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Author SHA1 Message Date
Tobias Geerinckx-Rice
d4eb8a21a6
gnu: Add python-readlike. 
* gnu/packages/python.scm (python-readlike, python2-readlike):
New public variables.
 2018-10-24 21:34:21 +02:00
Marius Bakke
545da9fd5f
gnu: python-flake8: Update to 3.6.0. 
* gnu/packages/check.scm (python-hypothesis)[native-inputs]: Change
PYTHON-FLAKE8 to PYTHON-FLAKE8-3.5.
* gnu/packages/python.scm (python-flake8, python2-flake8): Rename to ...
(python-flake8-3.5, python2-flake8-3.5): ... this.
(python-flake8, python2-flake8): New public variables.
 2018-10-24 16:34:23 +02:00
Marius Bakke
0c8e255549
gnu: python-attrs: Update to 18.2.0. 
* gnu/packages/python.scm (python-attrs): Update to 18.2.0.
[arguments]: New field.
[native-inputs]: Add PYTHON-PYMPLER.
(python-attrs-bootstrap): Stay on version 17.4.0.
 2018-10-23 17:11:03 +02:00
Marius Bakke
5176795d22
gnu: Add python-pympler. 
* gnu/packages/python.scm (python-pympler, python2-pympler): New public variables.
 2018-10-23 17:11:03 +02:00
Marius Bakke
4cdbffdc2f
gnu: python-stem: Update to 1.7.0. 
* gnu/packages/python.scm (python-stem): Update to 1.7.0.
[arguments]: Remove obsolete phase.
[native-inputs]: Change PYTHON-PEP8 to PYTHON-PYCODESTYLE.
 2018-10-23 00:35:05 +02:00
Marius Bakke
3a23036a0a
gnu: python-datrie: Fix FTBFS with Python 3.7. 
* gnu/packages/python.scm (python-datrie)[arguments]: Add phase 'cythonize'.
 2018-10-22 23:08:14 +02:00
Marius Bakke
c166a88dea
Merge branch 'master' into core-updates 2018-10-22 23:07:16 +02:00
Marius Bakke
63abd1e2a3
gnu: python-pymongo: Update to 3.7.2. 
* gnu/packages/python.scm (python-pymongo): Update to 3.7.2.
 2018-10-22 23:01:19 +02:00
Marius Bakke
47d7c10387
gnu: python-sure: Update to 1.4.11. 
* gnu/packages/python.scm (python-sure): Update to 1.4.11.
 2018-10-22 23:01:19 +02:00
Marius Bakke
9b9aaa57e3
gnu: python-markdown: Update to 3.0.1. 
* gnu/packages/python.scm (python-markdown): Update to 3.0.1.
[arguments]: Remove.
 2018-10-22 23:01:19 +02:00
Marius Bakke
1b50df7d5b
gnu: python-markdown: Update home page. 
* gnu/packages/python.scm (python-markdown)[home-page]: Change to current.
 2018-10-22 23:01:19 +02:00
Marius Bakke
f232c875d2
gnu: python-lazy-object-proxy: Update to 1.3.1. 
* gnu/packages/python.scm (python-lazy-object-proxy): Update to 1.3.1.
 2018-10-22 23:01:18 +02:00
Marius Bakke
b45688313b
gnu: python-mistune: Update to 0.8.4. 
* gnu/packages/python.scm (python-mistune): Update to 0.8.4.
 2018-10-22 23:01:18 +02:00
Luther Thompson
16d212510a
gnu: Add python-ilinkedlist. 
* gnu/packages/python.scm (python-ilinkedlist): New variable.
 2018-10-21 23:54:46 +02:00
Marius Bakke
ffddb42d6c
Merge branch 'master' into core-updates 2018-10-21 18:06:02 +02:00
Marius Bakke
e381ae317c
gnu: python2-bz2file: Inherit arguments from python-bzfile. 
* gnu/packages/python.scm (python-bz2file)[properties]: Remove field.
(python2-bz2file): Use PACKAGE-WITH-PYTHON2.
 2018-10-21 18:03:06 +02:00
Oleg Pykhalov
227da3a4c5
gnu: python-glances: Update to 3.0.2. 
* gnu/packages/python.scm (python-glances): Update to 3.0.2.
