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Aleksandr Vityazev
e580039cf8
gnu: Add rust-itoa-1. 
* gnu/packages/crates-io.scm (rust-itoa-1): New variable.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
 2022-01-22 13:09:29 +01:00
Aleksandr Vityazev
da3dd5afa5
gnu: rust-serde-derive-1: Update to 1.0.133. 
* gnu/packages/crates-io.scm (rust-serde-derive-1): Update to 1.0.133.
[description]: End with a period.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
 2022-01-22 13:09:28 +01:00
Aleksandr Vityazev
ddd4e12c9b
gnu: rust-serde-1: Update to 1.0.133. 
* gnu/packages/crates-io.scm (rust-serde-1): Update to 1.0.133.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
 2022-01-22 13:09:28 +01:00
Aleksandr Vityazev
cdb03967e5
gnu: rust-byteorder-1: Update to 1.4.3. 
* gnu/packages/crates-io.scm (rust-byteorder-1): Update to 1.4.3.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
 2022-01-22 13:09:28 +01:00
Aleksandr Vityazev
2cf4e34889
gnu: rust-num-cpus-1: Update to 1.13.1. 
* gnu/packages/crates-io.scm (rust-num-cpus-1): Update to 1.13.1.
[source, arguments]: Fix formatting.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
 2022-01-22 13:09:27 +01:00
Aleksandr Vityazev
f9bc1e6fee
gnu: Add rust-blakeout-0.3. 
* gnu/packages/crates-io.scm (rust-blakeout-0.3): New variable.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
 2022-01-22 13:09:27 +01:00
Aleksandr Vityazev
f14ccf4043
gnu: Add rust-blake2-0.9. 
* gnu/packages/crates-io.scm (rust-blake2-0.9): New variable.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
 2022-01-22 13:09:26 +01:00
Aleksandr Vityazev
600d704011
gnu: rust-signature-1: Update to 1.5.0. 
* gnu/packages/crates-io.scm (rust-signature-1): Update to 1.5.0.
[source, description]: Fix formatting.
[arguments]: <#:cargo-inputs>: Use rust-digest-0.10 and rust-rand-core-0.6.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
 2022-01-22 13:09:26 +01:00
Aleksandr Vityazev
f73de79115
gnu: rust-signature-derive-1: Update to 1.0.0-pre.4. 
* gnu/packages/crates-io.scm (rust-signature-derive-1): Update to 1.0.0-pre.4.
[source, arguments]: Fix formatting.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
 2022-01-22 13:09:25 +01:00
Aleksandr Vityazev
e9d0c00aa2
gnu: Add rust-chacha20poly1305-0.9. 
* gnu/packages/crates-io.scm (rust-chacha20poly1305-0.9): New variable.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
 2022-01-22 13:09:25 +01:00
Aleksandr Vityazev
898c265013
gnu: Add rust-poly1305-0.7. 
* gnu/packages/crates-io.scm (rust-poly1305-0.7): New variable.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
 2022-01-22 13:09:24 +01:00
Aleksandr Vityazev
21a93bf85f
gnu: Add rust-chacha20-0.8. 
* gnu/packages/crates-io.scm (rust-chacha20-0.8): New variable.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
 2022-01-22 13:09:24 +01:00
Aleksandr Vityazev
b3a14b57b9
gnu: Add rust-aead-0.4. 
* gnu/packages/crates-io.scm (rust-aead-0.4): New variable.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
 2022-01-22 13:09:24 +01:00
Aleksandr Vityazev
22a586bca5
gnu: rust-blobby-0.3: Update to 0.3.1. 
* gnu/packages/crates-io.scm (rust-blobby-0.3): Update to 0.3.1.
[arguments]: <#:cargo-development-inputs>: Use rust-hex-0.4.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
 2022-01-22 13:09:23 +01:00
Aleksandr Vityazev
371e4ce4e1
gnu: Add rust-ecies-ed25519-0.5. 
* gnu/packages/crates-io.scm (rust-ecies-ed25519-0.5): New variable.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
 2022-01-22 13:09:23 +01:00
Aleksandr Vityazev
02f77e4825
gnu: rust-aes-gcm-0.6: Inherit from rust-aes-gcm-0.8. 
* gnu/packages/crates-io.scm (rust-aes-gcm-0.6): Inherit from rust-aes-gcm-0.8.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
 2022-01-22 13:09:22 +01:00
Aleksandr Vityazev
1345ae52fa
gnu: Add rust-aes-gcm-0.8. 
* gnu/packages/crates-io.scm (rust-aes-gcm-0.8): New variable.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
 2022-01-22 13:09:22 +01:00
Aleksandr Vityazev
3d4eebb54d
gnu: Add rust-x25519-dalek-1. 
