Commit graph

143366 commits

Author SHA1 Message Date
Mark H Weaver
88b4bce96a
gnu: icecat: Update to 115.16.0-guix1 [security fixes].
Includes fixes for CVE-2024-9392, CVE-2024-9393, CVE-2024-9394, and
CVE-2024-9401.

* gnu/packages/gnuzilla.scm (%icecat-base-version, %icecat-build-id): Update.
(icecat-source): Update gnuzilla commit, base version, and hashes.
2024-10-01 15:52:39 -04:00
Florian Pelz
71fef00c95
nls: Update translations.
Change-Id: Ib5aa0ca23620dc4f3ac96fd86c727e9a9e8935f5
2024-10-01 17:28:03 +02:00
jgart
e92516d900
gnu: Add lem.
* gnu/packages/text-editors.scm (lem): New variable.
Co-authored-by: Ada Stevenson <adanskana@gmail.com>

Change-Id: I2946355068597e44b8699281647bcd8d98f47911
2024-10-01 10:02:35 -05:00
jgart
6da2deff73
gnu: trealla: Update to 2.56.2.
* gnu/packages/prolog.scm (trealla): Update to 2.56.2.

Change-Id: I6fd1f43d01d9cbe8056900a30678d1f400b45a5c
2024-10-01 08:45:27 -05:00
jgart
3ab1e50639
gnu: cl-jsonrpc: Update to a43dd93.
* gnu/packages/lisp-xyz.scm (cl-jsonrpc): Update to a43dd93.

Change-Id: I18f267384f14e3e69f3a6f359b74c28d04e215a3
2024-10-01 08:43:24 -05:00
jgart
7b3d58d20d
gnu: libasyncprocess Update to 8067007.
* gnu/packages/lisp-xyz.scm (libasyncprocess): Update to 8067007.

Change-Id: I36b02dab977ee79d291a96c93bc19f48d5c9286c
2024-10-01 01:37:40 -05:00
jgart
043bc3b5fe
gnu: cl-str: Update to 0.21.
* gnu/packages/lisp-xyz.scm (cl-str): Update to 0.21.

Change-Id: I9773052519d552122866b103f00d6f3c45eba59c
2024-09-30 23:19:33 -05:00
jgart
836ff74947
gnu: Add cl-base16.
* gnu/packages/lisp-xyz.scm (cl-base16, ecl-cl-base16, sbcl-cl-base16): New
variables.

Change-Id: Ib73ddb3673d0e8cb76c58551f1cfc28edefce58a
2024-09-30 19:25:10 -05:00
Florian Pelz
25ff62e250
nls: Update translations.
Change-Id: Ic1f7216e35c17c3de07a5e56ce582c236dadafcd
2024-10-01 00:47:02 +02:00
jgart
dd4340a910
gnu: trealla: Update to 2.56.1.
* gnu/packages/prolog.scm (trealla): Update to 2.56.1.

Change-Id: Ifca36ba3ae5d2c7e55dd10592edbd15619e5298f
2024-09-30 17:01:55 -05:00
Sharlatan Hellseher
5ca47c7d8d
gnu: Add python-healpy.
* gnu/packages/astronomy.scm (python-healpy): New variable.

Change-Id: I471145f504d4e8d7a2611a6a1fd3c4f0d0472033
2024-09-30 22:06:32 +01:00
Sharlatan Hellseher
87bc80efcd
gnu: Add python-pytest-cython.
* gnu/packages/python-check.scm (python-pytest-cython): New variable.

Change-Id: I4f223bb0a88db3fd91bb312dfe4558a075ff8bb2
2024-09-30 22:06:32 +01:00
Sharlatan Hellseher
49a013a0ed
gnu: Add python-ci-watson.
* gnu/packages/astronomy.scm (python-ci-watson): New variable.

Change-Id: I0590bdd7c3847d9b5cc80de94e40149c475bd46a
2024-09-30 22:06:32 +01:00
Sharlatan Hellseher
d799c6fee0
gnu: Add python-webbpsf.
* gnu/packages/astronomy.scm (python-webbpsf): New variable.

Change-Id: Ia439e0a3ebee219ae5d680b30cecde717611e579
2024-09-30 22:06:32 +01:00
Sharlatan Hellseher
b607cc9130
gnu: Add webbpsf-data.
* gnu/packages/astronomy.scm (webbpsf-data): New variable.

