ryan77627/guix
1
0
Fork 0
mirror of https://git.in.rschanz.org/ryan77627/guix.git synced 2024-11-08 16:06:16 -05:00
Code Issues Projects Releases Packages Wiki Activity Actions
39834 commits 1 branch 0 tags 448 MiB
Commit graph

33975 commits

Author SHA1 Message Date
Tobias Geerinckx-Rice
a28cd47702
gnu: lunzip: Don't use NAME in source URI. 
* gnu/packages/compression.scm (lunzip)[source]: Hard-code NAME.
 2019-02-12 17:38:23 +01:00
Tobias Geerinckx-Rice
ff0e1eed32
gnu: plzip: Update to 1.8. 
* gnu/packages/compression.scm (plzip): Update to 1.8.
 2019-02-12 17:38:22 +01:00
Tobias Geerinckx-Rice
894669a787
gnu: plzip: Don't use NAME in source URI. 
* gnu/packages/compression.scm (plzip)[source]: Hard-code NAME.
 2019-02-12 17:38:22 +01:00
Tobias Geerinckx-Rice
b099b4a75a
gnu: lziprecover: Update to 1.21. 
* gnu/packages/compression.scm (lziprecover): Update to 1.21.
 2019-02-12 17:38:22 +01:00
Tobias Geerinckx-Rice
f6145bb652
gnu: lziprecover: Don't use NAME in source URI. 
* gnu/packages/compression.scm (lziprecover)[source]: Hard-code NAME.
 2019-02-12 17:38:22 +01:00
Tobias Geerinckx-Rice
da93d42413
gnu: perl-dbi: Update to 1.642. 
* gnu/packages/databases.scm (perl-dbi): Update to 1.642.
 2019-02-12 17:38:21 +01:00
Tobias Geerinckx-Rice
245e7a68e7
gnu: kyotocabinet: Update to 1.2.77. 
* gnu/packages/databases.scm (kyotocabinet): Update to 1.2.77.
 2019-02-12 17:38:21 +01:00
Tobias Geerinckx-Rice
e9bdef5fb4
gnu: os-prober: Update to 1.77. 
* gnu/packages/bootloaders.scm (os-prober): Update to 1.77.
 2019-02-12 17:38:21 +01:00
Tobias Geerinckx-Rice
51a8fc8b42
gnu: feh: Update to 3.1.2. 
* gnu/packages/image-viewers.scm (feh): Update to 3.1.2.
 2019-02-12 17:38:21 +01:00
Maxim Cournoyer
155194d97d
gnu: python-pybedtools: Update to 0.8.0 and fix build. 
From 40db2b4eae5ca61a3134cdaf7b156ed1ae9f7415 Mon Sep 17 00:00:00 2001
From: Maxim Cournoyer <maxim.cournoyer@gmail.com>
Date: Sun, 10 Feb 2019 23:39:25 -0500
Subject: [PATCH] gnu: python-pybedtools: Update to 0.8.0 and fix build.

* gnu/packages/bioinformatics.scm (python-pybedtools): Update to 0.8.0.
[phases]{disable-broken-tests}: Do not disable "test_issue_157" and
"test_to_dataframe" tests.  Disable the "test_getting_example_beds".
{remove-cython-generated-files}: Add phase.
{generate-cython-extensions}: Add phase.
{check}: Move from python2-pybedtools to here.  Add a scripts
subdirectory of the build directory to the PATH, so that the tests can call
them.  Invoke pytest rather than nosetests.
[modules]: Move from python2-pybedtools to here.
[propagated-inputs]: Depend on the current BEDTOOLS rather than version 1.26.
[native-inputs]: Replace python-nose by python-pytest and add python-psutil.
 2019-02-12 17:16:05 +01:00
Efraim Flashner
b856a78c94
gnu: efilinux: Set ARCH variable on some architectures. 
Even with this patch efilinux does not build for arm*.

