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Author SHA1 Message Date
Christopher Baines
9c98d588c2
gnu: Add python-slimit. 
* gnu/packages/python-web.scm (python-slimit, python2-slimit): New variables.
 2018-11-20 19:48:02 +00:00
Christopher Baines
90b9c5adea
gnu: Add python-jsmin. 
* gnu/packages/python-web.scm (python-jsmin, python2-jsmin): New variables.
 2018-11-20 19:48:00 +00:00
Kei Kebreau
b3175c709d
gnu: cabextract: Update to 1.9. 
* gnu/packages/compression.scm (cabextract): Update to 1.9.
[arguments]: Add phase "unpack-libmspack".
[inputs]: Add libmspack-source.
 2018-11-20 13:55:10 -05:00
Kei Kebreau
ea80fd1ff5
gnu: libmspack: Update to 0.9.1. 
* gnu/packages/compression.scm (libmspack): Update to 0.9.1.
 2018-11-20 13:53:06 -05:00
Ludovic Courtès
3c4103c84f
gnu: java-jansi-native: Add "mips64el-linux" case. 
* gnu/packages/java.scm (java-jansi-native)[arguments]: Add
"mips64el-linux" in 'match' clause.
 2018-11-20 18:39:22 +01:00
Ludovic Courtès
e11462c2e4
Revert "gnu: ccl: Include x86-headers and remove missing "contrib" folder." 
This reverts commit d22ba64276, which
broke evaluations for armhf-linux.
 2018-11-20 18:36:05 +01:00
Ludovic Courtès
242b29baa1
gnu: autotalent: Simplify 'license'. 
* gnu/packages/audio.scm (autotalent)[license]: Remove unnecessary 'list'.
 2018-11-20 18:36:05 +01:00
Efraim Flashner
5e369f8ab9
gnu: Add pinentry-efl. 
* gnu/packages/gnupg.scm (pinentry-efl): New variable.
* gnu/packages/patches/pinentry-efl.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
 2018-11-20 12:38:57 +02:00
Marius Bakke
30f0feff19
gnu: libwebp: Update to 1.0.1. 
* gnu/packages/image.scm (libwebp): Update to 1.0.1.
 2018-11-20 00:57:49 +01:00
Marius Bakke
7882cc55bc
gnu: fluidsynth: Update to 2.0.2. 
* gnu/packages/audio.scm (fluidsynth): Update to 2.0.2.
 2018-11-20 00:57:49 +01:00
Marius Bakke
352401efb8
gnu: python-joblib: Update home page. 
* gnu/packages/python.scm (python-joblib)[home-page]: Update to current.
 2018-11-20 00:57:49 +01:00
Marius Bakke
ff43d95807
gnu: python-joblib: Update to 0.13.0. 
* gnu/packages/python.scm (python-joblib): Update to 0.13.0.
[source](snippet): Remove.
[arguments]: Remove 'disable-failing-tests' phase.  Add custom check phase.
[native-inputs]: Remove PYTHON-NOSE, PYTHON-SPHINX, PYTHON-DOCUTILS and
PYTHON-NUMPYDOC.  Add PYTHON-PYTEST.
 2018-11-20 00:57:49 +01:00
Marius Bakke
89d88b8530
gnu: python-natsort: Update to 5.4.1. 
* gnu/packages/python.scm (python-natsort): Update to 5.4.1.
[arguments]: Add #:modules.  Replace 'check' phase with custom pytest
invokation.
[native-inputs]: Remove PYTHON-PYTEST-CACHE, PYTHON-PYTEST-FLAKES and
PYTHON-PYTEST-PEP8.  Add PYTHON-PYTEST and PYTHON-PYTEST-MOCK.
(python2-natsort)[native-inputs]: Remove PYTHON2-ENUM34 and PYTHON2-MOCK.
 2018-11-20 00:57:48 +01:00
Marius Bakke
4a4f3e771b
gnu: z3: Update to 4.8.1. 