Change-Id: I8b9836053f81187e2367a943ac981906880856b9
2024-09-30 22:06:32 +01:00
Sharlatan Hellseher
213eae66c7
gnu: Add healpix-cxx.
* gnu/packages/astronomy.scm (healpix-cxx): New variable.

Change-Id: I1d70cd44efa86f89e3fc8f4f60d0b259ecd78acf
2024-09-30 22:06:32 +01:00
Sharlatan Hellseher
f547dd668f
gnu: Add libsharp.
* gnu/packages/astronomy.scm (libsharp): New variable.

Change-Id: I614939ab916357c0ac69de21e954bcc8ef95707d
2024-09-30 22:06:32 +01:00
Sharlatan Hellseher
778bde78cf
gnu: Add healpix.
* gnu/packages/astronomy.scm (healpix): New variable.
(healpix-source): New procedure.

Change-Id: I41dcee1ba9df1988dd9c4ee40b07daab5418e001
2024-09-30 22:06:32 +01:00
Sharlatan Hellseher
7bdbaf0402
gnu: python-sunpy: Update to 6.0.2.
* gnu/packages/astronomy.scm (python-sunpy): Update to 6.0.2.
[arguments]: <#:test-flags>: Enable more tests as the issue is resolved.

Change-Id: Ib7506442d8c1447425a4ca24a7ffeb5c1cd9fa6a
2024-09-30 22:06:31 +01:00
Sharlatan Hellseher
59340b4bfb
gnu: python-stdatamodels: Update to 2.1.0.
* gnu/packages/astronomy.scm (python-stdatamodels): Update to 2.1.0.

Change-Id: Ia3af30338b52007b6967d0be1e6bec5c5c36e3ed
2024-09-30 22:06:31 +01:00
Sharlatan Hellseher
0d5995e4fd
gnu: python-stcal: Update to 1.9.0.
* gnu/packages/astronomy.scm (python-stcal): Update to 1.9.0.

Change-Id: I431c3e02586d5331567cea7f2eb9df2e05b24b00
2024-09-30 22:06:31 +01:00
Sharlatan Hellseher
b0d177ee8e
gnu: python-sbpy: Update to 0.5.0.
* gnu/packages/astronomy.scm (python-sbpy): Update to 0.5.0.
[arguments]: <#:test-flags>: Enable all tests as upstream resolve
issues.  Add parallelisation to tests.

Change-Id: Ibab879910faf45b6d9319e9a5ee4ad59735cce4f
2024-09-30 22:06:31 +01:00
Sharlatan Hellseher
5ed709b53d
gnu: python-regularizepsf: Update to 0.4.0.
* gnu/packages/astronomy.scm (python-regularizepsf): Update to 0.4.0.
[propagated-inputs]: Remove python-sep; add python-sep-pjw.

Change-Id: I1480a686d87a7e9fe971c5b1450db4c74d4ef7e8
2024-09-30 22:06:31 +01:00
Sharlatan Hellseher
8fa5034414
gnu: Add python-sep-pjw.
* gnu/packages/astronomy.scm (python-sep-pjw): New variable.

Change-Id: Ib0ae64a938de53ead32277606f9fc150fae76bd5
2024-09-30 22:06:31 +01:00
Sharlatan Hellseher
a8f1f11d5b
gnu: python-pysiaf: Update to 0.23.3.
* gnu/packages/astronomy.scm (python-pysiaf): Update to 0.23.3.
[propagated-inputs]: Remove python-numpydoc.
[native-inputs]: Add python-setuptools-scm.

Change-Id: Ia20751efc79d391a01b0b50e728646ac38e6b7eb
2024-09-30 22:06:31 +01:00
Sharlatan Hellseher
87de99f5a1
gnu: python-jwst: Update to 1.16.0.
* gnu/packages/astronomy.scm (python-jwst): Update to 1.16.0.

Change-Id: I7084b58eed04d5faf49cbd16aa43bf493a6655d8
2024-09-30 22:06:31 +01:00
Sharlatan Hellseher
12927c2c42
gnu: python-drizzle: Update to 1.15.3.
* gnu/packages/astronomy.scm (python-drizzle): Update to 1.15.3.

