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David Elsing
2aeb37def2
gnu: python-pytorch-for-r-torch: Adjust to new python-pytorch. 
* gnu/packages/machine-learning.scm (%python-pytorch-for-r-torch-src): Add
patches.
(python-pytorch-for-r-torch)[version]: Use
%python-pytorch-for-r-torch-version.
[source]: Use %python-pytorch-for-r-torch-src.
[native-inputs]: Use 'modify-inputs'.
[inputs]: Don't replace xnnpack. Replace qnnpack-pytorch with
qnnpack-pytorch-for-r-torch and oneapi-dnnl with oneapi-dnnl-for-r-torch.
[propagated-inputs]: Don't replace onnx and onnx-optimizer.
* gnu/packages/patches/python-pytorch-for-r-torch-fix-codegen: New file.
* gnu/packages/patches/python-pytorch-for-r-torch-system-libraries.patch: New file.
* gnu/packages/patches/python-pytorch2-system-libraries.patch: Remove file.
* gnu/local.mk (dist_patch_DATA): Register them.
 2024-06-18 11:45:51 +02:00
David Elsing
085551a40f
gnu: Add qnnpack-pytorch-for-r-torch. 
* gnu/packages/machine-learning.scm (%python-pytorch-for-r-torch-version): New
variable.
(%python-pytorch-for-r-torch-src): New variable.
(qnnpack-pytorch-for-r-torch): New variable.
 2024-06-18 11:45:46 +02:00
David Elsing
e587d8fb69
gnu: Add oneapi-dnnl-for-r-torch. 
* gnu/packages/machine-learning.scm (oneapi-dnnl-for-r-torch): New variable.
 2024-06-18 11:45:39 +02:00
David Elsing
b38045190a
gnu: Add ideep-pytorch-for-r-torch. 
* gnu/packages/machine-learning.scm (ideep-pytorch-for-r-torch): New variable.
 2024-06-18 11:45:35 +02:00
David Elsing
4f50f86e41
gnu: python-torchvision: Update to 0.17.1. 
* gnu/packages/machine-learning.scm (python-torchvision): Update to 0.17.1.
[source]: Add snippet to remove "android" and "ios" directories.
 2024-06-18 11:45:15 +02:00
David Elsing
d218d024ed
gnu: Add python-pytorch-avx. 
* gnu/packages/machine-learning.scm (python-pytorch-avx): New variable.
 2024-06-18 11:45:07 +02:00
David Elsing
7b62d614e7
gnu: python-pytorch: Update to 2.2.1 and unbundle dependencies. 
Autogenerated files are also regenerated. The tests can be run, but are
disabled, as they require a long time.

* gnu/packages/machine-learning.scm (python-pytorch): Update to 2.2.1.
[version]: Use %python-pytorch-version.
[source]: Use %python-pytorch-src.
[arguments]: Remove 'make-things-writable phase.  Add 'cmake-patches,
'disable-avx-dependencies, 'set-max-jobs, 'codegen1, 'codegen2, 'build2,
'install2 phases. Adjust 'use-system-libraries and 'check phases.
[native-inputs]: Add doxygen, ideep-pytorch, pocketfft-cpp, python-expecttest,
python-pytest-flakefinder, python-pytest-rerunfailures-13,
python-pytest-shard, python-pytest-xdist, python-hypothesis,
python-types-dataclasses, python-typing-extensions-4.10 and valgrind.
[inputs]: Add asmjit, clog, flatbuffers-next, foxi, fxdiv, libuv,
miniz-for-pytorch, qnnpack, qnnpack-pytorch and oneapi-dnnl. Use nnpack,
oneapi-dnnl, qnnpack, qnnpack-pytorch and xnnpack only for supported systems.
[propagated-inputs]: Add python-filelock, python-fsspec, python-jinja2,
python-networkx, python-opt-einsum, python-optree, python-packaging,
python-psutil and python-sympy. Remove python-cffi and python-six. Use cpuinfo
only for supported systems.
(%python-pytorch-src)[source]: Add patches.
(python-pytorch2): Remove variable.
* gnu/packages/patches/python-pytorch-runpath.patch: Adjust patch.
* gnu/packages/patches/python-pytorch-system-libraries.patch: Adjust patch.
* gnu/packages/patches/python-pytorch-1.9.0-system-libraries.patch: Remove file.
* gnu/packages/patches/python-pytorch-fix-codegen.patch: New file.
* gnu/packages/patches/python-pytorch-without-kineto: New file.
* gnu/local.mk (dist_patch_DATA): Register them.
 2024-06-18 11:44:56 +02:00
David Elsing
b77c772a3e
gnu: Add qnnpack-pytorch. 
This is an internal fork of QNNPACK in the PyTorch source tree.

