Commit graph

33008 commits

Author SHA1 Message Date
Ricardo Wurmus
6caf80fbaf
gnu: r-lme4: Update to 1.1-21.
* gnu/packages/statistics.scm (r-lme4): Update to 1.1-21.
[native-inputs]: Move r-rcpp and r-rcppeigen from here...
[propagated-inputs]: ...to here; add r-boot.
2019-03-07 23:52:39 +01:00
Ricardo Wurmus
34a98f79d7
gnu: r-forcats: Update to 0.4.0.
* gnu/packages/statistics.scm (r-forcats): Update to 0.4.0.
[propagated-inputs]: Add r-ellipsis.
2019-03-07 23:52:39 +01:00
Ricardo Wurmus
6a0a2342dd
gnu: r-r6: Update to 2.4.0.
* gnu/packages/statistics.scm (r-r6): Update to 2.4.0.
2019-03-07 23:52:38 +01:00
Ricardo Wurmus
4b16c00e9a
gnu: r-formatr: Update to 1.6.
* gnu/packages/statistics.scm (r-formatr): Update to 1.6.
2019-03-07 23:52:38 +01:00
Ricardo Wurmus
1f7a76a0c1
gnu: r-evaluate: Update to 0.13.
* gnu/packages/statistics.scm (r-evaluate): Update to 0.13.
2019-03-07 23:52:38 +01:00
Ricardo Wurmus
48a4b775b9
gnu: r-mgcv: Update to 1.8-27.
* gnu/packages/statistics.scm (r-mgcv): Update to 1.8-27.
2019-03-07 23:52:38 +01:00
Ricardo Wurmus
71fe7f9d21
gnu: r-stringi: Update to 1.3.1.
* gnu/packages/statistics.scm (r-stringi): Update to 1.3.1.
2019-03-07 23:52:38 +01:00
Ricardo Wurmus
605fcf8a23
gnu: r-stringr: Update to 1.4.0.
* gnu/packages/statistics.scm (r-stringr): Update to 1.4.0.
2019-03-07 23:52:38 +01:00
Ricardo Wurmus
17abcd521a
gnu: r-ranger: Update to 0.11.2.
* gnu/packages/statistics.scm (r-ranger): Update to 0.11.2.
2019-03-07 23:52:38 +01:00
Ricardo Wurmus
9066534d4c
gnu: r-openssl: Update to 1.2.2.
* gnu/packages/statistics.scm (r-openssl): Update to 1.2.2.
2019-03-07 23:52:38 +01:00
Ricardo Wurmus
a1d9387d82
gnu: r-catools: Update to 1.17.1.2.
* gnu/packages/statistics.scm (r-catools): Update to 1.17.1.2.
2019-03-07 23:52:37 +01:00
Ricardo Wurmus
4fadef3ba0
gnu: r-xml: Update to 3.98-1.19.
* gnu/packages/statistics.scm (r-xml): Update to 3.98-1.19.
2019-03-07 23:52:37 +01:00
Ricardo Wurmus
bc7895e1cf
gnu: r-flexmix: Update to 2.3-15.
* gnu/packages/statistics.scm (r-flexmix): Update to 2.3-15.
2019-03-07 23:52:37 +01:00
Ricardo Wurmus
6be62a5a72
gnu: r-irlba: Update to 2.3.3.
* gnu/packages/statistics.scm (r-irlba): Update to 2.3.3.
2019-03-07 23:52:37 +01:00
Ricardo Wurmus
b22a20405a
gnu: r-registry: Update to 0.5-1.
* gnu/packages/statistics.scm (r-registry): Update to 0.5-1.
2019-03-07 23:52:37 +01:00
Ricardo Wurmus
3db71d065c
gnu: r-r-utils: Update to 2.8.0.
* gnu/packages/statistics.scm (r-r-utils): Update to 2.8.0.
2019-03-07 23:52:37 +01:00
Ricardo Wurmus
21886e730b
gnu: r-r-rsp: Update to 0.43.1.
* gnu/packages/statistics.scm (r-r-rsp): Update to 0.43.1.
2019-03-07 23:52:37 +01:00
Ricardo Wurmus
ed4100dc96
gnu: r-mvtnorm: Update to 1.0-10.
* gnu/packages/statistics.scm (r-mvtnorm): Update to 1.0-10.
