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Author SHA1 Message Date
Ricardo Wurmus
4eea449aaa
gnu: r-edger: Update to 3.26.4. 
* gnu/packages/bioinformatics.scm (r-edger): Update to 3.26.4.
 2019-05-29 00:02:17 +02:00
Ricardo Wurmus
4929a30f69
gnu: r-variantannotation: Update to 1.30.1. 
* gnu/packages/bioinformatics.scm (r-variantannotation): Update to 1.30.1.
 2019-05-29 00:02:10 +02:00
Ricardo Wurmus
e4519ee73d
gnu: r-atacseqqc: Update to 1.8.1. 
* gnu/packages/bioconductor.scm (r-atacseqqc): Update to 1.8.1.
 2019-05-28 23:56:36 +02:00
Ricardo Wurmus
13b49976b7
gnu: r-icobra: Update to 1.12.1. 
* gnu/packages/bioconductor.scm (r-icobra): Update to 1.12.1.
 2019-05-28 23:56:31 +02:00
Ricardo Wurmus
85d0bd5340
gnu: r-chippeakanno: Update to 3.18.1. 
* gnu/packages/bioconductor.scm (r-chippeakanno): Update to 3.18.1.
 2019-05-28 23:56:27 +02:00
Ricardo Wurmus
f43ec9e96a
gnu: r-geosphere: Update to 1.5-10. 
* gnu/packages/cran.scm (r-geosphere): Update to 1.5-10.
 2019-05-28 23:56:15 +02:00
Ricardo Wurmus
0fe52daa59
gnu: r-ggfortify: Update to 0.4.7. 
* gnu/packages/cran.scm (r-ggfortify): Update to 0.4.7.
 2019-05-28 23:56:08 +02:00
Ricardo Wurmus
7a8577717f
gnu: r-wgcna: Update to 1.68. 
* gnu/packages/cran.scm (r-wgcna): Update to 1.68.
 2019-05-28 23:56:04 +02:00
Ricardo Wurmus
650e8defa0
gnu: r-bookdown: Update to 0.11. 
* gnu/packages/cran.scm (r-bookdown): Update to 0.11.
[propagated-inputs]: Add ghc-pandoc; remove r-yaml.
 2019-05-28 23:55:44 +02:00
Ricardo Wurmus
20656a0202
gnu: r-upsetr: Update to 1.4.0. 
* gnu/packages/cran.scm (r-upsetr): Update to 1.4.0.
 2019-05-28 23:55:38 +02:00
Ricardo Wurmus
41059f63df
gnu: r-epi: Update to 2.37. 
* gnu/packages/cran.scm (r-epi): Update to 2.37.
 2019-05-28 23:55:33 +02:00
Ricardo Wurmus
9a749cad19
gnu: r-etm: Update to 1.0.5. 
* gnu/packages/cran.scm (r-etm): Update to 1.0.5.
 2019-05-28 23:55:27 +02:00
Ricardo Wurmus
10dbc3fc54
gnu: r-cmprsk: Update to 2.2-8. 
* gnu/packages/cran.scm (r-cmprsk): Update to 2.2-8.
 2019-05-28 23:55:21 +02:00
Ricardo Wurmus
fa10f0d330
gnu: r-ks: Update to 1.11.5. 
* gnu/packages/cran.scm (r-ks): Update to 1.11.5.
 2019-05-28 23:55:14 +02:00
Ricardo Wurmus
1d7bde781f
gnu: r-bayesplot: Update to 1.7.0. 
* gnu/packages/cran.scm (r-bayesplot): Update to 1.7.0.
[propagated-inputs]: Add r-glue, r-tibble, and r-tidyselect.
 2019-05-28 23:54:53 +02:00
Ricardo Wurmus
27abdb11ae
gnu: r-refgenome: Update to 1.7.7. 
* gnu/packages/cran.scm (r-refgenome): Update to 1.7.7.
 2019-05-28 23:54:46 +02:00
Ricardo Wurmus
794c9e7d96
gnu: r-snakecase: Update to 0.11.0. 
* gnu/packages/cran.scm (r-snakecase): Update to 0.11.0.
 2019-05-28 23:54:40 +02:00
Ricardo Wurmus
9dd351233b
gnu: r-openxlsx: Update to 4.1.0.1. 
* gnu/packages/cran.scm (r-openxlsx): Update to 4.1.0.1.
 2019-05-28 23:54:36 +02:00
Ricardo Wurmus
d328379d62
gnu: r-pillar: Update to 1.4.1. 
* gnu/packages/cran.scm (r-pillar): Update to 1.4.1.
 2019-05-28 23:54:32 +02:00
Ricardo Wurmus
130314d8fa
gnu: r-tsp: Update to 1.1-7. 
* gnu/packages/cran.scm (r-tsp): Update to 1.1-7.
 2019-05-28 23:54:26 +02:00
Ricardo Wurmus
6d3cfb88ea
gnu: r-jomo: Update to 2.6-8. 
* gnu/packages/cran.scm (r-jomo): Update to 2.6-8.