* gnu/packages/crates-io.scm (rust-x25519-dalek-1): New variable.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
 2022-01-22 13:09:21 +01:00
Aleksandr Vityazev
0dbc002bd1
gnu: rust-curve25519-dalek-3: Update to 3.2.0. 
* gnu/packages/crates-io.scm (rust-curve25519-dalek-3): Update to 3.2.0.
[source, description]: Fix formatting.
[arguments]: Enable build, add #:cargo-development-inputs.
<#:cargo-inputs>: Add rust-fiat-crypto, change rust-packed-simd
to rust-packed-simd-2.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
 2022-01-22 13:09:21 +01:00
Aleksandr Vityazev
100fc7507b
gnu: Add rust-fiat-crypto-0.1. 
* gnu/packages/crates-io.scm (rust-fiat-crypto-0.1): New variable.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
 2022-01-22 13:09:20 +01:00
Aleksandr Vityazev
590dc88700
gnu: Add rust-simplelog-0.11. 
* gnu/packages/crates-io.scm (rust-simplelog-0.11): New variable.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
 2022-01-22 13:09:20 +01:00
Aleksandr Vityazev
b2015eba10
gnu: Add rust-paris-1. 
* gnu/packages/crates-io.scm (rust-paris-1): New variable.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
 2022-01-22 13:09:20 +01:00
Marius Bakke
d07a89d645
gnu: Remove python-flask-script. 
This package is not compatible with current versions of Flask and has been
obsoleted upstream.

* gnu/packages/python-web.scm (python-flask-script): Remove variable.
 2022-01-22 12:42:48 +01:00
Marius Bakke
74f3815098
gnu: python-flask-migrate: Update to 3.1.0. 
* gnu/packages/python-web.scm (python-flask-migrate): Update to 3.1.0.
[source]: Change to GIT-FETCH.
[propagated-inputs]: Remove PYTHON-SCRIPT and PYTHON-SQLALCHEMY.
 2022-01-22 12:42:47 +01:00
Marius Bakke
e92961a687
gnu: Remove python-typing. 
* gnu/packages/python-xyz.scm (python-typing): Merge with ...
(python2-typing): ... this variable.
 2022-01-22 12:42:47 +01:00
Marius Bakke
db501204f3
gnu: python-fs: Remove unused input. 
* gnu/packages/python-xyz.scm (python-fs)[propagated-inputs]: Remove
PYTHON-TYPING.
 2022-01-22 12:42:47 +01:00
Marius Bakke
9604bea0ca
gnu: Remove python2-tqdm. 
* gnu/packages/python-xyz.scm (python2-tqdm): Remove variable.
 2022-01-22 12:42:47 +01:00
Marius Bakke
b084ab813a
gnu: Remove python2-nltk. 
* gnu/packages/python-xyz.scm (python2-nltk): Remove variable.
 2022-01-22 12:42:47 +01:00
Marius Bakke
7ff27f1dde
gnu: python-flufl-bounce: Update to 4.0. 
* gnu/packages/python-xyz.scm (python-flufl-bounce): Update to 4.0.
[arguments]: Replace check phase.
[native-inputs]: Add PYTHON-FLUFL-TESTING.
 2022-01-22 12:42:47 +01:00
Marius Bakke
97176b4d9c
gnu: python-sphinx-autobuild: Update to 2021.3.14. 
* gnu/packages/sphinx.scm (python-sphinx-autobuild): Update to 2021.3.14.
[arguments]: Remove obsolete phase.  Simplify check override.
[propagated-inputs]: Remove PYTHON-ARGH, PYTHON-PATHTOOLS, PYTHON-PORT-FOR,
PYTHON-PYYAML, PYTHON-TORNADO and PYTHON-WATCHDOG.  Add PYTHON-COLORAMA and
PYTHON-SPHINX.
 2022-01-22 10:23:02 +01:00
Marius Bakke
43c11056d2
gnu: python-watchdog: Remove unused input. 
* gnu/packages/python-xyz.scm (python-watchdog)[propagated-inputs]: Remove
PYTHON-ARGH.
 2022-01-22 10:23:02 +01:00
Marius Bakke
515854b31f
gnu: python-flask-oidc: Update to 1.4.0. 
* gnu/packages/python-web.scm (python-flask-oidc): Update to 1.4.0.
[arguments]: Override check phase.
 2022-01-22 10:23:01 +01:00
Marius Bakke
ed9ca97409
gnu: cwltool: Update to 3.1.20220119140128. 
* gnu/packages/bioinformatics.scm (cwltool): Update to 3.1.20220119140128.
[propagated-inputs]: Change from PYTHON-RDFLIB-5 to PYTHON-RDFLIB.
[native-inputs]: Remove PYTHON-RDFLIB-JSONLD.
 2022-01-22 10:23:01 +01:00
Marius Bakke
c940b0e38e
gnu: behave: Update to 1.2.7.dev2. 
