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128885 commits

Author SHA1 Message Date
Pierre-Henry Fröhring
303b9bd163
gnu: Add elixir-nimble-parsec.
* gnu/packages/elixir-xyz.scm (elixir-nimble-parsec): New variable.

Change-Id: I79bab8095aee3212bc295354ead55df49ef92d17
Signed-off-by: Liliana Marie Prikler <liliana.prikler@gmail.com>
2023-12-17 22:22:31 +01:00
Pierre-Henry Fröhring
612f8afac1
gnu: Add elixir-hex.
* gnu/packages/elixir.scm (elixir-hex): New variable.

Change-Id: I957688ae4e078afd79acd439880c38083fdab83a
Signed-off-by: Liliana Marie Prikler <liliana.prikler@gmail.com>
2023-12-17 22:22:30 +01:00
Pierre-Henry Fröhring
c2ed5a7d13
gnu: elixir: Wrap binaries.
* gnu/packages/elixir.scm (elixir)[#:phases]: Add ‘wrap-programs’.
[native-search-path]: Add “GUIX_ELIXIR_LIBS”.

Change-Id: I75bdde3aeedc1d495ea5fc2c5fc3fcdc5dc3fad2
Signed-off-by: Liliana Marie Prikler <liliana.prikler@gmail.com>
2023-12-17 22:22:30 +01:00
Pierre-Henry Fröhring
e0e6d659b5
build-system: Add mix-build-system.
* guix/build-system/mix.scm: New file.
* guix/build/mix-build-system.scm: New file.

Change-Id: I8066d00f7ada4a384621bf541e679bc512e93435
Signed-off-by: Liliana Marie Prikler <liliana.prikler@gmail.com>
2023-12-17 22:22:30 +01:00
Liliana Marie Prikler
7b826d5734
gnu: python-renpy: Update to 8.1.3.
* gnu/packages/game-development.scm (python-renpy): Update to 8.1.3.

Change-Id: I5e265cdc0f83eda9ae19a3627fa8cd69ef103806
2023-12-17 22:22:30 +01:00
Liliana Marie Prikler
0cfaf5654a
gnu: python-pygame-sdl2: Update to 2.1.0+renpy8.1.3.
* gnu/packages/game-development.scm (python-pygame-sdl2): Update to
2.1.0+renpy8.1.3.

Change-Id: Ide0baef4762b2c4174d10e07ec94427916ac41af
2023-12-17 22:22:30 +01:00
Andrew Tropin
6ab242609d
gnu: guile-ares-rs: Update to 0.9.1.
* gnu/packages/guile-xyz.scm (guile-ares-rs): Update to 0.9.1.
2023-12-17 10:25:08 +03:00
Leo Famulari
fe86819d8b
gnu: linux-libre 4.14: Update to 4.14.333.
* gnu/packages/linux.scm (linux-libre-4.14-version): Update to 4.14.333.
(linux-libre-4.14-pristine-source): Update hash.

Change-Id: I32f32f1ccb922f845d28dc84d2389bdf6636f839
2023-12-16 15:59:39 -05:00
Leo Famulari
15af10f69c
gnu: linux-libre 4.19: Update to 4.19.302.
* gnu/packages/linux.scm (linux-libre-4.19-version): Update to 4.19.302.
(linux-libre-4.19-pristine-source): Update hash.

Change-Id: Ic8f6e5311ab9fc4c9adeb4f006fd9b2d7b501359
2023-12-16 15:59:39 -05:00
Leo Famulari
fd109a7dbb
gnu: linux-libre 5.4: Update to 5.4.264.
* gnu/packages/linux.scm (linux-libre-5.4-version): Update to 5.4.264.
(linux-libre-5.4-pristine-source): Update hash.

Change-Id: Id263ea3c098e61b25794e403a4722824b37539f1
2023-12-16 15:59:39 -05:00
Leo Famulari
900e491fdb
gnu: linux-libre 5.10: Update to 5.10.204.
* gnu/packages/linux.scm (linux-libre-5.10-version): Update to 5.10.204.
(linux-libre-5.10-pristine-source): Update hash.

Change-Id: Ibaeb98f2ea80724e95a40f6bb0478dec5b6ca3dc
2023-12-16 15:59:39 -05:00
Leo Famulari
ea550e71f3
gnu: linux-libre 5.15: Update to 5.15.143.
* gnu/packages/linux.scm (linux-libre-5.15-version): Update to 5.15.143.
(linux-libre-5.15-pristine-source): Update hash.

