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Author SHA1 Message Date
Ricardo Wurmus
0548660420
gnu: Add r-compare. 
* gnu/packages/cran.scm (r-compare): New variable.
 2017-08-17 17:26:08 +02:00
Ricardo Wurmus
eb60149eee
gnu: Add r-png. 
* gnu/packages/image.scm (r-png): New variable.
 2017-08-17 17:26:08 +02:00
Ricardo Wurmus
5cc79c9c50
gnu: Add r-powerlaw. 
* gnu/packages/cran.scm (r-powerlaw): New variable.
 2017-08-17 17:25:47 +02:00
Ricardo Wurmus
2856369fad
gnu: Add r-circlize. 
* gnu/packages/cran.scm (r-circlize): New variable.
 2017-08-17 17:25:47 +02:00
Ricardo Wurmus
4847a62ea9
gnu: Add r-globaloptions. 
* gnu/packages/cran.scm (r-globaloptions): New variable.
 2017-08-17 17:25:47 +02:00
Ricardo Wurmus
2bdb5c3f78
gnu: Add r-shape. 
* gnu/packages/cran.scm (r-shape): New variable.
 2017-08-17 17:25:47 +02:00
Ricardo Wurmus
c69d27db57
gnu: Add r-calibrate. 
* gnu/packages/cran.scm (r-calibrate): New variable.
 2017-08-17 17:25:47 +02:00
Ricardo Wurmus
33ce12e293
gnu: Add r-auc. 
* gnu/packages/cran.scm (r-auc): New variable.
 2017-08-17 17:25:47 +02:00
Ricardo Wurmus
4a007ffafe
gnu: Add r-annotationhub. 
* gnu/packages/bioinformatics.scm (r-annotationhub): New variable.
 2017-08-17 17:25:47 +02:00
Ricardo Wurmus
5f96f30f5d
gnu: Add r-interactivedisplaybase. 
* gnu/packages/bioinformatics.scm (r-interactivedisplaybase): New variable.
 2017-08-17 17:25:46 +02:00
Efraim Flashner
a71fd67175
gnu: american-fuzzy-lop: Update to 2.49b. 
* gnu/packages/debug.scm (american-fuzzy-lop): Update to 2.49b.
 2017-08-17 18:17:00 +03:00
Efraim Flashner
aacefef222
gnu: american-fuzzy-lop: Add support for non-Intel architectures. 
* gnu/packages/debug.scm (americal-fuzzy-lop): Add qemu target for
non-Intel targets.
[arguments]: On non-Intel systems, add phase to disable non-Intel
architecture warning and remove incompatible binaries.
 2017-08-17 18:16:57 +03:00
Nicolas Goaziou
721e1987d0
gnu: Add mgba. 
* gnu/packages/games.scm (mgba): New public variable.
 2017-08-17 10:56:04 +02:00
Ricardo Wurmus
a6d05444ab
gnu: cuirass: Update to 0.0.1-7.6f85bc0. 
* gnu/packages/ci.scm (cuirass): Update to 0.0.1-7.6f85bc0.
[arguments]: Add guile-git and guile-bytestructures to the load path.
[inputs]: Remove git, add guile-git and guile-bytestructures.
 2017-08-17 09:12:46 +02:00
Efraim Flashner
e3b861ce38
gnu: python-cython: Update to 0.26. 
* gnu/packages/python.scm (python-cython, python2-cython): Update to 0.26.
[source]: Remove patch.
* gnu/packages/patches/python-cython-fix-tests-32bit.patch: Remove file.
* gnu/local.mk (dist_patch_DATA): Remove it.
 2017-08-17 06:46:06 +03:00
Danny Milosavljevic
d6ef422fe7
gnu: Add fbreader. 
* gnu/packages/ebook.scm (fbreader): New variable.
 2017-08-17 02:00:51 +02:00
Danny Milosavljevic
84a52639c9
gnu: Add liblinebreak. 
* gnu/packages/ebook.scm (liblinebreak): New variable.
 2017-08-17 01:56:38 +02:00
Tobias Geerinckx-Rice
f73f1f0769
gnu: python-cryptography-vectors: Update to 2.0.3. 
* gnu/packages/python.scm (python-cryptography-vectors): Update to 2.0.3.
 2017-08-16 22:35:11 +02:00
Tobias Geerinckx-Rice
f37995fa20
gnu: python-cryptography: Update to 2.0.3. 
* gnu/packages/python.scm (python-cryptography): Update to 2.0.3.
 2017-08-16 22:35:10 +02:00
Tobias Geerinckx-Rice
f886e7cab1
gnu: limnoria: Update to 2017.08.03. 
* gnu/packages/irc.scm (limnoria): Update to 2017.08.03.
 2017-08-16 22:35:10 +02:00
Tobias Geerinckx-Rice
e2a4c13023
gnu: cbatticon: Update to 1.6.6. 
* gnu/packages/admin.scm (cbatticon): Update to 1.6.6.
 2017-08-16 22:35:10 +02:00
Julien Lepiller
f207984985
gnu: Add gpick. 
* gnu/packages/image.scm (gpick): New variable.
 2017-08-16 21:37:33 +03:00
ng0
d0b13d7b9b
gnu: fossil: Update to 2.2. 
* gnu/packages/version-control.scm (fossil): Update to 2.2.
[source]: Add uri for older versions.
[arguments]: Enable previously disabled test.
 2017-08-16 21:37:32 +03:00
Efraim Flashner
ab1bd285db
gnu: connman: Update to 1.35. 
* gnu/packages/connman.scm (connman): Update to 1.35.
 2017-08-16 21:37:29 +03:00
Kei Kebreau
e664200c0c
gnu: Add ltris. 
* gnu/packages/games.scm (ltris): New variable.
 2017-08-16 11:28:12 -04:00
Alex Vong
af4db693db
gnu: Add ghc-gitrev. 
* gnu/packages/haskell.scm (ghc-gitrev): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2017-08-16 17:07:39 +02:00
Alex Vong
e0ca14c7a8
gnu: Add ghc-geniplate-mirror. 
* gnu/packages/haskell.scm (ghc-geniplate-mirror): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2017-08-16 17:07:39 +02:00
Alex Vong
298af2a8da
gnu: Add ghc-monadplus. 
* gnu/packages/haskell.scm (ghc-monadplus): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2017-08-16 17:07:39 +02:00
Alex Vong
005a08e3dc
gnu: Add ghc-fail. 
* gnu/packages/haskell.scm (ghc-fail): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2017-08-16 17:07:39 +02:00
Alex Vong
1eced2a7a8
gnu: Add ghc-edisoncore. 
* gnu/packages/haskell.scm (ghc-edisoncore): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2017-08-16 17:07:39 +02:00
Alex Vong
212ae09541
gnu: Add ghc-edisonapi. 
* gnu/packages/haskell.scm (ghc-edisonapi): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2017-08-16 17:07:39 +02:00
Alex Vong
a623fd7fed
gnu: Add ghc-murmur-hash. 
* gnu/packages/haskell.scm (ghc-murmur-hash): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2017-08-16 17:07:38 +02:00
Alex Vong
ca48a34594
gnu: Add ghc-data-hash. 
* gnu/packages/haskell.scm (ghc-data-hash): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2017-08-16 17:07:38 +02:00
Efraim Flashner
adcb30642c
gnu: pspp: Update to 0.11.0. 
This fixes CVE-2017-10791, CVE-2017-10792.

