Ricardo Wurmus
|
611a255d2b
|
gnu: r-rhdf5: Update to 2.26.0.
* gnu/packages/bioinformatics.scm (r-rhdf5): Update to 2.26.0.
|
2018-11-07 12:27:16 +01:00 |
|
Ricardo Wurmus
|
a1c2bf8e54
|
gnu: r-rcas: Update to 1.8.0.
* gnu/packages/bioinformatics.scm (r-rcas): Update to 1.8.0.
[native-inputs]: Remove r-testthat and ghc-pandoc-citeproc.
[propagated-inputs]: Add r-annotationdbi, r-genomeinfodb, and r-genomicranges;
remove r-bsgenome-mmusculus-ucsc-mm9, r-bsgenome-celegans-ucsc-ce10,
r-bsgenome-dmelanogaster-ucsc-dm3, r-org-ce-eg-db, r-org-dm-eg-db, and
r-org-mm-eg-db.
|
2018-11-07 12:27:16 +01:00 |
|
Ricardo Wurmus
|
900ce2bafd
|
gnu: r-delayedmatrixstats: Update to 1.4.0.
* gnu/packages/bioinformatics.scm (r-delayedmatrixstats): Update to 1.4.0.
[propagated-inputs]: Add r-biocparallel and r-hdf5array.
|
2018-11-07 12:27:16 +01:00 |
|
Ricardo Wurmus
|
70a3a76ba7
|
gnu: r-scran: Update to 1.10.1.
* gnu/packages/bioinformatics.scm (r-scran): Update to 1.10.1.
[propagated-inputs]: Add r-biocneighbors; remove r-dt, r-fnn, r-ggplot2,
r-shiny, and r-viridis.
|
2018-11-07 12:27:16 +01:00 |
|
Ricardo Wurmus
|
48f2791496
|
gnu: r-scater: Update to 1.10.0.
* gnu/packages/bioinformatics.scm (r-scater): Update to 1.10.0.
[propagated-inputs]: Add r-biocparallel; remove r-biobase, r-data-table,
r-edger, r-limma, r-rhdf5, r-rjson, r-shiny, r-shinydashboard, and r-tximport.
|
2018-11-07 12:27:16 +01:00 |
|
Ricardo Wurmus
|
f93ec63ccf
|
gnu: r-singlecellexperiment: Update to 1.4.0.
* gnu/packages/bioinformatics.scm (r-singlecellexperiment): Update to 1.4.0.
|
2018-11-07 12:27:16 +01:00 |
|
Ricardo Wurmus
|
3c833608f3
|
gnu: r-beachmat: Update to 1.4.0.
* gnu/packages/bioinformatics.scm (r-beachmat): Update to 1.4.0.
[propagated-inputs]: Add r-biocgenerics.
|
2018-11-07 12:27:16 +01:00 |
|
Ricardo Wurmus
|
edb91244c3
|
gnu: r-qvalue: Update to 2.14.0.
* gnu/packages/bioinformatics.scm (r-qvalue): Update to 2.14.0.
|
2018-11-07 12:27:16 +01:00 |
|
Ricardo Wurmus
|
d055f199a9
|
gnu: r-hitc: Update to 1.26.0.
* gnu/packages/bioinformatics.scm (r-hitc): Update to 1.26.0.
|
2018-11-07 12:27:16 +01:00 |
|
Ricardo Wurmus
|
8023912934
|
gnu: r-fithic: Update to 1.8.0.
* gnu/packages/bioinformatics.scm (r-fithic): Update to 1.8.0.
|
2018-11-07 12:27:16 +01:00 |
|
Ricardo Wurmus
|
7468a76480
|
gnu: r-sushi: Update to 1.20.0.
* gnu/packages/bioinformatics.scm (r-sushi): Update to 1.20.0.
|
2018-11-07 12:27:16 +01:00 |
|
Ricardo Wurmus
|
85b16c05e8
|
gnu: r-gwascat: Update to 2.14.0.
* gnu/packages/bioinformatics.scm (r-gwascat): Update to 2.14.0.
|
2018-11-07 12:27:16 +01:00 |
|
Ricardo Wurmus
|
d57445c9b2
|
gnu: r-gviz: Update to 1.26.0.
* gnu/packages/bioinformatics.scm (r-gviz): Update to 1.26.0.
|
2018-11-07 12:27:16 +01:00 |
|
Ricardo Wurmus
|
ea55326dc7
|
gnu: r-gqtlstats: Update to 1.14.0.
* gnu/packages/bioinformatics.scm (r-gqtlstats): Update to 1.14.0.
|
2018-11-07 12:27:16 +01:00 |
|
Ricardo Wurmus
|
da679b5202
|
gnu: r-ldblock: Update to 1.12.0.