Change-Id: I457260332cb97995b94a9a87f49744b5b60edda0
2024-09-30 22:06:31 +01:00
Sharlatan Hellseher
a74463a5de
gnu: python-crds: Update to 11.18.4.
* gnu/packages/astronomy.scm (python-crds): Update to 11.18.4.

Change-Id: Icdbbdda18c64d754d6284ce359393f4d595e468e
2024-09-30 22:06:31 +01:00
Sharlatan Hellseher
4275116311
gnu: python-ginga: Fix tests.
* gnu/packages/astronomy.scm (python-ginga) [arguments]: <#:test-flags>:
Exlude one failing test.

Change-Id: Ic84d89c5cc8cc4938ce8022b1974e5f284179f8e
2024-09-30 22:06:30 +01:00
Sharlatan Hellseher
aa11b72f12
gnu: python-ndcube: Disable failing tests.
* gnu/packages/astronomy.scm (python-ndcube) [arguments]: <#test-flags>:
Disable 2 tests failing after python-astropy updated to 6.1.3.

Change-Id: I95d07fb5d26dda534afbbe44d5dd9f30ebbf6d09
2024-09-30 22:06:30 +01:00
Sharlatan Hellseher
fbf5cc8c4d
gnu: python-astropy: Update to 6.1.3.
* gnu/packages/astronomy.scm (python-astropy): Update to 6.1.3.
[arguments]: <#:test-flags>: Enable more tests.

Change-Id: Id9ad7141bcc06f45bc8408896fc216b655b49642
2024-09-30 22:06:30 +01:00
Sharlatan Hellseher
be3fdbe091
gnu: python-astropy-iers-data: Update to 0.2024.9.16.0.32.21.
* gnu/packages/astronomy.scm (python-astropy-iers-data): Update to 0.2024.9.16.0.32.21.

Change-Id: If1e1d6debacb440eb71fdea51684352a5b8b5d9e
2024-09-30 22:06:30 +01:00
Sharlatan Hellseher
5d6a77d14b
gnu: siril: Update to 1.2.4.
* gnu/packages/astronomy.scm (siril): Update to 1.2.4.

Change-Id: I544b8aa44c0f4256d9ee6c3686c2cb42fb47fdf7
2024-09-30 22:06:30 +01:00
Sharlatan Hellseher
2db4c9fc18
gnu: cfitsio: Update to 4.5.0.
* gnu/packages/astronomy.scm (cfitsio): Update to 4.5.0.
[description]: Adjust indentation, fix some lint warning and replace "dfn"
with "acronym".
[properties]: Add "release-monitoring-url" property.

Change-Id: I6717f2c68d11845839f34eae073965857ca318c5
2024-09-30 22:06:30 +01:00
Sharlatan Hellseher
056be5be26
gnu: gnuastro: Pin cfitsio version.
This change makes sure GNU Astro is keep building after updating CFITSIO
to the latest version as mentioned in <https://issues.guix.gnu.org/73399>.

* gnu/packages/astronomy.scm (cfitsio-4.4): New variable.
(gnuastro) [inputs]: Remove cfitsio; add cfitsio-4.4.

Change-Id: Ia7fa2175dd74a66c1912094efcfb71cbbc998f0a
2024-09-30 22:06:30 +01:00
Sharlatan Hellseher
db990cfe40
gnu: calcmysky: Update to 0.3.3.
* gnu/packages/astronomy.scm (calcmysky): Update to 0.3.3.

Change-Id: Ia2afb27fdc866edcf6f3167484ab70a4ff12a5d6
2024-09-30 22:06:30 +01:00
André Batista
a5b5499f52
gnu: mullvadbrowser: Update to 13.5.3 [security fixes].
Fixes CVEs 2024-6600, 2024-6601, 2024-6602, 2024-6603, 2024-6604,
2024-7519, 2024-7521, 2024-7522, 2024-7524, 2024-7525, 2024-7526,
2024-7527, 2024-7529, 2024-7531, 2024-8381, 2024-8382, 2024-8383 and
2024-8384.

See the Mozilla Foundation Security advisories
<https://www.mozilla.org/en-US/security/advisories/mfsa2024-30/>,
<https://www.mozilla.org/en-US/security/advisories/mfsa2024-34/> and
<https://www.mozilla.org/en-US/security/advisories/mfsa2024-41/>
for details.

