:41:10 +01:00
Julien Lepiller
3d598ebd35
gnu: Add ocaml-stringext. 
* gnu/packages/ocaml.scm (ocaml-stringext): New variable.

Signed-off-by: David Craven <david@craven.ch>
 2017-01-04 17:41:10 +01:00
Julien Lepiller
0472836fce
gnu: Add ocaml-qtest. 
* gnu/packages/ocaml.scm (ocaml-qtest): New variable.

Signed-off-by: David Craven <david@craven.ch>
 2017-01-04 17:41:10 +01:00
Julien Lepiller
ff891f10ed
gnu: Add ocaml-frontc. 
* gnu/packages/ocaml.scm (ocaml-frontc): New variable.

Signed-off-by: David Craven <david@craven.ch>
 2017-01-04 17:41:10 +01:00
Ludovic Courtès
a614ce389f
gnu: Add Guile-Bash. 
* gnu/packages/guile.scm (guile-bash): New variable.
 2017-01-04 16:18:52 +01:00
Julien Lepiller
ddf2b503b1
gnu: Add ocaml-zarith. 
* gnu/packages/ocaml.scm (ocaml-zarith): New variable.

Signed-off-by: David Craven <david@craven.ch>
 2017-01-04 16:05:28 +01:00
Julien Lepiller
93eeadf022
gnu: Add ocamlmod. 
* gnu/packages/ocaml.scm (ocamlmod): New variable.

Signed-off-by: David Craven <david@craven.ch>
 2017-01-04 16:05:25 +01:00
Julien Lepiller
bc2c3bc627
gnu: Add camlzip. 
* gnu/packages/ocaml.scm (camlzip): New variable.

Signed-off-by: David Craven <david@craven.ch>
 2017-01-04 16:05:06 +01:00
Julien Lepiller
7a76b4afd0
gnu: Add ocaml-ounit. 
* gnu/packages/ocaml.scm (ocaml-ounit): New variable.

Signed-off-by: David Craven <david@craven.ch>
 2017-01-04 16:04:51 +01:00
Julien Lepiller
ad3d730e3a
gnu: camlp4: Install camlp4 META file. 
* gnu/packages/ocaml.scm (camlp4)[arguments]: Install in OCAMLPATH and
  META file.
  (ocaml-findlib)[arguments]: Delete camlp4 META file.

Signed-off-by: David Craven <david@craven.ch>
 2017-01-04 16:04:32 +01:00
Julien Lepiller
56f73eadc0
gnu: ocaml: Use a helper function to download from ocaml-forge. 
* gnu/packages/ocaml.scm (ocaml-forge-origin): New procedure.
  (lablgtk)[origin]: Use it.

Signed-off-by: David Craven <david@craven.ch>
 2017-01-04 16:03:56 +01:00
Julien Lepiller
e6876cb9dc
gnu: Add ocaml-build-system. 
* guix/build/ocaml-build-system.scm: New file.
* guix/build-system/ocaml.scm: New file.
* Makefile.am (MODULES): Add them.
* gnu/packages/ocaml.scm (ocaml)[native-search-paths]: Adjuste OCAMLPATH.

Signed-off-by: David Craven <david@craven.ch>
 2017-01-04 16:03:39 +01:00
Julien Lepiller
e0ddaa8be3
gnu: camlp4: Compile native version. 
* gnu/packages/ocaml.scm (camlp4)[arguments]: Disable parallel-build.
  Change default target to "all" to compile native and byte version.

Signed-off-by: David Craven <david@craven.ch>
 2017-01-04 16:03:16 +01:00
David Craven
2b1f7b83f7
gnu: ocaml: Fix indentation. 
* gnu/packages/ocaml.scm (ocaml): Fix indentation.
 2017-01-04 16:03:07 +01:00
Julien Lepiller
796a17ab01
gnu: ocaml: Add CAML_LD_LIBRARY_PATH search-path. 
* gnu/packages/ocaml.scm (ocaml)[native-search-paths]: Add
  CAML_LD_LIBRARY_PATH.

Signed-off-by: David Craven <david@craven.ch>
 2017-01-04 16:03:00 +01:00
Julien Lepiller
8bd10c1082
gnu: ocaml: Add a .file directive to generated .s files. 
* gnu/packages/ocaml.scm (ocaml)[origin]: Add patch.
* gnu/packages/patches/ocaml-Add-a-.file-directive.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add patch.

Signed-off-by: David Craven <david@craven.ch>
 2017-01-04 16:02:38 +01:00
David Craven
1ff755d1d5
gnu: Reorder imports in (gnu packages ocaml). 
* gnu/packages/ocaml.scm: Reorder imports alphabetically.
 2017-01-04 14:07:56 +01:00
David Craven
d8e0a08c26
gnu: Use 'license:' prefix in (gnu packages ocaml). 
* gnu/packages/ocaml.scm (ocaml, opam, camlp4, camlp5, hevea, coq,
  proof-general, ocaml-menhir, lablgtk, unison, ocaml-findlib)[license]:
  Add prefix.
 2017-01-04 14:07:56 +01:00
David Craven
3254e1aba9
gnu: Add idris-lens. 
* gnu/packages/idris.scm (idris-lens): New variable.
 2017-01-04 12:11:14 +01:00
David Craven
5a16d828b3
gnu: Add idris-bifunctors. 
* gnu/packages/idris.scm (idris-bifunctors): New variable.
 2017-01-04 12:11:14 +01:00
David Craven
4e17fff386
gnu: Add idris-wl-pprint. 
* gnu/packages/idris.scm (idris-wl-pprint): New variable.
 2017-01-04 12:11:14 +01:00
David Craven
ea3b38f1e1
gnu: Add idris-lightyear. 
* gnu/packages/idris.scm (idris-lightyear, idris-default-arguments):
  New variables.
 2017-01-04 12:11:14 +01:00
David Craven
ae482ce12d
gnu: idris: Move to (gnu packages idris). 
* gnu/packages/haskell.scm: Move 'idris' to...
* gnu/packages/idris.scm: New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add idris.scm.
 2017-01-04 11:51:36 +01:00
David Craven
c7a7129c5a
gnu: idris: Update to 0.99. 
* gnu/packages/haskell.scm (idris): Update to 0.99.
 2017-01-04 11:44:07 +01:00
David Craven
c0d5b6452b
gnu: Order module imports in (gnu packages haskell) alphabetically. 
* gnu/packages/haskell.scm: Order module imports alphabetically.
 2017-01-04 11:44:07 +01:00
Ricardo Wurmus
de793e9a5a
gnu: ghc-language-c: Fix up. 
* gnu/packages/haskell.scm (ghc-language-c): Fix up indentation and
description.
 2017-01-04 11:41:43 +01:00
David Craven
3b7ccbe94c
build-system: cargo: Use correct cargo. 
* gnu/packages/rust.scm (cargo-bootstrap): Make private.
* guix/build-system/cargo.scm (default-cargo): Use cargo.
 2017-01-04 11:29:15 +01:00
David Craven
b5a09649db
gnu: Add cargo. 
* gnu/packages/rust.scm (cargo): New variable.
 2017-01-04 11:29:14 +01:00
Danny Milosavljevic
2d2388e243
gnu: Add ghc-language-c. 
* gnu/packages/haskell.scm (ghc-language-c): New variable.
 2017-01-04 11:27:24 +01:00
Leo Famulari
324f4fc559
gnu: mcrypt: Fix patches for CVE-2012-{4409,4527}. 
This fixes CVE-2012-{4409,4527}.