* gnu/packages/statistics.scm (pspp): Update to 0.11.0.
 2017-08-16 17:57:40 +03:00
Alex Vong
96f23b62e0
gnu: Add ghc-equivalence. 
* gnu/packages/haskell.scm (ghc-equivalence): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2017-08-16 16:53:13 +02:00
Alex Vong
3f8b8e731c
gnu: Add ghc-boxes. 
* gnu/packages/haskell.scm (ghc-boxes): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2017-08-16 16:53:13 +02:00
Alex Vong
be04f8020a
gnu: Add ghc-edit-distance. 
* gnu/packages/haskell.scm (ghc-edit-distance): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2017-08-16 16:53:13 +02:00
Alex Vong
867ed9776c
gnu: Add ghc-stmonadtrans. 
* gnu/packages/haskell.scm (ghc-stmonadtrans): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2017-08-16 16:53:12 +02:00
Alex Vong
f99a57dc28
gnu: Add ghc-strict. 
* gnu/packages/haskell.scm (ghc-strict): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2017-08-16 16:53:12 +02:00
Alex Vong
c12562e1e8
gnu: cpphs: Update to 1.20.8. 
* gnu/packages/haskell.scm (cpphs): Update to 1.20.8.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2017-08-16 16:53:08 +02:00
ng0
2f7966c8e2
gnu: font-google-noto: Use font-build-system. 
* gnu/packages/fonts.scm (font-google-noto)[build-system]: Use
font-build-system.
[source]: Use url-fetch/zipbomb.
[arguments]: Remove it.
[native-inputs]: Remove it.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2017-08-16 16:18:50 +02:00
Efraim Flashner
d534f3a4d3
gnu: r-mzr: Fix building on aarch64 and armhf. 
* gnu/packages/bioinformatics.scm (r-mzr)[inputs]: Add boost.
 2017-08-16 12:36:25 +03:00
Efraim Flashner
953a12fa9b
gnu: hdf4: Fix building on aarch64. 
* gnu/packages/maths.scm (hdf4)[arguments]: Add a phase to improve
detection and support for aarch64-linux.
 2017-08-16 09:33:11 +03:00
Leo Famulari
8343d373d5
gnu: cgit: Don't build cgit's special 'git:src' input. 
This special version of Git is only used within the build process of
cgit. We don't need to build it otherwise, so the package is removed
with this commit.

* gnu/packages/version-control.scm (cgit)[inputs]: Replace the git@2.10
package with an origin reference of the source code.
(git@2.10): Remove variable.
 2017-08-15 17:59:22 -04:00
Christopher Baines
6230e155af
gnu: Fix memcached service startup. 
Memcached changes to the memcached user from root before writing the PID
file. This means that it must be able to write the PID file as the memcached
user.

To make this work, create the /var/run/memcached directory when the service
starts, make it owned by memcached, and change memcached to write the PID file
to /var/run/memcached/pid.

This wasn't picked up by the system test as the "service running" part was too
permissive, and only failed on an error. Instead, test the response from
calling start-service and check that the PID is a number.

* gnu/services/databases.scm (memcached-activation): New variable.
  (memcached-shepherd-service): Change PID file location.
  (memcached-service-type): Extend the activation-service-type.
* gnu/tests/databases.scm (run-memcached-test)[test]: Change the "service
  running" test to check the response from the shepherd.
 2017-08-15 22:24:15 +01:00
Danny Milosavljevic
2434f5cedf
gnu: Add dssi. 
* gnu/packages/music.scm (dssi): New variable.
 2017-08-15 20:58:03 +02:00
Oleg Pykhalov
425d66f7a7
gnu: Add emacs-highlight-symbol. 
* gnu/packages/emacs.scm (emacs-highlight-symbol): New variable.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
 2017-08-15 20:52:58 +02:00
ng0
be69176bbd
gnu: fish-guix: Use new download URL. 
* gnu/packages/shells.scm (fish-guix)[source]: Adjust the download URL.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
 2017-08-15 20:41:23 +02:00
Marius Bakke
dca82aefbc
gnu: p11-kit: Update to 0.23.8. 
* gnu/packages/tls.scm (p11-kit): Update to 0.23.8.
 2017-08-15 20:38:02 +02:00
Leo Famulari
6550e5ad64
gnu: signify: Update to 22. 
* gnu/packages/crypto.scm (signify): Update to 22.
 2017-08-15 13:27:30 -04:00
Ben Woodcroft
06f31e50b1
gnu: diamond: Update to 0.9.10. 
* gnu/packages/bioinformatics.scm (diamond): Update to 0.9.10.
 2017-08-15 18:49:33 +10:00
Efraim Flashner
3837108e40
gnu: bcftools: Fix building on aarch64. 
* gnu/packages/patches/bcftools-regidx-unsigned-char.patch: New file.
* gnu/packages/bioinformatics.scm (bcftools)[source]: Use it.
* gnu/local.mk (dist_patch_DATA): Register it.
 2017-08-15 10:31:20 +03:00
Efraim Flashner
2d430f2923
Revert "gnu: pspp: Update to 0.11.0." 
This FTBFS on x86_64 and i686.

This reverts commit f4c808df5b.
 2017-08-15 10:03:40 +03:00
Tobias Geerinckx-Rice
14f366e58d
gnu: youtube-dl: Update to 2017.08.13. 
* gnu/packages/video.scm (youtube-dl): Update to 2017.08.13.
 2017-08-15 01:42:49 +02:00
Marius Bakke
f28fea1ca7
gnu: e2fsprogs: Update to 1.43.5. 
* gnu/packages/patches/e2fsprogs-32bit-quota-warnings.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
* gnu/packages/linux.scm (e2fsprogs): Update to 1.43.5.
[source]: Use patch.
 2017-08-15 01:08:01 +02:00
Leo Famulari
15428168ea
gnu: cvs: Fix CVE-2017-12836. 
* gnu/packages/patches/cvs-2017-12836.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/version-control.scm (cvs)[source]: Use it.
 2017-08-14 15:55:31 -04:00
Marius Bakke
36bfcf7e3a
gnu: git@2.10: Update to 2.10.4 [fixes CVE-2017-1000117]. 
...also disable tests, since they broke after c9f4f56b24.

