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136291 commits

Author SHA1 Message Date
Ricardo Wurmus
bdf3ab2e3b
gnu: r-bioassayr: Update to 1.42.0.
* gnu/packages/bioconductor.scm (r-bioassayr): Update to 1.42.0.

Change-Id: I6735615a04c3e8943086aa0cffb03dadb723a654
2024-05-08 12:53:36 +02:00
Ricardo Wurmus
83b7790cae
gnu: r-fmcsr: Update to 1.46.0.
* gnu/packages/bioconductor.scm (r-fmcsr): Update to 1.46.0.

Change-Id: Id233057e337e67a3e1edfaaf10ef5e273901436b
2024-05-08 12:53:36 +02:00
Ricardo Wurmus
16d94b478d
gnu: r-chemminer: Update to 3.56.0.
* gnu/packages/bioconductor.scm (r-chemminer): Update to 3.56.0.

Change-Id: I04a8ec120f3c949ede3b6c38590d56455a1b32dc
2024-05-08 12:53:36 +02:00
Ricardo Wurmus
cfc7f49dc5
gnu: r-chemmineob: Update to 1.42.0.
* gnu/packages/bioconductor.scm (r-chemmineob): Update to 1.42.0.

Change-Id: I6de9b4e325ed48535934a23a284ffc8f6b51c77a
2024-05-08 12:53:36 +02:00
Ricardo Wurmus
0b85ec45ee
gnu: r-biggr: Update to 1.40.0.
* gnu/packages/bioconductor.scm (r-biggr): Update to 1.40.0.

Change-Id: Ic28d925fef3901693c7d7769a494bccc8da5121b
2024-05-08 12:53:36 +02:00
Ricardo Wurmus
25c010f0a7
gnu: r-hyperdraw: Update to 1.56.0.
* gnu/packages/bioconductor.scm (r-hyperdraw): Update to 1.56.0.

Change-Id: I6279b34131142abcf14a8fd08b9faa1298013a85
2024-05-08 12:53:36 +02:00
Ricardo Wurmus
9ec37522fd
gnu: r-hypergraph: Update to 1.76.0.
* gnu/packages/bioconductor.scm (r-hypergraph): Update to 1.76.0.

Change-Id: Id3778bdb1eb98ef71b6dbca207b1a96acf8e8e28
2024-05-08 12:53:36 +02:00
Ricardo Wurmus
6006340e76
gnu: r-hybridmtest: Update to 1.48.0.
* gnu/packages/bioconductor.scm (r-hybridmtest): Update to 1.48.0.

Change-Id: I89893ca526c27493f3966e3d777366024dc0fa91
2024-05-08 12:53:36 +02:00
Ricardo Wurmus
3a7e38fd78
gnu: r-rsbml: Update to 2.62.0.
* gnu/packages/bioconductor.scm (r-rsbml): Update to 2.62.0.

Change-Id: I870e9d67c6f8123c53ec72c49d934613e25d9c77
2024-05-08 12:53:36 +02:00
Ricardo Wurmus
1e2a028525
gnu: r-bifet: Update to 1.24.0.
* gnu/packages/bioconductor.scm (r-bifet): Update to 1.24.0.

Change-Id: I1737a7b834c834436791eb407c275f1b322d2c4c
2024-05-08 12:53:36 +02:00
Ricardo Wurmus
c1d8f61898
gnu: r-bicare: Update to 1.62.0.
* gnu/packages/bioconductor.scm (r-bicare): Update to 1.62.0.

Change-Id: I9861a66178d503c45122a64a219086ef9cd8754e
2024-05-08 12:53:36 +02:00
Ricardo Wurmus
4ce9c19290
gnu: r-bhc: Update to 1.56.0.
* gnu/packages/bioconductor.scm (r-bhc): Update to 1.56.0.

Change-Id: I0bba03639a3f1b301214051fd00b6f13de49f433
2024-05-08 12:53:36 +02:00
Ricardo Wurmus
40a55d3f50
gnu: r-bgx: Update to 1.70.0.
* gnu/packages/bioconductor.scm (r-bgx): Update to 1.70.0.