 2018-10-20 18:24:23 +03:00
Efraim Flashner
1febc93f9b
Revert "gnu: python-fonttools: Update to 3.30.0." 
This reverts commit 5fb543b3f7.

python2-fonttools has 2700 dependants, only the python3 version is
failing.
 2018-10-18 21:25:36 +03:00
Efraim Flashner
5fb543b3f7
gnu: python-fonttools: Update to 3.30.0. 
* gnu/packages/python.scm (python-fonttools): Update to 3.30.0.
 2018-10-18 21:14:16 +03:00
Marius Bakke
16f14f63db
gnu: Python: Adjust grafts for core-updates merge. 
This adjust the grafts from a55ebe2e3a and
90aeaee861 to apply to Python 2.7.15 and 3.7.0.

* gnu/packages/patches/python2-CVE-2018-1060.patch,
gnu/packages/patches/python2-CVE-2018-1061.patch: Delete files.
* gnu/local.mk (dist_patch_DATA): Remove them.
* gnu/packages/python.scm (python-2/fixed): Remove patches that are already
present in 2.7.15.
(python-3/fixed): Remove obsolete phase.
 2018-10-17 20:53:24 +02:00
Marius Bakke
d02bb02f7d
Merge branch 'master' into core-updates 2018-10-17 20:47:11 +02:00
Marius Bakke
a55ebe2e3a
gnu: python2: Add upstream security fixes. 
This addresses CVE-2018-{1060,1061,14647,1000802}.

* gnu/packages/patches/python2-CVE-2018-1000802.patch,
gnu/packages/patches/python2-CVE-2018-1060.patch,
gnu/packages/patches/python2-CVE-2018-1061.patch,
gnu/packages/patches/python2-CVE-2018-14647.patch: New files.
* gnu/local.mk (dist_patch_DATA): Register it.
* gnu/packages/python.scm (python-2/fixed): New variable.
(python-2.7)[replacement]: New field.
(python2-minimal): Use PACKAGE/INHERIT.
 2018-10-17 20:34:37 +02:00
Marius Bakke
90aeaee861
gnu: python: Fix CVE-2018-14647. 
* gnu/packages/patches/python-CVE-2018-14647.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
* gnu/packages/python.scm (python-3/fixed): New variable.
(python-3.6)[replacement]: New field.
(python-minimal, python-debug, wrap-python3): Use PACKAGE/INHERIT instead of
standard inheritance.
 2018-10-17 20:34:37 +02:00
Efraim Flashner
fb3ff265cd
gnu: python-icalendar: Update to 4.0.3. 
* gnu/packages/python.scm (python-icalendar): Update to 4.0.3.
 2018-10-17 11:40:08 +03:00
Maxim Cournoyer
0731fc1ce7
gnu: python-mimeparse: Update to 1.6.0. 
* gnu/packages/python.scm (python-mimeparse): Update to 1.6.0.
[phases]: Enable tests with a custom check phase.
 2018-10-14 22:02:40 -04:00
Leo Famulari
d7814696b8
gnu: python-configargparse: Use pypi-uri. 
* gnu/packages/python.scm (python-configargparse,
python2-configargparse)[source]: Use pypi-uri.
 2018-10-12 23:42:43 -04:00
Leo Famulari
3c4d307e86
gnu: python-icalendar: Update to 4.0.2. 
* gnu/packages/python.scm (python-icalendar: Update to 4.0.2.
 2018-10-12 23:42:43 -04:00
Efraim Flashner
fd15eb286e
gnu: python-more-itertools: Fix building on 32-bit architectures. 
* gnu/packages/python.scm (python-more-itertools)[arguments]: Add a
custom phase to prevent overflowing on 32-bit architectures.
 2018-10-11 20:55:44 +03:00
Ben Woodcroft
402561ccef
gnu: python2-backports-functools-lru-cache: Update to 1.5. 
* gnu/packages/python.scm (python2-backports-functools-lru-cache): Update to 1.5.
 2018-10-08 16:37:03 +10:00
Marius Bakke
cf6db76d2a
Merge branch 'master' into core-updates 2018-10-05 19:15:39 +02:00
Tobias Geerinckx-Rice
b733dbc0fb
gnu: python-setproctitle: Use INVOKE. 