* gnu/packages/machine-learning.scm (%python-pytorch-version): New variable.
(%python-pytorch-src): New variable.
(qnnpack-pytorch): New variable.
 2024-06-18 11:44:48 +02:00
David Elsing
0c313244e0
gnu: Remove xnnpack-for-torch2. 
* gnu/packages/machine-learning.scm (xnnpack-for-torch2): Delete variable.
(python-pytorch-for-r-torch)[inputs]: Remove field.
* gnu/packages/patches/xnnpack-for-torch2-system-libraries.patch: Remove file.
* gnu/local.mk (dist_patch_DATA): Remove it.
 2024-06-18 11:44:40 +02:00
David Elsing
048e5a0692
gnu: xnnpack: Update to commit 51a9875. 
The tests which fail to build if building the shared library are removed by a
patch. Autogenerated files are removed by a snippet and generated in a
separate build phase.

* gnu/packages/machine-learning.scm (xnnpack): Update to commit 51a9875.
[source]: Add patch for tests. Add snippet to remove autogenerated files.
[arguments]: New modules and phase arguments.
[inputs]: Add clog and cpuinfo.
[native-inputs]: New field.
* gnu/packages/patches/xnnpack-remove-broken-tests.patch: Add file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/patches/xnnpack-system-libraries.patch: Update patch.
 2024-06-18 11:44:31 +02:00
David Elsing
b032109b5c
gnu: Add ideep-pytorch. 
* gnu/packages/machine-learning.scm (ideep-pytorch): New variable.
 2024-06-18 11:44:25 +02:00
David Elsing
3ef0b4e402
gnu: Add foxi. 
* gnu/packages/machine-learning.scm (foxi): New variable.
* gnu/packages/patches/foxi-fix-build.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
 2024-06-18 11:44:17 +02:00
David Elsing
35f4f33138
gnu: Add qnnpack. 
* gnu/packages/machine-learning.scm (qnnpack): New variable.
 2024-06-18 11:44:09 +02:00
David Elsing
ca63ef4f5b
gnu: Add fbgemm. 
* gnu/packages/machine-learning.scm (fbgemm): New variable.
* gnu/packages/patches/fbgemm-use-system-libraries.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
 2024-06-18 11:43:46 +02:00
David Elsing
c45b370385
gnu: Add tensorpipe. 
* gnu/packages/machine-learning.scm (tensorpipe): New variable.
 2024-06-18 11:42:32 +02:00
David Elsing
a039f0fc59
gnu: oneapi-dnnl: Update to 3.3.5. 
* gnu/packages/machine-learning.scm (oneapi-dnnl): Update to 3.3.5.
[supported-systems]: New field.
 2024-06-18 11:42:28 +02:00
David Elsing
e8c3fb3f7e
gnu: nnpack: Update to commit 70a77f4. 
* gnu/packages/machine-learning.scm (nnpack): Update to commit 70a77f4.
[supported-systems]: New field.
 2024-06-18 11:42:19 +02:00
David Elsing
bec16cc910
gnu: clog: Add "-DUSE_SYSTEM_LIBS=ON" configure flag. 
* gnu/packages/parallel.scm (clog)[arguments]: Add "-DUSE_SYSTEM_LIBS=ON"
to #:configure-flags.
* gnu/packages/patches/clog-fix-shared-build.patch: Adjust patch.
 2024-06-18 11:42:07 +02:00
David Elsing
ab6e8ecbb5
gnu: cpuinfo: Update to commit aa4b216. 
* gnu/packages/parallel.scm (cpuinfo): Update to commit aa4b216.
[arguments]: Set the "-DUSE_SYSTEM_LIBS=ON" configure flag instead of using a
patch.
[supported-systems]: New field.
* gnu/packages/patches/cpuinfo-system-libraries.patch: Remove file.
* gnu/local.mk (dist_patch_DATA): Remove it.
 2024-06-18 11:41:25 +02:00
David Elsing
b95c7203ea
gnu: pthreadpool: Update to commit 178e3e0. 
* gnu/packages/parallel.scm (pthreadpool): Update to commit 178e3e0.
 2024-06-18 11:39:08 +02:00
David Elsing
2469c605e1
gnu: python-flatbuffers-next: Update to 23.5.26. 
* gnu/packages/serialization.scm (python-flatbuffers-next): Update to 23.5.26.
 2024-06-18 11:38:20 +02:00
David Elsing
207174b69e
gnu: Remove flatbuffers-next-shared. 
* gnu/packages/serialization.scm (flatbuffers-next-shared): Delete variable.
* gnu/packages/machine-learning.scm (tensorflow-lite)[arguments]: Use
flatbuffers-next instead of flatbuffers-next-shared.
 2024-06-18 11:38:14 +02:00
David Elsing
c880c50019
gnu: Add libnop. 
* gnu/packages/serialization.scm (libnop): New variable.
 2024-06-18 11:37:25 +02:00
David Elsing
67b412f2b0
gnu: Add miniz-for-pytorch. 
* gnu/packages/compression.scm (miniz-for-pytorch): New variable.
* gnu/packages/patches/miniz-for-pytorch.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
 2024-06-18 11:35:51 +02:00
David Elsing
9dc696884e
gnu: Add miniz. 
* gnu/packages/compression.scm (miniz): New variable.
 2024-06-18 11:35:14 +02:00
David Elsing
796c3bdb55
gnu: Add python-pytest-rerunfailures-13. 
* gnu/packages/python-check.scm (python-pytest-rerunfailures-13): New variable.
 2024-06-18 11:34:31 +02:00
David Elsing
63233f1f0e
gnu: Add python-expecttest. 
* gnu/packages/python-check.scm (python-expecttest): New variable.
 2024-06-18 11:34:25 +02:00
David Elsing
22225dee9b
gnu: Add python-pytest-shard. 
* gnu/packages/python-check.scm (python-pytest-shard): New variable.
 2024-06-18 11:33:58 +02:00
David Elsing
ef7d9801e3
gnu: Add python-pytest-flakefinder. 
* gnu/packages/python-check.scm (python-pytest-flakefinder): New variable.
 2024-06-18 11:33:20 +02:00
David Elsing
7e3a2272e1
gnu: Add python-optree. 
* gnu/packages/python-xyz.scm (python-optree): New variable.
* gnu/packages/patches/python-optree-fix-32-bit.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.

