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Author SHA1 Message Date
Ben Woodcroft
951da521a9
gnu: diamond: Update to 0.8.22. 
* gnu/packages/bioinformatics.scm (diamond): Update to 0.8.22.
 2016-09-22 16:36:00 +10:00
ng0
c5776c87bb
gnu: perl-io-socket-ssl: Update to 2.038. 
* gnu/packages/web.scm (perl-io-socket-ssl): Update to 2.038.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2016-09-22 01:44:50 -04:00
Leo Famulari
1df00601b2
gnu: irssi: Update to 0.8.20 [fixes CVE-2016-{7044,7045}]. 
* gnu/packages/irc.scm (irssi): Update to 0.8.20.
 2016-09-22 00:38:13 -04:00
Ricardo Wurmus
39162ee49b
gnu: extempore: Only build on x86_64. 
* gnu/packages/algebra.scm (kiss-fft-for-extempore)[supported-systems]:
Only build on x86_64.
* gnu/packages/gl.scm (nanovg-for-extempore)[supported-systems]:
Likewise.
* gnu/packages/image.scm (stb-image-for-extempore)[supported-systems]:
Likewise.
* gnu/packages/llvm.scm (llvm-for-extempore)[supported-systems]:
Likewise.
* gnu/packages/music.scm (portmidi-for-extempore)[supported-systems]:
Likewise.
(extempore)[supported-systems]: Likewise.
 2016-09-21 21:47:56 +02:00
Ricardo Wurmus
b78891b012
gnu: r-rmarkdown: Ensure temporary files can be deleted. 
* gnu/packages/statistics.scm (r-rmarkdown)[arguments]: Add phase
"copy-files-without-mode".
 2016-09-21 21:38:39 +02:00
Ricardo Wurmus
3f1c722ec7
gnu: r-htmltools: Ensure temporary files can be deleted. 
* gnu/packages/web.scm (r-htmltools)[arguments]: Add phase
"copy-files-without-mode".
 2016-09-21 21:38:39 +02:00
Efraim Flashner
538c0e3b69
gnu: openlibm: Remove support for mips. 
* gnu/packages/maths.scm (openlibm)[supported-systems]: New field,
remove support for mips64el.
 2016-09-21 22:36:52 +03:00
Efraim Flashner
6e8faf7794
gnu: jellyfish: Limit to x86_64. 
* gnu/packages/bioinformatics.scm (jellyfish)[supported-systems}: New
field, limit support to x86_64.
 2016-09-21 22:36:52 +03:00
ng0
f7fe5f7a3e
gnu: femtolisp: Remove custom "patch-makefile" phase. 
* gnu/packages/lisp.scm (femtolisp)[arguments]: Remove
"patch-makefile" phase; specify test target; build "release"
target instead of "default".
 2016-09-21 21:28:52 +02:00
Andreas Enge
171091a874
gnu: lm-sensors: Update to 3.4.0. 
* gnu/packages/linux.scm (lm-sensors): Update to 3.4.0.
 2016-09-21 19:20:22 +02:00
Ben Woodcroft
79558df220
gnu: vsearch: Update to 2.1.0. 
* gnu/packages/bioinformatics.scm (vsearch): Update to 2.1.0.
 2016-09-21 18:44:22 +10:00
Ben Woodcroft
375f224b68
gnu: python-click: Use 'pypi-uri'. 
* gnu/packages/python.scm (python-click, python2-click)[source]: Use
'pypi-uri'.
 2016-09-21 11:58:39 +10:00
Ben Woodcroft
e2ab5a0904
gnu: python-click: Hardlink path to 'locale'. 
* gnu/packages/python.scm (python-click, python2-click)[arguments]: New
field.
 2016-09-21 11:54:15 +10:00
Tobias Geerinckx-Rice
f75bb2c3f2
gnu: simple-scan: Update to 3.22.0.1. 
* gnu/packages/gnome.scm (simple-scan): Update to 3.22.0.1.
 2016-09-21 01:15:57 +02:00
Alex Vong
8824da4c8b
gnu: vlc: Use liba52. 
* gnu/packages/video.scm (vlc)[inputs]: Add liba52.
[arguments]: Remove "--disable-a52" from #:configure-flags.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2016-09-20 15:54:18 -04:00
Efraim Flashner
c84253f757
gnu: chez-scheme: Remove arm support. 
* gnu/packages/scheme.scm (chez-scheme)[supported-systems]: Remove arm.