This is a followup to commit fd1461879c.

* gnu/packages/patches/mcrypt-CVE-2012-4409.patch,
gnu/packages/patches/mcrypt-CVE-2012-4527.patch: Apply the patches to the mcrypt
source code.
 2017-01-04 02:46:51 -05:00
Alex Griffin
37e8a2e219
gnu: calibre: Update to 2.76.0. 
* gnu/packages/ebook.scm (calibre): Update to 2.76.0.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2017-01-04 00:00:34 -05:00
Alex Griffin
f7e9f1cadc
gnu: feh: Update to 2.18. 
* gnu/packages/image-viewers.scm (feh): Update to 2.18.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2017-01-03 23:39:22 -05:00
Alex Griffin
eb5378f902
gnu: bs1770gain: Update to 0.4.12. 
* gnu/packages/audio.scm (bs1770gain): Update to 0.4.12.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2017-01-03 23:39:22 -05:00
Alex Griffin
648733dc14
gnu: dwm: Update to 6.1. 
* gnu/packages/suckless.scm (dwm): Update to 6.1.
[inputs]: Add libxft and freetype.
[arguments]: Set FREETYPEINC in #:make-flags.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2017-01-03 23:39:22 -05:00
Alex Griffin
bc47382a5d
gnu: dmenu: Update to 4.6. 
* gnu/packages/suckless.scm (dmenu): Update to 4.6.
[inputs]: Add libxft and freetype.
[arguments]: Set FREETYPEINC in #:make-flags.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2017-01-03 23:39:21 -05:00
Alex Griffin
f3a53f3c8f
gnu: slock: Update to 1.4. 
* gnu/packages/suckless.scm (slock): Update to 1.4.
[source] Remove CVE-2016-6866 patch (no longer needed).
* gnu/packages/patches/slock-CVE-2016-6866.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2017-01-03 23:39:21 -05:00
Alex Griffin
8efd807f95
gnu: trash-cli: Update to 0.17.1.1. 
* gnu/packages/shellutils.scm (trash-cli): Update to 0.17.1.1.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2017-01-03 23:39:21 -05:00
Tobias Geerinckx-Rice
3b40213923
gnu: Add wimlib. 
* gnu/packages/backup.scm (wimlib): New variable.
 2017-01-04 05:14:22 +01:00
Tobias Geerinckx-Rice
835d371f4b
gnu: parallel: Update to 20161222. 
* gnu/packages/parallel.scm (parallel): Update to 20161222.
 2017-01-04 05:14:22 +01:00
Tobias Geerinckx-Rice
0b2a91d8b7
gnu: global: Update to 6.5.6. 
* gnu/packages/code.scm (global): Update to 6.5.6.
 2017-01-04 05:14:22 +01:00
Tobias Geerinckx-Rice
02dadd3827
gnu: nano: Update to 2.7.3. 
* gnu/packages/nano.scm (nano): Update to 2.7.3.
 2017-01-04 05:14:22 +01:00
Tobias Geerinckx-Rice
3b3b60d037
gnu: Use HTTPS for all sourceforge.net home pages. 
* gnu/packages/admin.scm (mingetty, clusterssh)[home-page]: Use HTTPS.
* gnu/packages/audio.scm (libbs2b, soxr)[home-page]: Likewise.
* gnu/packages/bioinformatics.scm (bless)[home-page]: Likewise.
* gnu/packages/display-managers.scm (slim)[home-page]: Likewise.
* gnu/packages/games.scm (extremetuxracer)[home-page]: Likewise.
* gnu/packages/ghostscript.scm (gs-fonts)[home-page]: Likewise.
* gnu/packages/haskell.scm (ghc-regex-base, ghc-regex-posix,
ghc-regex-compat)[home-page]: Likewise.
* gnu/packages/image.scm (imlib2)[home-page]: Likewise.
* gnu/packages/libreoffice.scm (librevenge, libcmis, libodfgen, libmwaw)
[home-page]: Likewise.
* gnu/packages/linux.scm (hdparm, acpid, libavc1394, rng-tools)
[home-page]: Likewise.
* gnu/packages/mail.scm (esmtp)[home-page]: Likewise.
* gnu/packages/mp3.scm (ripperx)[home-page]: Likewise.
* gnu/packages/onc-rpc.scm (libtirpc)[home-page]: Likewise.
* gnu/packages/perl.scm (perl-czplib)[home-page]: Likewise.
* gnu/packages/python.scm (python-pyasn1-modules)[home-page]: Likewise.
* gnu/packages/xdisorg.scm (xosd)[home-page]: Likewise.
 2017-01-04 05:14:22 +01:00
Christopher Baines
0916dc526e
gnu: Add emacs-git-gutter 
* gnu/packages/emacs.scm (emacs-git-gutter): New variable.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2017-01-03 22:46:55 -05:00
Kei Kebreau
ea5cc29561
gnu: supertux: Update to 0.5.1. 
* gnu/packages/games.scm (supertux): Update to 0.5.1.
 2017-01-03 18:07:45 -05:00
Leo Famulari
f339f2773d
gnu: assword: Update to 0.10. 
* gnu/packages/password-utils.scm (assword): Update to 0.10.
[arguments]: Use Python 3 instead of Python 2.
[inputs]: Use Python 3 variants of inputs. Replace python2-pygpgme with
python-gpg. Remove python2-pygtk. Add python-pygobject.
[native-inputs]: Replace help2man with txt2man.
[arguments]: Remove PYTHONPATH from 'Makefile' in the 'manpage' phase.
 2017-01-03 12:35:45 -05:00
Leo Famulari
7637de2313
gnu: Add python-xdo. 
* gnu/packages/python.scm (python-xdo): New variable.
(python2-xdo): Use package-with-python2.
 2017-01-03 12:35:44 -05:00
Leo Famulari
e871c332a0
gnu: python2-xdo: Update to 0.3. 
* gnu/packages/python.scm (python2-xdo): Update to 0.3.
 2017-01-03 12:35:44 -05:00
Leo Famulari
e3dd1f0cb8
gnu: Add python-gpg. 
* gnu/packages/gnupg.scm (python-gpg, python2-gpg): New variable.
 2017-01-03 12:35:44 -05:00
Leo Famulari
9e0f16f23f
gnu: gpgme: Update to 1.8.0. 
* gnu/packages/gnupg.scm (gpgme): Update to 1.8.0.
[arguments]: Don't set 'GPG=gpg2' in #:configure-flags. GnuPG-2.x is
installed as 'gpg' on Guix.
 2017-01-03 12:35:44 -05:00
Ludovic Courtès
70c6341110
gnu: Add Zile-on-Guile. 
* gnu/packages/zile.scm (zile-on-guile): New variable.
 2017-01-03 18:16:01 +01:00
Marius Bakke
e2c3037427
gnu: pcsc-lite: Update to 1.8.20 [fixes CVE-2016-10109]. 
* gnu/packages/security-token.scm (pcsc-lite): Update to 1.8.20.
 2017-01-03 17:15:04 +01:00
Manolis Ragkousis
367f701379
gnu: glibc-hurd: Disable werror. 
* gnu/packages/base.scm (glibc/hurd)[arguments]: Add "--disable-werror".
 2017-01-03 16:00:43 +02:00
Manolis Ragkousis
62596a158b
gnu: Use hurd-triplet? to check if GNU/Hurd. 
* gnu/packages/make-bootstrap.scm (hurd-triplet?): Move it from here..
* gnu/packages/hurd.scm: ..to here. New exported procedure.
* gnu/packages/commencement.scm (glibc-final-with-bootstrap-bash)
  [arguments]: Replace string-match.
  [inputs]: Same.
* gnu/packages/cross-base.scm (cross-libc)[native-inputs]: Same.
 2017-01-03 16:00:39 +02:00
Kei Kebreau
6a37872cd2
gnu: chicken: Fix CVE-2016-{6830,6831}. 
* gnu/packages/patches/chicken-CVE-2016-6830+CVE-2016-6831.patch: New file.
* gnu/local.mk (dist_patch_DATA): Use it.
* gnu/packages/scheme.scm (chicken)[source]: Use it.
 2017-01-03 08:35:02 -05:00
Kei Kebreau
b9b6db45e8
gnu: chicken: Update to 4.11.1. 
* gnu/packages/scheme.scm (chicken): Update to 4.11.1.
 2017-01-03 08:34:54 -05:00
Roel Janssen
7b030c9f9b
gnu: r-plotrix: Update to 3.6-4. 
* gnu/packages/statistics.scm (r-plotrix): Update to 3.6-4.
 2017-01-03 13:51:05 +01:00
Roel Janssen
0c74399d98