* gnu/packages/efi.scm (efilinux)[arguments]: On armhf-linux and
aarch64-linux set the ARCH variable apropriately.
 2019-02-12 18:08:19 +02:00
Ricardo Wurmus
385d7546e1
gnu: Add cnvkit. 
* gnu/packages/bioinformatics.scm (cnvkit): New variable.
 2019-02-12 15:41:02 +01:00
Ricardo Wurmus
c18dccffa2
gnu: Add r-dnacopy. 
* gnu/packages/bioconductor.scm (r-dnacopy): New variable.
 2019-02-12 15:41:02 +01:00
Ricardo Wurmus
ab61ce3730
gnu: python-reportlab: Update to 3.5.13. 
* gnu/packages/pdf.scm (python-reportlab): Update to 3.5.13.
[inputs]: Add freetype.
 2019-02-12 15:40:58 +01:00
Efraim Flashner
c86b5f1b9b
gnu: glibc@2.27: fix CVE-2018-11236, CVE-2018-11237. 
* gnu/packages/base.scm (glibc@2.27)[sources]: Add patches.
[properties]: New field, mark CVE-2017-18269 fixed.
* gnu/packages/patches/glibc-CVE-2018-11236.patch,
gnu/packages/patches/glibc-CVE-2018-11237.patch: New files.
* gnu/local.mk (dist_patch_DATA): Register them.
 2019-02-12 09:08:13 +02:00
Tobias Geerinckx-Rice
d4c95a237c
gnu: parallel: Update to 20190122. 
* gnu/packages/parallel.scm (parallel): Update to 20190122.
 2019-02-12 02:33:55 +01:00
Tobias Geerinckx-Rice
a661af5c9a
gnu: maven-resolver-api: Don't use unstable tarball. 
* gnu/packages/maven.scm (maven-resolver-api)[source]: Use GIT-FETCH and
GIT-FILE-NAME.
 2019-02-12 02:33:55 +01:00
Tobias Geerinckx-Rice
57e3f06bbd
gnu: multipath-tools: Update to 0.7.9. 
* gnu/packages/linux.scm (multipath-tools): Update to 0.7.9.
 2019-02-12 02:33:55 +01:00
Tobias Geerinckx-Rice
34920d2adf
gnu: websockify: Don't use unstable tarball. 
* gnu/packages/web.scm (websockify)[source]: Use GIT-FETCH and
GIT-FILE-NAME.
 2019-02-12 02:33:55 +01:00
Tobias Geerinckx-Rice
2772debc74
gnu: libyajl: Don't use unstable tarball. 
* gnu/packages/web.scm (libyajl)[source]: Use GIT-FETCH and
GIT-FILE-NAME.
 2019-02-12 02:33:54 +01:00
Tobias Geerinckx-Rice
3e3414efd4
gnu: rapidjson: Don't use unstable tarball. 
* gnu/packages/web.scm (rapidjson)[source]: Use GIT-FETCH and
GIT-FILE-NAME.
 2019-02-12 02:33:54 +01:00
Tobias Geerinckx-Rice
082504addf
gnu: qjson: Don't use unstable tarball. 
* gnu/packages/web.scm (qjson)[source]: Use GIT-FETCH and
GIT-FILE-NAME.
 2019-02-12 02:33:54 +01:00
Tobias Geerinckx-Rice
20ab34c16f
gnu: fcgiwrap: Don't use unstable tarball. 
* gnu/packages/web.scm (fcgiwrap)[source]: Use GIT-FETCH and
GIT-FILE-NAME.
 2019-02-12 02:33:54 +01:00
Tobias Geerinckx-Rice
bff44abb14
gnu: mod-wsgi: Don't use unstable tarball. 
* gnu/packages/web.scm (mod-wsgi)[source]: Use GIT-FETCH and
GIT-FILE-NAME.
 2019-02-12 02:33:53 +01:00
Leo Famulari
95c910f499
gnu: Guix: Update snapshot to 0.16.0-10.2637cfd. 
Fixes <https://bugs.gnu.org/34444>.

*  gnu/packages/package-management.scm (guix): Update to 0.16.0-10.2637cfd.
 2019-02-11 18:13:29 -05:00
Ludovic Courtès
910d0121a8
pack, vm: Fix incorrect use of 'package-transitive-propagated-inputs'. 
In practice the error was not triggered because
'package-transitive-propagated-inputs' currently returns the empty list
for these two packages.

* guix/scripts/pack.scm (gcrypt-sqlite3&co): Remove labels from the
result.
* gnu/system/vm.scm (gcrypt-sqlite3&co): Likewise.
 2019-02-11 23:23:28 +01:00
Ricardo Wurmus
8d11b6ddb8
gnu: guile-picture-language: Update to 0-2.1ea8b78. 
* gnu/packages/guile-xyz.scm (guile-picture-language): Update to 0-2.1ea8b78.
 2019-02-11 23:03:35 +01:00
Vagrant Cascadian
75d12c40f7
gnu: disorderfs: Update to 0.5.6. 
* gnu/packages/file-systems (disorderfs): Update to 0.5.6.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2019-02-11 16:54:37 -05:00
Vagrant Cascadian
295de8cc1a
gnu: diffoscope: Update to 111. 
* gnu/packages/package-management (diffoscope): Update to 111.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2019-02-11 16:54:37 -05:00
Andreas Enge
fa8ffaa0df
gnu: python-cython: Update to 0.29.5. 
* gnu/packages/python-xyz.scm (python-cython): Update to 0.29.5.
 2019-02-11 21:20:41 +01:00
Marius Bakke
c8b69863eb
gnu: pixman: Update source URI. 
* gnu/packages/xdisorg.scm (pixman)[source](uri): Use HTTPS.
 2019-02-11 19:20:55 +01:00
Marius Bakke
93617188d9
gnu: python-django: Update to 1.11.20 [fixes CVE-2019-6975]. 
* gnu/packages/django.scm (python-django): Update to 1.11.20.
 2019-02-11 19:20:55 +01:00
Marius Bakke
c508c06573
gnu: ffmpeg: Update to 4.1.1. 
* gnu/packages/video.scm (ffmpeg): Update to 4.1.1.
 2019-02-11 19:20:55 +01:00
Marius Bakke
b861fc157c
gnu: miniupnpc: Update to 2.1.20190210. 
* gnu/packages/upnp.scm (miniupnpc): Update to 2.1.20190210.
 2019-02-11 19:20:55 +01:00
Marius Bakke
a2467954b8
gnu: lv2: Update to 1.16.0. 
* gnu/packages/audio.scm (lv2): Update to 1.16.0.
[arguments]: Remove #:python.
(lv2-devel): Remove variable.
* gnu/packages/music.scm (ingen)[inputs]: Change LV2-DEVEL to LV2.
 2019-02-11 19:20:55 +01:00
Danny Milosavljevic
86b2ab8f5b
gnu: vlc: Use libvpx-1.7. 
Fixes <https://bugs.gnu.org/34439>.