* gnu/packages/version-control.scm (git@2.10): Update to 2.10.4.
[arguments]: New field.
 2017-08-14 21:44:24 +02:00
Efraim Flashner
2bccf1c0ec
gnu: gcc@7: Update to 7.2.0. 
* gnu/packages/gcc.scm (gcc@7): Update to 7.2.0.
[source]: Switch to xz compression.
 2017-08-14 22:30:07 +03:00
Marius Bakke
a547a6d560
Revert "gnu: e2fsprogs: Update to 1.43.5." 
Fails to build on i686:
<https://lists.gnu.org/archive/html/guix-devel/2017-08/msg00118.html>

This reverts commit 3ddaa7922b.
 2017-08-14 21:22:12 +02:00
Kei Kebreau
1faf081b47
gnu: milkytracker: Update to 1.01.00. 
* gnu/packages/music.scm (milkytracker): Update to 1.01.00.
 2017-08-14 14:26:15 -04:00
Ricardo Wurmus
9634804890
gnu: Add bismark. 
* gnu/packages/bioinformatics.scm (bismark): New variable.
 2017-08-14 12:00:56 +02:00
Ricardo Wurmus
86763fdd70
gnu: Add r-dexseq. 
* gnu/packages/bioinformatics.scm (r-dexseq): New variable.
 2017-08-14 12:00:51 +02:00
Ricardo Wurmus
233f4f43bf
gnu: Add perl-math-random-secure. 
* gnu/packages/crypto.scm (perl-math-random-secure): New variable.
 2017-08-14 11:50:42 +02:00
Ricardo Wurmus
2023b79f59
gnu: Add perl-crypt-random-source. 
* gnu/packages/crypto.scm (perl-crypt-random-source): New variable.
 2017-08-14 11:50:13 +02:00
Ricardo Wurmus
2bdc07c2a5
gnu: Add perl-type-tiny. 
* gnu/packages/perl.scm (perl-type-tiny): New variable.
 2017-08-14 11:46:23 +02:00
Ricardo Wurmus
a0eb3104a9
gnu: Add perl-ref-util-xs. 
* gnu/packages/perl.scm (perl-ref-util-xs): New variable.
 2017-08-14 11:46:14 +02:00
Ricardo Wurmus
44d37e43fe
gnu: Add perl-regexp-util. 
* gnu/packages/perl.scm (perl-regexp-util): New variable.
 2017-08-14 11:46:04 +02:00
Ricardo Wurmus
413dd21084
gnu: Add perl-type-tie. 
* gnu/packages/perl.scm (perl-type-tie): New variable.
 2017-08-14 11:45:56 +02:00
Ricardo Wurmus
649238cbc7
gnu: Add perl-math-random-isaac. 
* gnu/packages/crypto.scm (perl-math-random-isaac): New variable.
 2017-08-14 11:45:20 +02:00
Ricardo Wurmus
d96e162aa9
gnu: Add perl-math-random-isaac-xs. 
* gnu/packages/crypto.scm (perl-math-random-isaac-xs): New variable.
 2017-08-14 11:44:15 +02:00
Ricardo Wurmus
2fa2179135
gnu: Add perl-hash-fieldhash. 
* gnu/packages/perl.scm (perl-hash-fieldhash): New variable.
 2017-08-14 11:37:08 +02:00
Arun Isaac
28fd275caf
gnu: arandr: Use absolute path for xrandr. 
* gnu/packages/xdisorg.scm (arandr)[arguments]: Add configure phase.
 2017-08-14 10:01:40 +02:00
Mark H Weaver
9031d26aeb
gnu: linux-libre: Update to 4.12.7. 
* gnu/packages/linux.scm (%linux-libre-version): Update to 4.12.7.
(%linux-libre-hash): Update hash.
 2017-08-14 03:33:09 -04:00
Mark H Weaver
e96b4378a2
gnu: linux-libre@4.9: Update to 4.9.43. 
* gnu/packages/linux.scm (linux-libre-4.9): Update to 4.9.43.
 2017-08-14 03:32:26 -04:00
Mark H Weaver
7aee6a311b
gnu: linux-libre@4.4: Update to 4.4.82. 
* gnu/packages/linux.scm (linux-libre-4.4): Update to 4.4.82.
 2017-08-14 03:31:29 -04:00
Andy Wingo
3bfa7af417
gnu: libreoffice: Install .desktop files. 
* gnu/packages/libreoffice.scm (libreoffice): Add phase to install .desktop
files to $out/share so that LibreOffice will show up in Gnome/KDE/etc and so
that it is associated with the various MIME types of interest.
 2017-08-14 09:11:22 +02:00
Kei Kebreau
ac2ddcc66f
gnu: wxmaxima: Update to 17.05.1. 
* gnu/packages/maths.scm (wxmaxima): Update to 17.05.1.
[arguments]: Put "autoconf" phase after the "unpack" phase. Fix
indentation.
 2017-08-13 18:18:27 -04:00
ng0
be6e2c3018
gnu: Update open-adventure to d43854f0f6bb8e9eea7fbce80348150e7e7fc34d. 
* gnu/packages/games.scm (open-adventure): Update to
d43854f0f6bb8e9eea7fbce80348150e7e7fc34d.

Signed-off-by: Kei Kebreau <kei@openmailbox.org>
 2017-08-13 15:39:47 -04:00
ng0
05af41a181
gnu: linenoise: Update to commit 2105ce445821381cf1bca87b6d386d4ea88ee20d. 
* gnu/packages/shells.scm (linenoise): Update to commit
2105ce445821381cf1bca87b6d386d4ea88ee20d. Fix indentation.
[source]: change to git.

Signed-off-by: Kei Kebreau <kei@openmailbox.org>
 2017-08-13 15:29:45 -04:00
Alex Vong
f152208b0d
gnu: qemu: Fix CVE-2017-{10664,10806,10911,11434}. 
* gnu/packages/patches/qemu-CVE-2017-10664.patch,
gnu/packages/patches/qemu-CVE-2017-10806.patch,
gnu/packages/patches/qemu-CVE-2017-10911.patch,
gnu/packages/patches/qemu-CVE-2017-11434.patch: New files.
* gnu/local.mk (dist_patch_DATA): Add them.
* gnu/packages/virtualization.scm (qemu)[source]: Use them.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
 2017-08-13 18:28:27 +02:00
Marius Bakke
d5daf6fbe0
gnu: curl: Fix i686 test failure. 
* gnu/packages/patches/curl-bounds-check.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
* gnu/packages/curl.scm (curl-7.55.0)[source]: Use it.
 2017-08-13 16:46:41 +02:00
Marius Bakke
9766082045
gnu: imagemagick: Update to 6.9.9-7. 
* gnu/packages/imagemagick.scm (imagemagick): Update to 6.9.9-7.
 2017-08-13 15:14:03 +02:00
Oleg Pykhalov
f7e8302b4e
gnu: Add emacs-nix-mode. 
* gnu/packages/emacs.scm (emacs-nix-mode): New variable.