gnu: r-git2r: Update to 0.18.0. 
* gnu/packages/statistics.scm (r-git2r): Update to 0.18.0.
 2017-01-03 13:49:18 +01:00
Roel Janssen
807db78fc9
gnu: r-hmisc: Update to 4.0-2. 
* gnu/packages/statistics.scm (r-hmisc): Update to 4.0-2.
  [propagated-inputs]: Add r-base64enc.
 2017-01-03 13:46:14 +01:00
Roel Janssen
437d064dc5
gnu: r-openssl: Update to 0.9.6. 
* gnu/packages/statistics.scm (r-openssl): Update to 0.9.6.
 2017-01-03 13:39:51 +01:00
Roel Janssen
596fcfac88
gnu: r-jsonlite: Update to 1.2. 
* gnu/packages/web.scm (r-jsonlite): Update to 1.2.
 2017-01-03 13:37:55 +01:00
Roel Janssen
da13738ef0
gnu: r-ggplot2: Update to 2.2.1. 
* gnu/packages/statistics.scm (r-ggplot2): Update to 2.2.1.
 2017-01-03 13:34:53 +01:00
Roel Janssen
407a280103
gnu: r-genomicranges: Update to 1.26.2. 
* gnu/packages/bioinformatics.scm (r-genomicranges): Update to 1.26.2.
 2017-01-03 13:28:35 +01:00
Roel Janssen
ac370a3397
gnu: r-genomeinfodb: Update to 1.10.2. 
* gnu/packages/bioinformatics.scm (r-genomeinfodb): Update to 1.10.2.
 2017-01-03 12:47:36 +01:00
Efraim Flashner
4fb14fad94
gnu: sudo: Update to 1.8.19p1. 
* gnu/packages/admin.scm (sudo): Update to 1.8.19p1.
 2017-01-03 10:12:27 +02:00
Brandon Ludwig
b1251a2f96
gnu: arc-theme: Update to 20161119. 
* gnu/packages/gnome.scm (arc-theme): Update to 20161119.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2017-01-03 00:29:42 -05:00
Maxim Cournoyer
6155186838
gnu: gimp: Enable PDF support 
* gnu/packages/gimp.scm (gimp)[inputs]: Add poppler.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2017-01-03 00:18:51 -05:00
Leo Famulari
47932c0d44
gnu: lynx: Update to 2.8.9dev.11 [fixes CVE-2016-9179]. 
* gnu/packages/lynx.scm (lynx): Update to 2.8.9dev.11.
 2017-01-02 23:52:12 -05:00
Leo Famulari
b3e2ea8d48
gnu: Add sonic. 
* gnu/packages/speech.scm (sonic): New variable.
 2017-01-02 18:03:10 -05:00
Mathieu OTHACEHE
5819431c59
gnu: Add cmst. 
* gnu/packages/connman.scm (cmst): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-01-02 22:55:33 +01:00
Mathieu OTHACEHE
125e3cdece
gnu: connman: Add dependency on polkit. 
* gnu/packages/connman.scm (connman)[arguments]: Add "--enable-polkit".
[inputs]: Add POLKIT.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-01-02 22:55:33 +01:00
Efraim Flashner
832d60dc01
gnu: mpv: Update to 0.23.0. 
* gnu/packages/video.scm (mpv): Update to 0.23.0.
 2017-01-02 21:48:49 +02:00
Efraim Flashner
8d2de491e5
gnu: openvpn: Update to 2.3.14. 
* gnu/packages/vpn.scm (openvpn): Update to 2.3.14.
 2017-01-02 21:48:48 +02:00
Efraim Flashner
68b3627cd6
gnu: ffmpeg@2.8: Update to 2.8.10. 
* gnu/packages/video.scm (ffmpeg@2.8): Update to 2.8.10.
 2017-01-02 21:48:48 +02:00
Efraim Flashner
4b50daab00
gnu: jasper: Update to 2.0.10. 
* gnu/packages/image.scm (jasper): Update to 2.0.10.
 2017-01-02 21:48:38 +02:00
Ludovic Courtès
1a49a10a94
gnu: fftw: Factorize creation of the --enable-threads variant. 
* gnu/packages/algebra.scm (pthread-variant): New procedure.
(fftw-with-threads, fftwf-with-threads): Use it.
 2017-01-02 14:54:24 +01:00
Ludovic Courtès
7355634db3
gnu: Disambiguate packages with the same name. 
* gnu/packages/algebra.scm (fftw-with-threads, fftwf-with-threads): Add
'name' field.
* gnu/packages/llvm.scm (llvm-for-extempore): Likewise.
 2017-01-02 14:54:24 +01:00
Ludovic Courtès
9af076245f
gnu: gfortran: Remove non-'eq?' duplicate of gfortran@4.9. 
* gnu/packages/gcc.scm (gfortran): Turn into an alias for GFORTRAN-4.9.
 2017-01-02 14:54:24 +01:00
Tobias Geerinckx-Rice
1b5ea0922f
gnu: python-s3transfer: Update to 0.1.10. 
* gnu/packages/python.scm (python-s3transfer): Update to 0.1.10.
 2017-01-02 08:37:26 +01:00
Tobias Geerinckx-Rice
1f89fb1691
gnu: python-greenlet: Update to 0.4.11. 
* gnu/packages/python.scm (python-greenlet): Update to 0.4.11.
 2017-01-02 08:37:25 +01:00
Tobias Geerinckx-Rice
3753f2e6e9
gnu: python-mako: Update to 1.0.6. 
* gnu/packages/python.scm (python-mako): Update to 1.0.6.
 2017-01-02 08:37:25 +01:00
Tobias Geerinckx-Rice
af27e845e1
gnu: awscli: Update to 1.11.35. 
* gnu/packages/python.scm (awscli): Update to 1.11.35.
 2017-01-02 08:37:24 +01:00
Tobias Geerinckx-Rice
bbb99d6b37
gnu: python-werkzeug: Update to 0.11.15. 
* gnu/packages/python.scm (python-werkzeug): Update to 0.11.15.
 2017-01-02 08:37:23 +01:00
Tobias Geerinckx-Rice
27f9148e1d
gnu: python-backports-abc: Update to 0.5. 
* gnu/packages/python.scm (python-backports-abc): Update to 0.5.
 2017-01-02 08:37:23 +01:00
Tobias Geerinckx-Rice
d79fa7da1b
gnu: python-decorator: Update to 4.0.10. 
* gnu/packages/python.scm (python-decorator): Update to 4.0.10.
 2017-01-02 08:37:22 +01:00
Tobias Geerinckx-Rice
819939cb94
gnu: python-pycparser: Use ‘modify-phases’ syntax. 
* gnu/packages/python.scm (python-pycparser)[arguments]: Use
‘modify-phases’.
 2017-01-02 08:37:21 +01:00
Tobias Geerinckx-Rice
5043b20dcd
gnu: python-pycparser: Update to 2.17. 
* gnu/packages/python.scm (python-pycparser): Update to 2.17.
 2017-01-02 08:28:28 +01:00
Leo Famulari
0d48ff811f
gnu: beets: Build with Python 3. 
* gnu/packages/music.scm (beets)[arguments]: Build with python@3.
(native-inputs): Use Python-2 variants of all inputs.
(inputs): Use Python-2 variants of all inputs. Remove python-pyechonest.
 2017-01-01 21:06:32 -05:00
Leo Famulari
27ccefc3d2
gnu: beets: Update to 1.4.2. 
* gnu/packages/music.scm (beets): Update to 1.4.2.
 2017-01-01 21:06:24 -05:00
Leo Famulari
2e161eafd8
gnu: python-pyicu: Update to 1.9.5. 
* gnu/packages/python.scm (python-pyicu, python2-pyicu): Update to 1.9.5.
[source]: Use pypi-uri.
 2017-01-01 20:15:06 -05:00
Theodoros Foradis
9a93f57473
gnu: yosys: Update to 0.7. 
* gnu/packages/fpga.scm (yosys): Update to 0.7.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2017-01-01 20:06:43 -05:00
Theodoros Foradis
f90f6b683e
gnu: yosys: Add xdot functionality. 
* gnu/packages/fpga.scm (yosys)[inputs]: Add xdot, graphviz and psmisc.
[arguments]: Add 'fix-paths' phase.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2017-01-01 20:06:43 -05:00
Theodoros Foradis
abdd28e8c1
gnu: Add xdot. 
* gnu/packages/graphviz.scm (xdot): New variable.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2017-01-01 20:06:43 -05:00
Leo Famulari
7be13d0006
gnu: python-ndg-httpsclient: Use pypi-uri. 
* gnu/packages/python.scm (python-ndg-httpsclient, python2-ndg-httpsclient)
[source]: Use pypi-uri.
 2017-01-01 17:01:32 -05:00
Ricardo Wurmus
5dbeccf5b4
gnu: diffoscope: Embed tool references. 
Fixes <http://bugs.gnu.org/25315>.