 2019-05-28 23:54:18 +02:00
Ricardo Wurmus
beb82eb9d0
gnu: r-ksamples: Update to 1.2-9. 
* gnu/packages/cran.scm (r-ksamples): Update to 1.2-9.
 2019-05-28 23:54:12 +02:00
Ricardo Wurmus
6edf0fb3db
gnu: r-lpsolve: Update to 5.6.13.1. 
* gnu/packages/cran.scm (r-lpsolve): Update to 5.6.13.1.
 2019-05-28 23:54:07 +02:00
Ricardo Wurmus
14532452b8
gnu: r-car: Update to 3.0-3. 
* gnu/packages/statistics.scm (r-car): Update to 3.0-3.
 2019-05-28 23:54:00 +02:00
Ricardo Wurmus
341643c6e1
gnu: r-fpc: Update to 2.2-1. 
* gnu/packages/statistics.scm (r-fpc): Update to 2.2-1.
[propagated-inputs]: Remove r-trimcluster.
 2019-05-28 23:53:43 +02:00
Ricardo Wurmus
f95690ceae
gnu: r-prabclus: Update to 2.2-7.1. 
* gnu/packages/statistics.scm (r-prabclus): Update to 2.2-7.1.
 2019-05-28 23:53:33 +02:00
Ricardo Wurmus
1498b5a2a4
gnu: r-zoo: Update to 1.8-6. 
* gnu/packages/statistics.scm (r-zoo): Update to 1.8-6.
 2019-05-28 23:53:28 +02:00
Ricardo Wurmus
3fca3fa1bc
gnu: r-rmarkdown: Update to 1.13. 
* gnu/packages/statistics.scm (r-rmarkdown): Update to 1.13.
[propagated-inputs]: Add r-xfun.
 2019-05-28 23:53:15 +02:00
Ricardo Wurmus
923c6ac139
gnu: r-evaluate: Update to 0.14. 
* gnu/packages/statistics.scm (r-evaluate): Update to 0.14.
 2019-05-28 23:53:02 +02:00
h.nasajpour
67458e209d
gnu: python-attrs: Update to 19.1.0. 
* gnu/packages/python-xyz.scm (python-attrs): Update to 19.1.0.

Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
 2019-05-28 21:48:10 +02:00
h.nasajpour
205eb40e5b
gnu: python-flask: Update to 1.0.3. 
* gnu/packages/python-web.scm (python-flask): Update to 1.0.3.

Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
 2019-05-28 21:18:24 +02:00
Pierre Neidhardt
458e92215f
gnu: d-feet: Fix missing input and update to 0.3.14. 
* gnu/packages/gnome.scm (d-feet): Update to 0.3.14.
[inputs]: Add hicolor-icon-theme since d-feet won't list anything without it.
 2019-05-28 14:53:02 +02:00
Ludovic Courtès
e7f078c337
gnu: guix: Update to 35d1354. 
* gnu/packages/package-management.scm (guix): Update to 35d1354.
 2019-05-28 09:51:12 +02:00
Nicolas Goaziou
70fa77d881
gnu: emacs-relint: Update to 1.8. 
* gnu/packages/emacs-xyz.scm (emacs-relint): Update to 1.8.
 2019-05-27 23:22:34 +02:00
Nicolas Goaziou
d8d896c5b5
gnu: emacs-xr: Update to 1.12. 
* gnu/packages/emacs-xyz.scm (emacs-xr): Update to 1.12.
 2019-05-27 23:22:19 +02:00
Ludovic Courtès
2e5c71b2a2
gnu: guix: Add dependency on lzlib. 
* gnu/packages/package-management.scm (guix)[inputs]: Add LZLIB.
 2019-05-27 22:47:24 +02:00
Ricardo Wurmus
8916034a34
gnu: r-shiny: Fix JavaScript minification. 
Fixes <https://bugs.gnu.org/35923>.

* gnu/packages/cran.scm (r-shiny)[native-inputs]: Add uglify-js.
 2019-05-27 22:09:22 +02:00
Guillaume LE VAILLANT
ed72a133db
gnu: Add osmctools 
* gnu/packages/geo.scm (osmctools): New variable.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2019-05-27 14:32:13 -04:00
Alex Griffin
521d736ae9
gnu: go@1.4: Update to 1.4-bootstrap-20171003. 
* gnu/packages/golang.scm (go-1.4): Use the bootstrap branch that is
still supported upstream.
[version]: Update to 1.4-bootstrap-20171003.
[arguments]: Remove obsolete fix for timezone test which is now included
upstream.  Don't manually disable cgo because it is disabled by default.
Manually enable test suite because future releases will disable tests by
default.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2019-05-27 14:26:46 -04:00
Danny Milosavljevic
8d1647b228
gnu: python-alembic: Update to 1.0.10. 
* gnu/packages/databases.scm (python-alembic): Update to 1.0.10.
 2019-05-27 18:16:25 +02:00
Stefan Stefanović
cf342a8598
gnu: tlp: Add required x86-energy-perf-policy input dependency. 
* gnu/packages/linux.scm (tlp)
[inputs]: Add system specific x86-energy-perf-policy dependency.
