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3682 commits

Author SHA1 Message Date
Mark H Weaver
aad8877d91 gnu: guix: Update development snapshot. 
* gnu/packages/package-management.scm (guix-devel): Update to dd3a42e.
 2015-04-21 21:30:23 -04:00
Mark H Weaver
dd3a42e624 gnu: guix: Don't install in /etc/bash_completion.d within build environment. 
Fixes <http://bugs.gnu.org/20394>.
Patch by Ludovic Courtès <ludo@gnu.org>.

* gnu/packages/package-management.scm (guix)[arguments]: Pass
  "--with-bash-completion-dir" option to configure.
 2015-04-21 19:04:34 -04:00
Mark H Weaver
54b76b60d9 Revert "gnu: libidn: Update to 1.30." 
This reverts commit 8462a03f28.
 2015-04-21 17:47:34 -04:00
Andreas Enge
8462a03f28 gnu: libidn: Update to 1.30. 
* gnu/packages/libidn.scm (libidn): Update to 1.30.
 2015-04-21 22:59:50 +02:00
Andreas Enge
8185519dba gnu: ocrad: Update to 0.25. 
* gnu/packages/ocr.scm (ocrad): Update to 0.25.
 2015-04-21 22:57:29 +02:00
Ricardo Wurmus
6260d1a869 gnu: Add TuxGuitar. 
* gnu/packages/music.scm (tuxguitar): New variable.
 2015-04-21 21:51:38 +02:00
Ricardo Wurmus
8581c81307 gnu: Add SWT. 
* gnu/packages/java.scm (swt): New variable.
 2015-04-21 21:51:38 +02:00
Ricardo Wurmus
e4e5a4d88f gnu: Add eXpress. 
* gnu/packages/bioinformatics.scm (express): New variable.
 2015-04-21 17:57:22 +02:00
Ricardo Wurmus
9794180d5e gnu: Add bamtools. 
* gnu/packages/bioinformatics.scm (bamtools): New variable.
 2015-04-21 17:57:22 +02:00
Ricardo Wurmus
dbf4ed7c91 gnu: Add subread. 
* gnu/packages/bioinformatics.scm (subread): New variable.
 2015-04-21 10:46:23 +02:00
Ludovic Courtès
38cf2ba084 gnu: Remove all #:select from (gnu packages ...) modules. 
This works around Guile bug <http://bugs.gnu.org/15540>.
Reported by Andreas Enge <andreas@enge.fr>.