Change-Id: I7854728eb1cc38afa2fb1d8cfbd9463cf10ee8d8
2023-12-16 15:59:38 -05:00
Leo Famulari
833931c96d
gnu: linux-libre 6.1: Update to 6.1.68.
* gnu/packages/linux.scm (linux-libre-6.1-version): Update to 6.1.68.
(linux-libre-6.1-pristine-source): Update hash.

Change-Id: I23cb34828bc0f31333ea737e566ee68967ed965e
2023-12-16 15:59:38 -05:00
Leo Famulari
6467384d2a
gnu: linux-libre: Update to 6.6.7.
* gnu/packages/linux.scm (linux-libre-6.6-version): Update to 6.6.7.
(linux-libre-6.6-pristine-source): Update hash.

Change-Id: I72ffbc67e66f9e4330b87bb189b2a5d29abcdf0b
2023-12-16 15:59:38 -05:00
Leo Famulari
f061bc5ba3
gnu: python-msgpack-transitional: Update code comment.
* gnu/packages/python-xyz.scm (python-msgpack-transitional): Update comment.

Change-Id: I93afe78c40ac87c6e5147d286cf257ec9a8afd68
2023-12-16 15:26:26 -05:00
Leo Famulari
efb4620d7c
gnu: Remove python-msgpack-1.0.2.
This package is no longer used in Guix.

* gnu/packages/python-xyz.scm (python-msgpack-1.0.2): Remove variable.

Change-Id: I6216003e6312c5587ae3471ba9870865ee68f680
2023-12-16 15:26:26 -05:00
Leo Famulari
61138a18d5
gnu: Borg: Update to 1.2.7.
* gnu/packages/backup.scm (borg): Update to 1.2.7.
[inputs]: Replace python-msgpack-1.0.2 with python-msgpack.

Change-Id: I8529d737d90105f877f1c099f4b3afa9b0ed9fa8
2023-12-16 15:26:22 -05:00
Efraim Flashner
6aade039e1
guix: import: Report go version for go importer.
* guix/import/go.scm (go-package, go.mod-go-version): New procedures.
(go-module->guix-package): Add the #:go keyword in the generated package
definition if the required go is newer than the default go.
* tests/go.scm (mock-http-get): Use gexps for package arguments.

Change-Id: I8d005740a442330ac307a40a53764c803ceffc4f
2023-12-16 18:05:58 +02:00
Efraim Flashner
e35dd13d8a
guix: import: Don't include indirect dependencies in go.
* guix/import/go.scm (parse-go.mod)[define-peg-patern require]: Adjust
the peg pattern to reject lines with the 'indirect' comment in them.

Change-Id: I9618bbaa1cb8c6549ced875e3c8d32afc72c3b9b
2023-12-16 18:05:58 +02:00
Efraim Flashner
ed9d47c6ae
gnu: fpc: Add support for aarch64-linux.
* gnu/packages/pascal.scm (fpc-bootstrap-aarch64): New variable.
(fpc)[arguments]: Add cases for aarch64-linux.
[native-inputs]: Add case for fpc-binary for aarch64-linux.

Change-Id: I03630f9b36c10636db23c00aaf8f72b9ddf2390d
2023-12-16 18:05:58 +02:00
Efraim Flashner
617e3dd2ae
gnu: fpc: Add support for powerpc64le-linux.
* gnu/packages/pascal.scm (fpc-bootstrap-powerpc64le): New variable.
(fpc)[arguments]: Add cases for powerpc64le-linux.
[native-inputs]: Add case for fpc-binary for powerpc64le-linux.

Change-Id: I4f12003b35ef60764e7e25cc14aed7d243c6fe0f
2023-12-16 18:05:58 +02:00
Efraim Flashner
2b501ed730
gnu: fpc: Add support for powerpc-linux.
* gnu/packages/pascal.scm (fpc-bootstrap-powerpc): New variable.
(fpc)[arguments]: Add cases for powerpc-linux.
[native-inputs]: Add case for fpc-binary for powerpc-linux.

Change-Id: I0d4d9dda9d4c8f70ff20031ab94f1dc439df88e2
2023-12-16 18:05:58 +02:00
Efraim Flashner
1954a1e33d
gnu: fpc: Patch more dynamic-linker paths.
* gnu/packages/pascal.scm (fpc)[arguments]: Patch more paths to the
dynamic-linker in the 'configure phase.

Change-Id: I0eebf1271d24e22839db0a8fd96385408067fdbf
2023-12-16 18:05:57 +02:00
Efraim Flashner
7b949bc318
gnu: fpc: Fix building on i686-linux.
* gnu/packages/pascal.scm (fpc)[source]: Add patch.
* gnu/packages/patches/fpc-glibc-2.34-compat.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.