* gnu/packages/package-management.scm (diffoscope)[inputs]: Add
colordiff and vim.
[arguments]: Add "embed-tool-references" build phase to embed references
to "colordiff", "xxd", and "readelf".
 2017-01-01 21:53:50 +01:00
Alex Vong
ed88dd4512
gnu: mariadb: Update to 10.1.20. 
* gnu/packages/databases.scm (mariadb): Update to 10.1.20.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2017-01-01 14:51:04 -05:00
Alex Vong
e63b19f509
gnu: mysql: Update to 5.7.17. 
* gnu/packages/databases.scm (mysql): Update to 5.7.17.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2017-01-01 14:45:23 -05:00
Ricardo Wurmus
395bbfdbea
gnu: Add propeller-development-suite. 
* gnu/packages/embedded.scm (propeller-development-suite): New variable.
 2017-01-01 13:56:28 +01:00
Ricardo Wurmus
3ebc86d9bd
gnu: Add spinsim. 
* gnu/packages/embedded.scm (spinsim): New variable.
 2017-01-01 13:56:28 +01:00
Ricardo Wurmus
0a7860c438
gnu: Add spin2cpp. 
* gnu/packages/embedded.scm (spin2cpp): New variable.
 2017-01-01 13:56:28 +01:00
Ricardo Wurmus
c6b96af794
gnu: Add propeller-load. 
* gnu/packages/embedded.scm (propeller-load): New variable.
 2017-01-01 13:56:28 +01:00
Ricardo Wurmus
150e0a1ec6
gnu: Add openspin. 
* gnu/packages/embedded.scm (openspin): New variable.
 2017-01-01 13:56:27 +01:00
Ricardo Wurmus
eb88fbafcd
gnu: Add propeller-toolchain. 
* gnu/packages/embedded.scm (propeller-toolchain): New variable.
 2017-01-01 13:56:27 +01:00
Ricardo Wurmus
0d0079b2c5
gnu: Add proplib. 
* gnu/packages/embedded.scm (proplib): New variable.
 2017-01-01 13:56:27 +01:00
Ricardo Wurmus
68cb27840e
gnu: Add propeller-gcc. 
* gnu/packages/embedded.scm (propeller-gcc): New variable.
 2017-01-01 13:56:27 +01:00
Ricardo Wurmus
2d7c92134e
gnu: Add propeller-binutils. 
* gnu/packages/embedded.scm (propeller-binutils): New variable.
 2017-01-01 13:56:27 +01:00
Ricardo Wurmus
6f5b1c9107
gnu: Add dummy linker for propeller-elf. 
* gnu/packages/bootstrap.scm (glibc-dynamic-linker): Add case for
propeller-elf.
 2017-01-01 13:56:27 +01:00
Ricardo Wurmus
c26ba570cc
gnu: clisp: Remove timestamps. 
* gnu/packages/lisp.scm (clisp)[arguments]: Add "remove-timestamps"
phase to remove "__DATE__" and "__TIME__".
 2017-01-01 13:55:50 +01:00
Ricardo Wurmus
636c77d066
gnu: clisp: Use modify-phases syntax. 
* gnu/packages/lisp.scm (clisp)[arguments]: Use modify-phases syntax.
 2017-01-01 13:55:50 +01:00
Alex Kost
c50dc711a1
gnu: manaplus: Update to 1.6.12.24. 
* gnu/packages/games.scm (manaplus): Update to 1.6.12.24.
 2017-01-01 11:47:08 +03:00
Ben Woodcroft
25d84d3122
gnu: python-dendropy: Update to 4.2.0. 
* gnu/packages/bioinformatics.scm (python-dendropy): Update to 4.2.0.
[source]: Remove patch.
(python2-dendropy)[source]: Use the same source as python-dendropy.
* gnu/packages/patches/python-dendropy-exclude-failing-tests.patch: Remove
file.
* gnu/local.mk (dist_patch_DATA): Remove it.
 2017-01-01 16:47:47 +10:00
Ben Woodcroft
322a583fcf
gnu: diamond: Update to 0.8.31. 
* gnu/packages/bioinformatics.scm (diamond): Update to 0.8.31.
 2017-01-01 16:47:47 +10:00
Ludovic Courtès
7fc2d377d1
gnu: nagios: Update to 4.2.4 [fixes CVE-2016-{9565,9566}]. 
* gnu/packages/monitoring.scm (nagios): Update to 4.2.4.
[native-inputs]: New field.
 2016-12-31 20:02:59 +01:00
Tobias Geerinckx-Rice
b13a5b4d16
gnu: python-graphql-relay: Update to 0.4.5. 
* gnu/packages/python.scm (python-graphql-relay): Update to 0.4.5.
 2016-12-31 16:51:56 +01:00
Tobias Geerinckx-Rice
0c315fb394
gnu: python-freezegun: Update to 0.3.8. 
* gnu/packages/python.scm (python-freezegun): Update to 0.3.8.
 2016-12-31 16:51:56 +01:00
Tobias Geerinckx-Rice
234ade2d7b
gnu: python-ply: Update to 3.9. 
* gnu/packages/python.scm (python-ply): Update to 3.9.
[source]: Use pypi-uri.
 2016-12-31 16:51:55 +01:00
Tobias Geerinckx-Rice
ab0c342924
gnu: python-pyquery: Update to 1.2.17. 
* gnu/packages/python.scm (python-pyquery): Update to 1.2.17.
 2016-12-31 16:51:55 +01:00
Tobias Geerinckx-Rice
42734b9a88
gnu: python-click-log: Update to 0.1.8. 
* gnu/packages/python.scm (python-click-log): Update to 0.1.8.
 2016-12-31 16:51:54 +01:00
Tobias Geerinckx-Rice
ae476d01da
gnu: python-ndg-httpsclient: Update to 0.4.2. 
* gnu/packages/python.scm (python-ndg-httpsclient): Update to 0.4.2.
 2016-12-31 16:51:54 +01:00
Tobias Geerinckx-Rice
f165648e1b
gnu: python-ipykernel: Update to 4.5.2. 
* gnu/packages/python.scm (python-ipykernel): Update to 4.5.2.
 2016-12-31 16:51:53 +01:00
Tobias Geerinckx-Rice
45cc957c72
gnu: python-jupyter-core: Update to 4.2.1. 
* gnu/packages/python.scm (python-jupyter-core): Update to 4.2.1.
 2016-12-31 16:51:53 +01:00
Tobias Geerinckx-Rice
594358f5b6
gnu: python2-fastlmm: Update to 0.2.26. 
* gnu/packages/python.scm (python2-fastlmm): Update to 0.2.26.
 2016-12-31 16:51:40 +01:00
Tobias Geerinckx-Rice
a5f92ca04f
gnu: python-pytz: Update to 2016.10. 
* gnu/packages/python.scm (python-pytz): Update to 2016.10.
 2016-12-31 16:36:20 +01:00
Tobias Geerinckx-Rice
bf5e4bc42a
gnu: python-pyyaml: Update to 3.12. 
* gnu/packages/python.scm (python-pyyaml): Update to 3.12.
[source]: Use pypi-uri.
 2016-12-31 15:27:24 +01:00
Tobias Geerinckx-Rice
7d2e758df5
gnu: python-pygments: Update to 2.1.3. 
* gnu/packages/python.scm (python-pygments): Update to 2.1.3.
 2016-12-31 15:27:23 +01:00
Kei Kebreau
c055a37c8c
gnu: tiled: Update to 0.18.0. 
* gnu/packages/game-development.scm (tiled): Update to 0.18.0.
 2016-12-30 21:45:51 -05:00
ng0
da62a4a19e
gnu: mc: Partially fix absolute file paths. 
Partially fixes <http://bugs.gnu.org/25273>.