* gnu/packages/maths.scm (z3): Update to 4.8.1.
 2018-11-20 00:57:48 +01:00
Marius Bakke
fb525bfd83
gnu: z3: Fetch source using git. 
* gnu/packages/maths.scm (z3)[source]: Change to GIT-FETCH.
 2018-11-20 00:57:48 +01:00
Pkill -9
cc661cb348
gnu: xonotic: Symlink to xonotic data instead of copying into xonotic. 
* gnu/packages/games.scm (xonotic)[arguments]: Modify the phase
'install-data so it creates a symlink to xonotic's data instead of
copying it into the xonotic package.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2018-11-19 23:11:38 +01:00
Thorsten Wilms
c3276dbecb
gnu: Add autotalent. 
* gnu/packages/audio.scm (autotalent): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2018-11-19 23:11:38 +01:00
Ludovic Courtès
887437ee0e
gnu: git-when-merged: Fix license. 
Reported by Mark H Weaver <mhw@netris.org>.

* gnu/packages/version-control.scm (git-when-merged)[license]: Change to
GPL2+.
 2018-11-19 23:11:38 +01:00
Roel Janssen
4db71841ee
gnu: r-shinyfiles: Update to 0.7.2. 
* gnu/packages/web.scm (r-shinyfiles): Update to 0.7.2.
 2018-11-19 17:20:05 +01:00
Roel Janssen
0adf04a2d3
gnu: r-mclust: Update to 5.4.2. 
* gnu/packages/statistics.scm (r-mclust): Update to 5.4.2.
 2018-11-19 17:19:44 +01:00
Roel Janssen
185663e568
gnu: r-openssl: Update to 1.1. 
* gnu/packages/statistics.scm (r-openssl): Update to 1.1.
 2018-11-19 17:19:15 +01:00
Roel Janssen
749872a5ed
gnu: r-biocmanager: Update to 1.30.4. 
* gnu/packages/cran.scm (r-biocmanager): Update to 1.30.4.
 2018-11-19 17:18:41 +01:00
Roel Janssen
278e0f6506
gnu: r-ggeffects: Update to 0.7.0. 
* gnu/packages/cran.scm (r-ggeffects): Update to 0.7.0.
 2018-11-19 17:18:19 +01:00
Roel Janssen
fba7dbe76c
gnu: r-sjstats: Update to 0.17.2. 
* gnu/packages/cran.scm (r-sjstats): Update to 0.17.2.
 2018-11-19 17:17:54 +01:00
Roel Janssen
1659c5dd27
gnu: r-ggpubr: Update to 0.2. 
* gnu/packages/cran.scm (r-ggpubr): Update to 0.2.
 2018-11-19 17:17:25 +01:00
Roel Janssen
e396b37822
gnu: r-recipes: Update to 0.1.4. 
* gnu/packages/cran.scm (r-recipes): Update to 0.1.4.
 2018-11-19 17:17:03 +01:00
Roel Janssen
e21659c70b
gnu: r-dimred: Update to 0.2.2. 
* gnu/packages/cran.scm (r-dimred): Update to 0.2.2.
 2018-11-19 17:16:35 +01:00
Roel Janssen
c2e26dc156
gnu: r-ensembldb: Update to 2.6.2. 
* gnu/packages/bioinformatics.scm (r-ensembldb): Update to 2.6.2.
 2018-11-19 16:46:32 +01:00
Roel Janssen
e038819138
gnu: r-msnbase: Update to 2.8.1. 
* gnu/packages/bioinformatics.scm (r-msnbase): Update to 2.8.1.
 2018-11-19 16:46:00 +01:00
Roel Janssen
4535a7b0f5
gnu: r-genomeinfodb: Update to 1.18.1. 
* gnu/packages/bioinformatics.scm (r-genomeinfodb): Update to 1.18.1.