Change-Id: I6fde62de63171d7e16754b36db460f4073b1979d
2023-12-16 18:05:57 +02:00
Efraim Flashner
e9e08b02b5
gnu: valgrind: Mark as unsupported on i586-gnu.
* gnu/packages/valgrind.scm (valgrind)[supported-systems]: Remove
i586-gnu from supported systems.

Change-Id: I260b9b343c30da81d0420c92431d56d22c260cc4
2023-12-16 18:05:57 +02:00
Efraim Flashner
580a7cc5a9
gnu: valgrind: Use correct glibc.
* gnu/packages/valgrind.scm (valgrind/interactive)[inputs]: Replace
glibc with libc-for-target.

Change-Id: If8e428a12647c8aeb36fa90f36d7c8d12055f2b9
2023-12-16 18:05:54 +02:00
Ricardo Wurmus
d5298c5e33
gnu: r-with-tests: Update to 4.3.2.
* gnu/packages/statistics.scm (r-with-tests): Update to 4.3.2.

Change-Id: Ifd949eb363582e533d629e573ea98c10edf127c3
2023-12-16 13:06:15 +01:00
Liliana Marie Prikler
9f6210cc5c
gnu: yelp: Build with webkitgtk-for-gtk3.
This replacement was omitted in f3da903b01:
Yelp 42 still builds with GTK+ 3, so let's use the right Webkit.

* gnu/packages/gnome.scm (yelp)[inputs]: Replace webkitgtk with
webkitgtk-for-gtk3.
2023-12-16 02:11:07 +01:00
Liliana Marie Prikler
822befbcae
gnu: epiphany: Build with webkitgtk-for-gtk3.
This replacement was omitted in f3da903b01:
Epiphany 42 still builds with GTK+ 3, so let's use the right Webkit.

* gnu/packages/gnome.scm (epiphany)[inputs]: Replace webkitgtk with
webkitgtk-for-gtk3.
2023-12-12 22:07:08 +01:00
Tobias Geerinckx-Rice
fa0563e7fa
bash completion: Complete ‘guix style -f’ with files.
* etc/completion/bash/guix (_guix_is_dash_f):
Recognise ‘--whole-file’ as a member of the ‘-f’ family.
(_guix_complete): Add a new clause for ‘guix style’.

Reported by cmiller in #guix.

Change-Id: I3f55f7fd7fb8610dc13770ebfe70d9f65c1497af
2023-12-10 01:00:00 +01:00
Tobias Geerinckx-Rice
d993ed43b2
daemon: Sacrifice builders on OOM.
* nix/libstore/build.cc (DerivationGoal::runChild):
Maximise our OOM score adjustment.

Change-Id: I418c763b499ca16e1ffe3c6033319112b9744f51
2023-12-10 01:00:00 +01:00
Tobias Geerinckx-Rice
38035705ed
gnu: inxi-minimal: Update to 3.3.31-2.
* gnu/packages/admin.scm (inxi-minimal): Update to 3.3.31-2.

Change-Id: I6645cdc0870396ef6726bed1e24af534a4e03503
2023-12-10 01:00:00 +01:00
Tobias Geerinckx-Rice
a4bbe113ff
gnu: mediainfo: Update to 23.11.
* gnu/packages/video.scm (mediainfo): Update to 23.11.

Change-Id: Ife3dad58749d292c04d6b5cca8fb0eabf3a7a02a
2023-12-10 01:00:00 +01:00
Tobias Geerinckx-Rice
ec7d33c108
gnu: libmediainfo: Update to 23.11.
* gnu/packages/video.scm (libmediainfo): Update to 23.11.

Change-Id: Id7967fb5ed1304055ddeea73b550bd9c5e7ec6ec
2023-12-10 01:00:00 +01:00
Tobias Geerinckx-Rice
7a7b7c176f
gnu: iperf: Update to 3.16.
* gnu/packages/networking.scm (iperf): Update to 3.16.

Change-Id: I8463174ba4a0773ef62d3e888332a223cefad56e
2023-12-10 01:00:00 +01:00
Ricardo Wurmus
92f179ab20
gnu: r-tximeta: Update to 1.20.1.
* gnu/packages/bioconductor.scm (r-tximeta): Update to 1.20.1.

Change-Id: Id29bdc8c00f957854ed5ba38c2cbbb91e04bbf78
2023-12-15 17:47:43 +01:00
Ricardo Wurmus
e19a7ca446
gnu: r-biomvrcns: Update to 1.42.2.
* gnu/packages/bioconductor.scm (r-biomvrcns): Update to 1.42.2.