* gnu/packages/mc.scm (mc)[arguments]: Add new phase 'fix-absolutism.
This substitutes absolute file paths with functional file paths.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2016-12-31 01:44:04 +01:00
Troy Sankey
0f391063d9
gnu: pius: Update to 2.2.2-0.891687c. 
* gnu/packages/gnupg.scm (pius): Update to 2.2.2-0.891687c.
[inputs]: Change GNUPG-2.0 to GNUPG (2.1).

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2016-12-31 01:44:04 +01:00
José Miguel Sánchez García
68415aa4e1
gnu: libtermkey: Update to 0.19. 
* gnu/packages/terminals.scm (libtermkey): Update to 0.19.

Co-authored-by: Leo Famulari <leo@famulari.name>
 2016-12-30 16:15:25 -05:00
Leo Famulari
858b9afeaf
gnu: libpng: Mention CVE-2016-10087. 
* gnu/packages/patches/libpng-fix-null-ptr-dereference.patch: Rename to ...
* gnu/packages/patches/libpng-CVE-2016-10087.patch: ... this.
* gnu/local.mk (dist_patch_DATA): Adjust.
* gnu/packages/image.scm (libpng/fixed)[source]: Use renamed patch.
 2016-12-30 14:33:21 -05:00
Mark H Weaver
4037e5f52b
gnu: linux-libre@4.1: Update to 4.1.37. 
* gnu/packages/linux.scm (linux-libre-4.1): Update to 4.1.37.
 2016-12-30 04:26:11 -05:00
Ben Woodcroft
a29929b32c
gnu: multiqc: Update to 0.9. 
Suggested by Raoul Bonnal <ilpuccio.febo@gmail.com>.