Change-Id: I37e38ef9da5e7459c8faf2c3494e2e0c0aedbfff
 2024-06-18 11:32:55 +02:00
David Elsing
b452dd635f
gnu: Add python-typing-extensions-4.10. 
* gnu/packages/python-build.scm (python-typing-extensions-4.10): New variable.
 2024-06-18 11:26:56 +02:00
David Elsing
e6f873c936
gnu: asmjit: Update to commit 3ca5c18. 
* gnu/packages/cpp.scm (asmjit): Update to commit 3ca5c18.
 2024-06-18 11:26:54 +02:00
Michael Ford
027a35dff8
gnu: bitcoin-core: Update to 27.1. 
* gnu/packages/finance.scm (bitcoin-core): Update to 27.1.

Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
Change-Id: Idc6a1c949103904829ed12cc7699d63e5d6d9d37
 2024-06-18 10:56:43 +02:00
Charles
75cc9ff895
gnu: cl-ctype: Update to 0.0.0-3.c514623. 
* gnu/packages/lisp-xyz.scm (sbcl-ctype): Update to 0.0.0-3.c514623.

Change-Id: Ie57ee10342094da4dd5d5a99e00042954ab57060
Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
 2024-06-18 10:56:43 +02:00
Charles
f46e89bf7b
gnu: cl-triads: Update to 0.0.1. 
* gnu/packages/lisp-xyz.scm (sbcl-triads)[source, home-page]: Update URL.
  [inputs]: Add sbcl-charje.loop and sbcl-command-line-args.

Change-Id: I9a6d1d484920c9c76e2f9d74142ecdc82d31dfde
Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
 2024-06-18 10:56:43 +02:00
Nicolas Graves
3bdefd2343
gnu: rmlint: Use default scons. 
* gnu/packages/disk.scm (rmlint): Use default scons.

Change-Id: I84f66876f8acaee719f657ca85693bc23a8d0c4d
Signed-off-by: jgart <jgart@dismail.de>
 2024-06-18 03:23:21 -05:00
Guillaume Le Vaillant
2d5a7bfed5
Merge branch 'lisp-team' 
Change-Id: Ia9a07fff02b01b3470f7abe28bc05a0fd8737416
 2024-06-18 09:44:02 +02:00
Afkhami, Navid
569c213249
gnu: Add r-mcmcglmm. 
* gnu/packages/cran.scm (r-mcmcglmm): New variable.