[arguments]<#:phases>['wrap]:
Adjust bin-directory procedure to return #f on missing input,
a guard against system specific input dependencies.
Filter only strings in the path list. Reformat for-each block.
Add x86-energy-perf-policy in bin-directory input-name list.

Co-authored-by: Ludovic Courtès <ludo@gnu.org>
 2019-05-27 16:41:12 +02:00
Stefan Stefanović
71bd55cb2a
gnu: Add x86-energy-perf-policy. 
* gnu/packages/linux.scm (x86-energy-perf-policy): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2019-05-27 16:35:09 +02:00
guy fleury iteriteka
66fca5041b
gnu: MATE: Use mirror://mate/ in source URIs. 
* gnu/packages/mate.scm(MATE packages)[source](uri): Use "mirror://mate/"
  instead of "https://pub.mate-desktop.org/releases/" directly.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2019-05-27 12:02:27 +02:00
Alex Vong
45bdb66251
gnu: you-get: Update to 0.4.1302. 
* gnu/packages/video.scm (you-get): Update to 0.4.1302.
 2019-05-27 02:28:26 +08:00
Mark H Weaver
5ea87197f6
gnu: linux-libre: Update to 5.1.5. 
* gnu/packages/linux.scm (%linux-libre-version): Update to 5.1.5.
(%linux-libre-hash): Update hash.
 2019-05-26 14:19:40 -04:00
Mark H Weaver
5b7be798b2
gnu: linux-libre@4.19: Update to 4.19.46. 
* gnu/packages/linux.scm (%linux-libre-4.19-version): Update to 4.19.46.
(%linux-libre-4.19-hash): Update hash.
 2019-05-26 14:19:38 -04:00
Mark H Weaver
d87d375b64
gnu: linux-libre@4.14: Update to 4.14.122. 
* gnu/packages/linux.scm (%linux-libre-4.14-version): Update to 4.14.122.
(%linux-libre-4.14-hash): Update hash.
 2019-05-26 14:19:35 -04:00
Mark H Weaver
5f3f63e5ad
gnu: linux-libre@4.9: Update to 4.9.179. 
* gnu/packages/linux.scm (linux-libre-4.9): Update to 4.9.179.
 2019-05-26 14:19:33 -04:00
Mark H Weaver
2bdce7a654
gnu: linux-libre: Rename a patch. 
* gnu/packages/linux.scm (%linux-libre-arm-export-__sync_icache_dcache-patch):
Remove the version from the file name, since it applies to multiple versions.
 2019-05-26 14:19:04 -04:00
Mark H Weaver
403b3a8c61
gnu: linux-libre-arm-generic: Move definition. 
* gnu/packages/linux.scm (linux-libre-arm-generic): Move the definition down,
next to the other linux-libre-arm-generic-* packages.
 2019-05-26 14:19:00 -04:00
Mark H Weaver
efbbf9a15c
gnu: vhba-module: Remove duplicate definition. 
This is a followup to commit e1f640db8f.

* gnu/packages/linux.scm (vhba-module): Remove duplicate definition.
 2019-05-26 14:18:55 -04:00
Marius Bakke
7024846181
gnu: node: Update to 10.15.3. 
* gnu/packages/libevent.scm (libuv-1.19): Remove variable.
* gnu/packages/node.scm (node): Update to 10.15.3.
[source]: Use XZ-compressed tarball.
[arguments]: Add #:test-target.  Use DELETE-FILE instead of DELETE-IF-EXISTS.
Remove obsolete test deletions.
[inputs]: Change OPENSSL to OPENSSL-NEXT.  Change LIBUV-1.19 to LIBUV.
(node-lts): Remove variable.
 2019-05-26 19:48:39 +02:00
Marius Bakke
0d3dbe3f56
gnu: libevent: Update to 2.1.0. 
* gnu/packages/patches/libevent-2.1-dns-tests.patch,
gnu/packages/patches/libevent-2.1-skip-failing-test.patch: Delete files.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
* gnu/packages/libevent.scm (libevent): Update to 2.1.10.
[source](patches): Remove.
 2019-05-26 19:48:39 +02:00
Alex Vong
304fb7000a
gnu: youtube-dl: Update to 2019.05.20. 
* gnu/packages/video.scm (youtube-dl): Update to 2019.05.20.

Signed-off-by: Alex Vong <alexvong1995@gmail.com>
 2019-05-27 01:34:09 +08:00
Efraim Flashner
51daf2f553
gnu: ioquake: Build on all architectures. 
* gnu/packages/game-development.scm (ioquake)[supported-systems]: Remove
field.
 2019-05-26 20:22:36 +03:00
Ricardo Wurmus
164cb4da63
gnu: pigx-chipseq: Update to 0.0.41. 
* gnu/packages/bioinformatics.scm (pigx-chipseq): Update to 0.0.41.
 2019-05-26 10:56:52 +02:00
Brett Gilio
6d94465b4e
gnu: python-shapely: Update to 1.6.4.post2. 
