Commit graph

87264 commits

Author SHA1 Message Date
Ricardo Wurmus
de8a55d138
gnu: r-variancepartition: Update to 1.24.0.
* gnu/packages/bioconductor.scm (r-variancepartition): Update to 1.24.0.
[propagated-inputs]: Remove r-colorramps; add r-matrix and r-rlang.
2021-11-07 22:34:53 +00:00
Ricardo Wurmus
beb530df2a
gnu: r-variantfiltering: Update to 1.30.0.
* gnu/packages/bioconductor.scm (r-variantfiltering): Update to 1.30.0.
2021-11-07 22:34:53 +00:00
Ricardo Wurmus
8dbca889e0
gnu: r-timeseriesexperiment: Update to 1.12.0.
* gnu/packages/bioconductor.scm (r-timeseriesexperiment): Update to 1.12.0.
2021-11-07 22:34:52 +00:00
Ricardo Wurmus
a326c65428
gnu: r-wavcluster: Update to 2.28.0.
* gnu/packages/bioconductor.scm (r-wavcluster): Update to 2.28.0.
2021-11-07 22:34:52 +00:00
Ricardo Wurmus
bbfeee3ee4
gnu: r-reqon: Update to 1.40.0.
* gnu/packages/bioconductor.scm (r-reqon): Update to 1.40.0.
2021-11-07 22:34:52 +00:00
Ricardo Wurmus
10a7837bb8
gnu: r-seqbias: Update to 1.42.0.
* gnu/packages/bioconductor.scm (r-seqbias): Update to 1.42.0.
2021-11-07 22:34:52 +00:00
Ricardo Wurmus
8305dd2411
gnu: r-bigmelon: Update to 1.20.0.
* gnu/packages/bioconductor.scm (r-bigmelon): Update to 1.20.0.
[propagated-inputs]: Add r-illuminaio.
2021-11-07 22:34:52 +00:00
Ricardo Wurmus
0837205009
gnu: r-gdsfmt: Update to 1.30.0.
* gnu/packages/bioconductor.scm (r-gdsfmt): Update to 1.30.0.
2021-11-07 22:34:52 +00:00
Ricardo Wurmus
f3e1fe2b2f
gnu: r-watermelon: Update to 2.0.0.
* gnu/packages/bioconductor.scm (r-watermelon): Update to 2.0.0.
[native-inputs]: Add r-knitr.
2021-11-07 22:34:52 +00:00
Ricardo Wurmus
316bf235c0
gnu: r-roc: Update to 1.70.0.
* gnu/packages/bioconductor.scm (r-roc): Update to 1.70.0.
[propagated-inputs]: Remove r-knitr.
[native-inputs]: Add r-knitr.
2021-11-07 22:34:52 +00:00
Ricardo Wurmus
26e3242dba
gnu: r-genie3: Update to 1.16.0.
* gnu/packages/bioconductor.scm (r-genie3): Update to 1.16.0.
2021-11-07 22:34:52 +00:00
Ricardo Wurmus
cace0f424b
gnu: r-circrnaprofiler: Update to 1.8.0.
* gnu/packages/bioconductor.scm (r-circrnaprofiler): Update to 1.8.0.
2021-11-07 22:34:52 +00:00
Ricardo Wurmus
6f9be50deb
gnu: r-cicero: Update to 1.12.0.
* gnu/packages/bioconductor.scm (r-cicero): Update to 1.12.0.
2021-11-07 22:34:52 +00:00
Ricardo Wurmus
75aed1303a
gnu: r-chicago: Update to 1.22.0.
* gnu/packages/bioconductor.scm (r-chicago): Update to 1.22.0.
2021-11-07 22:34:51 +00:00
Ricardo Wurmus
398007448c
gnu: r-rcistarget: Update to 1.14.0.
* gnu/packages/bioconductor.scm (r-rcistarget): Update to 1.14.0.
2021-11-07 22:34:51 +00:00
Ricardo Wurmus
20d81fa969
gnu: r-depecher: Update to 1.10.0.
* gnu/packages/bioconductor.scm (r-depecher): Update to 1.10.0.