* gnu/packages/check.scm (behave): Update to 1.2.7.dev2.
[source]: Switch to GIT-FETCH.  Remove patches.
[arguments]: Remove #:test-target.  Add #:phases.
[propagated-inputs]: Add PYTHON-COLORAMA and PYTHON-CUCUMBER-TAG-EXPRESSIONS.
* gnu/packages/patches/behave-skip-a-couple-of-tests.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
 2022-01-22 10:23:01 +01:00
Marius Bakke
22acec0588
gnu: Add python-cucumber-tag-expressions. 
* gnu/packages/python-check.scm (python-cucumber-tag-expressions): New variable.
 2022-01-22 10:23:01 +01:00
Marius Bakke
36481d00de
gnu: Add python-pytest-metadata. 
* gnu/packages/python-check.scm (python-pytest-metadata): New variable.
 2022-01-22 10:23:01 +01:00
Marius Bakke
af473726b2
gnu: python-pyvcf: Build with old setuptools. 
* gnu/packages/bioinformatics.scm (python-pyvcf)[native-inputs]: Add
PYTHON-SETUPTOOLS.
 2022-01-22 10:23:01 +01:00
Marius Bakke
404447b742
gnu: Deprecate python-flask-restplus. 
* gnu/packages/python-web.scm (python-flask-restplus): Define as deprecated
alias for PYTHON-FLASK-RESTX, as noted on its home page.
 2022-01-22 10:23:01 +01:00
Marius Bakke
b08151049d
gnu: python-sqlalchemy: Update to 1.4.31. 
* gnu/packages/databases.scm (python-sqlalchemy): Update to 1.4.31.
 2022-01-22 10:23:01 +01:00
Marius Bakke
9ebf6c21af
gnu: python-flask-session: Update to 0.4.0. 
* gnu/packages/python-web.scm (python-flask-session): Update to 0.4.0.
 2022-01-22 10:23:01 +01:00
Marius Bakke
443b8f2908
gnu: python-flask: Update to 2.0.2. 
* gnu/packages/python-web.scm (python-flask): Update to 2.0.2.
 2022-01-22 10:23:01 +01:00
Marius Bakke
45cb47c4d3
gnu: python-werkzeug: Update to 2.0.2. 
* gnu/packages/python-web.scm (python-werkzeug): Update to 2.0.2.
 2022-01-22 10:23:01 +01:00
Marius Bakke
038c65b380
gnu: python-louvain: Build with older setuptools. 
* gnu/packages/graph.scm (python-louvain)[native-inputs]: Add
PYTHON-SETUPTOOLS.
 2022-01-22 10:23:01 +01:00
Marius Bakke
9f57352e12
gnu: python-tqdm: Update to 4.62.3. 
* gnu/packages/python-xyz.scm (python-tqdm): Update to 4.62.3.
 2022-01-22 10:23:00 +01:00
Marius Bakke
b2faad4bd0
gnu: python-upsetplot: Update to 0.6.0. 
* gnu/packages/python-science.scm (python-upsetplot): Update to 0.6.0.
[source](modules, snippet): New fields.
[arguments]: Remove obsolete phase.  Respect TESTS? in check phase.
 2022-01-22 10:23:00 +01:00
Marius Bakke
4f6cbc0aee
gnu: python-pandas: Remove old version. 
* gnu/packages/python-science.scm (python-pandas-0.25): Remove variable.
(python2-pandas): Inherit from PYTHON-PANDAS.
 2022-01-22 10:23:00 +01:00
Marius Bakke
5ec4129907
gnu: Add python-psycopg. 
* gnu/packages/databases.scm (python-psycopg): New variable.
 2022-01-22 10:23:00 +01:00
Marius Bakke
84bcda58fc
gnu: Add python-psycopg-pool. 
* gnu/packages/databases.scm (python-psycopg-pool): New variable.
 2022-01-22 10:23:00 +01:00
Marius Bakke
8830d9f900
gnu: python-pytest-asyncio: Update to 0.17.2. 
* gnu/packages/check.scm (python-pytest-asyncio): Update to 0.17.2.
[arguments]: Specify setuptools-scm version.  Replace check phase.
[native-inputs]: Remove PYTHON-COVERAGE.  Add PYTHON-FLAKY and
PYTHON-SETUPTOOLS-SCM.
* gnu/packages/python-xyz.scm (python-tqdm, python-watchgod)[arguments]:
Specify asyncio_mode when running tests.
 2022-01-22 10:23:00 +01:00
Marius Bakke
b62737097c
gnu: python-pytest-mock: Cope with test warnings. 
* gnu/packages/check.scm (python-pytest-mock)[source](modules, snippet): New
fields.
[arguments]: Increase test verbosity and remove obsolete workaround.
 2022-01-22 10:23:00 +01:00