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Author SHA1 Message Date
Mark H Weaver
6c693a6e3f
gnu: linux-libre@4.19: Update to 4.19.86. 
* gnu/packages/linux.scm (linux-libre-4.19-version): Update to 4.19.86.
(linux-libre-4.19-pristine-source): Update hash.
 2019-11-25 12:08:09 -05:00
Mark H Weaver
79832fb285
gnu: linux-libre@4.14: Update to 4.14.156. 
* gnu/packages/linux.scm (linux-libre-4.14-version): Update to 4.14.156.
(linux-libre-4.14-pristine-source): Update hash.
 2019-11-25 12:08:02 -05:00
Alex Griffin
377606238f
gnu: Add netcat-openbsd. 
* gnu/packages/admin.scm (netcat-openbsd): New variable.
 2019-11-25 09:43:38 -06:00
Ricardo Wurmus
dae3458cd2
gnu: r-rrcov: Update to 1.4-9. 
* gnu/packages/statistics.scm (r-rrcov): Update to 1.4-9.
 2019-11-25 15:25:10 +01:00
Ricardo Wurmus
166995af92
gnu: r-future: Update to 1.15.1. 
* gnu/packages/cran.scm (r-future): Update to 1.15.1.
 2019-11-25 15:25:10 +01:00
Ricardo Wurmus
0ee5e9fb75
gnu: r-epi: Update to 2.40. 
* gnu/packages/cran.scm (r-epi): Update to 2.40.
 2019-11-25 15:25:10 +01:00
Ricardo Wurmus
b674f87a46
gnu: r-vioplot: Update to 0.3.3. 
* gnu/packages/cran.scm (r-vioplot): Update to 0.3.3.
 2019-11-25 15:25:10 +01:00
Jan Nieuwenhuizen
2baed64291
gnu: mes: Update to 0.21. 
* gnu/packages/mes.scm (mes): Update to 0.21.
 2019-11-25 14:33:27 +01:00
Ricardo Wurmus
b5d4d5b9bc
gnu: guile-gi: Update to 0.2.1. 
* gnu/packages/guile-xyz.scm (guile-gi): Update to 0.2.1.
[arguments]: Add phase to start Xorg server for tests.
[native-inputs]: Add xorg-server.
 2019-11-25 14:05:39 +01:00
Ricardo Wurmus
ea2884c12c
gnu: Add bsequencer. 
* gnu/packages/music.scm (bsequencer): New variable.
 2019-11-25 14:05:39 +01:00
Ricardo Wurmus
19600e0810
gnu: r-bookdown: Update to 0.16. 
* gnu/packages/cran.scm (r-bookdown): Update to 0.16.
 2019-11-25 14:05:38 +01:00
Ricardo Wurmus
401cc85e61
gnu: r-protviz: Update to 0.5.1. 
* gnu/packages/cran.scm (r-protviz): Update to 0.5.1.
[inputs]: Remove perl and python-2.
 2019-11-25 14:05:38 +01:00
Ricardo Wurmus
138fbdf354
gnu: r-rnifti: Update to 1.0.0. 
* gnu/packages/cran.scm (r-rnifti): Update to 1.0.0.
 2019-11-25 14:05:38 +01:00
Ricardo Wurmus
2eff036278
gnu: r-tidytree: Update to 0.3.0. 
* gnu/packages/cran.scm (r-tidytree): Update to 0.3.0.
 2019-11-25 14:05:38 +01:00
Ricardo Wurmus
3356eb511c
gnu: r-sjplot: Update to 2.8.0. 
* gnu/packages/cran.scm (r-sjplot): Update to 2.8.0.
[propagated-inputs]: Remove r-broom and r-nlme; add r-effectsize and
r-parameters.
 2019-11-25 14:05:38 +01:00
Ricardo Wurmus
10faf81097
gnu: r-tidyverse: Update to 1.3.0. 
* gnu/packages/cran.scm (r-tidyverse): Update to 1.3.0.
[propagated-inputs]: Add r-pillar.
 2019-11-25 14:05:38 +01:00
Ricardo Wurmus
eb6aad884f
gnu: r-parameters: Update to 0.3.0. 
* gnu/packages/cran.scm (r-parameters): Update to 0.3.0.
 2019-11-25 14:05:38 +01:00
Ricardo Wurmus
a6828e0bf5
gnu: r-abn: Update to 2.2. 
