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Author SHA1 Message Date
Ricardo Wurmus
e8ae22a6e5
gnu: r-openxlsx: Update to 4.1.4. 
* gnu/packages/cran.scm (r-openxlsx): Update to 4.1.4.
[propagated-inputs]: Remove r-rlang.
 2019-12-06 21:39:24 +01:00
Ricardo Wurmus
91a38c56e4
gnu: r-heatmaply: Update to 1.0.0. 
* gnu/packages/cran.scm (r-heatmaply): Update to 1.0.0.
[propagated-inputs]: Add r-egg.
 2019-12-06 21:39:24 +01:00
Ricardo Wurmus
0c836f58cf
gnu: Add r-egg. 
* gnu/packages/cran.scm (r-egg): New variable.
 2019-12-06 21:39:24 +01:00
Ricardo Wurmus
75f021f4a6
gnu: r-cubature: Update to 2.0.4. 
* gnu/packages/cran.scm (r-cubature): Update to 2.0.4.
 2019-12-06 21:39:24 +01:00
Ricardo Wurmus
ff653ace8f
gnu: r-geometry: Update to 0.4.5. 
* gnu/packages/cran.scm (r-geometry): Update to 0.4.5.
 2019-12-06 21:39:24 +01:00
Ricardo Wurmus
103eef6442
gnu: r-htmltable: Update to 1.13.3. 
* gnu/packages/cran.scm (r-htmltable): Update to 1.13.3.
 2019-12-06 21:39:24 +01:00
Björn Höfling
92dddf6ba1
gnu: ruby-i18n: Update to 1.7.0. 
* gnu/packages/ruby.scm (ruby-i18n): Update to 1.7.0.
[home-page]: Update to new location.
 2019-12-06 20:09:15 +01:00
Björn Höfling
9de12df788
gnu: ruby-public-suffix: Update to 4.0.1. 
* gnu/packages/ruby.scm (ruby-public-suffix): Update to 4.0.1.
 2019-12-06 20:09:15 +01:00
Björn Höfling
91f7ee8738
gnu: ruby-addressable: Update to 2.7.0. 
* gnu/packages/ruby.scm (ruby-addressable): Update to 2.7.0.
 2019-12-06 20:09:14 +01:00
Björn Höfling
b2244c6849
gnu: ruby-rspec-its: Update to 1.3.0. 
* gnu/packages/ruby.scm (ruby-rspec-its): Update to 1.3.0.
[source]: Remove patch.
[arguments]: Add phase to fix ffi-dependency-version.
[native-inputs]: Add ruby-ffi.
 2019-12-06 20:09:14 +01:00
Hartmut Goebel
0a71e34e49
gnu: Add python-geoip2. 
* gnu/packages/geo.scm (python-geoip2): New variable.
 2019-12-06 19:38:56 +01:00
Hartmut Goebel
b1414a8136
gnu: Add python-maxminddb. 
* gnu/packages/geo.scm (python-maxminddb): New variable.
 2019-12-06 19:38:56 +01:00
Hartmut Goebel
53c9b39850
gnu: Add libmaxminddb. 
* gnu/packages/geo.scm (libmaxminddb): New variable.
 2019-12-06 19:38:56 +01:00
Hartmut Goebel
a7469d1602
gnu: Add gunicorn. 
* gnu/packages/python-web.scm (gunicorn): New variable
 2019-12-06 19:38:56 +01:00
Jan Nieuwenhuizen
9720104c43
gnu: Add ncompress. 
* gnu/packages/compression.scm (ncompress): New variable.
* gnu/packages/patches/compress-fix-softlinks.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
 2019-12-06 06:52:36 +01:00
Mark H Weaver
d4d7bf60e8
gnu: linux-libre: Update to 5.3.15. 
* gnu/packages/linux.scm (linux-libre-5.3-version): Update to 5.3.15.
(linux-libre-5.3-pristine-source): Update hash.