Change-Id: Ibbbae41e23ab19f5cba7e2264fa2c2848a38a15f
2024-05-08 12:53:36 +02:00
Ricardo Wurmus
841b39867d
gnu: r-acde: Update to 1.34.0.
* gnu/packages/bioconductor.scm (r-acde): Update to 1.34.0.

Change-Id: Iad20ebfe118270c0f878ac1d3c7c0cbe521ab359
2024-05-08 12:53:36 +02:00
Ricardo Wurmus
31878ae8ec
gnu: r-acme: Update to 2.60.0.
* gnu/packages/bioconductor.scm (r-acme): Update to 2.60.0.

Change-Id: I3d29a5f5c4df1f77b5dc50415d537cde96e53437
2024-05-08 12:53:36 +02:00
Ricardo Wurmus
98cae12891
gnu: r-acgh: Update to 1.82.0.
* gnu/packages/bioconductor.scm (r-acgh): Update to 1.82.0.

Change-Id: I2e354918b664aeb4f58aff1f7dd6c7ade652dcca
2024-05-08 12:53:36 +02:00
Ricardo Wurmus
7619b4b16c
gnu: r-ace: Update to 1.22.0.
* gnu/packages/bioconductor.scm (r-ace): Update to 1.22.0.

Change-Id: I05b8a0c1b400f2789691358a96653abd91761b57
2024-05-08 12:53:36 +02:00
Ricardo Wurmus
1d14455948
gnu: r-universalmotif: Update to 1.22.0.
* gnu/packages/bioconductor.scm (r-universalmotif): Update to 1.22.0.

Change-Id: I8162abd88011435179e0c3ca41fe9d058f8f4522
2024-05-08 12:53:36 +02:00
Ricardo Wurmus
23d29d93dd
gnu: r-ucell: Update to 2.8.0.
* gnu/packages/bioconductor.scm (r-ucell): Update to 2.8.0.

Change-Id: I6c7867ce56a96e9320f050c9653ad558d9c9d102
2024-05-08 12:53:35 +02:00
Ricardo Wurmus
30cdef4c82
gnu: r-variancepartition: Update to 1.34.0.
* gnu/packages/bioconductor.scm (r-variancepartition): Update to 1.34.0.

Change-Id: I9908a4020f5f17e015d9be1f54ea0383e5638759
2024-05-08 12:53:35 +02:00
Ricardo Wurmus
31325acf18
gnu: r-variantfiltering: Update to 1.40.0.
* gnu/packages/bioconductor.scm (r-variantfiltering): Update to 1.40.0.

Change-Id: I3e41dfc9a50657003144c8b767a5d424be571df2
2024-05-08 12:53:35 +02:00
Ricardo Wurmus
2eb6a2fcf4
gnu: r-tilingarray: Update to 1.82.0.
* gnu/packages/bioconductor.scm (r-tilingarray): Update to 1.82.0.

Change-Id: I1353b206d83001b8965a949e55908a1306a8de7c
2024-05-08 12:53:35 +02:00
Ricardo Wurmus
c7fe318467
gnu: r-wavcluster: Update to 2.38.0.
* gnu/packages/bioconductor.scm (r-wavcluster): Update to 2.38.0.

Change-Id: I285c6f42b2cde094e6c32e95b473c9540045866b
2024-05-08 12:53:35 +02:00
Ricardo Wurmus
b3b6f34f35
gnu: r-bigmelon: Update to 1.30.0.
* gnu/packages/bioconductor.scm (r-bigmelon): Update to 1.30.0.
[native-inputs]: Remove r-knitr.

Change-Id: I5fd606d69b30ad6768cfd11594c6be66a9ae56fe
2024-05-08 12:53:35 +02:00
Ricardo Wurmus
c7dfb85604
gnu: r-gdsfmt: Update to 1.40.0.
* gnu/packages/bioconductor.scm (r-gdsfmt): Update to 1.40.0.

Change-Id: I972ee519a6c81bb88577b8ec86ca7a6ff6ab39d6
2024-05-08 12:53:35 +02:00
Ricardo Wurmus
2ff8b4be6d
gnu: r-watermelon: Update to 2.10.0.
* gnu/packages/bioconductor.scm (r-watermelon): Update to 2.10.0.