* gnu/packages/python.scm (python-setproctitle)[arguments]: Substitute
INVOKE for SYSTEM*.
 2018-09-27 03:51:07 +02:00
Marius Bakke
6a0427af6c
Merge branch 'master' into core-updates 2018-09-26 01:11:32 +02:00
Tobias Geerinckx-Rice
06e6b17bd7
gnu: python-pexpect: Use INVOKE. 
* gnu/packages/python.scm (python-pexpect)[arguments]: Substitute INVOKE
for SYSTEM*.
 2018-09-25 11:46:54 +02:00
Tobias Geerinckx-Rice
bbc69023d8
gnu: Add python-semantic-version. 
* gnu/packages/python.scm (python-semantic-version)
(python2-semantic-version): New public variables.
 2018-09-25 11:46:08 +02:00
Tobias Geerinckx-Rice
cd8aa06093
gnu: python-networkx: Use HTTPS home page. 
* gnu/packages/python.scm (python-networkx)[home-page]: Use HTTPS.
 2018-09-24 00:34:03 +02:00
Tobias Geerinckx-Rice
dd29bd4ebc
gnu: python-networkx: Update to 2.2. 
* gnu/packages/python.scm (python-networkx): Update to 2.2.
 2018-09-24 00:34:02 +02:00
Tobias Geerinckx-Rice
68cbec027e
gnu: python-decorator: Update to 4.3.0. 
* gnu/packages/python.scm (python-decorator): Update to 4.3.0.
[arguments]: Run the test suite.
 2018-09-24 00:34:02 +02:00
Tobias Geerinckx-Rice
3715e79ec8
gnu: python-marshmallow: Update to 3.0.0b14. 
* gnu/packages/python.scm (python-marshmallow): Update to 3.0.0b14.
 2018-09-24 00:34:01 +02:00
Tobias Geerinckx-Rice
199d72e327
gnu: python-pyparsing: Update to 2.2.1. 
* gnu/packages/python.scm (python-pyparsing): Update to 2.2.1.
[source]: Use PYPI-URI.
 2018-09-21 19:52:26 +02:00
Tobias Geerinckx-Rice
41e551b2d3
gnu: python-pyparsing: Update home page. 
* gnu/packages/python.scm (python-pyparsing)[home-page]: Update.
 2018-09-21 15:03:49 +02:00
Tobias Geerinckx-Rice
a1d6610e84
gnu: python-rencode: Update to 1.0.5. 
* gnu/packages/python.scm (python-rencode): Update to 1.0.5.
[arguments]: Add a 'delete-bogus-test' phase.
 2018-09-21 13:18:42 +02:00
Tobias Geerinckx-Rice
e36058634d
gnu: python-hdf4: Use INVOKE. 
* gnu/packages/python.scm (python-hdf4)[arguments]: Substitute INVOKE
for SYSTEM*.
 2018-09-21 13:18:42 +02:00
Marius Bakke
2817ac3c18
Merge branch 'master' into core-updates 2018-09-20 13:37:58 +02:00
Tobias Geerinckx-Rice
956bcc8ed2
gnu: python-dirsync: Update to 2.2.3. 
* gnu/packages/python.scm (python-dirsync): Update to 2.2.3.
[native-inputs]: Remove unzip.
 2018-09-17 12:50:20 +02:00
Maxim Cournoyer
511f3be695
gnu: Add python-user-agents. 
* gnu/packages/python.scm (python-user-agents, python2-user-agents): New
variables.

Signed-off-by: 宋文武 <iyzsong@member.fsf.org>
 2018-09-15 12:19:06 +08:00
Maxim Cournoyer
2ee67781ff
gnu: Add python-ua-parser. 
* gnu/packages/python.scm (python-ua-parser, python2-ua-parser): New variables.

Signed-off-by: 宋文武 <iyzsong@member.fsf.org>
 2018-09-15 12:19:06 +08:00
Maxim Cournoyer
935d5ceb9b
gnu: Add python-pycountry. 
* gnu/packages/python.scm (python-pycountry, python2-pycountry): New variables.