 2018-11-19 16:33:35 +01:00
Alex Vong
5497214d80
gnu: Add clojure-algo-monads. 
* gnu/packages/lisp.scm (clojure-algo-monads): New public variable.
 2018-11-19 12:10:06 +01:00
Alex Vong
2cab1d4a7d
gnu: Add clojure-tools-macro. 
* gnu/packages/lisp.scm (clojure-tools-macro): New public variable.
 2018-11-19 12:09:53 +01:00
Alex Vong
eea5530c9f
gnu: Add clojure-algo-generic. 
* gnu/packages/lisp.scm (clojure-algo-generic): New public variable.
 2018-11-19 12:09:39 +01:00
Alex Vong
c784ffa0c4
gnu: Add clojure-core-match. 
* gnu/packages/lisp.scm (clojure-core-match): New public variable.
 2018-11-19 12:09:15 +01:00
Alex Vong
d2a659e5bf
gnu: Add clojure-instaparse. 
* gnu/packages/lisp.scm (clojure-instaparse): New public variable.
 2018-11-19 12:08:26 +01:00
Alex Vong
53f316ab90
guix: Add clojure-utils. 
* guix/build/clojure-utils.scm: New file.
* gnu/packages/lisp.scm (clojure)[arguments]: Use it.
* Makefile.am (MODULES): Add it.
 2018-11-19 12:05:19 +01:00
Alex Vong
d0ad97115a
gnu: clojure: Use (guix build java-utils) to simplify build phases. 
* gnu/packages/lisp.scm (clojure)[arguments]: Use 'ant-build-javadoc',
'install-jars' and 'install-javadoc' in build phases.
 2018-11-19 12:02:26 +01:00
Alex Vong
8da9187a5a
gnu: clojure: Refactor to ensure there's a single list of libraries. 
This avoids having to update multiple lists.

* gnu/packages/lisp.scm (clojure)[native-inputs]: Use new local variable.
[arguments]: Adjust build phases accordingly.
 2018-11-19 12:02:09 +01:00
Alex Vong
df0a180421
gnu: clojure: Remove 'remove-archives' snippet. 
This is no longer needed since clojure now makes official source releases
in github.

* gnu/packages/lisp.scm (clojure)[source]: Remove it.
[native-inputs]: Remove it in 'submodule'.
[arguments]: Adjust 'unpack-submodule-sources' phase accordingly.
 2018-11-19 12:01:48 +01:00
Alex Vong
28e32b14e4
gnu: clojure: Move from java to lisp. 
* gnu/packages/java.scm (clojure): Move from here...
* gnu/packages/lisp.scm (clojure): ...to here.
 2018-11-19 12:01:25 +01:00
Jovany Leandro G.C
f4ee41c960
gnu: python-kivy: Update to 1.10.1 
* gnu/packages/python.scm (python-kivy): Update to 1.10.1.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2018-11-19 09:59:08 +01:00
Ludovic Courtès
5e9ce98af7
gnu: help2man: Add 1.47.8. 
* gnu/packages/man.scm (help2man/latest): New variable.
 2018-11-19 09:59:08 +01:00
Ludovic Courtès
1372754dc0
gnu: fuse-exfat: Update to 1.3.0. 
* gnu/packages/linux.scm (fuse-exfat): Update to 1.3.0.
 2018-11-19 09:59:08 +01:00
Ludovic Courtès
c39f3e1c43
gnu: diffoscope: Update to 105. 
* gnu/packages/package-management.scm (diffoscope): Update to 105.
 2018-11-19 09:59:07 +01:00
Leo Famulari
5c40a69f71
gnu: Add libfdk 'FDK AAC' library. 
* gnu/packages/audio.scm (libfdk): New variable.
 2018-11-18 18:19:34 -05:00
Julien Lepiller
564cf93f2a
gnu: ocaml: Update to 4.7.0. 