* gnu/packages/cran.scm (r-abn): Update to 2.2.
 2019-11-25 14:05:38 +01:00
Ricardo Wurmus
f94705d606
gnu: r-limsolve: Update to 1.5.6. 
* gnu/packages/cran.scm (r-limsolve): Update to 1.5.6.
 2019-11-25 14:05:38 +01:00
Ricardo Wurmus
3b2c3878f5
gnu: r-prodlim: Update to 2019.11.13. 
* gnu/packages/cran.scm (r-prodlim): Update to 2019.11.13.
 2019-11-25 14:05:38 +01:00
Ricardo Wurmus
3d391d2df4
gnu: r-webshot: Update to 0.5.2. 
* gnu/packages/cran.scm (r-webshot): Update to 0.5.2.
 2019-11-25 14:05:38 +01:00
Ricardo Wurmus
2cef54c060
gnu: r-insight: Update to 0.7.0. 
* gnu/packages/cran.scm (r-insight): Update to 0.7.0.
 2019-11-25 14:05:38 +01:00
Ricardo Wurmus
24edd279e4
gnu: Add r-effectsize. 
* gnu/packages/cran.scm (r-effectsize): New variable.
 2019-11-25 14:05:38 +01:00
Ricardo Wurmus
7b4b1136cc
gnu: r-rcppeigen: Update to 0.3.3.7.0. 
* gnu/packages/statistics.scm (r-rcppeigen): Update to 0.3.3.7.0.
 2019-11-25 14:05:38 +01:00
Ricardo Wurmus
55bb00b198
gnu: r-rlang: Update to 0.4.2. 
* gnu/packages/statistics.scm (r-rlang): Update to 0.4.2.
 2019-11-25 14:05:37 +01:00
Ricardo Wurmus
0dc62774e1
gnu: r-digest: Update to 0.6.23. 
* gnu/packages/statistics.scm (r-digest): Update to 0.6.23.
 2019-11-25 14:05:37 +01:00
Ricardo Wurmus
5b720c15d1
gnu: r-pheatmap: Move to (gnu packages cran). 
* gnu/packages/statistics.scm (r-pheatmap): Move from here...
* gnu/packages/cran.scm (r-pheatmap): ...to here.
 2019-11-25 14:05:37 +01:00
Ricardo Wurmus
54a8cb963d
gnu: r-scales: Update to 1.1.0. 
* gnu/packages/cran.scm (r-scales): Update to 1.1.0.
[propagated-inputs]: Remove r-rcpp; add r-farver and r-lifecycle.
 2019-11-25 14:05:37 +01:00
Ricardo Wurmus
46130b7bee
gnu: r-scales: Move to (gnu packages cran). 
* gnu/packages/statistics.scm (r-scales): Move variable from here...
* gnu/packages/cran.scm (r-scales): ...to here.
 2019-11-25 14:05:32 +01:00
Efraim Flashner
aca2bf51b7
gnu: sdsl-lite: Don't use bundled libraries. 
* gnu/packages/datastructures.scm (sdsl-lite)[source]: Remove bundled
libraries in a snippet. Add patch to link to external libraries.
[arguments]: Add phase to install static library.
[native-inputs]: Add libdivsufsort.
 2019-11-25 14:08:32 +02:00
Efraim Flashner
2b04bb3b4e
gnu: sdsl-lite: Remove unused inputs. 
Documentation also wants graphviz, which drastically increases
'guiz size sdsl-lite'.

* gnu/packages/datastructures.scm (sdsl-lite)[native-inputs]: Remove
doxygen.
 2019-11-25 14:08:32 +02:00
Efraim Flashner
3546771cc8
gnu: libdivsufsort: Move to datastructures.scm. 
* gnu/packages/bioinformatics.scm (libdivsufsort): Move to ...
* gnu/packages/datastructures.scm: ... here.
 2019-11-25 14:08:32 +02:00
Efraim Flashner
31872b3e75
gnu: Add boost-static. 
* gnu/packages/boost.scm (boost-static): New variable.
 2019-11-25 14:08:31 +02:00
Efraim Flashner
775373b872
gnu: coq-bignums: Don't use unstable tarball. 
* gnu/pacakges/coq.scm (coq-bignums)[source]: Download using git-fetch.