2021-11-07 22:34:51 +00:00
Ricardo Wurmus
765ed6a2c9
gnu: r-mixomics: Update to 6.17.26.
* gnu/packages/bioconductor.scm (r-mixomics): Update to 6.17.26.
2021-11-07 22:34:51 +00:00
Ricardo Wurmus
789958567e
gnu: r-flowsom: Update to 2.2.0.
* gnu/packages/bioconductor.scm (r-flowsom): Update to 2.2.0.
2021-11-07 22:34:51 +00:00
Ricardo Wurmus
76a0df65d2
gnu: r-cytoml: Update to 2.6.0.
* gnu/packages/bioconductor.scm (r-cytoml): Update to 2.6.0.
2021-11-07 22:34:51 +00:00
Ricardo Wurmus
b6410270ba
gnu: r-opencyto: Update to 2.6.0.
* gnu/packages/bioconductor.scm (r-opencyto): Update to 2.6.0.
2021-11-07 22:34:51 +00:00
Ricardo Wurmus
101cad4791
gnu: r-flowstats: Update to 4.6.0.
* gnu/packages/bioconductor.scm (r-flowstats): Update to 4.6.0.
2021-11-07 22:34:51 +00:00
Ricardo Wurmus
42df07647a
gnu: r-flowworkspace: Update to 4.6.0.
* gnu/packages/bioconductor.scm (r-flowworkspace): Update to 4.6.0.
2021-11-07 22:34:51 +00:00
Ricardo Wurmus
a27ff891a6
gnu: r-rprotobuflib: Update to 2.6.0.
* gnu/packages/bioconductor.scm (r-rprotobuflib): Update to 2.6.0.
2021-11-07 22:34:51 +00:00
Ricardo Wurmus
007e62be63
gnu: r-flowclust: Update to 3.32.0.
* gnu/packages/bioconductor.scm (r-flowclust): Update to 3.32.0.
[inputs]: Remove gsl.
2021-11-07 22:34:51 +00:00
Ricardo Wurmus
3bffe05708
gnu: r-flowviz: Update to 1.58.0.
* gnu/packages/bioconductor.scm (r-flowviz): Update to 1.58.0.
2021-11-07 22:34:51 +00:00
Ricardo Wurmus
833c945998
gnu: r-ggcyto: Update to 1.22.0.
* gnu/packages/bioconductor.scm (r-ggcyto): Update to 1.22.0.
2021-11-07 22:34:51 +00:00
Ricardo Wurmus
224eccca7a
gnu: r-ncdfflow: Update to 2.40.0.
* gnu/packages/bioconductor.scm (r-ncdfflow): Update to 2.40.0.
2021-11-07 22:34:50 +00:00
Ricardo Wurmus
9e01b4118e
gnu: r-flowmeans: Update to 1.54.0.
* gnu/packages/bioconductor.scm (r-flowmeans): Update to 1.54.0.
2021-11-07 22:34:50 +00:00
Ricardo Wurmus
fe947b3c0e
gnu: r-flowcore: Update to 2.6.0.
* gnu/packages/bioconductor.scm (r-flowcore): Update to 2.6.0.
2021-11-07 22:34:50 +00:00
Ricardo Wurmus
6e07dec942
gnu: r-cytolib: Update to 2.6.0.
* gnu/packages/bioconductor.scm (r-cytolib): Update to 2.6.0.
2021-11-07 22:34:50 +00:00
Ricardo Wurmus
9e3ee89786
gnu: r-consensusclusterplus: Update to 1.58.0.
* gnu/packages/bioconductor.scm (r-consensusclusterplus): Update to 1.58.0.
2021-11-07 22:34:50 +00:00
Ricardo Wurmus
311adddab3
gnu: r-flowutils: Update to 1.58.0.
* gnu/packages/bioconductor.scm (r-flowutils): Update to 1.58.0.
2021-11-07 22:34:50 +00:00
Ricardo Wurmus
c58ed007a2
gnu: r-rsubread: Update to 2.8.0.
* gnu/packages/bioconductor.scm (r-rsubread): Update to 2.8.0.
2021-11-07 22:34:50 +00:00
Ricardo Wurmus
4940f6d680
gnu: r-annotatr: Update to 1.20.0.