Change-Id: I956718d0ecb503546564434fbea82a886d4de9f4
2023-12-15 17:47:43 +01:00
Ricardo Wurmus
5765ddc666
gnu: r-basilisk: Update to 1.14.1.
* gnu/packages/bioconductor.scm (r-basilisk): Update to 1.14.1.

Change-Id: I7c05a536a58ca7bc7d24fdb5f39a420611bebf45
2023-12-15 17:47:42 +01:00
Ricardo Wurmus
32cd9f9993
gnu: r-basilisk-utils: Update to 1.14.1.
* gnu/packages/bioconductor.scm (r-basilisk-utils): Update to 1.14.1.

Change-Id: Icda5e71c0a709e2de4c6303774c37224a9476d62
2023-12-15 17:47:42 +01:00
Ricardo Wurmus
1b5ffaa960
gnu: r-gviz: Update to 1.46.1.
* gnu/packages/bioconductor.scm (r-gviz): Update to 1.46.1.

Change-Id: I10e68ee45be2cd2cddc217e75ee6667323c4dd57
2023-12-15 17:47:42 +01:00
Ricardo Wurmus
280162165b
gnu: r-mscoreutils: Update to 1.14.1.
* gnu/packages/bioconductor.scm (r-mscoreutils): Update to 1.14.1.

Change-Id: Ia978e23f1f0bf5a58ffa2c76a65c5f9982629aac
2023-12-15 17:47:42 +01:00
Ricardo Wurmus
2f14829a7c
gnu: r-sparsearray: Update to 1.2.2.
* gnu/packages/bioconductor.scm (r-sparsearray): Update to 1.2.2.

Change-Id: I96f367bf5c39c973e1c5fad3b9620bfcaf88417a
2023-12-15 17:47:41 +01:00
Ricardo Wurmus
aa3e41026a
gnu: r-scater: Update to 1.30.1.
* gnu/packages/bioconductor.scm (r-scater): Update to 1.30.1.

Change-Id: I5e497b654bc4a26adc6d956f728f31ae631a239c
2023-12-15 17:47:41 +01:00
Ricardo Wurmus
2fb96bed75
gnu: r-s4vectors: Update to 0.40.2.
* gnu/packages/bioconductor.scm (r-s4vectors): Update to 0.40.2.

Change-Id: I6201d17fa2a6be618feb26ad632b9249f87d86c5
2023-12-15 17:47:41 +01:00
Ricardo Wurmus
ccf2d49837
gnu: r-ucell: Update to 2.6.2.
* gnu/packages/bioconductor.scm (r-ucell): Update to 2.6.2.

Change-Id: Ie08960a237ad1515332794b23c2bd31e94299dfe
2023-12-15 17:47:41 +01:00
Ricardo Wurmus
be56597c9d
gnu: r-variancepartition: Update to 1.32.2.
* gnu/packages/bioconductor.scm (r-variancepartition): Update to 1.32.2.
[propagated-inputs]: Add r-matrixstats.

Change-Id: I436a1db36ad910aec0fac87150c62735f6509575
2023-12-15 17:47:41 +01:00
Ricardo Wurmus
bb64a047b4
gnu: r-flowworkspace: Update to 4.14.1.
* gnu/packages/bioconductor.scm (r-flowworkspace): Update to 4.14.1.

Change-Id: I2e950e77842add2eebeeffac2492ba0ef1aa6422
2023-12-15 17:47:40 +01:00
Ricardo Wurmus
2ab52103c9
gnu: r-xcms: Update to 4.0.1.
* gnu/packages/bioconductor.scm (r-xcms): Update to 4.0.1.

Change-Id: I98dd730bb959d2483164177a3e534915d13fee44
2023-12-15 17:47:40 +01:00
Ricardo Wurmus
e22fc284e3
gnu: r-genomicscores: Update to 2.14.2.
* gnu/packages/bioconductor.scm (r-genomicscores): Update to 2.14.2.

Change-Id: I00417ef0c2f9657ec39690baa52a1cd075fb69c6
2023-12-15 17:47:40 +01:00
Ricardo Wurmus
0d5917604c
gnu: r-dose: Update to 3.28.2.
* gnu/packages/bioconductor.scm (r-dose): Update to 3.28.2.
[propagated-inputs]: Remove r-hpo-db and r-mpo-db; add r-yulab-utils.

Change-Id: Ia29d318cac9b1e261fb89fc4d15f8b40ec3583f3
2023-12-15 17:47:40 +01:00