 2016-09-20 22:04:15 +03:00
doncatnip
22037a327a
gnu: awesome: Update to 3.5.9. 
* gnu/packages/wm.scm (awesome): Update to 3.5.9.
[inputs]: Add gobject-introspection, lua-lgi, cairo. Use latest available lua.
[arguments]: Set lua search paths. Add cairo to LD_LIBRARY_PATH. Wrap binary in
respect to those paths plus GI_TYPELIB_PATH.
 2016-09-20 14:58:33 -04:00
doncatnip
03d8505f14
gnu: lua: Add lua-lgi. 
* gnu/packages/lua.scm (lua-lgi): New variable.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2016-09-20 14:58:32 -04:00
doncatnip
c0d47cadea
gnu: lua: Use MYCFLAGS instead of CFLAGS. 
* gnu/packages/lua.scm (lua)[arguments]: Use MYCFLAGS instead of
CFLAGS and remove conflicting -DLUA_USE_POSIX since -DLUA_USE_LINUX
is passed implicitly for build target "linux".

Signed-off-by: Leo Famulari <leo@famulari.name>
 2016-09-20 14:58:29 -04:00
Efraim Flashner
e6d58734b6
gnu: chess: Update to 6.2.3. 
* gnu/packages/games.scm (chess): Update to 6.2.3.
 2016-09-20 21:41:14 +03:00
Dylan Jeffers
b04a52a6ff
gnu: Add python-requests-oauthlib. 
* gnu/packages/python.scm (python-requests-oauthlib,
python2-requests-oauthlib): New variables.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2016-09-20 21:27:56 +03:00
John Darrington
be86b7adbc
gnu: Add bind 
* gnu/packags/dns.scm (bind): New variable, (bind-utils): Remove.
 2016-09-20 18:55:52 +02:00
Efraim Flashner
92330ba90d
gnu: efl: Remove hardcoding pulseaudio and libsndfile. 
* gnu/packages/enlightenment.scm (efl)[arguments]: Remove custom phase
to hardlink to the locations of pulseaudio and libsndfile.
 2016-09-20 11:32:08 +03:00
Mark H Weaver
846b2534df
gnu: emacs: Update to 25.1. 
* gnu/packages/emacs.scm (emacs): Update to 25.1.
 2016-09-19 23:45:25 -04:00
Mark H Weaver
6509a1e1e0
gnu: linux-libre: Update to 4.7.4. 
* gnu/packages/linux.scm (linux-libre)
(%linux-libre-version, %linux-libre-hash): Update to 4.7.4.
 2016-09-19 18:42:29 -04:00
Mark H Weaver
a8b9c575aa
gnu: linux-libre@4.4: Update to 4.4.21. 
* gnu/packages/linux.scm (linux-libre-4.4): Update to 4.4.21.
 2016-09-19 18:40:59 -04:00
Mark H Weaver
55ac38f986
gnu: linux-libre@4.1: Update to 4.1.33. 
* gnu/packages/linux.scm (linux-libre-4.1): Update to 4.1.33.
 2016-09-19 18:37:22 -04:00
Nicolas Goaziou
006a832ccb
gnu: emacs-org: Update to 20160912. 
* gnu/packages/emacs.scm (emacs-org): Update to 20160912.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2016-09-19 23:35:48 +03:00
Efraim Flashner
8120205ccd
gnu: python2-cov-core: Use strip-python2-variant. 
* gnu/packages/python.scm (python-cov-core)[properties]: New field,
declare python2-variant.
(python2-cov-core): Use strip-python2-variant.
 2016-09-19 23:25:01 +03:00
Leo Famulari
d404a6f971
gnu: gnupg: Fix test failure. 
* gnu/packages/patches/gnupg-fix-expired-test.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/gnupg.scm (gnupg): Use it.
 2016-09-19 16:09:56 -04:00
Hartmut Goebel
dfdaea32e9
gnu: python-django, python2-django: Fix propagated- and native-inputs. 
setuptools is a run-time dependency (sic!), all others are required
for testing only.

* gnu/packages/django.scm (python-django) [propagated-inputs,
  native-inputs]: Exchange them. Move tzdata to new native-inputs.
  Enhance comments.
  (python2-django) [propagated-inputs] change into native-inputs.
  Enhance comment.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2016-09-19 23:41:23 +09:00
Efraim Flashner
bf307a7a54
gnu: efl: Add recommended build flags. 
* gnu/packages/enlightenment.scm (efl)[inputs]: Add libwebp.
