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Author SHA1 Message Date
Leo Famulari
14dbab425a
gnu: imagemagick: Update to 6.9.8-4. 
* gnu/packages/imagemagick.scm (imagemagick): Update to 6.9.8-4.
 2017-05-03 00:11:44 -04:00
Danny Milosavljevic
06110559bb
gnu: build: file-systems: Add ISO-9660. 
Fixes <https://bugs.gnu.org/26751>.

* gnu/build/file-systems.scm (iso9660-superblock?,
read-iso9660-primary-volume-descriptor, read-iso9660-superblock,
iso9660-superblock-uuid, iso9660-uuid->string,
iso9660-superblock-volume-name): New variables.
(%partition-label-readers): Add iso9660.
(%partition-uuid-readers): Add iso9660.
 2017-05-03 00:18:33 +02:00
Petter
2f3108ad03
gnu: Avoid circular dependencies by Perl license. 
* guix/licenses.scm (perl-license): New variable.
* gnu/packages/bioinformatics.scm: Change (package-license perl) to perl-license.
* gnu/packages/compression.scm: Same.
* gnu/packages/databases.scm: Same.
* gnu/packages/gd.scm: Same.
* gnu/packages/language.scm: Same.
* gnu/packages/libevent.scm: Same.
* gnu/packages/mail.scm: Same.
* gnu/packages/messaging.scm: Same.
* gnu/packages/ncurses.scm: Same.
* gnu/packages/networking.scm: Same.
* gnu/packages/photo.scm: Same.
* gnu/packages/tcl.scm: Same.
* gnu/packages/tex.scm: Same.
* gnu/packages/tls.scm: Same.
* gnu/packages/web.scm: Same.
* gnu/packages/wm.scm: Same.
* gnu/packages/xml.scm: Same.
* gnu/packages/xorg.scm: Same.
* gnu/packages/zip.scm: Same.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-05-02 23:41:14 +02:00
Tobias Geerinckx-Rice
beba0c09b9
gnu: youtube-dl: Update to 2017.05.01. 
* gnu/packages/video.scm (youtube-dl): Update to 2017.05.01.
 2017-05-02 23:35:59 +02:00
Tobias Geerinckx-Rice
8a1bb37817
gnu: hdparm: Update to 9.52. 
* gnu/packages/linux.scm (hdparm): Update to 9.52.
 2017-05-02 23:35:24 +02:00
Danny Milosavljevic
7e16478f18
gnu: Add python-mwclient. 
Fixes <https://bugs.gnu.org/26744>.

* gnu/packages/python.scm (python-mwclient, python2-mwclient): New variables.
 2017-05-02 22:21:36 +02:00
Danny Milosavljevic
1aecfe176a
gnu: python-pytest-cov: Update to 2.4.0. 
Fixes <https://bugs.gnu.org/26743>.

* gnu/packages/python.scm (python-pytest-cov): Update to 2.4.0.
 2017-05-02 22:20:44 +02:00
Efraim Flashner
341ccb0f3b
gnu: obs: Update to 18.0.2. 
* gnu/packages/video.scm (obs): Update to 18.0.2.
 2017-05-02 22:24:34 +03:00
Ludovic Courtès
4aabc8eaa2
build: Install gnu/build/svg.scm. 
Fixes a regression introduced in
commit 960887b297.

* Makefile.am (MODULES_NOT_COMPILED): New variable.
(nobase_dist_guilemodule_DATA): Add $(MODULES_NOT_COMPILED).
(EXTRA_DIST): Remove gnu/build/svg.scm.
* gnu/local.mk (MODULES_NOT_COMPILED): New variable.
 2017-05-02 15:44:35 +02:00
Ludovic Courtès
693f12ce23
build: 'check-system' now depends on the bootstrap Guile tarballs. 
Reported by Chris Marusich <cmmarusich@gmail.com>.

