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Author SHA1 Message Date
Kei Kebreau
e84a710b57
gnu: wxmaxima: Update to 21.05.2. 
* gnu/packages/maths.scm (wxmaxima): Update to 21.05.2.
 2021-06-14 13:02:50 -04:00
Kei Kebreau
a029cb5e5c
gnu: maxima: Update to 5.45.0. 
* gnu/packages/maths.scm (maxima): Update to 5.45.0.
 2021-06-14 13:02:50 -04:00
Maxim Cournoyer
ea0a51071e
gnu: Rename qtbase to qtbase-5. 
This change was automated via the following command:

$ git ls-files | xargs sed -i 's/,qtbase)/,qtbase-5)/g'
$ git ls-files | xargs sed -i 's/inherit qtbase)/inherit qtbase-5)/g'
$ git ls-files | xargs sed -i 's/package-version qtbase)/package-version qtbase-5)/g'
$ git checkout etc    # to clear some spurious changes

This is done so the qtbase package can be upgraded to version 6 in the
following commit.
 2021-06-14 00:24:42 -04:00
Jack Hill
b736334732
gnu: qalculate-gtk: Update to 3.19.0. 
* gnu/packages/maths.scm (qalculate-gtk): Update to 3.19.0.
[phases]: Remove 'add-pot-file.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
 2021-06-12 22:58:10 +02:00
Jack Hill
ea1778ebd4
gnu: libqalculate: Update to 3.19.0. 
* gnu/packages/maths (libqalculate): Update to 3.19.0.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
 2021-06-12 22:57:54 +02:00
Julien Lepiller
b94bc3ea30
gnu: Add frama-c. 
* gnu/packages/maths.scm (frama-c): New variable.
 2021-06-02 03:10:12 +02:00
Julien Lepiller
c9b3627d56
gnu: Add why3. 
* gnu/packages/maths.scm (why3): New variable.
 2021-06-02 03:10:04 +02:00
Eric Brown
30713c2c2a
gnu: ipopt: Update to 3.13.4 
* gnu/packages/maths.scm (ipopt): Update to 3.13.4, update URL.
[license]: Change to LICENSE:EPL2.0.

Co-authored-by: Ludovic Courtès <ludo@gnu.org>
 2021-05-28 23:04:43 +02:00
Eric Brown
f5871b19cc
gnu: Add cbc. 
* gnu/packages/maths.scm (cbc): New variable.

Co-authored-by: Ludovic Courtès <ludo@gnu.org>
 2021-05-28 23:04:43 +02:00
Efraim Flashner
0ffac75ece
gnu: qhull: Build position independent. 
* gnu/packages/maths.scm (qhull)[arguments]: Add configure-flag to build
code position independent.
 2021-05-25 17:24:58 +03:00
Efraim Flashner
c942e17c29
gnu: qhull: Link binaries to shared library. 
This drops the package size by nearly 60%.

* gnu/packages/maths.scm (qhull)[arguments]: Add configure-flag to link
binaries to shared library.
 2021-05-25 15:50:57 +03:00
Marius Bakke
9b4f9039e8
gnu: HYPRE: Update source and home page URLs. 
* gnu/packages/maths.scm (hypre)[source]: Change to new repository home.
[home-page]: Follow redirect.
 2021-05-24 22:02:40 +02:00
Marius Bakke
dbcf2b61b1
gnu: Fix erroneous uses of 'package/inherit'. 
These packages use a different source/version from the inherited package, and
thus should not inherit replacements.