Change-Id: Iee6a26d982a87f586ad34625e8cd64d9df839fe1
2024-05-08 12:53:35 +02:00
Ricardo Wurmus
45a4d44004
gnu: r-roc: Update to 1.80.0.
* gnu/packages/bioconductor.scm (r-roc): Update to 1.80.0.

Change-Id: I4053fc2e0ab8298b95da11357c3543bdc4480272
2024-05-08 12:53:35 +02:00
Ricardo Wurmus
c25e80f57c
gnu: r-genie3: Update to 1.26.0.
* gnu/packages/bioconductor.scm (r-genie3): Update to 1.26.0.

Change-Id: I7eb05930f49b4c44678e5069cda9083fa3b2d86a
2024-05-08 12:53:35 +02:00
Ricardo Wurmus
15f55f8107
gnu: r-circrnaprofiler: Update to 1.18.0.
* gnu/packages/bioconductor.scm (r-circrnaprofiler): Update to 1.18.0.

Change-Id: I5249ad323937706edb460e6f5dbc67f3b89aeea4
2024-05-08 12:53:35 +02:00
Ricardo Wurmus
a675626580
gnu: r-cicero: Update to 1.22.0.
* gnu/packages/bioconductor.scm (r-cicero): Update to 1.22.0.

Change-Id: Iec08b05b328caf90a1a97b1dcec68eda81817f0a
2024-05-08 12:53:35 +02:00
Ricardo Wurmus
b9dc1c39a9
gnu: r-chicago: Update to 1.32.0.
* gnu/packages/bioconductor.scm (r-chicago): Update to 1.32.0.

Change-Id: I5ae8e14628f6ba5babf4202a16cbf2a93d4812a0
2024-05-08 12:53:35 +02:00
Ricardo Wurmus
b189f75029
gnu: r-rcistarget: Update to 1.24.0.
* gnu/packages/bioconductor.scm (r-rcistarget): Update to 1.24.0.
[propagated-inputs]: Add r-zoo.

Change-Id: Ifef3f1d3a3b0a6aa960d96d702c380c0b721707c
2024-05-08 12:53:35 +02:00
Ricardo Wurmus
ed72f9bf20
gnu: r-depecher: Update to 1.20.0.
* gnu/packages/bioconductor.scm (r-depecher): Update to 1.20.0.
[propagated-inputs]: Add r-clusterr.

Change-Id: I438cfd508bb90af157a1b17a520d17374b5e1007
2024-05-08 12:53:35 +02:00
Ricardo Wurmus
e258bc7be1
gnu: r-mixomics: Update to 6.28.0.
* gnu/packages/bioconductor.scm (r-mixomics): Update to 6.28.0.

Change-Id: I878f0f648b15fc17a69c8b72aedf88c8d9b05f1d
2024-05-08 12:53:35 +02:00
Ricardo Wurmus
7a3af14943
gnu: r-flowsom: Update to 2.12.0.
* gnu/packages/bioconductor.scm (r-flowsom): Update to 2.12.0.

Change-Id: I0bd56b6915c9aed7ec5e86191f3a90ee5126bd79
2024-05-08 12:53:35 +02:00
Ricardo Wurmus
3263b67123
gnu: r-opencyto: Update to 2.16.0.
* gnu/packages/bioconductor.scm (r-opencyto): Update to 2.16.0.

Change-Id: I4b0121062299fac4831edaa096a1efdf70a8b7ea
2024-05-08 12:53:35 +02:00
Ricardo Wurmus
4544b49e78
gnu: r-flowstats: Update to 4.16.0.
* gnu/packages/bioconductor.scm (r-flowstats): Update to 4.16.0.

Change-Id: I41a6906f6856b3bb7ecdcc9b5376213c80b4b55c
2024-05-08 12:53:35 +02:00
Ricardo Wurmus
13652b01d2
gnu: r-flowworkspace: Update to 4.16.0.
* gnu/packages/bioconductor.scm (r-flowworkspace): Update to 4.16.0.