* gnu/local.mk (BOOTSTRAP_GUILE_TARBALLS): New variable.
(DISTCLEANFILES): Define as an alias for 'BOOTSTRAP_GUILE_TARBALLS'.
* Makefile.am (check-system): Depend on $(BOOTSTRAP_GUILE_TARBALLS).
 2017-05-02 15:10:05 +02:00
Ludovic Courtès
49f9d7f697
services: nscd: Create /etc/resolv.conf if it does not exist. 
* gnu/services/base.scm (nscd-activation): Create /etc/resolv.conf if it
does not exist yet.
 2017-05-02 12:32:52 +02:00
Ludovic Courtès
1fd0fc0db4
gnu: parallel: Update to 20170422. 
* gnu/packages/parallel.scm (parallel): Update to 20170422.
 2017-05-02 12:32:52 +02:00
Ludovic Courtès
915d7792ac
gnu: ocrad: Update to 0.26. 
* gnu/packages/ocr.scm (ocrad): Update to 0.26.
 2017-05-02 12:32:52 +02:00
Ludovic Courtès
5c6b6827e9
gnu: libiconv: Update to 1.15. 
* gnu/packages/base.scm (libiconv): Update to 1.15.
 2017-05-02 12:32:52 +02:00
Ludovic Courtès
ebc4b6e0cf
gnu: less: Update to 487. 
* gnu/packages/less.scm (less): Update to 487.
 2017-05-02 12:32:52 +02:00
Ludovic Courtès
005375f53b
gnu: acct: Update to 6.6.3. 
* gnu/packages/acct.scm (acct): Update to 6.6.3.
 2017-05-02 12:32:52 +02:00
Ludovic Courtès
20832afbf2
gnu: emacs-emms: Update to 4.3. 
* gnu/packages/emacs.scm (emms): Update to 4.3.
 2017-05-02 12:32:51 +02:00
Mark H Weaver
7020a6ab8b
gnu: ghostscript: Fix grafting of ghostscript/x and ghostscript/cups. 
* gnu/packages/cups.scm (ghostscript/cups): Use package/inherit.
* gnu/packages/ghostscript.scm (ghostscript/x): Use package/inherit.
(ghostscript/fixed)[replacement]: Override to #f.
 2017-05-02 04:19:11 -04:00
Mark H Weaver
ee3401d018
gnu: icecat: Add more fixes from upstream mozilla-esr52. 
* gnu/packages/gnuzilla.scm (icecat)[source]: Add selected fixes from the
upstream mozilla-esr52 repository.
 2017-05-02 04:19:03 -04:00
Danny Milosavljevic
6e7302e93b
gnu: Add python-flask-oidc. 
Fixes <https://bugs.gnu.org/26731>.

* gnu/packages/python.scm (python-flask-oidc): New variable.
 2017-05-02 09:27:18 +02:00
Danny Milosavljevic
f3f8d159c3
gnu: Add python-oauth2client. 
* gnu/packages/python.scm (python-oauth2client): New variable.
 2017-05-02 09:27:17 +02:00
Mark H Weaver
60c9e80444
gnu: linux-libre: Update to 4.11. 
* gnu/packages/linux.scm (%linux-libre-version): Update to 4.11.
(%linux-libre-hash): Update hash.
* gnu/packages/aux-files/linux-libre/4.10-i686.conf,
gnu/packages/aux-files/linux-libre/4.10-x86_64.conf: Delete files.
* gnu/packages/aux-files/linux-libre/4.11-i686.conf,
gnu/packages/aux-files/linux-libre/4.11-x86_64.conf: New files.
* Makefile.am (AUX_FILES): Adjust accordingly.
 2017-05-01 21:48:15 -04:00
Brendan Tildesley
f3744a01e6
gnu: Add font-cns11643-swjz. 
* gnu/packages/fonts.scm (font-cns11643-swjz): New variable.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
 2017-05-02 00:58:32 +02:00
Brendan Tildesley
840b713613
gnu: Add font-cns11643. 
* gnu/packages/fonts.scm (font-cns11643): New variable.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
 2017-05-02 00:14:20 +02:00
Christopher Baines
99aa2dce5d
gnu: Add tailon. 
* gnu/packages/logging.scm (tailon): New variable.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
 2017-05-01 23:59:29 +02:00
Christopher Baines
6fdeb324a0
gnu: python-tornado: Update to 4.5.1. 
* gnu/packages/python.scm (python-tornado): Update to 4.5.1.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
 2017-05-01 23:59:22 +02:00
Christopher Baines
e537c917e8
gnu: Add python-sockjs-tornado. 
* gnu/packages/python.scm (python-sockjs-tornado): New variable.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
 2017-05-01 23:59:15 +02:00
Mark H Weaver
dd5bb841bf
Revert "gnu: linux-libre: Update to 4.11." 
This reverts commit cfd2ca8244.
 2017-05-01 17:38:34 -04:00
Leo Famulari
1c4a500aae
gnu: libsndfile: Fix CVE-2017-{8361,8362,8363,8365}. 
* gnu/packages/patches/libsndfile-CVE-2017-8361-8363-8365.patch,
gnu/packages/patches/libsndfile-CVE-2017-8362.patch: New files.
* gnu/local.mk (dist_patch_DATA): Add them.
* gnu/packages/pulseaudio.scm (libsndfile)[replacement]: New field.
(libsndfile/fixed): New variable.
 2017-05-01 15:52:58 -04:00
Clément Lassieur
d5b091290d
gnu: font-bitstream-vera: Change license to fsdg-compatible. 
This license is not X11-style because of its clause that makes it non-free.