 2019-11-25 14:08:31 +02:00
Efraim Flashner
8b1fd3cafd
gnu: bioperl-minimal: Don't use unstable tarball. 
* gnu/packages/bioinformatics.scm (bioperl-minimal)[source]: Download
using git-fetch.
 2019-11-25 14:08:31 +02:00
Efraim Flashner
46b0136e09
gnu: innoextract: Update to 1.8. 
* gnu/packages/compression.scm (innoextract): Update to 1.8.
 2019-11-25 14:08:31 +02:00
Efraim Flashner
ff9838640c
gnu: innoextract: Don't use unstable tarball. 
* gnu/packages/compression.scm (innoextract)[source]: Download the
release tarball.
 2019-11-25 14:08:31 +02:00
Efraim Flashner
298180cdb2
gnu: unshield: Don't use unstable tarball. 
* gnu/packages/compression.scm (unshield)[source]: Download using
git-fetch.
 2019-11-25 14:08:30 +02:00
Efraim Flashner
898ac8e732
gnu: snappy: Don't use unstable tarball. 
* gnu/packages/compression.scm (snappy)[source]: Download using
git-fetch.
 2019-11-25 14:08:30 +02:00
Efraim Flashner
d40362f425
gnu: sfarklib: Don't use unstable tarball. 
* gnu/packages/compression.scm (sfarklib)[source]: Download using
git-fetch.
 2019-11-25 14:08:30 +02:00
Efraim Flashner
609ba8d116
gnu: cinnamon-desktop: Don't use unstable tarball. 
* gnu/packages/cinnamon.scm (cinnamon-desktop)[source]: Download using
git-fetch.
 2019-11-25 14:08:30 +02:00
Efraim Flashner
fea30e12f7
gnu: sparsehash: Don't use unstable tarball. 
* gnu/packages/datastructures.scm (sparsehash)[source]: Download using
git-fetch.
 2019-11-25 14:08:30 +02:00
Efraim Flashner
e56d02a0e0
gnu: imlib2: Sort inputs alphabetically. 
* gnu/packages/image.scm (imlib2)[inputs]: Sort alphabetically.
 2019-11-25 14:08:29 +02:00
Efraim Flashner
115ace6ba5
gnu: imlib2: Update to 1.6.0. 
* gnu/packages/image.scm (imlib2): Update to 1.6.0.
[inputs]: Add libwebp, libid3tag.
 2019-11-25 14:08:29 +02:00
Efraim Flashner
2f6500faa4
gnu: gnunet-gtk: Sort inputs alphabetically. 
* gnu/packages/gnunet.scm (gnunet-gtk)[inputs]: Sort alphabetically.
 2019-11-25 14:08:29 +02:00
Efraim Flashner
dbdd77074a
gnu: gnunet-gtk: Update to 0.11.7. 
* gnu/packages/gnunet.scm (gnunet-gtk): Update to 0.11.7.
[version]: Don't inherit version from gnutls.
[inputs]: Add gnutls/dane.
 2019-11-25 14:08:29 +02:00
Efraim Flashner
edce19938a
gnu: gnunet: Update to 0.11.8. 
* gnu/packages/gnunet.scm: Update to 0.11.8.
[inputs]: Add libidn2, miniupnpc, zbar. Remove glib, gmp,
gst-plugins-base, libidn, nss, openssl, perl, python-2.
[native-inputs]: Add python, xxd, which.
[arguments]: Remove configure-flags. Add phase to remove network
dependent tests. Re-arrange location of new 'check phase.
 2019-11-25 14:08:29 +02:00
Efraim Flashner
baac9ff97c
gnu: gnunet-gtk: Set upstream ftp-directory. 
* gnu/packages/gnunet.scm (gnunet-gtk)[properties]: New field. Set
ftp-directory.
 2019-11-25 14:08:26 +02:00
Tobias Geerinckx-Rice
8e77da0d11
gnu: bambam: Update to 1.0.0. 
* gnu/packages/games.scm (bambam): Update to 1.0.0.
[arguments]: Use default Python (3).
Delete obsolete ‘patch-data-dir-location’ phase.
 2019-11-24 13:32:58 +01:00
Tobias Geerinckx-Rice
9b0dae2222
gnu: perl-test-simple: Update to 1.302169. 
* gnu/packages/perl-check.scm (perl-test-simple): Update to 1.302169.
 2019-11-24 13:32:58 +01:00