* gnu/packages/python-xyz.scm (python-shapely): Update to 1.6.4.post2.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
 2019-05-26 10:22:05 +02:00
Brett Gilio
7abf3cbf71
gnu: python-psutil: Update to 5.6.2. 
* gnu/packages/python-xyz.scm (python-psutil): Update to 5.6.2.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
 2019-05-26 10:22:05 +02:00
Dan Frumin
414f545ee6
gnu: coq-equations: Update to 1.2. 
Signed-off-by: Marius Bakke <mbakke@fastmail.com>
 2019-05-26 10:22:05 +02:00
Rutger Helling
9c11ba9282
gnu: mgba: Update to 0.7.2. 
* gnu/packages/emulators.scm (mgba): Update to 0.7.2.
 2019-05-26 10:15:21 +02:00
Rutger Helling
d21c68ac46
gnu: kitty: Update to 0.14.0. 
* gnu/packages/terminals.scm (kitty): Update to 0.14.0.
 2019-05-26 10:15:21 +02:00
Tobias Geerinckx-Rice
ac12a01394
gnu: wine-staging: Update to 4.9. 
* gnu/packages/wine.scm (wine-staging-patchset-data, wine-staging):
Update to 4.9.
 2019-05-26 05:22:51 +02:00
Tobias Geerinckx-Rice
5daafe0b5d
gnu: rxcpp: Don't use unstable tarball. 
* gnu/packages/machine-learning.scm (rxcpp)[source]: Use GIT-FETCH and
GIT-FILE-NAME.
 2019-05-26 05:00:50 +02:00
Tobias Geerinckx-Rice
e91a0bff01
gnu: rxcpp: Update to 4.1.0. 
* gnu/packages/machine-learning.scm (rxcpp): Update to 4.1.0.
 2019-05-26 05:00:50 +02:00
Tobias Geerinckx-Rice
f3addff21c
gnu: libelf: Use archived home page and mirrored source. 
* gnu/packages/elf.scm (libelf)[source]: Use mirror URLs.
[home-page]: Use archived home page.
 2019-05-26 03:27:33 +02:00
Tobias Geerinckx-Rice
dbe2dfa528
gnu: pidgin: Use HTTPS home page. 
* gnu/packages/messaging.scm (pidgin)[home-page]: Use HTTPS.
 2019-05-26 03:27:33 +02:00
Tobias Geerinckx-Rice
569958aeb5
gnu: pidgin: Add network-manager support. 
* gnu/packages/messaging.scm (pidgin)[inputs]: Add network-manager.
[arguments]: Undisable it in #:configure-flags.
 2019-05-26 03:27:33 +02:00
Tobias Geerinckx-Rice
0fcb0e5076
gnu: pidgin: Update to 2.13.0. 
* gnu/packages/messaging.scm (pidgin): Update to 2.13.0.
 2019-05-26 03:27:33 +02:00
Tobias Geerinckx-Rice
a4cf65c804
gnu: pidgin: Don't use NAME in source URI. 
* gnu/packages/messaging.scm (pidgin)[source]: Hard-code NAME.
 2019-05-26 03:27:33 +02:00
Tobias Geerinckx-Rice
8a8597819e
gnu: duplicity: Update to 0.7.19. 
* gnu/packages/backup.scm (duplicity): Update to 0.7.19.
 2019-05-26 03:27:33 +02:00
Kei Kebreau
41cdaf47e1
gnu: squirrel: Fix build. 
This follows commit 9d0c291e3e.

* gnu/packages/squirrel.scm: Adjust module reference.
 2019-05-25 06:08:23 -04:00
Brian Leung
7547648091
gnu: emacs-lispy: Update to 0.27.0. 
* gnu/packages/emacs-xyz.scm (emacs-lispy): Update to 0.27.0.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2019-05-25 11:52:37 +02:00
Brian Leung
c799fd63f6
gnu: emacs-avy: Update to 0.5.0. 
* gnu/packages/emacs-xyz.scm (emacs-avy): Update to 0.5.0.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2019-05-25 11:52:37 +02:00
Brian Leung
eea4ed9869
gnu: emacs-highlight-symbol: Update to 1.3.1-7a789c7. 
* gnu/packages/emacs-xyz.scm (emacs-highlight-symbol): Update to 1.3.1-7a789c7.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2019-05-25 11:52:33 +02:00
Kei Kebreau
8698d986db
gnu: supertux: Update to 0.6.0. 
* gnu/packages/games.scm (supertux): Update to 0.6.0.
[source]: Add patches.
[arguments]: Add -DUSE_SYSTEM_PHYSFS=ON. Add 'patch-squirrel-path' phase.
[inputs]: Add freetype and squirrel.
* gnu/packages/patches/supertux-fix-build-with-gcc5.patch,
gnu/packages/patches/supertux-unbundle-squirrel.patch: New files.
* gnu/local.mk (dist_patch_DATA): Add them.
 2019-05-24 21:00:15 -04:00
Kei Kebreau
608d148c50
gnu: squirrel: Install headers and documentation. 
* gnu/packages/squirrel.scm (squirrel)[arguments]: Disable building static
libraries. Add 'install-documentation' and 'install-headers' phases.