* gnu/packages/fonts.scm (font-bitstream-vera)[license]: Change to
fsdg-compatible Bitstream Vera.
 2017-05-01 21:32:16 +02:00
Leo Famulari
78df8948c8
gnu: bitcoin-core: Update to 0.14.1. 
* gnu/packages/finance.scm (bitcoin-core): Update to 0.14.1.
 2017-05-01 14:47:59 -04:00
Leo Famulari
116ac0582c
gnu: linux-libre@4.4: Update to 4.4.65. 
* gnu/packages/linux.scm (linux-libre-4.4): Update to 4.4.65.
 2017-05-01 13:39:59 -04:00
Mathieu Othacehe
cfd2ca8244
gnu: linux-libre: Update to 4.11. 
* gnu/packages/linux.scm (%linux-libre-version): Update to 4.11.
(%linux-libre-hash): Update hash.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2017-05-01 13:39:59 -04:00
Maxim Cournoyer
e93793059d
gnu: python2-urwid: Disable vterm tests. 
* gnu/packages/python.scm (python2-urwid)['delete-test_vterm]: Add phase to
delete problematic test modules.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-05-01 17:28:20 +02:00
Ludovic Courtès
e30c2be10d
packages: Remove support for PACKAGE-VERSION deprecated syntax. 
This syntax had been deprecated since 2016-02-28.

* gnu/packages.scm (%find-package): Remove #:fallback? parameter and handling.
* tests/guix-build.sh: Remove test for "time-1.7" syntax.
* doc/guix.texi (Invoking guix lint): Update 'guix lint' output in example.
 2017-05-01 17:27:54 +02:00
Roel Janssen
f432254237
gnu: vcftools: Update to 0.1.15. 
* gnu/packages/bioinformatics.scm (vcftools): Update to 0.1.15.
 2017-05-01 16:18:39 +02:00
Julien Lepiller
fa936915ce
gnu: services: nginx: Fix key verification. 
* gnu/services/web.scm (default-nginx-server-config): Fix wrong variable name.
 2017-05-01 10:12:49 +02:00
Julien Lepiller
5a10cd4736
gnu: services: Create logs directory. 
* gnu/services/web.scm (nginx-activation): Create logs directory so nginx can
log its startup messages before it loads its configuration.
 2017-05-01 09:57:03 +02:00
Julien Lepiller
0f4740f4fa
gnu: services: nginx: Test certificate presence. 
* gnu/services/web.scm (default-nginx-server-config): Test certificate
presence when https is requested at configure time.
 2017-05-01 09:56:57 +02:00
ng0
9416112ed2
gnu: neomutt: Update to 20170428. 
* gnu/packages/mail.scm (neomutt): Update to 20170428.