Signed-off-by: Arun Isaac <arunisaac@systemreboot.net>
 2017-08-13 13:20:30 +05:30
Efraim Flashner
f4c808df5b
gnu: pspp: Update to 0.11.0. 
This fixes CVE-2017-10791, CVE-2017-10792.

* gnu/packages/statistics.scm (pspp): Update to 0.11.0.
 2017-08-13 10:16:17 +03:00
Peter Mikkelsen
06465d2ba4
gnu: Add mpd service. 
* doc/guix.texi: Add documentation.
* gnu/services/audio.scm (<mpd-configuration>): New record type.
  (mpd-service-type): New service type.
* gnu/tests/audio.scm: New file.
* gnu/local.mk: Add new files.

Signed-off-by: Christopher Baines <mail@cbaines.net>
 2017-08-13 07:36:32 +01:00
Christopher Baines
c0761f2e7e
gnu: moreutils: Add more inputs to moreutils. 
The included ts command requires the Time::Duration and Date::Parse perl
modules for the -r option.

* gnu/packages/moreutils.scm (moreutils)[inputs]: Add perl-timedate and
  perl-time-duration.
  [arguments]: Wrap ts with PERL5LIB.
 2017-08-12 22:09:50 +01:00
Efraim Flashner
861fd04baf
gnu: efl: Don't include gtk+@3 in enclosure. 
* gnu/packages/enlightenment.scm (efl)[propagated-inputs]: Replace
libinput with libinput-minimal.
 2017-08-12 23:10:38 +03:00
Efraim Flashner
9be481f8b9
gnu: efl: Update to 1.20.2. 
* gnu/packages/enlightenment.scm (efl): Update to 1.20.2.
 2017-08-12 23:10:36 +03:00
Mark H Weaver
f814379463
gnu: linux-libre: Update to 4.12.6. 
* gnu/packages/linux.scm (%linux-libre-version): Update to 4.12.6.
(%linux-libre-hash): Update hash.
 2017-08-12 15:52:29 -04:00
Mark H Weaver
5a8fc7de66
gnu: linux-libre@4.9: Update to 4.9.42. 
* gnu/packages/linux.scm (linux-libre-4.9): Update to 4.9.42.
 2017-08-12 15:51:47 -04:00
Mark H Weaver
7d7c84a7bf
gnu: linux-libre@4.4: Update to 4.4.81. 
* gnu/packages/linux.scm (linux-libre-4.4): Update to 4.4.81.
 2017-08-12 15:51:00 -04:00
Danny Milosavljevic
462ae6f612
gnu: python-pylint: Use Python2 variant system. 
* gnu/packages/python.scm (python-pylint): Use Python2 variant system.
(python2-pylint): Strip Python2 variant system.
 2017-08-12 16:30:16 +02:00
Alex Vong
bfcdf88760
gnu: catdoc: Fix CVE-2017-11110. 
* gnu/packages/patches/catdoc-CVE-2017-11110.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/textutils.scm (catdoc)[source]: Use it.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
 2017-08-12 15:30:23 +02:00
Marius Bakke
3ddaa7922b
gnu: e2fsprogs: Update to 1.43.5. 
* gnu/packages/linux.scm (e2fsprogs): Update to 1.43.5.
 2017-08-12 14:07:41 +02:00
Marius Bakke
f1f2da6bce
gnu: feh: Update to 2.19.2. 
* gnu/packages/image-viewers.scm (feh): Update to 2.19.2.
 2017-08-12 13:59:14 +02:00
Tobias Geerinckx-Rice
3f09b46d93
gnu: dub: Update to 1.4.1. 
* gnu/packages/ldc.scm (dub): Update to 1.4.1.
 2017-08-11 16:46:00 +02:00
Andy Wingo
f7fc9667b2
gnu: Add cloc. 
* gnu/packages/code.scm (cloc): New public variable.
 2017-08-11 10:38:30 +02:00
Leo Famulari
d373c16f33
gnu: imagemagick: Update to 6.9.9-5. 
* gnu/packages/imagemagick.scm (imagemagick): Update to 6.9.9-5.
 2017-08-10 20:12:47 -04:00
Tobias Geerinckx-Rice
1c865bfce5
gnu: mksh: Update to 56. 
* gnu/packages/shells.scm (mksh): Update to 56.
 2017-08-11 01:02:12 +02:00
Tobias Geerinckx-Rice
eec0c587af
gnu: ruby-debug-inspector: Update to 0.0.3. 
* gnu/packages/ruby.scm (ruby-debug-inspector): Update to 0.0.3.
 2017-08-11 00:21:00 +02:00
Tobias Geerinckx-Rice
c3b36fa161
gnu: ruby-listen: Update to 3.1.5. 
* gnu/packages/ruby.scm (ruby-listen): Update to 3.1.5.
 2017-08-11 00:20:59 +02:00
Tobias Geerinckx-Rice
98ff58a53d
gnu: ruby-introspection: Update to 0.0.4. 
* gnu/packages/ruby.scm (ruby-introspection): Update to 0.0.4.
 2017-08-11 00:20:59 +02:00
Tobias Geerinckx-Rice
a88f24d860
gnu: ruby-simplecov-html: Update to 0.10.1. 
* gnu/packages/ruby.scm (ruby-simplecov-html): Update to 0.10.1.
 2017-08-11 00:20:58 +02:00
Tobias Geerinckx-Rice
ba074a85d0
gnu: ruby-net-http-digest-auth: Update to 1.4.1. 
* gnu/packages/ruby.scm (ruby-net-http-digest-auth): Update to 1.4.1.
 2017-08-11 00:20:57 +02:00
Tobias Geerinckx-Rice
12313cd071
gnu: ruby-nenv: Update to 0.3.0. 
* gnu/packages/ruby.scm (ruby-nenv): Update to 0.3.0.
 2017-08-11 00:20:57 +02:00
Tobias Geerinckx-Rice
aeb4e61e75
gnu: ruby-rjb: Update to 1.5.5. 
* gnu/packages/ruby.scm (ruby-rjb): Update to 1.5.5.
 2017-08-11 00:20:56 +02:00
Tobias Geerinckx-Rice
acbc506218
gnu: ruby-libxml: Update to 3.0.0. 
* gnu/packages/ruby.scm (ruby-libxml): Update to 3.0.0.
 2017-08-11 00:20:55 +02:00
Tobias Geerinckx-Rice
6f9652b0a1
gnu: ruby-minitest-bacon: Update to 1.0.3. 
* gnu/packages/ruby.scm (ruby-minitest-bacon): Update to 1.0.3.
 2017-08-11 00:20:55 +02:00
Tobias Geerinckx-Rice
fbefd6ffbf
gnu: ruby-tins: Update to 1.15.0. 
* gnu/packages/ruby.scm (ruby-tins): Update to 1.15.0.
 2017-08-11 00:20:54 +02:00
Tobias Geerinckx-Rice
ceaff59ec7
gnu: ruby-git: Update to 1.3.0. 
* gnu/packages/ruby.scm (ruby-git): Update to 1.3.0.
 2017-08-11 00:20:53 +02:00
Tobias Geerinckx-Rice
c9e261b7eb
gnu: ruby-minitest-bonus-assertions: Update to 3.0. 
* gnu/packages/ruby.scm (ruby-minitest-bonus-assertions): Update to 3.0.
 2017-08-11 00:20:52 +02:00
Tobias Geerinckx-Rice
d21c6686d0
gnu: ruby-minitest-hooks: Update to 1.4.1. 
* gnu/packages/ruby.scm (ruby-minitest-hooks): Update to 1.4.1.
 2017-08-11 00:20:52 +02:00
Tobias Geerinckx-Rice
d74d96e466
gnu: ruby-test-unit: Update to 3.2.5. 
* gnu/packages/ruby.scm (ruby-test-unit): Update to 3.2.5.
 2017-08-11 00:20:51 +02:00
Tobias Geerinckx-Rice
2e8cd8624d
gnu: ruby-thor: Update to 0.19.4. 
* gnu/packages/ruby.scm (ruby-thor): Update to 0.19.4.
 2017-08-11 00:20:50 +02:00
Tobias Geerinckx-Rice
1d60c436aa