* gnu/packages/bioinformatics.scm (r-ldblock): Update to 1.12.0.
|
2018-11-07 12:27:16 +01:00 |
|
Ricardo Wurmus
|
4b91335566
|
gnu: r-erma: Update to 0.14.0.
* gnu/packages/bioinformatics.scm (r-erma): Update to 0.14.0.
|
2018-11-07 12:27:15 +01:00 |
|
Ricardo Wurmus
|
220ac15e3f
|
gnu: r-snpstats: Update to 1.32.0.
* gnu/packages/bioinformatics.scm (r-snpstats): Update to 1.32.0.
|
2018-11-07 12:27:15 +01:00 |
|
Ricardo Wurmus
|
181a843143
|
gnu: r-gqtlbase: Update to 1.14.0.
* gnu/packages/bioinformatics.scm (r-gqtlbase): Update to 1.14.0.
|
2018-11-07 12:27:15 +01:00 |
|
Ricardo Wurmus
|
f20c766413
|
gnu: r-ggbio: Update to 1.30.0.
* gnu/packages/bioinformatics.scm (r-ggbio): Update to 1.30.0.
|
2018-11-07 12:27:15 +01:00 |
|
Ricardo Wurmus
|
e7a0bc1ccf
|
gnu: r-biovizbase: Update to 1.30.0.
* gnu/packages/bioinformatics.scm (r-biovizbase): Update to 1.30.0.
|
2018-11-07 12:27:15 +01:00 |
|
Ricardo Wurmus
|
cdab2dcfea
|
gnu: r-organismdbi: Update to 1.24.0.
* gnu/packages/bioinformatics.scm (r-organismdbi): Update to 1.24.0.
[propagated-inputs]: Remove r-biocinstaller; add r-biocmanager.
|
2018-11-07 12:27:15 +01:00 |
|
Ricardo Wurmus
|
e8e78c4966
|
gnu: r-ensembldb: Update to 2.6.0.
* gnu/packages/bioinformatics.scm (r-ensembldb): Update to 2.6.0.
|
2018-11-07 12:27:15 +01:00 |
|
Ricardo Wurmus
|
0c96e4b290
|
gnu: r-dirichletmultinomial: Update to 1.24.0.
* gnu/packages/bioinformatics.scm (r-dirichletmultinomial): Update to 1.24.0.
|
2018-11-07 12:27:15 +01:00 |
|
Ricardo Wurmus
|
5ae5a8ebfc
|
gnu: r-complexheatmap: Update to 1.20.0.
* gnu/packages/bioinformatics.scm (r-complexheatmap): Update to 1.20.0.
|
2018-11-07 12:27:15 +01:00 |
|
Ricardo Wurmus
|
d78c6aca55
|
gnu: r-genomicfiles: Update to 1.18.0.
* gnu/packages/bioinformatics.scm (r-genomicfiles): Update to 1.18.0.
|
2018-11-07 12:27:15 +01:00 |
|
Ricardo Wurmus
|
122e099e72
|
gnu: r-gage: Update to 2.32.0.
* gnu/packages/bioinformatics.scm (r-gage): Update to 2.32.0.
|
2018-11-07 12:27:15 +01:00 |
|
Ricardo Wurmus
|
4984212786
|
gnu: r-keggrest: Update to 1.22.0.
* gnu/packages/bioinformatics.scm (r-keggrest): Update to 1.22.0.
|
2018-11-07 12:27:15 +01:00 |
|
Ricardo Wurmus
|
95df764c01
|
gnu: r-fastseg: Update to 1.28.0.
* gnu/packages/bioinformatics.scm (r-fastseg): Update to 1.28.0.
|
2018-11-07 12:27:15 +01:00 |
|
Ricardo Wurmus
|
147633d4c1
|
gnu: r-annotationhub: Update to 2.14.1.
* gnu/packages/bioinformatics.scm (r-annotationhub): Update to 2.14.1.
[propagated-inputs]: Remove r-biocinstaller; add r-biocmanager.
|
2018-11-07 12:27:15 +01:00 |
|
Ricardo Wurmus
|
d7ea34bf99
|
gnu: r-interactivedisplaybase: Update to 1.20.0.
* gnu/packages/bioinformatics.scm (r-interactivedisplaybase): Update to 1.20.0.
|
2018-11-07 12:27:15 +01:00 |
|
Ricardo Wurmus
|
b03951f26b
|
gnu: r-edaseq: Update to 2.16.0.
* gnu/packages/bioinformatics.scm (r-edaseq): Update to 2.16.0.
|
2018-11-07 12:27:15 +01:00 |
|
Ricardo Wurmus
|
7812e6b82e
|
gnu: r-deseq: Update to 1.34.0.
* gnu/packages/bioinformatics.scm (r-deseq): Update to 1.34.0.
|
2018-11-07 12:27:15 +01:00 |
|
Ricardo Wurmus
|
800954eba4
|
gnu: r-aroma-light: Update to 3.12.0.