Signed-off-by: Kei Kebreau <kei@openmailbox.org>
 2017-04-30 19:27:44 -04:00
Mathieu Othacehe
dd69ff6d45
gnu: emacs-mu4e-alert: Update to 1.0. 
* gnu/packages/emacs.scm (emacs-mu4e-alert): Update to 1.0.

Signed-off-by: Kei Kebreau <kei@openmailbox.org>
 2017-04-30 19:23:18 -04:00
Danny Milosavljevic
7cf06d62bf
gnu: Add gcc-vc4. 
Fixes <https://bugs.gnu.org/26541>.

* gnu/packages/bootstrap.scm (glibc-dynamic-linker): Add vc4-elf.
* gnu/packages/embedded.scm (gcc-vc4): New variable.
 2017-05-01 01:14:27 +02:00
Mathieu Othacehe
b3542d77fe
gnu: guile-git: Update to revision 2. 
* gnu/packages/guile.scm (guile-git): Update to revision 2.
[arguments]: remove "ccache -> site-ccache" substitution because it
has been ported upstream.

Signed-off-by: Kei Kebreau <kei@openmailbox.org>
 2017-04-30 19:07:09 -04:00
Leo Famulari
4d31d14397
gnu: python-llfuse: Update to 1.2. 
* gnu/packages/python.scm (python-llfuse, python2-llfuse): Update to 1.2.
 2017-04-30 17:15:37 -04:00
Leo Famulari
436c05586e
gnu: fuse: Update to 2.9.7. 
* gnu/packages/linux.scm (fuse): Update to 2.9.7.
 2017-04-30 17:15:36 -04:00
Leo Famulari
68f12ea0d2
gnu: radicale: Update to 1.1.2 [fixes CVE-2017-8342]. 
* gnu/packages/dav.scm (radicale): Update to 1.1.2.
 2017-04-30 16:50:08 -04:00
Leo Famulari
fbaf9376f6
Revert "gnu: Move netsurf to web-browsers.scm." 
This change caused building Guix to fail with:

 393: 1 [eval #<memoized glib-or-gtk-build-system> (# "3.6" "netsurf" . #)]

This reverts commit a39ee1accb.
 2017-04-30 15:08:59 -04:00
Kei Kebreau
a39ee1accb
gnu: Move netsurf to web-browsers.scm. 
* gnu/packages/web.scm: Move netsurf...
* gnu/packages/web-browsers.scm: ...here.
 2017-04-30 14:11:16 -04:00
Ricardo Wurmus
c2e4f14ac8
gnu: glibc/linux: Fix build of glibc-intermediate. 
This is a follow-up to commit b2fd8f6367.