 2019-12-05 14:29:45 -05:00
Mark H Weaver
4dcd63d5a5
gnu: linux-libre@4.19: Update to 4.19.88. 
* gnu/packages/linux.scm (linux-libre-4.19-version): Update to 4.19.88.
(linux-libre-4.19-pristine-source): Update hash.
 2019-12-05 14:29:10 -05:00
Mark H Weaver
1c90bc7ee6
gnu: linux-libre@4.14: Update to 4.14.158. 
* gnu/packages/linux.scm (linux-libre-4.14-version): Update to 4.14.158.
(linux-libre-4.14-pristine-source): Update hash.
 2019-12-05 14:28:34 -05:00
Mark H Weaver
5ecee81290
gnu: linux-libre@4.9: Update to 4.9.206. 
* gnu/packages/linux.scm (linux-libre-4.9-version): Update to 4.9.206.
(linux-libre-4.9-pristine-source): Update hash.
 2019-12-05 14:27:58 -05:00
Mark H Weaver
2eec86e145
gnu: linux-libre@4.4: Update to 4.4.206. 
* gnu/packages/linux.scm (linux-libre-4.4-version): Update to 4.4.206.
(linux-libre-4.4-pristine-source): Update hash.
 2019-12-05 14:26:46 -05:00
Clément Lassieur
2c2fc24b89
gnu: Add west. 
* gnu/packages/embedded.scm (west): New variable.
 2019-12-05 16:54:59 +01:00
Clément Lassieur
34bf686952
gnu: Add python-pykwalify. 
* gnu/packages/python-xyz.scm (python-pykwalify): New variable.
 2019-12-05 16:54:59 +01:00
Pierre Neidhardt
88f06fd015
gnu: Really move lisp libraries to lisp-xyz, uglify-js to javascript and stumpwm to wm. 
* gnu/local.mk: Include lisp-xyz.scm.
* gnu/packages/lisp-xyz.scm: New file.
* gnu/packages/lisp.scm: Move all lisp libraries to lisp-xyz.scm, uglify-js to
  javascript.scm and stumpwm to wm.scm.
* gnu/packages/javascript.scm: Add uglify-js.
* gnu/packages/wm.scm: Add stumpwm.
* gnu/packages/bioinformatics.scm: Find uglify-js in javascript.scm.
* gnu/packages/machine-learning.scm: Depend on lisp-xyz.scm instead of lisp.scm.
* gnu/packages/web.scm: Find uglify-js in javascript.scm.
* gnu/packages/web-browsers.scm: Depend on lisp-xyz.scm instead of lisp.scm.
* guix/build-system/minify.scm (default-uglify-js): Find uglify-js in
  javascript module instead of lisp.
 2019-12-05 16:23:06 +01:00
Tobias Geerinckx-Rice
ba362ec867
gnu: libimagequant: Update to 2.12.5. 
* gnu/packages/image.scm (libimagequant): Update to 2.12.5.
 2019-12-05 15:38:52 +01:00
Tobias Geerinckx-Rice
252f44ffd9
gnu: procenv: Update to 0.51. 
* gnu/packages/linux.scm (procenv): Update to 0.51.
 2019-12-05 15:38:52 +01:00
Tobias Geerinckx-Rice
d9544d91a6
Revert "gnu: Properly move lisp libraries to lisp-xyz, uglify-js to javascript and stumpwm to wm." 
This reverts commit ac1ee30f4f, which
still breaks ‘guix pull’.
 2019-12-05 15:38:52 +01:00
Efraim Flashner
b665a24619
gnu: librsvg-next: Use generate-all-checksums. 
* gnu/packages/gnome.scm (librsvg-next)[arguments]: Use
generate-all-checksums instead of manually traversing the directories.
 2019-12-05 16:31:21 +02:00
Efraim Flashner
73bd8ab669
Revert "build-system/linux-module: Accept a #:make-flags keyword." 
I should've tested this better before pushing the commit.

This reverts commit fabd4900d8.