[arguments]: Add configure-flags to enable xinput22, image-loader-webp,
multisense, opengl with egl support.
 2016-09-19 15:46:34 +03:00
Efraim Flashner
5de2a99e79
gnu: efl: Update to 1.18.1. 
* gnu/packages/enlightenment.scm (efl): Update to 1.18.1.
 2016-09-19 15:46:33 +03:00
Efraim Flashner
6f27fbd807
gnu: ffmpeg@2.8: Update to 2.8.8. 
* gnu/packages/video.scm (ffmpeg@2.8): Update to 2.8.8.
 2016-09-19 15:46:26 +03:00
宋文武
6b87c10f58
gnu: Add Mr. Rescue. 
* gnu/packages/games.scm (mrrescue): New variable.
 2016-09-19 19:24:18 +08:00
Roel Janssen
eb24341ffb
gnu: Add r-biocinstaller. 
* gnu/packages/bioinformatics.scm (r-biocinstaller): New variable.
 2016-09-19 11:56:44 +02:00
ng0
c2c84add54
gnu: racket: Update to 6.6 
* gnu/packages/scheme.scm (racket): Update to 6.6.
 2016-09-19 11:53:30 +02:00
Ben Woodcroft
de96ea286d
gnu: python-biom-format: Move inputs to propagated-inputs. 
* gnu/packages/bioinformatics.scm (python-biom-format, python2-biom-format)
[inputs]: Move all from here ...
[propagated-inputs]: ... to here.
 2016-09-19 15:44:20 +10:00
Ben Woodcroft
7bba95b769
gnu: seqmagick: Use BioPython 1.66. 
* gnu/packages/bioinformatics.scm (seqmagick)[inputs]: Use
python2-biopython-1.66 instead of python2-biopython.
 2016-09-19 15:44:20 +10:00
Ben Woodcroft
4b1a152826
gnu: Add python2-biopython-1.66. 
* gnu/packages/bioinformatics.scm (python2-biopython-1.66): New variable.
 2016-09-19 15:44:20 +10:00
Ben Woodcroft
8c8da1389e
gnu: python-biopython: Use 'python2-variant'. 
* gnu/packages/bioinformatics.scm (python-biopython)[properties]: New field.
[native-inputs]: Remove field.
(python-biopython): Use 'strip-python-variant'.
 2016-09-19 15:44:20 +10:00
Ben Woodcroft
4ce6030588
gnu: python-biopython: Update to 1.68. 
* gnu/packages/bioinformatics.scm (python-biopython): Update to 1.68.
[arguments]: New field.
 2016-09-19 15:44:18 +10:00
Nicolas Goaziou
ded5d02bd0
gnu: wireshark: Update to 2.2.0. 
* gnu/packages/networking.scm (wireshark): Update to 2.2.0.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2016-09-18 21:03:48 -04:00
Efraim Flashner
c4605e4c97
gnu: onionshare: Fix build. 
This commit is a follow-up to b8ea5204ab.

* gnu/packages/tor.scm: Add 'gpl3+' to guix-licenses import, Add
python-build-system.
(onionshare)[licenses]: Remove license namespace.
 2016-09-18 23:27:36 +03:00
Efraim Flashner
b8ea5204ab
gnu: Add onionshare. 
* gnu/packages/tor.scm (onionshare): New variable.
* gnu/packages/patches/onionshare-fix-install-paths.patch: New variable.
* gnu/local.mk (dist_patch_DATA): Add it.
 2016-09-18 23:19:46 +03:00
Efraim Flashner
d488d5d65b
gnu: Add python-nautilus. 
* gnu/packages/python.scm (python-nautilus): New variable.
 2016-09-18 23:19:46 +03:00
Efraim Flashner
153e58c568
gnu: Add python-bcrypt. 
* gnu/packages/password-utils.scm (python-bcrypt): New variable.
 2016-09-18 23:19:46 +03:00
Efraim Flashner
0aea283a65
gnu: Add python-nose2. 
* gnu/packages/python.scm (python-nose2): New variable.
 2016-09-18 23:19:45 +03:00
Efraim Flashner
12f839fdf6
gnu: Add python-cov-core. 
* gnu/packages/python.scm (python-cov-core): New variable.
 2016-09-18 23:19:45 +03:00
Efraim Flashner
257023978a
gnu: Add python-consul. 
* gnu/packages/python.scm (python-consul): New variable.
 2016-09-18 23:19:45 +03:00