gnu: ruby-packnga: Update to 1.0.4. 
* gnu/packages/ruby.scm (ruby-packnga): Update to 1.0.4.
 2017-08-11 00:20:50 +02:00
Tobias Geerinckx-Rice
e32dfb7405
gnu: ruby-lumberjack: Update to 1.0.12. 
* gnu/packages/ruby.scm (ruby-lumberjack): Update to 1.0.12.
 2017-08-11 00:20:49 +02:00
Tobias Geerinckx-Rice
185ea4465d
gnu: ruby-net-http-persistent: Update to 3.0.0. 
* gnu/packages/ruby.scm (ruby-net-http-persistent): Update to 3.0.0.
 2017-08-11 00:20:48 +02:00
Tobias Geerinckx-Rice
04de0cb5a0
gnu: ruby-mail: Update to 2.6.6. 
* gnu/packages/ruby.scm (ruby-mail): Update to 2.6.6.
 2017-08-11 00:20:48 +02:00
Tobias Geerinckx-Rice
263c0dbf00
gnu: ruby-ox: Update to 2.6.0. 
* gnu/packages/ruby.scm (ruby-ox): Update to 2.6.0.
 2017-08-11 00:20:47 +02:00
Tobias Geerinckx-Rice
2a91494ed1
gnu: ruby-redcloth: Update to 4.3.2. 
* gnu/packages/ruby.scm (ruby-redcloth): Update to 4.3.2.
 2017-08-11 00:20:46 +02:00
Tobias Geerinckx-Rice
a3179a7338
gnu: ruby-connection-pool: Update to 2.2.1. 
* gnu/packages/ruby.scm (ruby-connection-pool): Update to 2.2.1.
 2017-08-11 00:20:46 +02:00
Tobias Geerinckx-Rice
56822223c1
gnu: ruby-fivemat: Update to 1.3.5. 
* gnu/packages/ruby.scm (ruby-fivemat): Update to 1.3.5.
 2017-08-11 00:20:45 +02:00
Tobias Geerinckx-Rice
8d10918a43
gnu: ruby-daemons: Update to 1.2.4. 
* gnu/packages/ruby.scm (ruby-daemons): Update to 1.2.4.
 2017-08-11 00:20:44 +02:00
Tobias Geerinckx-Rice
e2fcef3913
gnu: ruby-diff-lcs: Update to 1.3. 
* gnu/packages/ruby.scm (ruby-diff-lcs): Update to 1.3.
 2017-08-11 00:20:44 +02:00
Tobias Geerinckx-Rice
313dd5ddc0
gnu: ruby-thread-safe: Update to 0.3.6. 
* gnu/packages/ruby.scm (ruby-thread-safe): Update to 0.3.6.
 2017-08-11 00:20:43 +02:00
Tobias Geerinckx-Rice
884a80dd0a
gnu: ruby-pkg-config: Update to 1.2.5. 
* gnu/packages/ruby.scm (ruby-pkg-config): Update to 1.2.5.
 2017-08-11 00:20:43 +02:00
Tobias Geerinckx-Rice
30caad5080
gnu: ruby-eventmachine: Update to 1.2.5. 
* gnu/packages/ruby.scm (ruby-eventmachine): Update to 1.2.5.
 2017-08-11 00:20:42 +02:00
Tobias Geerinckx-Rice
f3a6311af4
gnu: ruby-term-ansicolor: Update to 1.6.0. 
* gnu/packages/ruby.scm (ruby-term-ansicolor): Update to 1.6.0.
 2017-08-11 00:20:41 +02:00
Tobias Geerinckx-Rice
0cd7b8164d
gnu: ruby-rake-compiler: Update to 1.0.4. 
* gnu/packages/ruby.scm (ruby-rake-compiler): Update to 1.0.4.
 2017-08-11 00:20:40 +02:00
Tobias Geerinckx-Rice
3b0e45c86d
gnu: ruby-useragent: Update to 0.16.8. 
* gnu/packages/ruby.scm (ruby-useragent): Update to 0.16.8.
 2017-08-11 00:20:40 +02:00
Tobias Geerinckx-Rice
5620bd456f
gnu: ruby-domain-name: Update to 0.5.20170404. 
* gnu/packages/ruby.scm (ruby-domain-name): Update to 0.5.20170404.
 2017-08-11 00:20:39 +02:00
Tobias Geerinckx-Rice
a7ca218cd5
gnu: ruby-notiffany: Update to 0.1.1. 
* gnu/packages/ruby.scm (ruby-notiffany): Update to 0.1.1.
 2017-08-11 00:20:39 +02:00
Tobias Geerinckx-Rice
d5489a618d
gnu: ruby-byebug: Update to 9.0.6. 
* gnu/packages/ruby.scm (ruby-byebug): Update to 9.0.6.
 2017-08-11 00:20:38 +02:00
Tobias Geerinckx-Rice
65a7f09ce0
gnu: ruby-sequel: Update to 4.49.0. 
* gnu/packages/ruby.scm (ruby-sequel): Update to 4.49.0.
 2017-08-11 00:20:38 +02:00
Tobias Geerinckx-Rice
d1c1f36803
gnu: ruby-shoulda-matchers: Update to 3.1.2. 
* gnu/packages/ruby.scm (ruby-shoulda-matchers): Update to 3.1.2.
 2017-08-11 00:20:37 +02:00
Tobias Geerinckx-Rice
8e5ff25042
gnu: ruby-arel: Update to 8.0.0. 
* gnu/packages/ruby.scm (ruby-arel): Update to 8.0.0.
 2017-08-11 00:20:37 +02:00
Tobias Geerinckx-Rice
56ccada3c1
gnu: ruby-rb-fsevent: Update to 0.10.2. 
* gnu/packages/ruby.scm (ruby-rb-fsevent): Update to 0.10.2.
 2017-08-11 00:20:36 +02:00
Tobias Geerinckx-Rice
cd698b6e20
gnu: ruby-utils: Update to 0.9.0. 
* gnu/packages/ruby.scm (ruby-utils): Update to 0.9.0.
 2017-08-11 00:20:35 +02:00
Tobias Geerinckx-Rice
e322222ab4
gnu: ruby-tzinfo: Update to 1.2.3. 
* gnu/packages/ruby.scm (ruby-tzinfo): Update to 1.2.3.
 2017-08-11 00:20:35 +02:00
Tobias Geerinckx-Rice
32bbfea811
gnu: ruby-rb-inotify: Update to 0.9.10. 
* gnu/packages/ruby.scm (ruby-rb-inotify): Update to 0.9.10.
 2017-08-11 00:20:34 +02:00
Tobias Geerinckx-Rice
8929f0a481
gnu: ruby-gherkin: Update to 4.1.3. 
* gnu/packages/ruby.scm (ruby-gherkin): Update to 4.1.3.
 2017-08-11 00:20:33 +02:00
Tobias Geerinckx-Rice
3d4a5eb555
gnu: ruby-timecop: Update to 0.9.1. 
* gnu/packages/ruby.scm (ruby-timecop): Update to 0.9.1.
 2017-08-11 00:20:33 +02:00
Tobias Geerinckx-Rice
483846ac6f
gnu: ruby-minitest: Update to 5.10.3. 
* gnu/packages/ruby.scm (ruby-minitest): Update to 5.10.3.
 2017-08-11 00:20:32 +02:00
Tobias Geerinckx-Rice
5ca48923f5
gnu: ruby-redcarpet: Update to 3.4.0. 
* gnu/packages/ruby.scm (ruby-redcarpet): Update to 3.4.0.
 2017-08-11 00:20:32 +02:00
Tobias Geerinckx-Rice
dc97df2ef4
gnu: ruby-cucumber-core: Update to 2.0.0. 
* gnu/packages/ruby.scm (ruby-cucumber-core): Update to 2.0.0.
 2017-08-11 00:20:31 +02:00
Tobias Geerinckx-Rice
ce5f523001
gnu: ruby-pg: Update to 0.21.0. 
* gnu/packages/ruby.scm (ruby-pg): Update to 0.21.0.
 2017-08-11 00:20:30 +02:00
Tobias Geerinckx-Rice
d14e5eaa19
gnu: ruby-slop: Update to 4.5.0. 
* gnu/packages/ruby.scm (ruby-slop): Update to 4.5.0.
 2017-08-11 00:20:29 +02:00
Marius Bakke
c2f93e9c07
gnu: openjpeg: Update to 2.2.0 [security fixes]. 
In addition to the patches we already had (which are not mentioned in the
ChangeLog, but verified by following their respective GitHub issues) this
release also fixes CVE-2016-9112, CVE-2016-5139, CVE-2016-5152, CVE-2016-5158,
CVE-2016-5159, CVE-2016-1626 and CVE-2016-1628.