2019-03-07 23:52:37 +01:00
Ricardo Wurmus
ebd37b49f9
gnu: r-tidyr: Update to 0.8.3.
* gnu/packages/statistics.scm (r-tidyr): Update to 0.8.3.
2019-03-07 23:52:37 +01:00
Ricardo Wurmus
84840deb95
gnu: r-purrr: Update to 0.3.1.
* gnu/packages/statistics.scm (r-purrr): Update to 0.3.1.
2019-03-07 23:52:36 +01:00
Ricardo Wurmus
b58220f599
gnu: r-pbapply: Update to 1.4-0.
* gnu/packages/statistics.scm (r-pbapply): Update to 1.4-0.
2019-03-07 23:52:36 +01:00
Ricardo Wurmus
e51096b2ea
gnu: r-vgam: Update to 1.1-1.
* gnu/packages/statistics.scm (r-vgam): Update to 1.1-1.
2019-03-07 23:52:36 +01:00
Ricardo Wurmus
aeb11b7549
gnu: r-ggthemes: Update to 4.1.0.
* gnu/packages/statistics.scm (r-ggthemes): Update to 4.1.0.
2019-03-07 23:52:36 +01:00
Ricardo Wurmus
d235cf7268
gnu: r-shiny: Update to 1.2.0.
* gnu/packages/cran.scm (r-shiny): Update to 1.2.0.
[arguments]: Adjust processing of minified JavaScript.
2019-03-07 23:52:36 +01:00
Ricardo Wurmus
83ef38b038
gnu: r-epi: Update to 2.35.
* gnu/packages/cran.scm (r-epi): Update to 2.35.
2019-03-07 23:52:36 +01:00
Ricardo Wurmus
75cbc80037
gnu: r-network: Update to 1.14-377.
* gnu/packages/cran.scm (r-network): Update to 1.14-377.
[propagated-inputs]: Add r-magrittr and r-tibble.
2019-03-07 23:52:36 +01:00
Ricardo Wurmus
fadc49c6e5
gnu: r-vegan: Update to 2.5-4.
* gnu/packages/cran.scm (r-vegan): Update to 2.5-4.
2019-03-07 23:52:36 +01:00
Ricardo Wurmus
d1c2fd8eeb
gnu: r-future-apply: Update to 1.2.0.
* gnu/packages/cran.scm (r-future-apply): Update to 1.2.0.
2019-03-07 23:52:36 +01:00
Ricardo Wurmus
6e8b38d3e8
gnu: Add r-furrr.
* gnu/packages/cran.scm (r-furrr): New variable.
2019-03-07 23:52:35 +01:00
Ricardo Wurmus
f0bff69873
gnu: Add r-survey.
* gnu/packages/cran.scm (r-survey): New variable.
2019-03-07 23:52:35 +01:00
Ricardo Wurmus
dab3e92c94
gnu: Add r-magick.
* gnu/packages/cran.scm (r-magick): New variable.
2019-03-07 23:52:35 +01:00
Ricardo Wurmus
3f22a115bd
gnu: Add r-ellipsis.
* gnu/packages/cran.scm (r-ellipsis): New variable.
2019-03-07 23:52:35 +01:00
Pierre Neidhardt
d748cb5f47
gnu: Add autorandr.
* gnu/packages/xdisorg.scm (autorandr): New variable.
2019-03-07 22:23:38 +01:00
Julien Lepiller
945723be97
gnu: php: Update to 7.3.3.
* gnu/packages/php.scm (php): Update to 7.3.3.
2019-03-07 21:18:30 +01:00
Efraim Flashner
dcf4d01f30
gnu: libmicrohttpd: Enable parallel tests.
* gnu/packages/gnunet.scm (libmicrohttpd)[arguments]: Don't disable
parallel tests.
2019-03-07 22:00:53 +02:00
Efraim Flashner
c4bfce994e
gnu: libmicrohttpd: Update to 0.9.63.
* gnu/packages/gnunet.scm (libmicrohttpd): Update to 0.9.63.
[arguments]: Remove custom phase to add missing LDFLAGS.
2019-03-07 22:00:53 +02:00
Efraim Flashner
0ef54303f3
gnu: c-graph: Update to 2.0.1.
* gnu/packages/maths.scm (c-graph): Update to 2.0.1.