* gnu/packages/bioinformatics.scm (multiqc): Update to 0.9.
[origin]: Add patch.
* gnu/packages/patches/multiqc-fix-git-subprocess-error.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
 2016-12-30 17:22:43 +10:00
Chris Marusich
95d7d0c57f
gnu: elogind: Enable ACL support. 
* gnu/packages/freedesktop.scm (elogind) [inputs]: Add acl.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2016-12-29 23:42:23 +01:00
Leo Famulari
87b5209558
gnu: mpd: Install systemd service files. 
* gnu/packages/mpd.scm (mpd)[arguments]: Add 'install-service-files' phase.
 2016-12-29 17:28:34 -05:00
Ricardo Wurmus
76b64381cb
gnu: r-genomicfeatures: Update to 1.26.2. 
* gnu/packages/bioinformatics.scm (r-genomicfeatures): Update to 1.26.2.
 2016-12-29 22:24:12 +01:00
Ricardo Wurmus
2f642e5229
gnu: r-biostrings: Update to 2.42.1. 
* gnu/packages/bioinformatics.scm (r-biostrings): Update to 2.42.1.
 2016-12-29 22:24:11 +01:00
Ricardo Wurmus
72c2693b9e
gnu: r-limma: Update to 3.30.7. 
* gnu/packages/bioinformatics.scm (r-limma): Update to 3.30.7.
 2016-12-29 22:24:11 +01:00
Ricardo Wurmus
5796af9981
gnu: r-variantannotation: Update to 1.20.2. 
* gnu/packages/bioinformatics.scm (r-variantannotation): Update to 1.20.2.
 2016-12-29 22:24:11 +01:00
Ricardo Wurmus
5d3acc0b36
gnu: r-edger: Update to 3.16.5. 
* gnu/packages/bioinformatics.scm (r-edger): Update to 3.16.5.
 2016-12-29 22:24:11 +01:00
Ricardo Wurmus
81a17b61e7
gnu: r-genomeinfodb: Update to 1.10.1. 
* gnu/packages/bioinformatics.scm (r-genomeinfodb): Update to 1.10.1.
 2016-12-29 22:24:11 +01:00
Ricardo Wurmus
54d9b568fc
gnu: r-iranges: Update to 2.8.1. 
* gnu/packages/bioinformatics.scm (r-iranges): Update to 2.8.1.
 2016-12-29 22:24:11 +01:00
Ricardo Wurmus
86fc9c4a2c
gnu: r-s4vectors: Update to 0.12.1. 
* gnu/packages/bioinformatics.scm (r-s4vectors): Update to 0.12.1.
 2016-12-29 22:24:11 +01:00
Ricardo Wurmus
c8ad8b6976
gnu: r-biocstyle: Update to 2.2.1. 
* gnu/packages/bioinformatics.scm (r-biocstyle): Update to 2.2.1.
 2016-12-29 22:24:10 +01:00
Ricardo Wurmus
007ee80277
gnu: r-deseq2: Update to 1.14.1. 
* gnu/packages/bioinformatics.scm (r-deseq2): Update to 1.14.1.
 2016-12-29 22:24:10 +01:00
Ricardo Wurmus
d0f0579e6f
gnu: r-annotate: Update to 1.52.1. 
* gnu/packages/bioinformatics.scm (r-annotate): Update to 1.52.1.
[propagated-inputs]: Add r-rcurl.
 2016-12-29 22:24:10 +01:00
Leo Famulari
a57495e27a
gnu: khard: Update to 0.11.3. 
* gnu/packages/mail.scm (khard): Update to 0.11.3.
[arguments]: Build with python instead of python-2. Remove
'disable-egg-compression' phase.
[propagated-inputs]: Don't use python-2 variants of propagated-inputs.
 2016-12-29 16:12:13 -05:00
Ricardo Wurmus
35bb2ff88a
gnu: r-rsqlite: Update to 1.1-1. 
* gnu/packages/statistics.scm (r-rsqlite): Update to 1.1-1.
[propagated-inputs]: Add r-bh, r-memoise, r-plogr, and r-rcpp.
 2016-12-29 21:49:13 +01:00
Ricardo Wurmus
28c041afe8
gnu: Add r-plogr. 
* gnu/packages/statistics.scm (r-plogr): New variable.
 2016-12-29 21:49:13 +01:00
Ricardo Wurmus
ab607061cd
gnu: r-hmisc: Update to 4.0-1. 
* gnu/packages/statistics.scm (r-hmisc): Update to 4.0-1.
[propagated-inputs]: Remove r-cluster, r-foreign, r-lattice, r-nnet, and
r-rpart; add r-base64.
 2016-12-29 21:49:12 +01:00
Ricardo Wurmus
0811f0f9d2
gnu: Add r-base64. 
* gnu/packages/statistics.scm (r-base64): New variable.
 2016-12-29 21:49:12 +01:00
Ricardo Wurmus
ca380feb37
gnu: r-rmarkdown: Update to 1.3. 
* gnu/packages/statistics.scm (r-rmarkdown): Update to 1.3.
[propagated-inputs]: Remove r-tibble; add r-rprojroot.
 2016-12-29 21:49:12 +01:00
Ricardo Wurmus
046e27e3f5
gnu: Add r-rprojroot. 
* gnu/packages/statistics.scm (r-rprojroot): New variable.
 2016-12-29 21:49:12 +01:00
Ricardo Wurmus
a8e45b3240
gnu: r-rcpparmadillo: Update to 0.7.600.1.0. 
* gnu/packages/statistics.scm (r-rcpparmadillo): Update to 0.7.600.1.0.
* gnu/packages/maths.scm (armadillo-for-rcpparmadillo): Update to
7.600.1.
 2016-12-29 21:49:12 +01:00
Ricardo Wurmus
b1c1f4d012
gnu: armadillo: Update to 7.600.2. 
* gnu/packages/maths.scm (armadillo): Update to 7.600.2.
 2016-12-29 21:49:12 +01:00
Ricardo Wurmus
c729d3dc0e
gnu: r-zoo: Update to 1.7-14. 
* gnu/packages/statistics.scm (r-zoo): Update to 1.7-14.
[propagated-inputs]: Remove r-lattice.
 2016-12-29 21:49:11 +01:00
Ricardo Wurmus
53941eb7a5
gnu: r-fastcluster: Update to 1.1.22. 
* gnu/packages/statistics.scm (r-fastcluster): Update to 1.1.22.
 2016-12-29 21:49:11 +01:00
Ricardo Wurmus
3a181dc46e
gnu: r-plotly: Update to 4.5.6. 
* gnu/packages/statistics.scm (r-plotly): Update to 4.5.6.
 2016-12-29 21:49:11 +01:00
Ricardo Wurmus
54aa6eb6ee
gnu: r-r-rsp: Update to 0.40.0. 
* gnu/packages/statistics.scm (r-r-rsp): Update to 0.40.0.
 2016-12-29 21:49:11 +01:00
Ricardo Wurmus
1a44753b95
gnu: r-r-utils: Update to 2.5.0. 
* gnu/packages/statistics.scm (r-r-utils): Update to 2.5.0.
 2016-12-29 21:49:11 +01:00
Ricardo Wurmus
62350c0797
gnu: r-coda: Update to 0.19-1. 
* gnu/packages/statistics.scm (r-coda): Update to 0.19-1.
[propagated-inputs]: Remove r-lattice.
 2016-12-29 21:49:11 +01:00