* gnu/packages/check.scm (googletest-1.8, python-pytest-runner-2): Use record
inheritance instead of PACKAGE/INHERIT.
* gnu/packages/crates-io.scm (rust-bindgen-0.49, rust-bytes-0.4,
rust-colored-1.9.1, rust-difference-1, rust-docopt-0.8, rust-html5ever-0.23,
rust-http-0.1, rust-http-body-0.1, rust-loom-0.2, rust-loom-0.1,
rust-pulldown-cmark-0.0.8, rust-ring-0.13, rust-rustls-0.12, rust-sct-0.3,
rust-term-0.2, rust-untrusted-0.6, rust-webpki-0.18, rust-webpki-roots-0.17,
rust-webpki-roots-0.14): Likewise.
* gnu/packages/emacs.scm (emacs-next, emacs-next-pgtk, guile-emacs): Likewise.
* gnu/packages/guile.scm (guile-2.2.4): Likewise.
* gnu/packages/maths.scm (hdf5-1.10, hdf5-1.12): Likewise.
* gnu/packages/protobuf.scm (protobuf-3.6, protobuf-3.5, python-protobuf-3.6):
Likewise.
* gnu/packages/python-web.scm (python2-html2text): Likewise.
* gnu/packages/python-xyz.scm (python-pygments/fixed, python2-numpy,
python2-urwid, python2-markdown, python2-fonttools): Likewise.
* gnu/packages/racket.scm (racket): Likewise.
* gnu/packages/sequoia.scm (sequoia4pEp): Likewise.
 2021-05-23 17:49:56 +02:00
Paul A. Patience
d2e531fa43
gnu: Add numdiff. 
* gnu/packages/maths.scm (numdiff): New variable.
 2021-05-21 12:34:33 +02:00
Marius Bakke
b52f635e41
gnu: hdf5: Fix invalid regex range. 
* gnu/packages/maths.scm (hdf5-1.8)[arguments]: Use [a-zA-Z] instead of [a-Z]
as range in regular expression.
 2021-05-18 22:23:48 +02:00
Marius Bakke
c6f1e13aab
gnu: qhull: Update to 2020.2. 
* gnu/packages/maths.scm (qhull): Update to 2020.2.
 2021-05-18 22:23:48 +02:00
Marius Bakke
d6915cb8ae
gnu: arpack-ng@3.3: Don't use unstable source tarball. 
* gnu/packages/maths.scm (arpack-ng-3.3.0)[name, home-page]: Remove.
[source]: Switch to GIT-FETCH.  Inline uses of NAME and HOME-PAGE.
 2021-05-15 19:18:46 +02:00
Marius Bakke
6b496f7b32
gnu: arpack-ng: Update to 3.8.0. 
* gnu/packages/maths.scm (arpack-ng): Update to 3.8.0.
[native-inputs]: Add PKG-CONFIG.
[inputs]: Add EIGEN.
 2021-05-15 19:18:46 +02:00
Tobias Geerinckx-Rice
72e2e8fa29
gnu: Add cglm. 
* gnu/packages/maths.scm (cglm): New public variable.
 2021-05-06 16:46:40 +02:00
Vinicius Monego
adc96e1db3
gnu: Add libcerf. 
* gnu/packages/maths.scm (libcerf): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2021-05-05 16:56:44 +02:00
Konrad Hinsen
36252dff9b
gnu: octave, octave-cli: Explain difference. 
* gnu/packages/maths.scm (octave-cli, octave): Extended synopsis.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2021-05-03 18:26:49 +02:00
Kei Kebreau
685e4733ad
gnu: xaos: Update to 4.2.1. 
* gnu/packages/maths.scm (xaos): Update to 4.2.1.
[arguments]: Patch call to "lrelease" in XaoS.pro.
 2021-04-29 00:44:03 -04:00
Kei Kebreau
235f2c98b9
gnu: wxmaxima: Update to 21.04.0. 
* gnu/packages/maths.scm (wxmaxima): Update to 21.04.0.
 2021-04-21 17:09:37 -04:00
Ludovic Courtès
f67663d669
gnu: blis: Add deprecated aliases. 
Add deprecated aliases for packages removed in the parent commit.