Update ocaml to the latest version and fixes dependent packages by
updating them or by adding new inputs, such as ocaml-num and ocamlbuild,
that were removed from the core ocaml package. Rename packages that
cannot be built with the new compiler with an ocaml4.02 prefix. Add
ocaml4.02 dependencies.

* gnu/packages/ocaml.scm (ocaml): Update to 4.7.0.
(ocaml-4.02, ocamlbuild, camlp4-4.02, ocaml-num, ocaml4.02-menhir)
(ocaml4.02-lablgtk, ocaml4.02-findlib, ocaml4.02-ounit, ocaml4.02-camlzip)
(ocaml4.02-ocamlmod, ocaml4.02-zarith, ocaml4.02-qcheck, ocaml4.02-qtest)
(ocaml4.02-stringext, ocaml4.02-bisect, dune, ocaml-migrate-parsetree)
(ocaml-ppx-tools-versioned, ocaml-ppx-tools-versioned)
(ocaml4.02-bitstring, ocaml4.02-result, ocaml4.02-topkg, ocaml4.02-rresult)
(ocaml4.02-sqlite3, ocaml4.02-csv, ocaml4.02-mtime, ocaml4.02-cmdliner)
(ocaml4.02-fmt, ocaml4.02-astring, ocaml4.02-alcotest, ocaml4.02-ppx-tools)
(ocaml4.02-react, ocaml4.02-ssl, ocaml4.02-lwt, ocaml-lwt-log)
(ocaml4.02-lwt-log, ocaml4.02-logs, ocaml4.02-fpath, ocaml4.02-bos)
(ocaml4.02-xmlm, ocaml4.02-ulex, ocaml4.02-uchar, ocaml4.02-uutf)
(ocaml4.02-jsonm, ocaml4.02-ocurl, ocaml4.02-base64, ocaml4.02-omake)
(ocaml4.02-batteries, ocaml4.02-pcre, ocaml4.02-oasis)
(ocaml4.02-js-build-tools, ocaml4.02-cppo, ocaml-seq, ocaml4.02-seq)
(ocaml4.02-re, ocaml4.02-ocplib-endian, ocaml4.02-easy-format)
(ocaml4.02-piqilib, ocaml4.02-uuidm, ocaml4.02-graph, ocaml4.02-piqi)
(ocaml4.02-camomile, ocaml4.02-zed, ocaml4.02-lambda-term): New packages.
(opam): Update to 2.0.0.
(camlp4): Update to 4.07+1.
(camlp5): Update to 7.06.
(hevea): Update to 2.32.
(coq)[inputs]: Add ocaml-num.
(emacs-tuareg): Update to 2.2.0.
(ocaml-menhir)[native-inputs]: Add ocamlbuild.
(ocaml-lablgtk): Update to 2.18.6.
(unison)[inputs]: Use ocaml-4.02.
(ocaml-findlib): Update to 1.8.0.
(ocaml-ounit)[native-inputs]: Add ocamlbuild.
(ocamlmod): Update to 0.0.9.
(ocaml-frontc)[arguments]: Use ocaml-4.02.
(ocaml-qcheck)[native-inputs]: Add ocamlbuild.
(ocaml-qtest)[native-inputs]: Remove ocaml-findlib and add ocamlbuild.
(ocaml-stringext)[native-inputs]: Add ocamlbuild.
(ocaml-bisect): Update to 1.3.1.
(ocaml4.01-bisect): Downgrade to 1.3.
(ocaml-bitstring): Update to 3.1.0.
(ocaml-topkg)[native-inputs]: Add ocamlbuild.
(ocaml-rresult)[native-inputs]: Add ocamlbuild.
(ocaml-sqlite3)[native-inputs]: Add ocamlbuild.
(ocaml-csv)[native-inputs]: Add ocamlbuild.
(ocaml-mtime)[native-inputs]: Add ocamlbuild.