Ricardo Wurmus
3607afbe4c
gnu: r-chron: Update to 2.3-48. 
* gnu/packages/statistics.scm (r-chron): Update to 2.3-48.
 2016-12-29 21:49:11 +01:00
Ricardo Wurmus
eaec5506ad
gnu: r-knitr: Update to 1.15.1. 
* gnu/packages/statistics.scm (r-knitr): Update to 1.15.1.
[propagated-inputs]: Remove r-formatr.
 2016-12-29 21:49:10 +01:00
Ricardo Wurmus
fd7810d323
gnu: r-bh: Update to 1.62.0-1. 
* gnu/packages/statistics.scm (r-bh): Update to 1.62.0-1.
 2016-12-29 21:49:10 +01:00
Ricardo Wurmus
dd4ae2950a
gnu: r-svglite: Update to 1.2.0. 
* gnu/packages/statistics.scm (r-svglite): Update to 1.2.0.
 2016-12-29 21:49:10 +01:00
Ricardo Wurmus
48a87bbe3b
gnu: r-gdtools: Update to 0.1.3. 
* gnu/packages/statistics.scm (r-gdtools): Update to 0.1.3.
 2016-12-29 21:49:10 +01:00
Ricardo Wurmus
ab01f1cdb1
gnu: r-ggplot2: Update to 2.2.0. 
* gnu/packages/statistics.scm (r-ggplot2): Update to 2.2.0.
[propagated-inputs]: Remove r-proto and r-svglite; add r-lazyeval and
r-tibble.
 2016-12-29 21:49:10 +01:00
Ricardo Wurmus
b94b03b7fa
gnu: r-scales: Update to 0.4.1. 
* gnu/packages/statistics.scm (r-scales): Update to 0.4.1.
 2016-12-29 21:49:10 +01:00
Ricardo Wurmus
8a8fc31c6a
gnu: r-mgcv: Update to 1.8-16. 
* gnu/packages/statistics.scm (r-mgcv): Update to 1.8-16.
 2016-12-29 21:49:10 +01:00
Ricardo Wurmus
421f7772b4
gnu: r-qtl: Update to 1.40-8. 
* gnu/packages/bioinformatics.scm (r-qtl): Update to 1.40-8.
 2016-12-29 21:49:09 +01:00
Ricardo Wurmus
2a1c1b8074
gnu: r-hms: Update to 0.3. 
* gnu/packages/statistics.scm (r-hms): Update to 0.3.
 2016-12-29 21:49:09 +01:00
Ricardo Wurmus
85455a08f4
gnu: r-git2r: Update to 0.17.0. 
* gnu/packages/statistics.scm (r-git2r): Update to 0.17.0.
 2016-12-29 21:49:09 +01:00
Ricardo Wurmus
abb6f0540e
gnu: r-ade4: Update to 1.7-5 
* gnu/packages/statistics.scm (r-ade4): Update to 1.7-5.
 2016-12-29 21:49:09 +01:00
Ricardo Wurmus
db1b38af4e
gnu: r-xml: Update to 3.98-1.5. 
* gnu/packages/statistics.scm (r-xml): Update to 3.98-1.5.
[propagated-inputs]: Remove r-rcurl.
 2016-12-29 21:49:09 +01:00
Ricardo Wurmus
773a50114c
gnu: r-sparsem: Update to 1.74. 
* gnu/packages/statistics.scm (r-sparsem): Update to 1.74.
 2016-12-29 21:49:09 +01:00
Ricardo Wurmus
76ce7c3767
gnu: r-data-table: Update to 1.10.0. 
* gnu/packages/statistics.scm (r-data-table): Update to 1.10.0.
[propagated-inputs]: Remove r-chron.
 2016-12-29 21:49:09 +01:00
Ricardo Wurmus
58b93ad5d9
gnu: r-estimability: Update to 1.2. 
* gnu/packages/statistics.scm (r-estimability): Update to 1.2.
 2016-12-29 21:49:08 +01:00
Ricardo Wurmus
eebac90aa8
gnu: r-rcpp: Update to 0.12.8. 
* gnu/packages/statistics.scm (r-rcpp): Update to 0.12.8.
 2016-12-29 21:49:08 +01:00
Ricardo Wurmus
9cdf10f1c9
gnu: r-yaml: Update to 2.1.14. 
* gnu/packages/statistics.scm (r-yaml): Update to 2.1.14.
 2016-12-29 21:49:08 +01:00
Ricardo Wurmus
c616810720
gnu: r-htmlwidgets: Update to 0.8. 
* gnu/packages/web.scm (r-htmlwidgets): Update to 0.8.
 2016-12-29 21:49:08 +01:00
Ricardo Wurmus
f4ca28d911
gnu: r-curl: Update to 2.3. 
* gnu/packages/web.scm (r-curl): Update to 2.3.
 2016-12-29 21:49:08 +01:00
Ricardo Wurmus
d3122150ca
gnu: r-servr: Update to 0.5. 
* gnu/packages/web.scm (r-servr): Update to 0.5.
 2016-12-29 21:49:08 +01:00
Alex Kost
deb6276dda
Remove Emacs interface. 
* emacs/guix-about.el: Remove file.
* emacs/guix-backend.el: Likewise.
* emacs/guix-base.el: Likewise.
* emacs/guix-buffer.el: Likewise.
* emacs/guix-build-log.el: Likewise.
* emacs/guix-command.el: Likewise.
* emacs/guix-config.el.in: Likewise.
* emacs/guix-devel.el: Likewise.
* emacs/guix-entry.el: Likewise.
* emacs/guix-external.el: Likewise.
* emacs/guix-geiser.el: Likewise.
* emacs/guix-guile.el: Likewise.
* emacs/guix-help-vars.el: Likewise.
* emacs/guix-helper.scm.in: Likewise.
* emacs/guix-history.el: Likewise.
* emacs/guix-hydra-build.el: Likewise.
* emacs/guix-hydra-jobset.el: Likewise.
* emacs/guix-hydra.el: Likewise.
* emacs/guix-info.el: Likewise.
* emacs/guix-init.el: Likewise.
* emacs/guix-license.el: Likewise.
* emacs/guix-list.el: Likewise.
* emacs/guix-location.el: Likewise.
* emacs/guix-main.scm: Likewise.
* emacs/guix-messages.el: Likewise.
* emacs/guix-pcomplete.el: Likewise.
* emacs/guix-popup.el: Likewise.
* emacs/guix-prettify.el: Likewise.
* emacs/guix-profiles.el: Likewise.
* emacs/guix-read.el: Likewise.
* emacs/guix-ui-generation.el: Likewise.
* emacs/guix-ui-license.el: Likewise.
* emacs/guix-ui-location.el: Likewise.
* emacs/guix-ui-package.el: Likewise.
* emacs/guix-ui-system-generation.el: Likewise.
* emacs/guix-ui.el: Likewise.
* emacs/guix-utils.el: Likewise.
* emacs/local.mk: Likewise.
* doc/emacs.texi: Likewise.
* doc/guix.texi: Remove cross-references to Emacs nodes.
(Package Management): Mention 'emacs-guix' package.
* doc/contributing.texi (The Perfect Setup): Remove the reference.
* doc/htmlxref.cnf: Add 'emacs-guix' URL.
* Makefile.am: Remove Emacs stuff.
* configure.ac: Likewise.
* gnu/packages/package-management.scm (guix-0.12.0)[native-inputs]:
Remove "emacs".
[propagated-inputs]: Remove "geiser" and "emacs-magit-popup".