 2019-12-05 15:37:39 +02:00
Pierre Neidhardt
ac1ee30f4f
gnu: Properly move lisp libraries to lisp-xyz, uglify-js to javascript and stumpwm to wm. 
* gnu/local.mk: Include lisp-xyz.scm.
* gnu/packages/lisp-xyz.scm: New file.
* gnu/packages/lisp.scm: Move all lisp libraries to lisp-xyz.scm, uglify-js to
  javascript.scm and stumpwm to wm.scm.
* gnu/packages/javascript.scm: Add uglify-js.
* gnu/packages/wm.scm: Add stumpwm.
* gnu/packages/bioinformatics.scm: Find uglify-js in javascript.scm.
* gnu/packages/machine-learning.scm: Depend on lisp-xyz.scm instead of lisp.scm.
* gnu/packages/web.scm: Find uglify-js in javascript.scm.
* gnu/packages/web-browsers.scm: Depend on lisp-xyz.scm instead of lisp.scm.
* guix/build-system/minify.scm (default-uglify-js): Find uglify-js in
  javascript module instead of lisp.
 2019-12-05 13:48:47 +01:00
Marius Bakke
29e621a013
gnu: Remove unused module import. 
* gnu/packages/image.scm: Do not import (gnu packages gcc).
 2019-12-04 23:18:24 +01:00
Marius Bakke
0fa9f29a51
gnu: libjpeg-turbo: Fix CVE-2019-13960 and CVE-2019-2201. 
* gnu/packages/patches/libjpeg-turbo-CVE-2019-2201.patch: New file.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
* gnu/packages/image.scm (libjpeg-turbo/fixed): New variable.
(libjpeg-turbo)[replacement]: New field.
 2019-12-04 23:18:24 +01:00
Tobias Geerinckx-Rice
4fe7adcbcc
gnu: pd: Update to 0.50-2. 
* gnu/packages/music.scm (pd): Update to 0.50-2.
 2019-12-04 23:10:21 +01:00
Tobias Geerinckx-Rice
ce63a3b90a
gnu: libgig: Update to 4.2.0. 
* gnu/packages/music.scm (libgig): Update to 4.2.0.
 2019-12-04 23:10:21 +01:00
Tobias Geerinckx-Rice
29a87ed18c
gnu: imapfilter: Update to 2.6.16. 
* gnu/packages/mail.scm (imapfilter): Update to 2.6.16.
[arguments]: Remove ‘fix-include-path’ phase.
 2019-12-04 23:10:21 +01:00
Tobias Geerinckx-Rice
8f15c1c9fe
gnu: mpop: Update to 1.4.6. 
* gnu/packages/mail.scm (mpop): Update to 1.4.6.
 2019-12-04 23:10:21 +01:00
Tobias Geerinckx-Rice
f3d4015385
gnu: girara: Fetch sources from git. 
The tarball URI is having server issues.  Use the upstream git
repository instead until this is resolved.

Reported by Marius Bakke <mbakke@fastmail.com>.

* gnu/packages/gtk.scm (girara)[source]: Switch to GIT-FETCH.
 2019-12-04 23:10:21 +01:00
Pierre Neidhardt
6b84a31d90
gnu: emacs-org-contrib: Fix build. 
* gnu/packages/emacs-xyz.scm (emacs-org-contrib): Refer to the updated
installation directory.
 2019-12-04 22:29:38 +01:00
Pierre Neidhardt
e18aeb416d
gnu: emacs-scel: Fix build. 
* gnu/packages/emacs-xyz.scm (emacs-scel): Refer to the updated installation
directory.
 2019-12-04 22:29:38 +01:00
Leo Famulari
c63d4725d1
gnu: knot: Update to 2.9.1 [fixes CVE-2019-19331]. 
* gnu/packages/dns.scm (knot): Update to 2.9.1.
 2019-12-04 16:09:20 -05:00
Pierre Neidhardt
1cd9149938
gnu: notmuch: Fix build. 