Change-Id: Ib561cb7faf49b258a9fba370d62b2d2d3babff4d
2024-05-08 12:53:35 +02:00
Ricardo Wurmus
cf25a9b0f2
gnu: r-rprotobuflib: Update to 2.16.0.
* gnu/packages/bioconductor.scm (r-rprotobuflib): Update to 2.16.0.

Change-Id: I9ec03796c28a24ee683580c8be8236fc46ec4895
2024-05-08 12:53:35 +02:00
Ricardo Wurmus
34880ea220
gnu: r-flowclust: Update to 3.42.0.
* gnu/packages/bioconductor.scm (r-flowclust): Update to 3.42.0.

Change-Id: Ibdffc56edbbc159b090302ef9491c176b93ad993
2024-05-08 12:53:35 +02:00
Ricardo Wurmus
1c80d54d79
gnu: r-flowviz: Update to 1.68.0.
* gnu/packages/bioconductor.scm (r-flowviz): Update to 1.68.0.

Change-Id: I09f751cb47129b67903fb0b279a9c1b7b3555f7a
2024-05-08 12:53:34 +02:00
Ricardo Wurmus
90cdcc1227
gnu: r-ggcyto: Update to 1.32.0.
* gnu/packages/bioconductor.scm (r-ggcyto): Update to 1.32.0.

Change-Id: I0a27617ec6dec5a41201ffdf4352d5d70946a990
2024-05-08 12:53:34 +02:00
Ricardo Wurmus
af2f837060
gnu: r-ncdfflow: Update to 2.50.0.
* gnu/packages/bioconductor.scm (r-ncdfflow): Update to 2.50.0.

Change-Id: I462cd25ccd4f4e96a21293d7d6bbfab68665b91c
2024-05-08 12:53:34 +02:00
Ricardo Wurmus
45c2302159
gnu: r-flowmeans: Update to 1.64.0.
* gnu/packages/bioconductor.scm (r-flowmeans): Update to 1.64.0.

Change-Id: I0b99b3c3ebf292d9e7318a5fe33900be0634ccad
2024-05-08 12:53:34 +02:00
Ricardo Wurmus
371f8a8339
gnu: r-flowcore: Update to 2.16.0.
* gnu/packages/bioconductor.scm (r-flowcore): Update to 2.16.0.

Change-Id: I545b9e5453abc33a64a96a814fff5539daa59c3e
2024-05-08 12:53:34 +02:00
Ricardo Wurmus
f3fca2f140
gnu: r-cytolib: Update to 2.16.0.
* gnu/packages/bioconductor.scm (r-cytolib): Update to 2.16.0.

Change-Id: I66bc6871d7031229ee64765732cee003283b0d19
2024-05-08 12:53:34 +02:00
Ricardo Wurmus
ebee8425fb
gnu: r-consensusclusterplus: Update to 1.68.0.
* gnu/packages/bioconductor.scm (r-consensusclusterplus): Update to 1.68.0.

Change-Id: Ic061325418b63fed6ebaf60af1b53cd5720af9d4
2024-05-08 12:53:34 +02:00
Ricardo Wurmus
ded8565517
gnu: r-flowai: Update to 1.34.0.
* gnu/packages/bioconductor.scm (r-flowai): Update to 1.34.0.

Change-Id: I7e70ec8330092de08663200317032474b339cf7b
2024-05-08 12:53:34 +02:00
Ricardo Wurmus
2cdd8e24bf
gnu: r-flames: Update to 1.10.0.
* gnu/packages/bioconductor.scm (r-flames): Update to 1.10.0.
[propagated-inputs]: Add r-iranges, r-testthat, r-tibble, r-tidyselect, and r-txdbmaker.

Change-Id: I8cdc5c4370249f98079ffa83f16320f6f07f4650
2024-05-08 12:53:34 +02:00
Ricardo Wurmus
4c63bceb85
gnu: r-rsubread: Update to 2.18.0.
* gnu/packages/bioconductor.scm (r-rsubread): Update to 2.18.0.

Change-Id: Ia60b6fbefae10e668bf2d74e8e34e0af62286c3a
2024-05-08 12:53:34 +02:00