* gnu/packages/video.scm (vlc)[inputs]: Remove libvpx.  Add libvpx-1.7.
 2019-02-11 18:48:42 +01:00
Danny Milosavljevic
1c84e68bde
services: docker: Make shepherd service also require "dbus-system", 
"elogind" and "udev".

Fixes <https://bugs.gnu.org/34333>.

* gnu/services/docker.scm (docker-shepherd-service): Require "dbus-system",
"elogind" and "udev".
 2019-02-11 18:29:01 +01:00
Kei Kebreau
df56098220
gnu: gama: Update to 2.03. 
* gnu/packages/gps.scm (gama): Update to 2.03.
 2019-02-11 05:49:19 -05:00
Danny Milosavljevic
268e12a894
services: docker: Make shepherd service require "networking". 
Fixes <https://bugs.gnu.org/34333>.

* gnu/services/docker.scm (docker-shepherd-service): Require "networking".
 2019-02-11 11:45:12 +01:00
Vagrant Cascadian
4a14ee9127
gnu: gloox: Update to 1.0.22. 
* gnu/packages/messaging.scm (gloox): Update to 1.0.22.
 2019-02-11 11:12:27 +01:00
Vagrant Cascadian
37da5813e9
gnu: python-ecpy: Update to 0.10.0. 
* gnu/packages/python-crypto.scm (python-ecpy): Update to 0.10.0.
 2019-02-11 11:08:40 +01:00
Vagrant Cascadian
a62887d30d
gnu: python-pycryptodome: Update to 3.7.3. 
* gnu/packages/python-crypto (python-cryptodome): Update to 3.7.3.
 2019-02-11 11:04:44 +01:00
Vagrant Cascadian
6e2bad000f
gnu: u-boot-novena: Allow booting from raw device offset. 
* gnu/packages/bootloaders.scm (u-boot-novena): Disable loading u-boot.img
from a partition.
 2019-02-11 10:59:23 +01:00
Vagrant Cascadian
8d22f7e31f
gnu: Add python-pymsgbox. 
* gnu/packages/python-xyz.scm (python-pymsgbox): New variable.
 2019-02-11 10:51:11 +01:00
Vagrant Cascadian
a336334196
gnu: Add python-daemon. 
* gnu/packages/python-xyz.scm (python-daemon): New variable.
 2019-02-11 10:37:54 +01:00
Leo Famulari
f5c46fa0d0
gnu: dmenu: Update to 4.9. 
* gnu/packages/suckless.scm (dmenu): Update to 4.9.
 2019-02-11 02:41:26 -05:00
Leo Famulari
d561243917
gnu: Dropbear: Add a comment about bundled libraries. 
* gnu/packages/ssh.scm (dropbear): Comment.
 2019-02-10 23:03:57 -05:00
Leo Famulari
8f9c5aa3ba
gnu: curl: Update to 7.64.0 [fixes CVE-2018-16890 and CVE-2019-{3822,3823}]. 
* gnu/packages/curl.scm (curl)[replacement]: New field.
(curl-7.64.0): New variable.
 2019-02-10 22:03:50 -05:00
Leo Famulari
c03b355fa7
gnu: Dovecot: Update to 2.3.4.1 [fixes CVE-2019-3814]. 
* gnu/packages/mail.scm (dovecot): Update to 2.3.4.1.
 2019-02-10 22:03:50 -05:00
Leo Famulari
f6e64282b4
gnu: Syncthing: Update to 1.0.1. 
* gnu/packages/syncthing.scm (syncthing): Update to 1.0.1.
 2019-02-10 21:38:07 -05:00