[native-inputs]: Add python-sphinx.
 2019-05-24 21:00:15 -04:00
Kei Kebreau
03b630686f
gnu: squirrel: Build from a source archive instead of a Git checkout. 
* gnu/packages/squirrel.scm (squirrel)[source]: Use url-fetch and adjust the
source URL accordingly.
 2019-05-24 21:00:15 -04:00
Marius Bakke
dbe533292b
gnu: help2man: Update to 1.47.10. 
* gnu/packages/man.scm (help2man/latest): Update to 1.47.10.
 2019-05-24 21:54:32 +02:00
Marius Bakke
ceb1936aa4
gnu: python-markdown: Update to 3.1.1. 
* gnu/packages/python-xyz.scm (python-markdown): Update to 3.1.1.
 2019-05-24 21:54:32 +02:00
Marius Bakke
0cb9bacbfa
gnu: perl: Update home page. 
* gnu/packages/perl.scm (perl)[home-page]: Use HTTPS.
 2019-05-24 21:54:32 +02:00
Marius Bakke
6eceb2d445
gnu: Add python-sphinxcontrib-qthelp. 
* gnu/packages/sphinx.scm (python-sphinxcontrib-qthelp): New public variable.
 2019-05-24 21:54:32 +02:00
Marius Bakke
72f278a0ff
gnu: Add python-sphinxcontrib-htmlhelp. 
* gnu/packages/sphinx.scm (python-sphinxcontrib-htmlhelp): New public variable.
 2019-05-24 21:54:32 +02:00
Marius Bakke
67be8943c3
gnu: Add python-sphinxcontrib-jsmath. 
* gnu/packages/sphinx.scm (python-sphinxcontrib-jsmath): New public variable.
 2019-05-24 21:54:31 +02:00
Marius Bakke
62ad0c8b0f
gnu: Add python-sphinxcontrib-devhelp. 
* gnu/packages/sphinx.scm (python-sphinxcontrib-devhelp): New public variable.
 2019-05-24 21:54:31 +02:00
Marius Bakke
bc2a3f7c62
gnu: Add python-sphinxcontrib-applehelp. 
* gnu/packages/sphinx.scm (python-sphinxcontrib-applehelp): New public variable.
 2019-05-24 21:54:31 +02:00
Marius Bakke
c5c55a9f2c
gnu: Add python-sphinxcontrib-serializinghtml. 
* gnu/packages/sphinx.scm (python-sphinxcontrib-serializinghtml): New public
variable.
 2019-05-24 21:54:31 +02:00
Marius Bakke
9d0c291e3e
gnu: Move Sphinx and friends to (gnu packages sphinx). 
* gnu/packages/python-xyz.scm (python-sphinxcontrib-websupport,
python2-sphinxcontrib-websupport, python-sphinx, python2-sphinx,
python-sphinx-gallery, python2-sphinx-gallery, python-sphinx-rtd-theme,
python2-sphinx-rtd-theme, python-guzzle-sphinx-theme,
python2-guzzle-sphinx-theme, python-sphinxcontrib-newsfeed,
python-sphinxcontrib-programoutput, python2-sphinxcontrib-programoutput,
python-sphinx-repoze-interface, python2-sphinx-repoze-interface,
python-sphinx-cloud-sptheme, python2-sphinx-cloud-sptheme,
python-sphinx-alabaster-theme, python2-sphinx-alabaster-theme,
python-sphinx-me, python-sphinxcontrib-svg2pdfconverter): Move to ...
(gnu):
* gnu/packages/sphinx.scm: ... here.  New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Adjust accordingly.
* gnu/packages/admin.scm, gnu/packages/bioinformatics.scm,
gnu/packages/calendar.scm, gnu/packages/cluster.scm,
gnu/packages/databases.scm, gnu/packages/dav.scm, gnu/packages/disk.scm,
gnu/packages/django.scm, gnu/packages/elf.scm, gnu/packages/emacs-xyz.scm,
gnu/packages/emulators.scm, gnu/packages/finance.scm, gnu/packages/image.scm,
gnu/packages/libffi.scm, gnu/packages/mail.scm, gnu/packages/mpd.scm,
gnu/packages/openstack.scm, gnu/packages/pdf.scm, gnu/packages/python-web.scm,
gnu/packages/search.scm, gnu/packages/statistics.scm,
gnu/packages/storage.scm, gnu/packages/sync.scm, gnu/packages/terminals.scm,
gnu/packages/tls.scm, gnu/packages/web.scm: Adjust module imports.
 2019-05-24 21:54:31 +02:00
Marius Bakke
a52c807a39
gnu: postgresql: Replace with 10.8 [security fixes]. 
This fixes CVE-2019-10129 and CVE-2019-10130.

* gnu/packages/databases.scm (postgresql)[replacement]: New field.
(postgresql-10.8): New variable.
 2019-05-24 21:54:30 +02:00
Dan Frumin
66fbffde1f
gnu: Add coq-stdpp. 
* gnu/packages/coq.scm (coq-stdpp): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2019-05-24 18:24:16 +02:00
Reza Alizadeh Majd
8f5371d083
gnu: lxqt-panel: fix taskbar plugin's application list issue. 