* gnu/packages/mail.scm (notmuch): Refer to the updated installation
directory.
 2019-12-04 21:57:12 +01:00
Marius Bakke
66c15f72f8
gnu: ffmpeg: Update to 3.4.7. 
* gnu/packages/video.scm (ffmpeg-3.4): Update to 3.4.7.
 2019-12-04 21:26:56 +01:00
Marius Bakke
63e8df382f
gnu: feh: Update to 3.3. 
* gnu/packages/patches/feh-fix-tests-for-imlib2-1.6.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
* gnu/packages/image-viewers.scm (feh): Update to 3.3.
[source](patches): Remove.
 2019-12-04 21:26:50 +01:00
Marius Bakke
33b59c1a3e
Merge branch 'staging' 2019-12-04 20:12:41 +01:00
Marius Bakke
936aa05209
gnu: Remove duplicate nlohmann-json-cpp package. 
* gnu/packages/serialization.scm (nlohmann-json-cpp): Move variable ...
* gnu/packages/cpp.scm (nlohmann-json-cpp): ... here.  Mark as deprecated by
JSON-MODERN-CXX.
* gnu/packages/jupyter.scm (xeus)[inputs]: Change NLOHMANN-JSON-CPP to
JSON-MODERN-CXX.
* gnu/packages/video.scm (mkvtoolnix)[inputs]: Likewise.
 2019-12-04 20:10:34 +01:00
Danny Milosavljevic
208e743415
gnu: sunxi-tools: Simplify build. 
* gnu/packages/admin.scm (sunxi-tools-source): New procedure.
(sunxi-target-tools): New variable.
(sunxi-tools)[source]: Use sunxi-tools-source.
[native-inputs]: Remove cross-gcc, cross-libc, cross-libc-static.
Add sunxi-target-tools.
[arguments]<#:make-flags>: Modify.
[arguments]<#:phases>[set-environment-up]: Delete phase.
[build-armhf]: Delete phase.
[install]: Modify.
 2019-12-04 18:56:31 +01:00
Ludovic Courtès
ed15dfcf31
machine: ssh: <machine-ssh-configuration> can include the host key. 
* gnu/machine/ssh.scm (<machine-ssh-configuration>)[host-key]: New field.
(machine-ssh-session): Pass #:host-key to 'open-ssh-session'.
* doc/guix.texi (Invoking guix deploy): Document it.
 2019-12-04 18:16:08 +01:00
Ludovic Courtès
2b8682841d
ssh: 'open-ssh-session' can be passed the expected host key. 
* guix/ssh.scm (open-ssh-session): Add #:host-key parameter.
Pass #:knownhosts to 'make-session'.  When HOST-KEY is true, call
'authenticate-server*' instead of 'authenticate-server'.
 2019-12-04 18:16:08 +01:00
Ludovic Courtès
f5c180180e
ssh: Always authenticate the server [security fix]. 
Until now, users of 'open-ssh-session', including "guix deploy" and
"GUIX_DAEMON_SOCKET=ssh://…" (but not "guix offload"), would not
authenticate the SSH server they're talking to.

* guix/ssh.scm (open-ssh-session): Call 'authenticate-server'.
 2019-12-04 18:16:08 +01:00
Ludovic Courtès
114dcb429a
ssh: Add 'authenticate-server*' and use it for offloading. 
* guix/scripts/offload.scm (host-key->type+key): Remove.
(open-ssh-session): Replace server authentication code with a call to
'authenticate-server*'.
* guix/ssh.scm (host-key->type+key, authenticate-server*): New
procedures.
 2019-12-04 18:16:08 +01:00
Timotej Lazar
d75540473f
gnu: bitlbee: Use Python 3. 
* gnu/packages/messaging.scm (bitlbee)[inputs]: Replace python-2 with python.
[arguments]: Set the PYTHON environment variable before configuring.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2019-12-04 18:16:08 +01:00