(ocaml-cmdliner)[native-inputs]: Add ocamlbuild.
(ocaml-fmt)[native-inputs]: Add ocamlbuild.
(ocaml-astring)[native-inputs]: Add ocamlbuild.
(ocaml-alcotest)[native-inputs]: Add ocamlbuild.
(ocaml-ppx-tools)[native-inputs]: Add ocamlbuild.
(ocaml-react)[native-inputs]: Add ocamlbuild.
(ocaml-ssl)[arguments]: Return #t in phases.
(ocaml-lwt): Update to 4.1.0.
(ocaml-logs)[native-inputs]: Add ocamlbuild.
(ocaml-fpath)[native-inputs]: Add ocamlbuild.
(ocaml-bos)[native-inputs]: Add ocamlbuild.
(ocaml-xmlm): Update to 1.3.0.
(ocaml-ulex): Update to 1.2.0.
(ocaml-uchar)[native-inputs]: Add ocamlbuild.
(ocaml-uutf): Update to 1.0.1.
(ocaml-jsonm): Update to 1.0.1.
(ocaml-ocurl): Update to 0.8.2.
(ocaml-base64)[native-inputs]: Add ocamlbuild.
(ocamlify)[native-inputs]: Use ocaml-4.02.
(omake): Update to 0.10.3.
(ocaml-batteries): Update to 2.9.0.
(ocaml-pcre)[native-inputs]: Add ocamlbuild.
(ocaml-expect): Update 0.0.6.
(ocaml4.02-fileutils): Update to 0.5.3.
(ocaml-oasis): Update 0.4.11.
(ocaml-js-build-tools)[native-inputs]: Add ocamlbuild.
(ocaml-bin-prot): Rename to ocaml4.02-bin-prot.
(ocaml-fieldslib): Rename to ocaml4.02-fieldslib.
(ocaml-ppx-core): Rename to ocaml4.02-ppx-core.
(ocaml-ppx-optcomp): Rename to ocaml4.02-ppx-optcomp.
(ocaml-ppx-driver): Rename to ocaml4.02-ppx-driver.
(ocaml-cppo): Update to 1.6.5.
(ocaml-ppx-deriving): Rename to ocaml4.02-ppx-deriving.
(ocaml-ppx-type-conv): Rename to ocaml4.02-ppx-type-conv.
(ocaml-ppx-inline-test): Rename to ocaml4.02-ppx-inline-test.
(ocaml-ppx-bench): Rename to ocaml4.02-ppx-bench.
(ocaml-ppx-compare): Rename to ocaml4.02-ppx-compare.
(ocaml-sexplib): Rename to ocaml4.02-sexplib.
(ocaml-typerep): Rename to ocaml4.02-typerep.
(ocaml-variantslib): Rename to ocaml4.02-variantslib.
(ocaml-ppx-sexp-conv): Rename to ocaml4.02-ppx-sexp-conv.
(ocaml-ppx-variants-conv): Rename to ocaml4.02-ppx-variants-conv.
(ocaml-ppx-here): Rename to ocaml4.02-ppx-here.
(ocaml-ppx-assert): Rename to ocaml4.02-ppx-assert.
(ocaml-ppx-enumerate): Rename to ocaml4.02-ppx-enumerate.
(ocaml-ppx-let): Rename to ocaml4.02-ppx-let.
(ocaml-ppx-typerep-conv): Rename to ocaml4.02-ppx-typerep-conv.
(ocaml-ppx-sexp-value): Rename to ocaml4.02-ppx-sexp-value.
(ocaml-ppx-pipebang): Rename to ocaml4.02-ppx-pipebang.
(ocaml-ppx-bin-prot): Rename to ocaml4.02-ppx-bin-prot.
(ocaml-ppx-fail): Rename to ocaml4.02-ppx-fail.
(ocaml-ppx-custom-printf): Rename to ocaml4.02-ppx-custom-printf.