2019-03-07 22:00:52 +02:00
Pierre Neidhardt
b60e9fb82f
gnu: fuseiso: Fix typo in description.
* gnu/packages/linux.scm (fuseiso)[description]: Fix typo.
2019-03-07 17:12:46 +01:00
Tobias Geerinckx-Rice
1e1142d8cb
gnu: Add nullmailer.
* gnu/packages/mail.scm (nullmailer): New public variable.
2019-03-07 15:39:46 +01:00
Ricardo Wurmus
3189fad217
gnu: neovim: Let build phase return #T.
* gnu/packages/vim.scm (neovim)[arguments]: Return #T from "patch-tic" phase.
2019-03-07 13:39:45 +01:00
Ricardo Wurmus
3b296475bf
gnu: cd-hit: Support longer sequences.
* gnu/packages/bioinformatics.scm (cd-hit)[arguments]: Pass MAX_SEQ to make
flags.
2019-03-07 13:38:01 +01:00
Ricardo Wurmus
237ee6f2b2
gnu: python2-fastlmm: Disable tests.
* gnu/packages/machine-learning.scm (python2-fastlmm)[arguments]: Disable
tests.
2019-03-07 13:37:58 +01:00
Rutger Helling
9fd6ad3e35
gnu: wireguard: Update to 0.0.20190227.
* gnu/packages/vpn.scm (wireguard): Update to 0.0.20190227.
[arguments]: Disable tests.
2019-03-07 12:23:43 +01:00
Rutger Helling
9cb4bda222
gnu: nftables: Update to 0.9.0.
* gnu/packages/linux.scm (nftables): Update to 0.9.0.
[arguments]: Add "--disable-man-doc" configure flag.
2019-03-07 12:08:21 +01:00
Kei Kebreau
ccf2446730
gnu: minetest: Update to 5.0.0.
* gnu/packages/games.scm (minetest-data, minetest): Update to 5.0.0.
2019-03-07 05:31:19 -05:00
Gábor Boskovits
0a10abf73e
gnu: neovim: Fix #34616.
This fixes a segmentation fault in neovim, where an error return value
is passed in as a pointer.

* gnu/packages/vim.scm (neovim)[arguments](phases): Add 'patch-tic phase.
2019-03-07 11:08:31 +01:00
Gábor Boskovits
2702aa9136
gnu: unibilium: Update to 2.0.0.
* gnu/packages/terminal.scm (unibilium): Update to 2.0.0.
[native-inputs]: Add perl.
2019-03-07 09:48:03 +01:00
Tobias Geerinckx-Rice
abe6e670d3
gnu: sane-backends-minimal: Fix USB support.
* gnu/packages/scanner.scm (sane-backends-minimal)[inputs]: Replace
libusb-compat with libusb.
[arguments]: Disable tests that require USB access.
2019-03-07 02:13:26 +01:00
Mark H Weaver
274fa49100
gnu: linux-libre: Update to 5.0.
* gnu/packages/linux.scm (%linux-libre-version): Update to 5.0.
(%linux-libre-hash): Update hash.
(%linux-libre-4.20-patches): Rename to ...
(%linux-libre-5.0-patches): ... this.
(linux-libre, linux-libre-arm-generic, linux-libre-arm-omap2plus):
Use %linux-libre-5.0-patches instead of %linux-libre-4.20-patches.
* gnu/packages/aux-files/linux-libre/4.20-arm.conf,
gnu/packages/aux-files/linux-libre/4.20-arm64.conf,
gnu/packages/aux-files/linux-libre/4.20-i686.conf,
gnu/packages/aux-files/linux-libre/4.20-x86_64.conf: Delete files.
* gnu/packages/aux-files/linux-libre/5.0-arm.conf,
gnu/packages/aux-files/linux-libre/5.0-arm64.conf,
gnu/packages/aux-files/linux-libre/5.0-i686.conf,
gnu/packages/aux-files/linux-libre/5.0-x86_64.conf: New files.
* Makefile.am (AUX_FILES): Adjust accordingly.
2019-03-06 17:51:55 -05:00
Mark H Weaver
9870f3ec61
gnu: linux-libre@4.19: Update to 4.19.27.
* gnu/packages/linux.scm (%linux-libre-4.19-version): Update to 4.19.27.
(%linux-libre-4.19-hash): Update hash.
2019-03-06 17:51:12 -05:00