Signed-off-by: 宋文武 <iyzsong@member.fsf.org>
 2018-09-15 12:19:06 +08:00
Tobias Geerinckx-Rice
3319817174
gnu: pybind11: Update to 2.2.4. 
* gnu/packages/python.scm (pybind11): Update to 2.2.4.
 2018-09-15 05:17:50 +02:00
Tobias Geerinckx-Rice
5c34d97187
gnu: pybind11: Don't use unstable tarball. 
* gnu/packages/python.scm (pybind11)[source]: Use GIT-FETCH and
GIT-FILE-NAME.
 2018-09-15 05:17:50 +02:00
Tobias Geerinckx-Rice
25bc6370a4
gnu: snakemake: Update to 5.2.4. 
* gnu/packages/python.scm (snakemake): Update to 5.2.4.
[propagated-inputs]: Add python-gitpython.
 2018-09-15 03:38:31 +02:00
Leo Famulari
d763940711
Merge branch 'master' into core-updates 2018-09-13 13:32:39 -04:00
Maxim Cournoyer
8795ce8673
gnu: Add python-black. 
* gnu/packages/python.scm (python-black): New variable.
 2018-09-12 22:16:23 -04:00
Maxim Cournoyer
7e846d07e8
gnu: Add python-toml. 
* gnu/packages/python.scm (python-toml): New variables.
 2018-09-12 22:16:23 -04:00
Maxim Cournoyer
4bd8f4f302
gnu: python-jedi: Update to 0.12.1. 
* gnu/packages/python.scm (python-jedi): Update to 0.12.1.
[propagated-inputs]: Move python-parso here, as it is required at run time.
 2018-09-12 22:16:18 -04:00
Tobias Geerinckx-Rice
a855117c59
gnu: snakemake: Update home page. 
* gnu/packages/python.scm (snakemake)[home-page]: Update.
 2018-09-11 21:12:43 +02:00
Tobias Geerinckx-Rice
9b83c15afe
gnu: snakemake: Update to 5.2.2. 
* gnu/packages/python.scm (snakemake): Update to 5.2.2.
 2018-09-11 21:03:08 +02:00
Marius Bakke
f659e5e379
gnu: python-waf: Update to 2.0.11. 
* gnu/packages/python.scm (python-waf): Update to 2.0.11.
 2018-09-11 13:43:03 +02:00
Tobias Geerinckx-Rice
4b41568fa5
gnu: python-binaryornot: Update to 0.4.4. 
* gnu/packages/python.scm (python-binaryornot): Update to 0.4.4.
 2018-09-10 22:15:20 +02:00
Tobias Geerinckx-Rice
86788cb0c9
gnu: python-parse: Update to 1.8.4. 
* gnu/packages/python.scm (python-parse): Update to 1.8.4.
 2018-09-10 22:15:20 +02:00
Tobias Geerinckx-Rice
c0ea7f5ff4
gnu: python-parse: Mark up description. 
* gnu/packages/python.scm (python-parse)[description]: Use @code{}.
 2018-09-10 22:15:20 +02:00
Tobias Geerinckx-Rice
cc12ac58a2
gnu: python-jedi: Update to 0.12.1. 
* gnu/packages/python.scm (python-jedi): Update to 0.12.1.
[synopsis, description]: Adjust to expanded functionality.
 2018-09-10 22:15:19 +02:00
Tobias Geerinckx-Rice
7a6eaf5ca9
gnu: python-parso: Update to 0.3.1. 
* gnu/packages/python.scm (python-parso): Update to 0.3.1.
 2018-09-10 22:15:19 +02:00
Marius Bakke
242f2711bd
gnu: python-pyzmq: Update to 17.1.2. 
* gnu/packages/python.scm (python-pyzmq): Update to 17.1.2.
 2018-09-10 20:38:48 +02:00
Marius Bakke
b8d165b18a
gnu: python-traitlets: Update to 4.3.2. 
* gnu/packages/python.scm (python-traitlets): Update to 4.3.2.
[native-inputs]: Remove PYTHON-NOSE and PYTHON-MOCK.  Add PYTHON-PYTEST.
[arguments]: Adjust check phase accordingly.
[properties]: New field.
(python2-traitlets)[propagated-inputs]: Add PYTHON2-ENUM34.