* gnu/packages/engineering.scm: Don't #:select from (gnu packages ...).
* gnu/packages/gcc.scm: Likewise.
* gnu/packages/package-management.scm: Likewise.
* gnu/packages/photo.scm: Likewise.
* gnu/packages/pulseaudio.scm: Likewise.
* gnu/packages/moe.scm: Likewise, and #:select from (guix licenses)
  instead.
 2015-04-20 15:50:59 +02:00
Ricardo Wurmus
51c649992e gnu: Add sra-tools. 
* gnu/packages/bioinformatics.scm (sra-tools): New variable.
 2015-04-20 15:29:17 +02:00
Ricardo Wurmus
75dd242480 gnu: Add NCBI VDB. 
* gnu/packages/bioinformatics.scm (ncbi-vdb): New variable.
 2015-04-20 15:29:17 +02:00
Ricardo Wurmus
2651a5e695 gnu: Add NGS Java bindings. 
* gnu/packages/bioinformatics.scm (ngs-java): New variable.
 2015-04-20 15:29:16 +02:00
Ricardo Wurmus
282c5087b4 gnu: Add NGS SDK. 
* gnu/packages/bioinformatics.scm (ngs-sdk): New variable.
 2015-04-20 15:28:58 +02:00
Ricardo Wurmus
85c37e29a4 gnu: Add Biopython. 
* gnu/packages/bioinformatics.scm (python-biopython, python2-biopython): New
  variables.
 2015-04-20 15:23:23 +02:00
Eric Bavier
40b084a326 gnu: Adjust latest perl modules to new 'modify-phases' syntax. 
* gnu/packages/compression.scm (perl-compress-raw-zlib)[arguments]:
  Add missing quotes, as needed since commit f8503e2.
* gnu/packages/perl.scm (perl-ipc-run)[arguments]: Likewise.
* gnu/packages/xml.scm (perl-xml-sax)[arguments]: Likewise.
 2015-04-19 21:39:32 -05:00
宋文武
61c21ad319 gnu: Add WebKitGTK+. 
* gnu/packages/webkit.scm: New file.
* gnu-system.am (GNU_SYSTEM_MODULES): Add it.
 2015-04-20 10:34:24 +08:00
Eric Bavier
97b05abe6d gnu: Add JSON-Any. 
* gnu/packages/perl.scm (perl-json-any): New variable.
 2015-04-19 19:48:52 -05:00
Eric Bavier
ae6904dc0b gnu: nix: Propagate perl inputs. 
* gnu/packages/package-management.scm (nix)[inputs]: Move
  perl-www-curl, perl-dbi, perl-dbd-sqlite to...
  [propagated-inputs]: ...this new field
 2015-04-19 19:48:52 -05:00
Eric Bavier
8ac84f230c gnu: Add Sys-Hostname-Long. 
* gnu/packages/perl.scm (perl-sys-hostname-long): New variable.
 2015-04-19 19:48:52 -05:00
Eric Bavier
10ef803e7d gnu: Add Text-Table. 
* gnu/packages/perl.scm (perl-text-table): New variable.
 2015-04-19 19:48:52 -05:00
Eric Bavier
7ae9557181 gnu: Add Text-Aligner. 
* gnu/packages/perl.scm (perl-text-aligner): New variable.
 2015-04-19 19:48:52 -05:00
Eric Bavier
f21671f469 gnu: Add Set-Scalar. 
* gnu/packages/perl.scm (perl-set-scalar): New variable.
 2015-04-19 19:48:52 -05:00
Eric Bavier
b4dcb026d6 gnu: Add SQL-SplitStatement. 
* gnu/packages/databases.scm (perl-sql-splitstatement): New variable.
 2015-04-19 19:48:52 -05:00
Eric Bavier
718c89c1a1 gnu: Add SQL-Tokenizer. 
* gnu/packages/databases.scm (perl-sql-tokenizer): New variable.
 2015-04-19 19:48:52 -05:00
Eric Bavier
8ce2312875 gnu: Add Perl Readonly. 
* gnu/packages/perl.scm (perl-readonly): New variable.
 2015-04-19 19:48:51 -05:00
Eric Bavier
38e62c81ee gnu: Add Perl Net-Amazon-S3. 
* gnu/packages/patches/perl-net-amazon-s3-moose-warning.patch: New patch.
* gnu-system.am (dist_patch_DATA): Add it.
* gnu/packages/web.scm (perl-net-amazon-s3): New variable.
 2015-04-19 19:48:51 -05:00
Eric Bavier
3dd6bee1f2 gnu: Add XML-LibXML. 
* gnu/packages/xml.scm (perl-xml-libxml): New variable.
 2015-04-19 19:48:51 -05:00
Eric Bavier
18b8bbb304 gnu: Add XML-SAX; 
* gnu/packages/xml.scm (perl-xml-sax): New variable.
 2015-04-19 19:48:51 -05:00
Eric Bavier
1ed6d5bc86 gnu: Add XML-SAX-Base. 
* gnu/packages/xml.scm (perl-xml-sax-base): New variable.
 2015-04-19 19:48:51 -05:00
Eric Bavier
b715dbac7b gnu: Add XML-NamespaceSupport. 
* gnu/packages/xml.scm (perl-xml-namespacesupport): New variable.
 2015-04-19 19:48:51 -05:00
Eric Bavier
0955342bf7 gnu: Add Term-ProgressBar-Simple. 
* gnu/packages/perl.scm (perl-term-progressbar-simple): New variable.
 2015-04-19 19:48:51 -05:00
Eric Bavier
0d54bd259c gnu: Add Term-ProgressBar-Quiet. 
* gnu/packages/perl.scm (perl-term-progressbar-quiet): New variable.
 2015-04-19 19:48:51 -05:00
Eric Bavier
4dbac597eb gnu: Add Test-MockObject. 
* gnu/packages/perl.scm (perl-test-mockobject): New variable.
 2015-04-19 19:48:51 -05:00
Eric Bavier
7332618df3 gnu: Add UNIVERSAL-isa. 
* gnu/packages/perl.scm (perl-universal-isa): New variable.
 2015-04-19 19:48:51 -05:00
Eric Bavier
f9671ab689 gnu: Add UNIVERSAL-can. 
* gnu/packages/perl.scm (perl-universal-can): New variable.
 2015-04-19 19:48:51 -05:00
Eric Bavier
cc307bda85 gnu: Add Term-ProgressBar. 
* gnu/packages/perl.scm (perl-term-progressbar): New variable.
 2015-04-19 19:48:51 -05:00
Eric Bavier
70fe0008f7 gnu: Add TermReadKey. 
* gnu/packages/perl.scm (perl-term-readkey): New variable.
 2015-04-19 19:48:51 -05:00
Eric Bavier
cd718b8201 gnu: Add Class-MethodMaker. 
* gnu/packages/perl.scm (perl-class-methodmaker): New variable.
 2015-04-19 19:48:51 -05:00
Eric Bavier
56da2a1abd gnu: Add IO-Interactive. 
* gnu/packages/perl.scm (perl-io-interactive): New variable.
 2015-04-19 19:48:51 -05:00
Eric Bavier
257fa40b23 gnu: Add Term-Encoding. 
* gnu/packages/perl.scm (perl-term-encoding): New variable.
 2015-04-19 19:48:51 -05:00
Eric Bavier
d2401db9ff gnu: Add MooseX-Types-DateTime-MoreCoercions. 
* gnu/packages/perl.scm (perl-moosex-types-datetime-morecoercions):
  New variable.
 2015-04-19 19:48:51 -05:00
Eric Bavier
4f43da182b gnu: Add Time-Duration-Parse. 
* gnu/packages/perl.scm (perl-time-duration-parse): New variable.
 2015-04-19 19:48:50 -05:00
Eric Bavier
a15145d93b gnu: Add Time-Duration. 
* gnu/packages/perl.scm (perl-time-duration): New variable.
 2015-04-19 19:48:50 -05:00
Eric Bavier
bbe81cc0dd gnu: Add Test-Pod-Coverage. 
* gnu/packages/perl.scm (perl-test-pod-coverage): New variable.
 2015-04-19 19:48:50 -05:00
Eric Bavier
29fda459a6 gnu: Add Pod-Coverage. 
* gnu/packages/perl.scm (perl-pod-coverage): New variable.
 2015-04-19 19:48:50 -05:00
Eric Bavier
7300092693 gnu: Add Devel-Symdump. 
* gnu/packages/perl.scm (perl-devel-symdump): New variable.
 2015-04-19 19:48:50 -05:00
Eric Bavier
3e7a86cdc5 gnu: Add MooseX-Types-DateTime. 
* gnu/packages/perl.scm (perl-moosex-types-datetime): New variable.
 2015-04-19 19:48:50 -05:00
Eric Bavier
ef96132220 gnu: Add DateTimeX-Easy. 
* gnu/packages/perl.scm (perl-datetimex-easy): New variable.
 2015-04-19 19:48:50 -05:00