See <https://github.com/uclouvain/openjpeg/blob/v2.2.0/CHANGELOG.md> for details.

* gnu/packages/patches/openjpeg-CVE-2016-9572-CVE-2016-9573.patch,
  gnu/packages/patches/openjpeg-CVE-2016-9850-CVE-2016-9851.patch: Delete files.
* gnu/local.mk (dist_patch_DATA): Remove them.
* gnu/packages/image.scm (openjpeg): Update to 2.2.0.
[source](patches): Remove.
* gnu/packages/gstreamer.scm (gst-plugins-bad)[arguments]: Add phase to patch
hard-coded openjpeg-2.1 path.
 2017-08-10 22:23:31 +02:00
Marius Bakke
1a1558e88f
gnu: postgresql: Update to 9.6.4 [fixes CVE-2017-{7546,7547,7548}]. 
See <https://www.postgresql.org/about/news/1772/> for more information.

* gnu/packages/databases.scm (postgresql): Update to 9.6.4.
 2017-08-10 22:23:31 +02:00
Leo Famulari
1e07daa27a
gnu: mercurial: Update to 4.2.3 [fixes CVE-2017-1000116]. 
* gnu/packages/version-control.scm (mercurial): Update to 4.2.3.
 2017-08-10 15:02:04 -04:00
Leo Famulari
38f8a882ab
gnu: git: Update to 2.14.1 [fixes CVE-2017-1000117]. 
* gnu/packages/version-control.scm (git): Update to 2.14.1.
 2017-08-10 15:02:04 -04:00
Leo Famulari
5993f7c455
gnu: subversion: Update to 1.8.19 [fixes CVE-2017-9800]. 
* gnu/packages/version-control.scm (subversion): Update to 1.8.19.
[source]: Add alternate URL.
 2017-08-10 15:02:04 -04:00
Oleg Pykhalov
f262f44683
gnu: Add emacs-engine-mode. 
* gnu/packages/emacs.scm (emacs-engine-mode): New variable.