* gnu/packages/lxqt.scm (lxqt-panel): move `kwindowsystem` from `inputs`
to `propagated-inputs`

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2019-05-24 18:24:16 +02:00
Reza Alizadeh Majd
42f3eb2e7f
gnu: lxqt-session: fix lxqt-rc.xml permission issue 
* gnu/packages/lxqt.scm (lxqt-session): add write permission to
lxqt-rc.xml file after initial copy to user directory

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2019-05-24 18:24:16 +02:00
Andy Tai
43675ac77a
gnu: Add libjit. 
* gnu/packages/assembly.scm (libjit): Add at 0.1.4

Co-authored-by: Ludovic Courtès <ludo@gnu.org>
 2019-05-24 18:24:16 +02:00
Ludovic Courtès
fc289fb21b
gnu: guile-next: Update to 2.9.2. 
* gnu/packages/guile.scm (guile-next): Update to 2.9.2.
 2019-05-24 18:24:16 +02:00
Jakob L. Kreuze
fc16bbb7aa
gnu: Add chocolate-doom. 
* gnu/packages/games.scm (chocolate-doom): New variables.
 2019-05-24 10:49:49 -04:00
Rutger Helling
b019965cc5
gnu: gajim-omemo: Update to 2.6.29. 
* gnu/packages/messaging.scm (gajim-omemo): Update to 2.6.29.
 2019-05-24 08:14:44 +02:00
Tobias Geerinckx-Rice
e26d628b0f
gnu: parallel: Update to 20190522. 
* gnu/packages/parallel.scm (parallel): Update to 20190522.
 2019-05-23 22:07:48 +02:00
Efraim Flashner
234999497d
gnu: wgetpaste: Remove dead paste site. 
* gnu/packages/wget.scm (wgetpaste)[arguments]: Add custom phase to
remove newly defunct paste site.
 2019-05-23 20:58:47 +03:00
Pierre Neidhardt
e4ff9dffe7
gnu: Add ioquake3. 
* gnu/packages/game-development.scm (ioquake3): New variable.
 2019-05-23 18:55:21 +02:00
Marius Bakke
cee9b0566d
gnu: strace: Update to 5.1. 
* gnu/packages/linux.scm (strace): Update to 5.1.
 2019-05-23 17:49:06 +02:00
Marius Bakke
3d3c07f3ee
gnu: notmuch: Update to 0.28.4. 
* gnu/packages/mail.scm (notmuch): Update to 0.28.4.
[native-inputs]: Change PYTHON-2 and PYTHON2-DOCUTILS to PYTHON and
PYTHON-DOCUTILS.
 2019-05-23 17:49:06 +02:00
Nicolas Goaziou
f41378b797
gnu: silkaj: Update to 0.7.0. 
* gnu/packages/finance.scm (silkaj): Update to 0.7.0.
[inputs]: Add python-texttable.
 2019-05-23 16:52:55 +02:00
Nicolas Goaziou
3425fbc69f
gnu: flare-game: Update to 1.10. 
* gnu/packages/games.scm (flare-game): Update to 1.10.
 2019-05-23 16:46:45 +02:00
Nicolas Goaziou
729f0ccbb5
gnu: flare-engine: Update to 1.10. 
* gnu/packages/games.scm (flare-engine): Update to 1.10.
 2019-05-23 16:46:32 +02:00
Ricardo Wurmus
a9150d4c23
gnu: salmon: Update to 0.13.1. 
* gnu/packages/bioinformatics.scm (salmon): Update to 0.13.1.
[arguments]: Adjust "do-not-look-for-boost" build phase; adjust
"prepare-rapmap" phase; adjust "use-system-libraries" phase.
[inputs]: Remove bwa, jellyfish, spdlog-for-salmon.
[native-inputs]: Add pkg-config.
(spdlog-for-salmon, bwa-for-salmon): Remove variables.
 2019-05-23 16:32:21 +02:00
Nicolas Goaziou
f918a296e8
gnu: python-duniterpy: Update to 0.54.1. 
* gnu/packages/finance.scm (python-duniterpy): Update to 0.54.1.
 2019-05-23 16:23:03 +02:00
Nicolas Goaziou
6406badb2a
gnu: wireshark: Update to 3.0.2. 
* gnu/packages/networking.scm (wireshark): Update to 3.0.2.
 2019-05-23 16:16:55 +02:00
Nicolas Goaziou
0f3794fb7c
gnu: keepassxc: Update to 2.4.1. 
* gnu/packages/password-utils.scm (keepassxc): Update to 2.4.1.
[arguments]: Disable update checking.
[inputs]: Add qrencode and qtsvg.
 2019-05-23 14:53:36 +02:00
Andy Tai
39d655f8cf
gnu: Add squirrel. 
* gnu/packages/squirrel.scm: New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add it.
 2019-05-22 21:36:45 -04:00
Vagrant Cascadian
dcdafc6e18
gnu: xf86-input-joystick: Fix typo "control". 