* gnu/packages/maths.scm (blis-sandybridge, blis-haswell, blis-knl): New
variables.
 2021-04-12 12:38:01 +02:00
Philip McGrath
969adb235e
gnu: blis: Update to 0.8.1. 
* gnu/packages/maths.scm (make-blis): Remove internal function.
Inline into ...
(bliss): ... this variable. Update to 0.8.1.
[native-inputs]: Add "python" and "perl".
[arguments]: Adjust 'configure' phase to take advantage of new support
for "configuration families" with runtime hardware detection. Select
configuration automatically based on target systems, and allow
"--blis-config=" in #:configure-flags to override the default.
When building for x86_64, include all supported microarchetecture
specializations. Add "--enable-verbose-make" configure flag for better
build logs. Stop ignoring other flags from #:configure-flags.
Remove explicit #:substitutable? argument: the package is now always
substitutable. Add (srfi srfi-1) to #:modules.
(blis/x86_64): Remove internal macro.
(blis-sandybridge): Remove package: included in 'blis'.
(blis-haswell): Remove package: included in 'blis'.
(blis-knl): Remove package: included in 'blis'.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2021-04-12 12:38:01 +02:00
Brendan Tildesley
c990604cb0
gnu: python-sip: Update to 5.5.0. Add python-sip-4 
* gnu/packages/qt.scm (python-sip): Update to 5.5.0.
(python-sip-4): New variable. Rename the old python-sip to python-sip-4.
(python2-sip): Inherit from python-sip-4.
* gnu/packages/maths.scm (veusz)[native-inputs]: Use python-sip-4.
* gnu/packages/pdf.scm (python-poppler-qt5): Use python-sip-4.
* gnu/packages/geo.scm (qgis)[arguments]: Fix build for python-sip@5.
 2021-04-09 16:09:23 -04:00
Franck Pérignon
5fd046cbfd
gnu: Add scotch and pt-scotch with shared libraries 
* gnu/packages/maths.scm (scotch-shared, pt-scotch-shared): New variables.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2021-04-06 13:54:09 -04:00
Felix Gruber
bab809cef0
gnu: suitesparse: Update to 5.9.0. 
* gnu/packages/maths.scm (suitesparse): Update to 5.9.0.
[arguments]: Use cc-for-target instead of hard-coding gcc.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2021-04-05 15:54:21 +03:00
Ludovic Courtès
de2e36411f
gnu: metis: Add 'release-monitoring-url' property. 
* gnu/packages/maths.scm (metis)[properties]: New field.
 2021-03-29 23:33:40 +02:00
Kei Kebreau
b7c19f2850
gnu: wxmaxima: Update to 21.02.0. 
* gnu/packages/maths.scm (wxmaxima): Update to 21.02.0.
 2021-03-13 00:19:00 -05:00
Efraim Flashner
0f8a646e03
gnu: octave: Update to 6.2.0. 
* gnu/packages/maths.scm (octave): Update to 6.2.0.
[source]: Download tar.xz tarball.
[native-inputs]: Remove lzip.
 2021-03-02 10:46:56 +02:00
Nicolas Goaziou
1ca4b76b52
gnu: slepc: Use HTTPS home page URI. 
* gnu/packages/maths.scm (slepc)[home-page]: Use HTTPS URI.
 2021-02-28 12:01:20 +01:00
Nicolas Goaziou
bebfe06776
gnu: elpa: Use HTTPS home page URI. 
* gnu/packages/maths.scm (elpa)[home-page]: Use HTTPS URI.
 2021-02-28 11:02:20 +01:00
Gerd Heber
f601cdc698
gnu: Add HDF5 1.12.0. 
* gnu/packages/maths.scm (hdf5-1.12): New variable.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2021-02-21 16:03:40 -05:00
Kei Kebreau
311e8d72f1
gnu: wxmaxima: Update to 21.01.0. 
* gnu/packages/maths.scm (wxmaxima): Update to 21.01.0.
[inputs]: Remove libomp.
 2021-02-09 16:28:58 -05:00
Eric Bavier
8effdd1969
gnu: hdf5: Update to 1.8.22. 
Fixes CVE-2018-14033, CVE-2018-11206, CVE-2018-13870, CVE-2018-13869, and
CVE-2018-17435