* gnu/packages/mullvad-browsers.scm (mozilla-locale): Remove it.
(mozilla-locales): Likewise.
(firefox-locales): Move to the top.
(%mullvadbrowser-locales): Change it to be a plain list of supported
locales.
(%mullvadbrowser-build-date): Update to 20240903073000.
(%mullvadbrowser-version): Update to 13.5.3.
(%mullvadbrowser-firefox-version): Update to 115.15.0esr-13.5-1-build2.
(mullvadbrowser-translation-base): Update to
daed2afc487d1b20efc17feb153156524c6f714b.
(mullvadbrowser) [arguments] <#:phases>: Adjust copy-torbrowser-locales
replacement accordingly.

Change-Id: I5acf486d5f22da9145827b12b48c6c764daaa9bf
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2024-09-30 22:52:23 +02:00
André Batista
f22c2d1c65
gnu: torbrowser: Update to 13.5.3 [security fixes].
Fixes CVEs 2024-6600, 2024-6601, 2024-6602, 2024-6603, 2024-6604,
2024-7519, 2024-7521, 2024-7522, 2024-7524, 2024-7525, 2024-7526,
2024-7527, 2024-7529, 2024-7531, 2024-8381, 2024-8382, 2024-8383 and
2024-8384.

See the Mozilla Foundation Security advisories
<https://www.mozilla.org/en-US/security/advisories/mfsa2024-30/>,
<https://www.mozilla.org/en-US/security/advisories/mfsa2024-34/> and
<https://www.mozilla.org/en-US/security/advisories/mfsa2024-41/>
for details.

* gnu/packages/tor-browsers.scm (%torbrowser-build-date): Update to
20240903073000.
(%torbrowser-version): Update to 13.5.3.
(%torbrowser-firefox-version): Update to 115.15.0esr-13.5-1-build3.
(%torbrowser-locales): Change it to be a plain list of supported locales.
(firefox-locales): New variable.
(torbrowser-translation-base): Update to
daed2afc487d1b20efc17feb153156524c6f714b.
(torbrowser-translation-specific): Update to
6374e3b09c0894b8452fa1ba0b99c807722fc805.
(lld-as-ld-wrapper-16): New variable.
(make-torbrowser)[native-inputs]: Add lld-as-ld-wrapper-16. Use
llvm-16 and clang-16.
  [inputs]: Add firefox-locales.
  [arguments] <#:phases>:  Remove add-bridges.
    setenv, copy-firefox-locales: Update MOZ_CHROME_MULTILOCALE to the
     new %torbrowser-locales format.
    copy-basebrowser-locales, copy-torbrowser-locales: Likewise and adjust
     fluent file path.
    deploy-fonts: Adjust regex expression.
    autoconfig: Remove file-picker configuration workaround. See #71181.

Change-Id: Idf182607798d9111c30db63fe926b7f8cb3ce300
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2024-09-30 22:52:23 +02:00
André Batista
8e04c68010
gnu: go-gitlab-torproject-org-tpo-anti-censorship-pluggable-transports-lyrebird: Update to 0.3.0.
* gnu/packages/golang.scm (go-gitlab-torproject-org-tpo-anti-censorship-pluggable-transports-lyrebird):
Update to 0.3.0.
[propagated-inputs]: Add go-gitlab-torproject-org-tpo-anti-censorship-pluggable-transports-webtunnel.

Change-Id: Iac17163aab6e6010f9fa569fcaf51b217084a572
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2024-09-30 22:52:23 +02:00
André Batista
bb1480a38d
gnu: Add go-gitlab-torproject-org-tpo-anti-censorship-pluggable-transports-webtunnel.
* gnu/packages/golang.scm
  (go-gitlab-torproject-org-tpo-anti-censorship-pluggable-transports-webtunnel):
  New variable.

Change-Id: I84ef723ea03822bd5abf655914f44fb53fd865e2
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2024-09-30 22:52:23 +02:00
Nguyễn Gia Phong
f0a1915564
gnu: dyninst: Remove patch-bad-logic phase.
The short circuit logic (return failure to resolve library path
if ldconfig not found) is no longer present on Dyninst 13.

* gnu/packages/instrumentation.scm (dyninst):
  Remove patch-bad-logic phase.