(ocaml-ppx-sexp-message): Rename to ocaml4.02-ppx-sexp-message.
(ocaml-ppx-fields-conv): Rename to ocaml4.02-ppx-fields-conv.
(ocaml-re): Update to 1.8.0.
(ocaml-ppx-expect): Rename to ocaml4.02-ppx-expect.
(ocaml-ppx-jane): Rename to ocaml4.02-ppx-jane.
(ocaml-core-kernel): Rename to ocaml4.02-core-kernel.
(ocaml-async-kernel): Rename to ocaml4.02-async-kernel.
(ocaml-async-rpc-kernel): Rename to ocaml4.02-async-rpc-kernel.
(ocaml-core): Rename to ocaml4.02-core.
(ocaml-async-unix): Rename to ocaml4.02-async-unix.
(ocaml-async-extra): Rename to ocaml4.02-async-extra.
(ocaml-async): Rename to ocaml4.02-async.
(ocaml-ocplib-endian)[native-inputs]: Update to 1.0.
(ocaml-cstruct): Rename to ocaml4.02-cstruct.
(ocaml-hex): Rename to ocaml4.02-hex.
(ocaml-ezjsonm): Rename to ocaml4.02-ezjsonm.
(ocaml-uri): Rename to ocaml4.02-uri.
(optcomp): Use ocaml-4.02.
(ocaml-piqilib): Update to 0.6.14.
(ocaml-uuidm)[native-inputs]: Add ocamlbuild.
(ocaml-graph): Update to 1.8.8.
(ocaml-piqi): Update to 0.7.6.
(bap): Update to 1.3.0.
(ocaml-camomile): Update to 1.0.1.
(ocaml-jbuilder): Use ocaml-4.02.
(ocaml-lambda-term): Update to 1.13.
(ocaml-utop): Update to 2.2.0.
(ocaml-integers)[native-inputs]: Add ocamlbuild.
(ocaml-ctypes): Update to 0.14.0.
(ocaml-ocb-stubblr)[native-inputs]: Add ocamlbuild.
(ocaml-tsdl)[native-inputs]: Add ocamlbuild.
* gnu/packages/machine-learning.scm (ocaml-mcl): Use ocaml-4.02.
* gnu/packages/maths.scm (cubicle): Update to 1.1.2.
* gnu/packages/patches/ocaml-bisect-fix-camlp4-in-another-directory.patch:
Update patch.
* guix/build-system/ocaml.scm: (default-ocaml4.02, default-ocaml4.02-findlib)
(package-with-ocaml4.02, strip-ocaml4.02-variant): New variables.
 2018-11-18 18:51:08 +01:00
Kei Kebreau
1472d19abf
gnu: maxima: Fix tests on i686 and x86_64. 
* gnu/packages/maths.scm (maxima)[arguments]: Replace check phase.
 2018-11-18 11:58:38 -05:00
Pierre Neidhardt
d22ba64276
gnu: ccl: Include x86-headers and remove missing "contrib" folder. 
* gnu/packages/lisp.scm (ccl): Include x86-headers and remove missing "contrib" folder.
 2018-11-18 10:39:47 +01:00
Marius Bakke
f8cba3ff4f
gnu: mesa: Stay on RTTI-less LLVM. 
* gnu/packages/llvm.scm (llvm-without-rtti): New public variable.
* gnu/packages/gl.scm (mesa)[inputs]: Use that instead of LLVM.
 2018-11-17 22:54:03 +01:00
Eric Bavier
0a41123f01
gnu: Add ClamAV. 
* gnu/packages/antivirus.scm: New file.
* gnu/packages/patches/clamav-system-tomsfastmath.patch,
gnu/packages/patches/clamav-config-llvm-libs.patch: New files.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add new module.
(dist_patch_DATA): Add patches.

Co-authored-by: Christopher Baines <mail@cbaines.net>
 2018-11-17 00:20:44 -06:00