Signed-off-by: Arun Isaac <arunisaac@systemreboot.net>
 2017-08-10 22:25:25 +05:30
Leo Famulari
783daa4982
gnu: libsoup: Update to 2.58.2 (fixes CVE-2017-2885). 
* gnu/packages/gnome.scm (libsoup): Update to 2.58.2.
 2017-08-10 12:25:31 -04:00
Tobias Geerinckx-Rice
ddde3f6be1
gnu: catimg: Update to 2.4.0. 
* gnu/packages/image-viewers.scm (catimg): Update to 2.4.0.
 2017-08-10 17:26:08 +02:00
Tobias Geerinckx-Rice
226685faa5
gnu: cppcheck: Update to 1.80. 
* gnu/packages/check.scm (cppcheck): Update to 1.80.
 2017-08-10 17:26:07 +02:00
Tobias Geerinckx-Rice
c63b83a40f
gnu: vdirsyncer: Update to 0.16.1. 
* gnu/packages/dav.scm (vdirsyncer): Update to 0.16.1.
 2017-08-10 17:26:07 +02:00
Ben Woodcroft
37b08547e4
gnu: ruby-bio-commandeer: Update to 0.4.0. 
* gnu/packages/ruby.scm (ruby-bio-commandeer): Update to 0.4.0.
 2017-08-10 22:20:38 +10:00
Oleg Pykhalov
27feda65e7
gnu: Add emacs-erc-hl-nicks. 
* gnu/packages/emacs.scm (emacs-erc-hl-nicks): New variable.

Signed-off-by: Arun Isaac <arunisaac@systemreboot.net>
 2017-08-10 14:55:09 +05:30
Oleg Pykhalov
1ee879e967
gnu: Add emacs-gitpatch. 
By the way, “gitpatch.el” says different version than release tarball.
Do I need to ask a developer?
--8<---------------cut here---------------start------------->8---
;; Author: Feng Shu <tumashu@163.com>
;; Homepage: https://github.com/tumashu/gitpatch
;; Keywords: convenience
;; Package-Requires: ((emacs "24.3"))
;; Version: 0.10
--8<---------------cut here---------------end--------------->8---

>From 9eddf07fa401468738c2f48a25e51ddef2a3ceed Mon Sep 17 00:00:00 2001
From: Oleg Pykhalov <go.wigust@gmail.com>
Date: Sat, 29 Jul 2017 14:22:48 +0300
Subject: [PATCH] gnu: Add emacs-gitpatch.

* gnu/packages/emacs.scm (emacs-gitpatch): New variable.

Signed-off-by: Arun Isaac <arunisaac@systemreboot.net>
 2017-08-10 14:37:17 +05:30
Oleg Pykhalov
a88adeb343
gnu: Add emacs-git-messenger. 
gnu/packages/emacs.scm (emacs-git-messenger): New variable.

Signed-off-by: Arun Isaac <arunisaac@systemreboot.net>
 2017-08-10 13:27:05 +05:30
Christopher Baines
1012056625
services: admin: Simplify the handling of the Tailon debug? option. 
* gnu/services/admin.scm (tailon-configuration-file-compiler): Simplify the
  handling of debug?.
 2017-08-09 23:50:35 +01:00
Christopher Baines
91fdc8a574
services: Update the Tailon service for Tailon 1.3.0. 
Tailon 1.3.0 (upgraded from 1.1.1) adds support for HTTP authentication.

* gnu/services/admin.scm (<tailon-configuration-file>): Add http-auth and
  users configuration values.
  (tailon-configuration-file-http-auth, tailon-configuration-file-users): New
  procedures.
  (tailon-configuration-file-compiler): Add support for the http-auth and
  users configuration options.
* doc/guix.texi (Monitoring Services): Document authentication for Tailon.
 2017-08-09 23:50:31 +01:00
Christopher Baines
f2d8e7f720
services: Add missing wrap-lines option to tailon. 
* gnu/services/admin.scm (<tailon-configuration-file>): Add wrap-lines.
  (tailon-configuration-wrap-lines): New procedure.
  (tailon-configuration-file-compiler): Add support for wrap-lines.
* doc/guix.texi (Monitoring Services): Document the wrap-lines Tailon
  configuration option.
 2017-08-09 23:50:27 +01:00
Christopher Baines
761f5865c8
gnu: Update tailon to version 1.3.0. 
From version 1.1.1.

* gnu/packages/logging.scm (tailon)[version]: Change to 1.3.0.
  [inputs]: Add python-tornado-http-auth.
 2017-08-09 23:50:23 +01:00
Christopher Baines
c795bc79d9
gnu: Add python-tornado-http-auth. 
* gnu/packages/python.scm (python-tornado-http-auth): New variable.
 2017-08-09 23:50:10 +01:00
Marius Bakke
4c6c683862
gnu: nmap: Update to 7.60. 
* gnu/packages/admin.scm (nmap): Update to 7.60.
 2017-08-10 00:15:35 +02:00
Marius Bakke
79d9525071
gnu: curl: Update replacement to 7.55.0. [security fixes] 
Fixes CVE-2017-1000099, CVE-2017-1000100, and CVE-2017-100101.
See <https://curl.haxx.se/docs/security.html> for details.

* gnu/packages/curl.scm (curl)[replacement]: Update to 7.55.0.
(curl-7.54.1): Rename to ...
(curl-7.55.0): ... this.
[source]: Update source URI to match upstream compression method change.
[arguments]: Add 'fix-Makefile' phase.
 2017-08-10 00:15:35 +02:00
Marius Bakke
2e8c61fcf0
gnu: samba: Update to 4.6.7. 
* gnu/packages/samba.scm (samba): Update to 4.6.7.
 2017-08-10 00:15:34 +02:00
Leo Famulari
ae7f246cf1
gnu: python-nbformat: Update to 4.3.0. 
* gnu/packages/python.scm (python-nbformat, python2-nbformat): Update to 4.3.0.
 2017-08-09 16:52:51 -04:00
Leo Famulari
10756b9ed1
gnu: gnupg: Update to 2.1.23. 
* gnu/packages/gnupg.scm (gnupg): Update to 2.1.23.
[arguments]: Remove 'enable-gpg2-is-gpg' from #:configure-flags, since it is now
the default.
 2017-08-09 16:01:33 -04:00
Ricardo Wurmus
1b22ecdac4
gnu: r-wgcna: Update to 1.61. 
* gnu/packages/bioinformatics.scm (r-wgcna): Update to 1.61.
[propagated-inputs]: Add r-rcpp, r-robust, r-survival.
 2017-08-09 20:08:13 +02:00
Ricardo Wurmus
c5f744a68d
gnu: Add r-robust. 
* gnu/packages/statistics.scm (r-robust): New variable.
 2017-08-09 20:08:13 +02:00
Ricardo Wurmus
5d0afe8849
gnu: Add r-fit-models. 
* gnu/packages/statistics.scm (r-fit-models): New variable.
 2017-08-09 20:08:13 +02:00
Ricardo Wurmus
0bae5fd6a7
gnu: Add r-rrcov. 
* gnu/packages/statistics.scm (r-rrcov): New variable.
 2017-08-09 20:08:13 +02:00
Ricardo Wurmus
23841b2573
gnu: Add r-pcapp. 
* gnu/packages/statistics.scm (r-pcapp): New variable.
 2017-08-09 20:08:13 +02:00
Ricardo Wurmus
0ecd065839
gnu: r-gdtools: Update to 0.1.5. 
* gnu/packages/statistics.scm (r-gdtools): Update to 0.1.5.
 2017-08-09 20:08:12 +02:00
Ricardo Wurmus
c3317cd9fb
gnu: r-ggbeeswarm: Update to 0.6.0. 
* gnu/packages/statistics.scm (r-ggbeeswarm): Update to 0.6.0.
 2017-08-09 20:08:12 +02:00
Mark H Weaver
ea0277abcd
gnu: icecat: Add more fixes from upstream mozilla-esr52. 
* gnu/packages/gnuzilla.scm (icecat)[source]: Add fixes for CVE-2017-7802,
CVE-2017-7803, CVE-2017-7807, and the remaining 6 out of 23 changesets for
CVE-2017-7779.
 2017-08-09 13:16:52 -04:00
Mark H Weaver
12025fb9b0
gnu: icecat: Rename patches to reflect CVE assignments. 
Document that our existing patches include fixes for CVE-2017-7753,
CVE-2017-7784, CVE-2017-7786, CVE-2017-7787, CVE-2017-7791, CVE-2017-7792,
CVE-2017-7798, CVE-2017-7798, CVE-2017-7800, CVE-2017-7801, and 17 out of 23
changesets for CVE-2017-7779.