 2018-09-10 20:38:48 +02:00
Marius Bakke
9fc445b1a5
gnu: python-pexpect: Update to 4.6.0. 
* gnu/packages/python.scm (python-pexpect): Update to 4.6.0.
 2018-09-10 20:38:48 +02:00
Marius Bakke
fc449407fe
gnu: python-debian: Update home page. 
* gnu/packages/python.scm (python-debian)[home-page]: Set to source
repository.
 2018-09-10 20:27:42 +02:00
Marius Bakke
418ec0adc9
gnu: python-libarchive-c: Update to 2.8. 
* gnu/packages/python.scm (python-libarchive-c): Update to 2.8.
[arguments]: Replace 'check' phase.
[native-inputs]: Add PYTHON-MOCK and PYTHON-PYTEST.
 2018-09-10 20:27:42 +02:00
Marius Bakke
ba0052e8ae
gnu: python-tlsh: Update to 3.4.5. 
* gnu/packages/python.scm (python-tlsh): Update to 3.4.5.
 2018-09-10 20:27:42 +02:00
Ricardo Wurmus
a6a7156aa9
gnu: Add python-dask. 
* gnu/packages/python.scm (python-dask): New variable.
 2018-09-10 16:50:26 +02:00
Ricardo Wurmus
035989c403
gnu: Add python-partd. 
* gnu/packages/python.scm (python-partd): New variable.
 2018-09-10 16:50:26 +02:00
Ricardo Wurmus
c27a9d8a88
gnu: Add python-blosc. 
* gnu/packages/python.scm (python-blosc): New variable.
 2018-09-10 16:50:26 +02:00
Ricardo Wurmus
b2b8226244
gnu: Add python-locket. 
* gnu/packages/python.scm (python-locket): New variable.
 2018-09-10 16:50:26 +02:00
Ricardo Wurmus
930ba31d20
gnu: Add python-cloudpickle. 
* gnu/packages/python.scm (python-cloudpickle): New variable.
 2018-09-10 16:50:26 +02:00
Ricardo Wurmus
3d352cb9cf
gnu: Add python-sortedcontainers. 
* gnu/packages/python.scm (python-sortedcontainers): New variable.
 2018-09-10 16:50:26 +02:00
Ricardo Wurmus
098cb1e9c4
gnu: Add python-cytoolz. 
* gnu/packages/python.scm (python-cytoolz): New variable.
 2018-09-10 16:50:26 +02:00
Ricardo Wurmus
7cd51cd28e
gnu: Add python-toolz. 
* gnu/packages/python.scm (python-toolz): New variable.
 2018-09-10 16:50:25 +02:00
Ricardo Wurmus
943a4cb601
gnu: Add python-multiprocess. 
* gnu/packages/python.scm (python-multiprocess): New variable.
 2018-09-10 16:50:25 +02:00
Ricardo Wurmus
fc62567251
gnu: Add python-dill. 
* gnu/packages/python.scm (python-dill): New variable.
 2018-09-10 16:50:25 +02:00
Tobias Geerinckx-Rice
82d5c7c6de
gnu: python-typing: Update to 3.6.6. 
* gnu/packages/python.scm (python-typing): Update to 3.6.6.
 2018-09-10 15:29:13 +02:00
Marius Bakke
4d19a14e77
gnu: python-llfuse: Update to 1.3.5. 
* gnu/packages/python.scm (python-llfuse): Update to 1.3.5.
 2018-09-10 14:29:40 +02:00
Marius Bakke
073705e725
gnu: python2-contextlib2: Use 'invoke' instead of 'system*'. 
* gnu/packages/python.scm (python2-contextlib2)[arguments]: Use INVOKE.
 2018-09-10 14:28:42 +02:00
Marius Bakke
d06940882d
gnu: python2-contextlib2: Update to 0.5.5. 
* gnu/packages/python.scm (python2-contextlib2): Update to 0.5.5.
[native-inputs]: Add PYTHON2-UNITTEST2.
 2018-09-10 14:25:25 +02:00
Marius Bakke
d4c04e509b
gnu: Remove python-contextlib2. 
This package is part of the Python standard library since version 3.2.

* gnu/packages/python.scm (python-contextlib2): Rename to ...