* gnu/packages/bioconductor.scm (r-annotatr): Update to 1.20.0.
2021-11-07 22:34:50 +00:00
Ricardo Wurmus
b960dc7be5
gnu: r-biosigner: Update to 1.22.0.
* gnu/packages/bioconductor.scm (r-biosigner): Update to 1.22.0.
2021-11-07 22:34:50 +00:00
Ricardo Wurmus
1e2401b767
gnu: r-ropls: Update to 1.26.0.
* gnu/packages/bioconductor.scm (r-ropls): Update to 1.26.0.
2021-11-07 22:34:50 +00:00
Ricardo Wurmus
970e3e291e
gnu: r-multidataset: Update to 1.22.0.
* gnu/packages/bioconductor.scm (r-multidataset): Update to 1.22.0.
2021-11-07 22:34:50 +00:00
Ricardo Wurmus
505b5d2685
gnu: r-birewire: Update to 3.26.0.
* gnu/packages/bioconductor.scm (r-birewire): Update to 3.26.0.
2021-11-07 22:34:50 +00:00
Ricardo Wurmus
c3ce59c624
gnu: r-rqc: Update to 1.28.0.
* gnu/packages/bioconductor.scm (r-rqc): Update to 1.28.0.
2021-11-07 22:34:50 +00:00
Ricardo Wurmus
e2aa710ca4
gnu: r-quasr: Update to 1.34.0.
* gnu/packages/bioconductor.scm (r-quasr): Update to 1.34.0.
[propagated-inputs]: Remove r-biocmanager.
2021-11-07 22:34:49 +00:00
Ricardo Wurmus
80980d827a
gnu: r-rhisat2: Update to 1.10.0.
* gnu/packages/bioconductor.scm (r-rhisat2): Update to 1.10.0.
2021-11-07 22:34:49 +00:00
Ricardo Wurmus
0187dd1a1d
gnu: r-sgseq: Update to 1.28.0.
* gnu/packages/bioconductor.scm (r-sgseq): Update to 1.28.0.
2021-11-07 22:34:49 +00:00
Ricardo Wurmus
1b455ccb4b
gnu: r-rbowtie: Update to 1.34.0.
* gnu/packages/bioconductor.scm (r-rbowtie): Update to 1.34.0.
[inputs]: Remove zlib.
2021-11-07 22:34:49 +00:00
Ricardo Wurmus
0e507e0059
gnu: r-iclusterplus: Update to 1.30.0.
* gnu/packages/bioconductor.scm (r-iclusterplus): Update to 1.30.0.
2021-11-07 22:34:49 +00:00
Ricardo Wurmus
f592a0a4ee
gnu: r-biocfilecache: Update to 2.2.0.
* gnu/packages/bioconductor.scm (r-biocfilecache): Update to 2.2.0.
2021-11-07 22:34:49 +00:00
Ricardo Wurmus
2a9f215cd1
gnu: r-arrmnormalization: Update to 1.34.0.
* gnu/packages/bioconductor.scm (r-arrmnormalization): Update to 1.34.0.
2021-11-07 22:34:49 +00:00
Ricardo Wurmus
5d77708905
gnu: r-progeny: Update to 1.16.0.
* gnu/packages/bioconductor.scm (r-progeny): Update to 1.16.0.
2021-11-07 22:34:49 +00:00
Ricardo Wurmus
ba9573b14e
gnu: r-rbowtie2: Update to 2.0.0.
* gnu/packages/bioconductor.scm (r-rbowtie2): Update to 2.0.0.
[inputs]: Add samtools.
[propagated-inputs]: Add r-magrittr and r-rsamtools.
2021-11-07 22:34:49 +00:00
Ricardo Wurmus
efbe72addb
gnu: r-zfpkm: Update to 1.16.0.
* gnu/packages/bioconductor.scm (r-zfpkm): Update to 1.16.0.
2021-11-07 22:34:49 +00:00
Ricardo Wurmus
eb5f243f1b
gnu: r-zinbwave: Update to 1.16.0.
* gnu/packages/bioconductor.scm (r-zinbwave): Update to 1.16.0.
2021-11-07 22:34:49 +00:00