Co-authored-by: Ludovic Courtès <ludo@gnu.org>
 2016-12-29 23:40:24 +03:00
Ricardo Wurmus
94a6f20baf
gnu: r-colorspace: Update to 1.3-2. 
* gnu/packages/statistics.scm (r-colorspace): Update to 1.3-2.
 2016-12-29 20:10:07 +01:00
Raoul Jean Pierre Bonnal
2fd261a37a
gnu: Add r-statmod. 
* gnu/packages/statistics.scm (r-statmod): New variable.
 2016-12-29 19:54:59 +01:00
Raoul Jean Pierre Bonnal
294304169a
gnu: Add r-ggbeeswarm. 
* gnu/packages/statistics.scm (r-ggbeeswarm): New variable.
 2016-12-29 19:54:59 +01:00
Raoul Jean Pierre Bonnal
649d0c4841
gnu: Add r-sourcetools. 
* gnu/packages/statistics.scm (r-sourcetools): New variable.
 2016-12-29 19:54:59 +01:00
Raoul Jean Pierre Bonnal
6ba279853c
gnu: Add r-beeswarm. 
* gnu/packages/statistics.scm (r-beeswarm): New variable.
 2016-12-29 19:54:59 +01:00
Raoul Jean Pierre Bonnal
069581351b
gnu: Add r-vipor. 
* gnu/packages/statistics.scm (r-vipor): New variable.
 2016-12-29 19:54:58 +01:00
Leo Famulari
fc604eda3d
gnu: libpng-1.2: Update to 1.2.57 [security update]. 
* gnu/packages/image.scm (libpng-1.2): Update to 1.2.57.
[replacement]: New field.
 2016-12-29 13:41:43 -05:00
Leo Famulari
322e724bfa
gnu: libpng: Fix a null pointer dereference [fixes security issue]. 
* gnu/packages/patches/libpng-fix-null-ptr-dereference.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/image.scm (libpng)[replacement]: New field.
(libpng/fixed): New variable.
 2016-12-29 13:36:00 -05:00
Leo Famulari
d835c6cc4b
gnu: mpd: Update to 0.19.21. 
* gnu/packages/mpd.scm (mpd): Update to 0.19.21.
 2016-12-29 11:30:31 -05:00
ng0
b954256337
gnu: rustc: Update to 1.14.0. 
* gnu/packages/rust.scm (rustc): Update to 1.14.0.
  %rust-bootstrap-binaries: Update to 1.13.0.

Signed-off-by: David Craven <david@craven.ch>
 2016-12-29 12:38:23 +01:00
Ricardo Wurmus
e62e975b1f
gnu: mu: Avoid bootstrapping. 
* gnu/packages/mail.scm (mu)[arguments]: Rename "patch-configure.ac" to
"patch-configure" and only patch "configure" script; remove "autoreconf"
phase.
[native-inputs]: Remove "autoconf", "automake", "libtool", and
"texinfo".
 2016-12-29 09:20:08 +01:00
Ricardo Wurmus
e7b9da2411
gnu: mu: Update to 0.9.18. 
* gnu/packages/mail.scm (mu): Update to 0.9.18.
 2016-12-29 08:58:57 +01:00
Tobias Geerinckx-Rice
43c0b9beaf
gnu: perl-zip: Update to 1.59. 
* gnu/packages/zip.scm (perl-zip): Update to 1.59.
 2016-12-29 05:37:01 +01:00
ng0
d5bbf806f3
gnu: Add python-trollius-redis. 
* gnu/packages/python.scm (python-trollius-redis, python2-trollius-redis): New
variables.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2016-12-28 22:41:53 -05:00
ng0
789de5e279
gnu: Add python-straight-plugin. 
* gnu/packages/python.scm (python-straight-plugin, python2-straight-plugins):
New variables.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2016-12-28 22:41:53 -05:00
ng0
a0e41de4ab
gnu: Add python-openid-teams. 
* gnu/packages/python.scm (python-openid-teams, python2-openid-teams): New
variables.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2016-12-28 22:41:53 -05:00