* gnu/packages/base.scm (glibc/linux)[arguments]: Take patch from either
native-inputs or just inputs; fix syntax error; report errors on patch
failure.
 2017-04-30 13:01:20 +02:00
Efraim Flashner
dc00f63527
gnu: femtolisp: Remove aarch64-linux from supported-architectures. 
* gnu/packages/lisp.scm (femtolisp)[supported-systems]: Remove
aarch64-linux from supported-systems.
 2017-04-30 13:03:09 +03:00
Thomas Danckaert
300200b637
gnu: Add netcdf-fortran. 
* gnu/packages/maths.scm (netcdf-fortran): New variable.
 2017-04-30 11:50:50 +02:00
Efraim Flashner
06be316111
gnu: jemalloc: Disable transparent huge pages on non-Intel systems. 
* gnu/packages/jemalloc.scm (jemalloc)[arguments]: On non-Intel systems
add '--disable-thp' to #:configure-flags. Adjust #:phases to remove
offending test which incorrectly tests transparent huge pages.
 2017-04-30 11:04:38 +03:00
Christopher Allan Webber
b9ce9eca23
python-sphinxcontrib-programoutput: Update to 0.10. 
* gnu/packages/python.scm (python-sphinxcontrib-programoutput): Update to 0.10.
 2017-04-29 18:50:53 -05:00
Marius Bakke
564324f457
gnu: xapian: Update to 1.4.4. 
* gnu/packages/search.scm (xapian): Update to 1.4.4.
 2017-04-29 23:50:57 +02:00
Ricardo Wurmus
b2fd8f6367
gnu: glibc/linux: Fix runtime crashes on i686 systems. 
* gnu/packages/patches/glibc-memchr-overflow-i686.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/commencement.scm (glibc-final-with-bootstrap-bash)[native-inputs]:
Add the patch conditionally for i686 systems.
* gnu/packages/base.scm (glibc/linux)[native-inputs]: Add the patch
conditionally for i686 systems.
[arguments]: Apply the patch conditionally on i686 systems.
 2017-04-29 23:31:35 +02:00
Efraim Flashner
e18e17ea4e
gnu: lsof: Update to 4.89. 
* gnu/packages/lsof.scm (lsof): Update to 4.89.
 2017-04-29 23:41:06 +03:00
Efraim Flashner
4ae3549f7c
gnu: lsof: Shorten 'install phase. 
* gnu/packages/lsof.scm (lsof)[arguments]: Use 'install-file during the
'install phase.
 2017-04-29 23:41:05 +03:00
Efraim Flashner
b6ea329a32
gnu: lsof: Use 'modify-phases' syntax. 
* gnu/packages/lsof.scm (lsof)[arguments]: Use 'modify-phases' syntax.
 2017-04-29 23:25:22 +03:00
Efraim Flashner
d5fa9fd1fe
gnu: lsof: Add to mirror list. 
* gnu/packages/lsof.scm (lsof)[source]: Add to mirror list.
 2017-04-29 23:20:47 +03:00
Efraim Flashner
90f83099e8
gnu: r-genomeinfodbdata: Fix source url. 
* gnu/packages/bioinformatics.scm (r-genomeinfodbdata)[source]: Use
source uri and not bioconductor-uri shortener.
 2017-04-29 22:53:43 +03:00
Leo Famulari
86f48a8dbf
gnu: freetype: Fix CVE-2017-{8105,8287}. 
* gnu/packages/patches/freetype-CVE-2017-8105.patch,
gnu/packages/patches/freetype-CVE-2017-8287.patch: New files.
* gnu/local.mk (dist_patch_DATA): Add them.
* gnu/packages/fontutils.scm (freetype)[replacement]: New field.
(freetype/fixed): New variable.
 2017-04-29 12:14:03 -04:00
Julien Lepiller
e24d527131
gnu: ocaml-qtest: Use ocaml-qcheck. 
* gnu/packages/ocaml.scm (ocaml-qtest)[propagated-inputs]: Add ocaml-qcheck.
 2017-04-29 17:51:49 +02:00
Julien Lepiller
2c6ef0dd3b
gnu: Add ocaml-qcheck. 
* gnu/packages/ocaml.scm (ocaml-qcheck): New variable.
 2017-04-29 17:51:27 +02:00
Danny Milosavljevic
0660d3276c
gnu: python-openid: Fix package. 
Fixes <https://bugs.gnu.org/26692>.

* gnu/packages/python.scm (python-openid)[arguments]: Replace 'check phase.
[propagated-inputs]: Add python-defusedxml.
[native-inputs]: Add python-psycopg2, python-django.
 2017-04-29 10:52:55 +02:00
Leo Famulari
45fe973645
gnu: ghostscript-with-cups: Avoid inheriting replacement field. 
This is a followup to commit a01f15759a.