Change-Id: I1ea9b743af9c9f2a13a5998baa732fa9783766a1
Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2024-06-18 09:42:38 +02:00
Afkhami, Navid
30dbc8e7b0
gnu: Add r-scent. 
* gnu/packages/bioinformatics.scm (r-scent): New variable.

Change-Id: Ie517c0619683590f630013982e831fad528c1dea
 2024-06-18 09:24:53 +02:00
Timotej Lazar
4569350e66
gnu: tig: Update package style. 
* gnu/packages/version-control.scm (tig)[arguments]: Switch to gexps. Move
above input fields.

Change-Id: I32976ccd3f5602e847b1573695356c7e4e6dd9d7
Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2024-06-18 08:41:01 +03:00
Timotej Lazar
a998d660bf
gnu: tig: Update to 2.5.10. 
* gnu/packages/version-control.scm (tig): Update to 2.5.10.
[source]: Switch to git. Drop unbundling snippet.
[native-inputs]: Add autoconf, automake, docbook-xsl, libxml2, pkg-config.

Change-Id: I79d8239e7d0d83bfef42263718e8d2d3a2c83252
Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2024-06-18 08:40:58 +03:00
jgart
b993f4735d
gnu: python-cookiecutter: Update to 2.6.0. 
* gnu/packages/python-xyz.scm (python-cookiecutter): Update to 2.6.0.

Change-Id: I411ecead8162af96ea042b1b4fc3647b7614e53b
 2024-06-17 17:15:19 -05:00
Ben Sturmfels
313a3c17e7
gnu: python-pyld: Update to 2.0.4. 
* gnu/packages/python-xyz.scm (python-pyld): Update to 2.0.4.

Change-Id: Iebd823a94c8f39944162056d451176d112e229e3
Signed-off-by: jgart <jgart@dismail.de>
 2024-06-17 17:15:14 -05:00
Ben Sturmfels
2a499ada72
gnu: Add python-wtforms-sqlalchemy. 
* gnu/packages/python-web.scm (python-wtforms-sqlalchemy): New variable.

Change-Id: Ie94c07d055ec42f08db3a18894e7f6184006764f
Signed-off-by: jgart <jgart@dismail.de>
 2024-06-17 17:15:09 -05:00
Ben Sturmfels
2e819f7f0e
gnu: python-wtforms: Update to 3.1.2. 
* gnu/packages/python-web.scm (python-wtforms): Update to 3.1.2.

Change-Id: Id8119d0536d4d2dfa5c81de37013af68489c5fa5
Signed-off-by: jgart <jgart@dismail.de>
 2024-06-17 17:15:02 -05:00
Artyom V. Poptsov
6515cff981
gnu: kubo: Unbundle more inputs. 
* gnu/packages/ipfs.scm (kubo): Unbundle more inputs.
  [inputs]: Add go-github-com-ipfs-go-block-format,
  go-github-com-ipfs-go-ipld-format, go-github-com-ipfs-go-datastore

Change-Id: Ia2f7a936d2af4f75c65cc0c0dc230982cc646ef8
Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com>
 2024-06-17 22:55:56 +01:00
Sharlatan Hellseher
e535a2c30e
gnu: Add go-github-com-ipfs-go-datastore. 
* gnu/packages/ipfs.scm (go-github-com-ipfs-go-datastore): New variable.

Change-Id: Ia259f74c7274e20b76396a9b8b851002b5e0226c
 2024-06-17 22:55:56 +01:00
Sharlatan Hellseher
3e615b28ff
gnu: go-github-com-ipfs-go-detect-race: Fix import-path. 
*  gnu/packages/ipfs.scm (go-github-com-ipfs-go-detect-race)
[arguments]: <#:import-path>: Adjust as seen in go.mod.

Change-Id: Id712795e504cc6b491cdcd2f12a65fad0b7403b4
 2024-06-17 22:55:55 +01:00
Sharlatan Hellseher
4678b09f44
gnu: Add go-github-com-ipfs-go-ipfs-delay. 
* gnu/packages/ipfs.scm (go-github-com-ipfs-go-ipfs-delay): New variable.

Change-Id: I4938d20d9916d9573e8cb01b9e93ba710c7c5b3c
 2024-06-17 22:55:55 +01:00
Artyom V. Poptsov
dbd078a5c9
gnu: Add go-github-com-ipfs-go-ipld-format. 
* gnu/packages/ipfs.scm (go-github-com-ipfs-go-ipld-format): New variable.

Change-Id: I65aa1c71cf092c4923c9c4484498d6af684b215a
Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com>
 2024-06-17 22:55:55 +01:00