* gnu/packages/xorg (xf86-input-joystick)[description]: Fix typo.
 2019-05-22 18:30:05 -07:00
Vagrant Cascadian
c284dffcbe
gnu: renderproto: Fix typo "protocol". 
* gnu/packages/xorg (renderproto)[description]: Fix typo.
 2019-05-22 18:30:03 -07:00
Vagrant Cascadian
168d5634a6
gnu: xautomation: Fix typo "programs". 
* gnu/packages/xdisorg (xautomation)[description]: Fix typo.
 2019-05-22 18:30:00 -07:00
Vagrant Cascadian
4ba51e22c7
gnu: nghttp2: Fix typo "compatibility". 
* gnu/packages/web (nghttp2)[description]: Fix typo.
 2019-05-22 18:29:58 -07:00
Vagrant Cascadian
1bb5085694
gnu: python-internetarchive: Fix typo "programmatic". 
* gnu/packages/web (python-internetarchive)[description]: Fix typo.
 2019-05-22 18:29:55 -07:00
Vagrant Cascadian
e54af3225d
gnu: ruby-markaby: Fix typo "Embedded". 
* gnu/packages/ruby (ruby-markaby)[description]: Fix typo.
 2019-05-22 18:29:52 -07:00
Vagrant Cascadian
50fceab07e
gnu: python-honcho: Fix typo "several". 
* gnu/packages/python-xyz (python-honcho)[description]: Fix typo.
 2019-05-22 18:29:50 -07:00
Vagrant Cascadian
7cc9ef9c20
gnu: perl-text-csv-xs: Fix typo "Routines". 
* gnu/packages/perl (perl-text-csv-xs)[synopsis]: Fix typo.
 2019-05-22 18:29:47 -07:00
Vagrant Cascadian
95480b9b51
gnu: perl-moox-handlesvia: Fix typo "attribute". 
* gnu/packages/perl (perl-moox-handlesvia)[description]: Fix typo.
 2019-05-22 18:29:45 -07:00
Vagrant Cascadian
55f54fb921
gnu: perl-data-uniqid: Fix typo "system". 
* gnu/packages/perl (perl-data-uniqid)[description]: Fix typo.
 2019-05-22 18:29:43 -07:00
Vagrant Cascadian
d6901d933b
gnu: pdfposter: Fix typo "multiple". 
* gnu/packages/pdf (pdfposter)[description]: Fix typo.
 2019-05-22 18:29:40 -07:00
Vagrant Cascadian
37c5b197bb
gnu: ocaml-compiler-libs: Fix typo "package". 
* gnu/packages/ocaml (ocaml-compiler-libs)[description]: Fix typo.
 2019-05-22 18:29:38 -07:00
Vagrant Cascadian
86912a67ac
gnu: ocaml-migrate-parsetree: Fix typo "converter". 
* gnu/packages/ocaml (ocaml-migrate-parsetree)[synopsis]: Fix typo.
 2019-05-22 18:29:36 -07:00
Vagrant Cascadian
57e69c1d2e
gnu: mumps: Fix typo "Gaussian". 
* gnu/packages/maths (mumps)[description]: Fix typo.
 2019-05-22 18:29:33 -07:00
Vagrant Cascadian
245289f8dd
gnu: lxqt-policykit: Fix typo "authentication". 
* gnu/packages/lxqt (lxqt-policykit)[description]: Fix typo.
 2019-05-22 18:29:30 -07:00
Vagrant Cascadian
c42dcaa91e
gnu: ghc-persistent: Fix typo "systems". 
* gnu/packages/haskell (ghc-persistent)[description]: Fix typo.
 2019-05-22 18:22:09 -07:00
Vagrant Cascadian
b5cfc89f2d
gnu: ghc-reflection: Fix typo "propagating". 
* gnu/packages/haskell (ghc-reflection)[description]: Fix typo.
 2019-05-22 18:22:03 -07:00
Vagrant Cascadian
7306eb5cf5
gnu: ghc-aeson-pretty: Fix typo "readability". 
* gnu/packages/haskell-web (ghc-aeson-pretty)[description]: Fix typo.
 2019-05-22 18:22:01 -07:00
Vagrant Cascadian
2ec41781d5
gnu: go-github-com-btcsuite-btcd-btcec: Fix typo "significantly". 
* gnu/packages/golang (go-github-com-btcsuite-btcd-btcec)[description]: Fix
  typo.
 2019-05-22 18:21:58 -07:00
Vagrant Cascadian
a95b643630
gnu: go-github-com-docker-distribution: Correct grammar and spelling. 
* gnu/packages/golang (go-github-com-docker-distribution)[description]:
  Correct grammar and spelling.
  [synopsis]: Correct grammar and spelling.
 2019-05-22 18:21:56 -07:00
Vagrant Cascadian
ae03ce0f2f
gnu: go-github-com-google-cadvisor: Fix typo "performance". 
* gnu/packages/golang (go-github-com-google-cadvisor)[description]: Fix typo.
 2019-05-22 18:21:54 -07:00
Vagrant Cascadian
ce97f33656
gnu: go-golang-org-x-net-context: Fix typo "cancellation". 