* gnu/packages/cups.scm (ghostscript/cups)[replacement]: New field.
 2017-04-29 01:16:57 -04:00
Tobias Geerinckx-Rice
a7c61512e4
gnu: radeontop: Update to 1.0. 
* gnu/packages/linux.scm (radeontop): Update to 1.0.
[inputs]: Add libxcb.
 2017-04-29 01:03:02 +02:00
Leo Famulari
a01f15759a
gnu: ghostscript: Fix CVE-2017-8291. 
* gnu/packages/patches/ghostscript-CVE-2017-8291.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/ghostscript.scm (ghostscript)[replacement]: New field.
(ghostscript/fixed): New variable.
(ghostscript-with-x)[replacement]: New field.
 2017-04-28 17:02:42 -04:00
Arun Isaac
73749ae9f1
gnu: youtube-dl: Update to 2017.04.28. 
* gnu/packages/video.scm (youtube-dl): Update to 2017.04.28.
 2017-04-28 22:06:58 +05:30
Ricardo Wurmus
162a4a0323
gnu: Add enigma. 
* gnu/packages/games.scm (enigma): New variable.
 2017-04-28 17:46:39 +02:00
Ricardo Wurmus
d00d6cea66
gnu: Add xerces-c. 
* gnu/packages/xml.scm (xerces-c): New variable.
 2017-04-28 17:46:39 +02:00
Kei Kebreau
8832c96340
gnu: schismtracker: Update to 20170420. 
* gnu/packages/music.scm (schismtracker): Update to 20170420.
 2017-04-28 11:34:13 -04:00
David Thompson
0cb9fba3dc
gnu: awscli: Add python-pyyaml input. 
Without this input, 'aws ec2 import-key-pair' doesn't work.