Fixes: 254c8f2c8c ("gnu: dyninst: Update to 13.0.0.")
References: https://github.com/dyninst/dyninst/pull/1362
Change-Id: I021ec71416da90d11705ef04fba7c170558ef3c6
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2024-09-30 22:52:23 +02:00
Romain GARBAGE
c51d7fd569
gnu: netcdf-parallel-openmpi: Build shared library.
* gnu/packages/maths.scm (netcdf-parallel-openmpi) [arguments]: Enable
building of shared library.

Change-Id: I6e901d5939108421e041252207f10f4800890e97
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2024-09-30 22:52:23 +02:00
Ludovic Courtès
210bbf9a39
man-db: Correctly resolve man page links.
Fixes <https://issues.guix.gnu.org/73259>.

Fixes a bug introduced in 8224555802
whereby a link such as “.so man1/bzdiff.1” would resolve to the file
that contains the link (in this case ‘bzcmp.1.zst’), as opposed to the
actual link target.  As a result, ‘man-page->entry’ would recurse,
reopening the man page that contains the link until file descriptor
exhaustion.

* guix/man-db.scm (mandb-entries): In second argument to
‘man-page->entry’, return either FILE-GZ or FILE-ZST, but not FILE.

Change-Id: I06a7a6905a98524efc889a18e81352bf9eec5743
2024-09-30 22:52:23 +02:00
Roel Janssen
d057d59170
gnu: Update python-rdflib to 7.0.0.
* gnu/packages/rdf.scm: Add updated recipe for python-rdflib; Keep
  python-rdflib-6 for compatibility.
* gnu/packages/python-xyz.scm: Build python-prov with python-rdflib-6 because
  rdflib-7 is not supported.
* gnu/packages/bioinformatics.scm: Build cwltool with python-rdflib-6 because
  it fails to build with rdflib-7.

Change-Id: Ibc40c16ede20e69e702915488d6b2f0a7e70b868
2024-09-30 22:48:09 +02:00
Dariqq
2bd04883ed
gnu: skia: Honor #:tests? argument.
* gnu/packages/graphics.scm (skia)[arguments]: Skip 'check phase
when #:tests? is false.

Change-Id: I529d91cf9cedfe36fa14a2ae514589810054eac8
Signed-off-by: Tobias Geerinckx-Rice <me@tobias.gr>
2024-09-29 02:00:00 +02:00
Tobias Geerinckx-Rice
de5fe1fb24
gnu: emacs-ivy: Fix upstream hash mismatch.
The only change is the build-time name of ivy.info:

  - This is docs5eOqw.info, produced by makeinfo version 6.8
  + This is doczSQuZD.info, produced by makeinfo version 6.8

* gnu/packages/emacs-xyz.scm (emacs-ivy)[source]: Update sha256.

Change-Id: I2234365159e0020f5c8b4fd90f56bb7a4f7e9590
2024-09-29 02:00:00 +02:00
Konrad Hinsen
7e63a35ff2
gnu: ecl-ciel: Remove build phase "build-image" and output "image".
* gnu/packages/lisp-xyz.scm (ecl-ciel)[outputs]: Remove "image".
  [arguments]: Remove 'build-image' phase.

Change-Id: I6640add7f28ac655180fc9b419684dc9d51f5130
Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
2024-09-30 14:54:07 +02:00
Ashish SHUKLA
1a6a85768e
gnu: Add got.
* gnu/packages/version-control.scm (got): New variable.

Change-Id: I34d19d90ab36e8831fa88668676aa2399356b002
Signed-off-by: Andreas Enge <andreas@enge.fr>
2024-09-30 14:18:20 +02:00
Efraim Flashner
2545afa64a
guix: cpu: Add detection for znver5.
* guix/cpu.scm (cpu->gcc-architecture): Add detection for znver5.
(gcc-architecture->micro-architecture-level): Add entry for znver5.

Change-Id: If0ff9540517cb9ac869afabf413c9993166d78a5
2024-09-30 13:38:33 +03:00
Efraim Flashner
1d4a44a29b
gnu: gcc-14: Add tuning target.
* gnu/packages/gcc.scm (%gcc-14-x86_64-micro-architectures): New
variable.
(gcc-14)[properties]: Use it.

Change-Id: I00f9e2a4c9d590f97977275b157002ac330b895b
2024-09-30 13:38:15 +03:00