(python2-contextlib2): ... this.  Remove previous incarnation.
[arguments]: Set #:python.
 2018-09-10 14:24:34 +02:00
Marius Bakke
589aca1c18
gnu: Python: Delete broken test. 
* gnu/packages/python.scm (python-3.7)[source](snippet): Delete test which
may crash some systems.
 2018-09-09 17:59:36 +02:00
Marius Bakke
6cd715adef
gnu: python-scipy: Update to 1.1.0. 
* gnu/packages/python.scm (python-scipy): Update to 1.1.0.
 2018-09-09 17:59:35 +02:00
Marius Bakke
0aeb134850
Merge branch 'master' into core-updates 2018-09-09 17:40:35 +02:00
Ricardo Wurmus
4fd2622df8
gnu: python-tables: Update to 3.4.4. 
* gnu/packages/python.scm (python-tables): Update to 3.4.4.
 2018-09-05 12:01:23 +02:00
Marius Bakke
70dc8db8e7
Merge branch 'master' into core-updates 2018-09-03 19:20:06 +02:00
Marius Bakke
1f7d142000
gnu: python-matplotlib: Update to 2.2.3. 
* gnu/packages/python.scm (python-matplotlib): Update to 2.2.3.
 2018-09-03 19:09:00 +02:00
Ricardo Wurmus
02ddafef55
gnu: python-scipy: Disable broken tests. 
* gnu/packages/python.scm (python-scipy)[arguments]: Skip two broken tests.
 2018-09-03 13:49:32 +02:00
Marius Bakke
53b7c9716e
gnu: python-waf: Update to 2.0.10. 
* gnu/packages/python.scm (python-waf): Update to 2.0.10.
 2018-09-01 12:59:00 +02:00
Ricardo Wurmus
9ce2f07ab6
gnu: python-matplotlib: Use python-pyqt-without-qtwebkit. 
* gnu/packages/python.scm (python-matplotlib)[propagated-inputs]: Replace
python-pyqt with python-pyqt-without-qtwebkit.
 2018-08-31 16:37:56 +02:00
Ricardo Wurmus
22b770ce00
gnu: Add python-anndata. 
* gnu/packages/python.scm (python-anndata): New variable.
 2018-08-29 17:06:13 +02:00
Ricardo Wurmus
d8b8eb3ff5
gnu: Add python-numba. 
* gnu/packages/python.scm (python-numba): New variable.
 2018-08-29 17:06:13 +02:00
Tobias Geerinckx-Rice
f882d7c7c5
gnu: python-apipkg: Update home page. 
* gnu/packages/python.scm (python-apipkg)[home-page]: Update.
 2018-08-28 22:31:00 +02:00
Marius Bakke
61fca0fd22
Merge branch 'master' into core-updates 2018-08-28 01:22:24 +02:00
Leo Famulari
6635a3cc7f
gnu: python-pygit2: Update to 0.26.4. 
* gnu/packages/python.scm (python-pygit2, python2-pygit2): Update to 0.26.4.
[source]: Remove 'python-pygit2-disable-network-tests.patch'.
* gnu/packages/patches/python-pygit2-disable-network-tests.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
 2018-08-27 15:13:46 -04:00
Marius Bakke
57dac1ee93
gnu: python-cairocffi: Update to 0.9.0. 
* gnu/packages/python.scm (python-cairocffi): Update to 0.9.0.
[source](uri): Use PYPI-URI.
[native-inputs]: Add PYTHON-PYTEST-COV and PYTHON-PYTEST-RUNNER.
[arguments]: Remove #:tests? and outdated comment.
 2018-08-27 20:40:17 +02:00
Marius Bakke
a1d3874293
gnu: python-xcffib: Update to 0.6.0. 
* gnu/packages/python.scm (python-xcffib): Update to 0.6.0.
 2018-08-27 20:40:16 +02:00
Marius Bakke
b651a5ab35
gnu: python-pandas: Update to 0.23.4. 
* gnu/packages/python.scm (python-pandas): Update to 0.23.4.
[arguments]: Disable "--strict-data-files" pytest option.  Delete one more
test.  Adjust pytest invocation to be more verbose and skip very slow tests.
 2018-08-27 18:28:29 +02:00