* gnu/packages/gnuzilla.scm (icecat)[source]: Rename patches to reflect CVE
assignments.
 2017-08-09 13:16:43 -04:00
ng0
28e12d6c81
gnu: gnurl: Update to 7.55.0. 
* gnu/packages/gnunet.scm (gnurl): Update to 7.55.0.

Signed-off-by: Tobias Geerinckx-Rice <me@tobias.gr>
 2017-08-09 18:16:51 +02:00
Tobias Geerinckx-Rice
a4afc536f9
gnu: virt-manager: Update to 1.4.2. 
* gnu/packages/virtualization.scm (virt-manager): Update to 1.4.2.
 2017-08-09 16:45:32 +02:00
Tobias Geerinckx-Rice
448052b713
gnu: libgdata: Disable failing tests. 
* gnu/packages/gnome.scm (libgdata)[arguments]: Add ‘disable-failing-tests’
phase.
 2017-08-09 16:31:06 +02:00
Ricardo Wurmus
18f5d2a70a
gnu: Add reference to (gnu packages graph). 
This is a follow-up to 1738138cb3.
 2017-08-09 15:43:35 +02:00
Ricardo Wurmus
1738138cb3
gnu: r-igraph: Move to (gnu packages graph). 
* gnu/packages/statistics.scm (r-igraph): Move from here...
* gnu/packages/graph.scm (r-igraph): ...to here.
 2017-08-09 14:47:47 +02:00
Ricardo Wurmus
31476df32e
gnu: Add python-igraph. 
* gnu/packages/graph.scm (python-igraph): New variable.
 2017-08-09 14:47:47 +02:00
Ricardo Wurmus
e57fffad90
gnu: Add igraph. 
* gnu/packages/graph.scm: New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add it.
 2017-08-09 14:47:47 +02:00
Efraim Flashner
ea77385c4c
gnu: viewnior: Don't build icon-theme.cache. 
* gnu/packages/image-viewers.scm (viewnior)[arguments]: Add phase to
disable building the icon-theme.cache.
 2017-08-09 14:09:43 +03:00
Manolis Ragkousis
2d5bf32b8a
gnu: googletest: Build shared libraries. 
* gnu/packages/check.scm (googletest)[arguments]: Pass "-DBUILD_SHARED_LIBS=ON"
  in #:configure-flags.
 2017-08-09 13:53:29 +03:00
Manolis Ragkousis
c608fe8cf3
gnu: Add ois. 
* gnu/packages/game-development.scm (ois): New variable.
 2017-08-09 13:53:16 +03:00
Eric Bavier
d84b09e937
gnu: dealii: Update to 8.5.0. 
* gnu/packages/maths.scm (dealii): Update to 8.5.0.
[arguments]: Delete 'hint-example-prefix phase, which would need adjusting for
this version.  Users can use e.g. 'export DEAL_II_DIR=$GUIX_ENVIRONMENT'.
Adjust configuration flags.
 2017-08-09 01:56:53 -05:00
Eric Bavier
05cca6ce90
gnu: stress-make: Patch default shell. 
* gnu/packages/debug.scm (stress-make)[arguments]: Add 'set-default-shell
phase.
 2017-08-09 01:56:53 -05:00
Eric Bavier
bd5b5ac0c5
gnu: suitesparse: Update to 4.5.5. 
* gnu/packages/maths.scm (suitesparse): Update to 4.5.5.
[source]: Add 'modules' and 'snippet' field to remove bundled source.
[arguments]: Remove 'prepare-out' phase.  Adjust #:make-flags for metis.
Make build parallel, since it now appears to be safe.
[inputs]: Add metis.
 2017-08-09 01:56:53 -05:00
Eric Bavier
2509522c4f
gnu: suitesparse: Use modify-phases. 
* gnu/packages/maths.scm (suitesparse)[arguments]: Use modify-phases.
 2017-08-09 01:56:53 -05:00
Eric Bavier
9731c412e9
gnu: petsc, slepc: Use 'parallel-job-count'. 
* gnu/packages/maths.scm (petsc, slepc)[arguments]: Set #:make-flags to
override default unlimited '-j'.
(petsc)[arguments]: Scrub build machine cores from installed files in
'clean-local-references' phase.
 2017-08-09 01:56:53 -05:00
Eric Bavier
baeaf8821d
gnu: slepc: Update to 3.7.4. 
* gnu/packages/maths.scm (slepc): Update to 3.7.4.
[source]: Use direct source link.  Remove 'file-name' field.
 2017-08-09 01:56:52 -05:00
Eric Bavier
41a46a5035
gnu: petsc: Update to 3.7.6. 
* gnu/packages/maths.scm (petsc): Update to 3.7.6.
 2017-08-09 01:56:46 -05:00
Tobias Geerinckx-Rice
026051953d
gnu: epiphany: Update to 3.24.3. 
* gnu/packages/gnome.scm (epiphany): Update to 3.24.3.
 2017-08-09 07:20:57 +02:00
Tobias Geerinckx-Rice
c762011e40
gnu: tracker: Update to 1.12.2. 
* gnu/packages/gnome.scm (tracker): Update to 1.12.2.
 2017-08-09 07:20:56 +02:00
Tobias Geerinckx-Rice
666901b298
gnu: gnome-online-accounts: Update to 3.24.2. 
* gnu/packages/gnome.scm (gnome-online-accounts): Update to 3.24.2.
 2017-08-09 07:20:56 +02:00