* gnu/packages/bioinformatics.scm (r-aroma-light): Update to 3.12.0.
|
2018-11-07 12:27:15 +01:00 |
|
Ricardo Wurmus
|
675d91a035
|
gnu: r-msnid: Update to 1.16.0.
* gnu/packages/bioinformatics.scm (r-msnid): Update to 1.16.0.
|
2018-11-07 12:27:14 +01:00 |
|
Ricardo Wurmus
|
762aca7270
|
gnu: r-msnbase: Update to 2.8.0.
* gnu/packages/bioinformatics.scm (r-msnbase): Update to 2.8.0.
|
2018-11-07 12:27:14 +01:00 |
|
Ricardo Wurmus
|
73d7475246
|
gnu: r-pcamethods: Update to 1.74.0.
* gnu/packages/bioinformatics.scm (r-pcamethods): Update to 1.74.0.
|
2018-11-07 12:27:14 +01:00 |
|
Ricardo Wurmus
|
2c4311dc7c
|
gnu: r-mzid: Update to 1.20.0.
* gnu/packages/bioinformatics.scm (r-mzid): Update to 1.20.0.
|
2018-11-07 12:27:14 +01:00 |
|
Ricardo Wurmus
|
0e16fc4699
|
gnu: r-vsn: Update to 3.50.0.
* gnu/packages/bioinformatics.scm (r-vsn): Update to 3.50.0.
|
2018-11-07 12:27:14 +01:00 |
|
Ricardo Wurmus
|
2b085484c0
|
gnu: r-affy: Update to 1.60.0.
* gnu/packages/bioinformatics.scm (r-affy): Update to 1.60.0.
[propagated-inputs]: Remove r-biocinstaller; add r-biocmanager.
|
2018-11-07 12:27:14 +01:00 |
|
Ricardo Wurmus
|
511abd7add
|
gnu: r-affyio: Update to 1.52.0.
* gnu/packages/bioinformatics.scm (r-affyio): Update to 1.52.0.
|
2018-11-07 12:27:14 +01:00 |
|
Ricardo Wurmus
|
691ce09fd3
|
gnu: r-protgenerics: Update to 1.14.0.
* gnu/packages/bioinformatics.scm (r-protgenerics): Update to 1.14.0.
|
2018-11-07 12:27:14 +01:00 |
|
Ricardo Wurmus
|
8af8688339
|
gnu: r-sva: Update to 3.30.0.
* gnu/packages/bioinformatics.scm (r-sva): Update to 3.30.0.
|
2018-11-07 12:27:14 +01:00 |
|
Ricardo Wurmus
|
18604a76e4
|
gnu: r-methylkit: Update to 1.8.0.
* gnu/packages/bioinformatics.scm (r-methylkit): Update to 1.8.0.
|
2018-11-07 12:27:14 +01:00 |
|
Ricardo Wurmus
|
739a856db8
|
gnu: r-copywriter: Update to 2.14.0.
* gnu/packages/bioinformatics.scm (r-copywriter): Update to 2.14.0.
|
2018-11-07 12:27:14 +01:00 |
|
Ricardo Wurmus
|
2e9d8116fb
|
gnu: r-chipseq: Update to 1.32.0.
* gnu/packages/bioinformatics.scm (r-chipseq): Update to 1.32.0.
|
2018-11-07 12:27:14 +01:00 |
|
Ricardo Wurmus
|
cec8f0920b
|
gnu: r-annotationfilter: Update to 1.6.0.
* gnu/packages/bioinformatics.scm (r-annotationfilter): Update to 1.6.0.
|
2018-11-07 12:27:14 +01:00 |
|
Ricardo Wurmus
|
d2b60be596
|
gnu: r-tximport: Update to 1.10.0.
* gnu/packages/bioinformatics.scm (r-tximport): Update to 1.10.0.
|
2018-11-07 12:27:14 +01:00 |
|
Ricardo Wurmus
|
ad90921ddc
|
gnu: r-mutationalpatterns: Update to 1.8.0.
* gnu/packages/bioinformatics.scm (r-mutationalpatterns): Update to 1.8.0.
|
2018-11-07 12:27:14 +01:00 |
|
Ricardo Wurmus
|
338f860cc6
|
gnu: r-bamsignals: Update to 1.14.0.
* gnu/packages/bioinformatics.scm (r-bamsignals): Update to 1.14.0.
|
2018-11-07 12:27:14 +01:00 |
|
Ricardo Wurmus
|
48196899cd
|
gnu: r-rhtslib: Update to 1.14.0.
* gnu/packages/bioinformatics.scm (r-rhtslib): Update to 1.14.0.
|
2018-11-07 12:27:14 +01:00 |
|