* gnu/packages/golang (go-golang-org-x-net-context)[description]: Fix typo.
 2019-05-22 18:21:51 -07:00
Vagrant Cascadian
b55b96a73c
gnu: go-github-com-petermattis-goid: Fix typo "programmatically". 
* gnu/packages/syncthing (go-github-com-petermattis-goid)[description]: Fix
  typo.
 2019-05-22 18:21:49 -07:00
Vagrant Cascadian
4ca7207be2
gnu: python-docopt: Fix typo "programmatically". 
* gnu/packages/python-xyz (python-docopt)[description]: Fix typo.
 2019-05-22 18:21:46 -07:00
Vagrant Cascadian
5c6b576ab8
gnu: go-github-com-tj-docopt: Fix typo "programmatically". 
* gnu/packages/golang (go-github-com-tj-docopt)[description]: Fix typo.
 2019-05-22 18:21:44 -07:00
Vagrant Cascadian
e16b44a20c
gnu: font-tamzen: Fix typo "programmatically". 
* gnu/packages/fonts (font-tamzen)[description]: Fix typo.
 2019-05-22 18:21:42 -07:00
Vagrant Cascadian
add43093ac
gnu: dbus-c++: Fix typo "language". 
* gnu/packages/glib (dbus-c++)[description]: Fix typo.
 2019-05-22 18:21:39 -07:00
Vagrant Cascadian
afe02c1a12
gnu: infiniband-diags: Fix typo "diagnostic". 
* gnu/packages/fabric-management (infiniband-diags)[description]: Fix typo.
 2019-05-22 18:21:35 -07:00
Vagrant Cascadian
a265b400b4
gnu: emacs-noflet: Fix typo "lets you". 
* gnu/packages/emacs-xyz (emacs-noflet)[description]: Fix typo.
 2019-05-22 18:21:33 -07:00
Vagrant Cascadian
b9c0d5446c
gnu: emacs-lsp-mode: Fix typo "implementation". 
* gnu/packages/emacs-xyz (emacs-lsp-mode)[description]: Fix typo.
 2019-05-22 18:21:31 -07:00
Vagrant Cascadian
4dc559ab49
gnu: emacs-groovy-modes: Fix typo "highlighting". 
* gnu/packages/emacs-xyz (emacs-groovy-modes)[description]: Fix typo.
 2019-05-22 18:21:28 -07:00
Vagrant Cascadian
0a71b5dc09
gnu: emacs-evil-surround: Fix typo "parentheses". 
* gnu/packages/emacs-xyz (emacs-evil-surround)
  [synopsis]: Fix typo.
  [description]: Fix typo.
 2019-05-22 18:21:26 -07:00
Vagrant Cascadian
27513c441c
gnu: emacs-lua-mode: Fix typo "programming". 
* gnu/packages/emacs-xyz (emacs-lua-mode)[description]: Fix typo.
 2019-05-22 18:21:23 -07:00
Vagrant Cascadian
7d4e465e33
gnu: emacs-sly: Fix typo "familiar". 
* gnu/packages/emacs-xyz (emacs-sly)[description]: Fix typo.
 2019-05-22 18:21:21 -07:00
Vagrant Cascadian
028dab34db
gnu: emacs-rspec: Fix typo "corresponding". 
* gnu/packages/emacs-xyz (emacs-rspec)[description]: Fix typo.
 2019-05-22 18:21:19 -07:00
Vagrant Cascadian
784c3da11e
gnu: hdf5-parallel-openmpi: Fix typo "explicitly". 
* gnu/packages/maths (hdf5-parallel-openmpi): Fix typo.
 2019-05-22 18:21:16 -07:00
Vagrant Cascadian
6a16b8aa68
gnu: kicad: Fix typo "explicitly". 
* gnu/packages/engineering (kicad): Fix typo in comment.
 2019-05-22 18:21:14 -07:00
Vagrant Cascadian
f457397ad7
gnu: stress-make: Fix typo "explicitly". 
* gnu/packages/debug (stress-make)[description]: Fix typo.
 2019-05-22 18:21:11 -07:00
Vagrant Cascadian
d087a3a6c1
gnu: python-trollius-redis: Fix typo "asynchronous". 
* gnu/packages/databases (python-trollius-redis)[description]: Fix typo.
 2019-05-22 18:09:47 -07:00
Vagrant Cascadian
49369a0130
gnu: r-capushe: Fix typo "penalties". 
* gnu/packages/cran (r-capushe)[description]: Fix typo.
 2019-05-22 18:09:44 -07:00
Vagrant Cascadian
6fa0914a5c
gnu: java-ops4j-pax-tinybundles: Fix typo "convenient". 
* gnu/packages/java (java-ops4j-pax-tinybundles)[description]: Fix typo.
 2019-05-22 18:09:40 -07:00
Vagrant Cascadian
7fef0800b3
gnu: go-github.com-smartystreets-assertions: Fix typo "convenient". 
* gnu/packages/check (go-github.com-smartystreets-assertions)[description]:
  Fix typo.
 2019-05-22 18:09:38 -07:00