* gnu/packages/maths.scm (hdf5-1.8): Update to 1.8.22.
* gnu/packages/patches/hdf5-1.8-mpi-deprecations.patch: Delete upstreamed
patch.
* gnu/local/mk (dist_patch_DATA): Remove it.
 2021-02-08 13:25:34 -06:00
Kei Kebreau
f5f642058a
gnu: wxmaxima: Update to 20.12.2. 
* gnu/packages/maths.scm (wxmaxima): Update to 20.12.2.
[arguments]: Remove #:test-target and disable tests.  Remove 'pre-check
phase.
[native-inputs]: Remove xorg-server-for-tests.
[inputs]: Add libomp.
 2021-01-17 18:07:29 -05:00
Kei Kebreau
9aa0a98ea0
gnu: gnuplot: Update to 5.4.1. 
* gnu/packages/maths.scm (gnuplot): Update to 5.4.1.
[arguments]: Set GNUTERM in #:make-flags.
 2021-01-17 18:07:29 -05:00
Efraim Flashner
a2da6074d0
gnu: suitesparse: Install libraries into /lib. 
* gnu/packages/maths.scm (suitesparse)[arguments]: Add to
configure-flags to install programs built with cmake to use 'lib', not
'lib64.'
 2021-01-04 16:15:15 +02:00
Vincent Legoll
75166b29f2
gnu: matio: Update to 1.5.19. 
* gnu/packages/maths.scm (matio): Update to 1.5.19.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2020-12-31 14:50:34 +02:00
Greg Hogan
20cf7f75ff
gnu: octave, octave-cli: Update to 6.1.0. 
* gnu/packages/maths.scm (octave, octave-cli): Update to 6.1.0.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2020-12-22 16:32:29 +01:00
Efraim Flashner
9a6cf550bd
gnu: glpk: Don't build static library. 
* gnu/packages/maths.scm (glpk)[arguments]: Add configure-flag to skip
static library.
 2020-12-17 22:26:30 +02:00
Efraim Flashner
885fe927e7
gnu: glpk: Update to 5.0. 
* gnu/packages/maths.scm (glpk): Update to 5.0.
(glpk-4.65): New variable.
* gnu/packages/algebra.scm (giac)[inputs]: Replace glpk with glpk-4.
 2020-12-17 22:26:30 +02:00
Vinicius Monego
0313617f65
gnu: veusz: Update to 3.3.1. 
* gnu/packages/maths.scm (veusz): Update to 3.3.1.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
 2020-12-13 00:26:53 +01:00
Vinicius Monego
5f40ad9ae2
gnu: sleef: Update to 3.5.1. 
* gnu/packages/maths.scm (sleef): Update to 3.5.1.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
 2020-12-12 21:43:39 +01:00
Eric Bavier
2a23e3f582
gnu: dealii: Update to 9.2.0. 
* gnu/packages/maths.scm (dealii): Update to 9.2.0.
 2020-12-09 13:42:05 -06:00
Ryan Prior
b5c51ae086
gnu: Add tiny-bignum. 
* gnu/packages/maths.scm (tiny-bignum): New variable.

Signed-off-by: Christopher Baines <mail@cbaines.net>
 2020-12-08 09:21:50 +00:00
Eric Bavier
705af5403b
gnu: superlu-dist: Update to 6.4.0. 
* gnu/packages/maths.scm (superlu-dist): Update to 6.4.0
[source]: Use git-fetch, as tarballs are no longer published.
* gnu/packages/patches/superlu-dist-awpm-grid.patch: Remove all but the first
hunk; they are unnecessary.
 2020-12-05 11:14:56 -06:00
Eric Bavier
013cf93234
gnu: scotch: Update to 6.1.0 
* gnu/packages/maths.scm (scotch): Update to 6.1.0.
 2020-12-05 11:14:55 -06:00
Tobias Geerinckx-Rice
2368225019
gnu: metamath: Update to 0.193. 
* gnu/packages/maths.scm (metamath): Update to 0.193.
 2020-12-01 20:55:42 +01:00