* gnu/packages/python.scm (awscli)[propagated-inputs]: Add python-pyyaml.
 2017-04-28 09:20:37 -04:00
宋文武
28172178b1
gnu: virt-manager: Update to 1.4.1. 
* gnu/packages/qemu.scm (virt-manager): Update to 1.4.1.
 2017-04-28 21:01:01 +08:00
宋文武
9271dfddc9
gnu: python-libvirt: Update to 3.2.0. 
* gnu/packages/qemu.scm (python-libvirt, python2-libvirt): Update to 3.2.0.
 2017-04-28 20:53:15 +08:00
宋文武
c3c0316215
gnu: libvirt-glib: Update to 1.0.0. 
* gnu/packages/qemu.scm (libvirt-glib): Update to 1.0.0.
 2017-04-28 20:23:56 +08:00
宋文武
52caf4b9fd
gnu: libvirt: Update to 3.2.0. 
* gnu/packages/qemu.scm (libvirt): Update to 3.2.0.
 2017-04-28 20:19:20 +08:00
Roel Janssen
4646a79c65
gnu: r-preprocesscore: Update to 1.38.0. 
* gnu/packages/statistics.scm (r-preprocesscore): Update to 1.38.0.
 2017-04-28 11:05:43 +02:00
Roel Janssen
524bfe2dbf
gnu: r-msnid: Update to 1.10.0. 
* gnu/packages/bioinformatics.scm (r-msnid): Update to 1.10.0.
 2017-04-28 11:05:42 +02:00
Roel Janssen
82359c72cb
gnu: r-msnbase: Update to 2.2.0. 
* gnu/packages/bioinformatics.scm (r-msnbase): Update to 2.2.0.
 2017-04-28 11:05:41 +02:00
Roel Janssen
5bfa6e090d
gnu: r-pcamethods: Update to 1.68.0. 
* gnu/packages/bioinformatics.scm (r-pcamethods): Update to 1.68.0.
 2017-04-28 11:05:40 +02:00
Roel Janssen
63bf2102cd
gnu: r-mzid: Update to 1.14.0. 
* gnu/packages/bioinformatics.scm (r-mzid): Update to 1.14.0.
 2017-04-28 11:05:38 +02:00
Roel Janssen
60c08b2ff4
gnu: r-vsn: Update to 3.44.0. 
* gnu/packages/bioinformatics.scm (r-vsn):
[source]: Update to 3.44.0,
[propagated-inputs]: Add r-hexbin.
 2017-04-28 11:05:37 +02:00
Roel Janssen
bd3cc4cc52
gnu: r-affy: Update to 1.54.0. 
* gnu/packages/bioinformatics.scm (r-affy): Update to 1.54.0.
 2017-04-28 11:05:37 +02:00
Roel Janssen
71abcc4cbf
gnu: r-affyio: Update to 1.46.0. 
* gnu/packages/bioinformatics.scm (r-affyio): Update to 1.46.0.
 2017-04-28 11:05:36 +02:00
Roel Janssen
e440ad6d4f
gnu: r-mzr: Update to 2.10.0. 
* gnu/packages/bioinformatics.scm (r-mzr): Update to 2.10.0.
 2017-04-28 11:05:35 +02:00
Roel Janssen
5b1337cc60
gnu: r-protgenerics: Update to 1.8.0. 
* gnu/packages/bioinformatics.scm (r-protgenerics): Update to 1.8.0.
 2017-04-28 11:05:33 +02:00
Roel Janssen
1d09d017db
gnu: r-sva: Update to 3.24.0. 
* gnu/packages/bioinformatics.scm (r-sva): Update to 3.24.0.
 2017-04-28 11:05:20 +02:00
Roel Janssen
d52d2d623a
gnu: r-copywriter: Update to 2.8.0. 
* gnu/packages/bioinformatics.scm (r-copywriter): Update to 2.8.0.
 2017-04-28 11:05:19 +02:00
Roel Janssen
7d72f2a803
gnu: r-chipseq: Update to 1.26.0. 
* gnu/packages/bioinformatics.scm (r-chipseq): Update to 1.26.0.
 2017-04-28 11:05:18 +02:00
Roel Janssen
04049a5f2c
gnu: r-rhdf5: Update to 2.20.0. 
* gnu/packages/bioinformatics.scm (r-rhdf5): Update to 2.20.0.
 2017-04-28 11:05:18 +02:00
Roel Janssen
ff58a1af98
gnu: r-tximport: Update to 1.4.0. 
* gnu/packages/bioinformatics.scm (r-tximport): Update to 1.4.0.
 2017-04-28 11:05:16 +02:00
Roel Janssen
cf4ac4e465
gnu: r-mutationalpatterns: Update to 1.2.0. 
* gnu/packages/bioinformatics.scm (r-mutationalpatterns):
[source]: Update to 1.2.0,
[propagated-inputs]: Add r-bsgenome-hsapiens-1000genomes-hs37d5,
  r-bsgenome-hsapiens-ucsc-hg19.
 2017-04-28 11:05:13 +02:00
Roel Janssen
ccd2aade98
gnu: r-bamsignals: Update to 1.8.0. 
* gnu/packages/bioinformatics.scm (r-bamsignals): Update to 1.8.0.
 2017-04-28 11:05:12 +02:00
Roel Janssen
37631ddc28
gnu: r-rhtslib: Update to 1.8.0. 
* gnu/packages/bioinformatics.scm (r-rhtslib): Update to 1.8.0.
 2017-04-28 11:05:11 +02:00
Roel Janssen
8444f6067a
gnu: r-zlibbioc: Update to 1.22.0. 
* gnu/packages/bioinformatics.scm (r-zlibbioc): Update to 1.22.0.
 2017-04-28 11:05:10 +02:00
Roel Janssen
a7b90ea990
gnu: r-motifrg: Update to 1.20.0. 
* gnu/packages/bioinformatics.scm (r-motifrg): Update to 1.20.0.
 2017-04-28 11:05:09 +02:00
Roel Janssen
0fce7d9be5
gnu: r-seqlogo: Update to 1.42.0. 
* gnu/packages/bioinformatics.scm (r-seqlogo): Update to 1.42.0.
 2017-04-28 11:05:08 +02:00
Roel Janssen
3ae82c8dfe
gnu: r-genomation: Update to 1.8.0. 
* gnu/packages/bioinformatics.scm (r-genomation): Update to 1.8.0.
 2017-04-28 11:05:07 +02:00
Roel Janssen
08b9224d2d
gnu: r-seqpattern: Update to 1.8.0. 
* gnu/packages/bioinformatics.scm (r-seqpattern): Update to 1.8.0.
 2017-04-28 11:05:06 +02:00
Roel Janssen
5999359f56
gnu: r-impute: Update to 1.50.0. 
* gnu/packages/bioinformatics.scm (r-impute): Update to 1.50.0.
 2017-04-28 11:05:06 +02:00