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Author SHA1 Message Date
Andy Tai
43b3500620
gnu: opencv: Update to 4.8.0 
* gnu/packages/image-processing.scm (opencv): Update to 4.8.0
[arguments](configure-flags): Turn off flagbuffer support as build fails with
that.
[#:phases](disable-broken-tests): Increase tolerance for one test failure on
x86-64
[inputs]: Add eigen, opencl-headers and openmpi

Signed-off-by: Christopher Baines <mail@cbaines.net>
 2023-08-29 13:47:10 +01:00
Ahmad Draidi
02e32197a8
gnu: looking-glass-client: Update package style. 
* gnu/packages/virtualization.scm (looking-glass-client): Restyle format.
[arguments]: Use G-expressions.  Drop trailing #t from phases.

Signed-off-by: Christopher Baines <mail@cbaines.net>
 2023-08-29 13:47:10 +01:00
Ahmad Draidi
5703c6bcd2
gnu: looking-glass-client: Update to B6. 
* gnu/packages/virtualization.scm (looking-glass-client): Update to B6.
[source]: Use upstream tarball and switch to url-fetch.
[inputs]: Add font-dejavu, libsamplerate, pipewire, pulseaudio. Remove
openssl, sdl2, sdl2-ttf.
[native-inputs]: Remove libconfig.
[arguments]: Add "-DOPTIMIZE_FOR_NATIVE=OFF" to #:configure-flags for
reproducibility and CPU compatibility.
[use-modules]: Add (gnu packages fonts).

Signed-off-by: Christopher Baines <mail@cbaines.net>
 2023-08-29 13:47:10 +01:00
Jack Hill
456790c299
gnu: profanity: Update to 0.14.0. 
* gnu/packagex/messaging.scm (profanity): Update to 0.14.0.

Signed-off-by: Christopher Baines <mail@cbaines.net>
 2023-08-29 13:47:09 +01:00
Arjan Adriaanse
d5e9bbea89
gnu: emacs-php-mode: Update to 1.25.0. 
* gnu/packages/emacs-xyz.scm (emacs-php-mode): Update to 1.25.0.

Signed-off-by: Christopher Baines <mail@cbaines.net>
 2023-08-29 13:47:09 +01:00
dan
005da27028
gnu: waybar: Update to 0.9.20. 
* gnu/packages/wm.scm (waybar): Update to 0.9.20.
[arguments]<:configure-flags>: Disable download missing dependencies.
[inputs]: Add libevdev, pipewire and wireplumber.
(waybar-experimental)[arguments]<:configure-flags>: Extend configure flags.

Signed-off-by: Christopher Baines <mail@cbaines.net>
 2023-08-29 13:46:48 +01:00
Hilton Chain
8371394c0d
gnu: emacs-semi-epg: Update to 1.14.6-246.9370961. 
* gnu/packages/emacs-xyz.scm (emacs-semi-epg): Update to 1.14.6-246.9370961.
[version]: Inline version.
[propagated-inputs]: Move emacs-bbdb-vcard …
[inputs]: … here.

Signed-off-by: Christopher Baines <mail@cbaines.net>
 2023-08-29 13:30:02 +01:00
Hilton Chain
1650e3585b
gnu: emacs-flim-lb: Update to 1.14.9-137.80b8121. 
* gnu/packages/emacs-xyz.scm (emacs-flim-lb): Update to 1.14.9-137.80b8121.
[version]: Inline version.

Signed-off-by: Christopher Baines <mail@cbaines.net>
 2023-08-29 13:30:02 +01:00
Arjan Adriaanse
2687e1918f
gnu: ccid: Update to 1.5.2. 
* gnu/packages/security-token.scm (ccid): Update to 1.5.2.

Signed-off-by: Christopher Baines <mail@cbaines.net>
 2023-08-29 13:28:47 +01:00
Hilton Chain
5a20470800
gnu: smartdns: Update to 43. 
* gnu/packages/dns.scm (smartdns): Update to 43.
[arguments]<#:tests?>: Enable tests.
<#:test-target>: Set to "test".
<#:make-flags>: Set "VER".
<#:phases>: Add phase 'skip-unavailable-tests, 'prepare-test-dir,
'enter-test-dir, 'leave-test-dir.
[native-inputs]: Add googletest, isc-bind:utils.

Signed-off-by: Christopher Baines <mail@cbaines.net>
 2023-08-29 13:28:35 +01:00
Jack Hill
e9981d5a95
gnu: dino: Update to 0.4.3. 
* gnu/packages/messaging.scm (dino): Update to 0.4.3.

Signed-off-by: Christopher Baines <mail@cbaines.net>
 2023-08-29 13:24:00 +01:00
Vagrant Cascadian
5f672aaa0c
gnu: lcsync: Update to 0.2.1. 
* gnu/packages/networking.scm (lcsync): Update to 0.2.1.
[arguments]: #:configure-flags Pass --prefix.
Drop 'remove-network-tests and 'remove-immintrin.h phase.
Add 'use-prefix-from-configure-in-doc-makefile phase.
[inputs]: Add lcrq.
[native-inputs]: Remove simde.

Signed-off-by: Christopher Baines <mail@cbaines.net>
 2023-08-29 13:23:28 +01:00
Vagrant Cascadian
3e354ea9bd
gnu: librecast: Update to 0.7-RC3. 
* gnu/packages/networking.scm (librecast): Update to 0.7-RC3.
[arguments]: Drop 'remove-network-tests phase.

Signed-off-by: Christopher Baines <mail@cbaines.net>
 2023-08-29 13:23:28 +01:00
TakeV
5e3e7c19d8
gnu: bundler: Update to 2.4.18. 
* gnu/packages/ruby.scm (bundler): Update to 2.4.18.

Signed-off-by: Christopher Baines <mail@cbaines.net>
 2023-08-29 13:19:20 +01:00
Christopher Baines
c808af269e
gnu: guix-build-coordinator: Update to 0-88.cbded42. 
* gnu/packages/package-management.scm (guix-build-coordinator): Update to
0-88.cbded42.
 2023-08-29 13:19:12 +01:00
Ludovic Courtès
cf6abf50db
home: services: dicod, syncthing: Import (gnu home services shepherd). 
Fixes <https://issues.guix.gnu.org/65510>.

Without this import, 'shepherd-service-type' is not mapped, leading to
an error about missing 'system' target.

* gnu/home/services/dict.scm,
gnu/home/services/syncthing.scm: Add #:use-module clause.

Reported-by: Morgan Smith <Morgan.J.Smith@outlook.com>
 2023-08-29 11:42:16 +02:00
Nicolas Goaziou
715d203b41
gnu: Add texlive-subfiles. 
* gnu/packages/tex.scm (texlive-subfiles): New variable.
 2023-08-29 10:41:45 +02:00
Nicolas Goaziou
c4819aecee
gnu: Add texlive-import. 
* gnu/packages/tex.scm (texlive-import): New variable.
 2023-08-29 10:41:45 +02:00
Nicolas Goaziou
bef78ff5f3
gnu: Add texlive-svg. 
* gnu/packages/tex.scm (texlive-svg): New variable.
 2023-08-29 10:30:22 +02:00
Frank Pursel
541b1c3e74
gnu: Add ditaa. 
* gnu/packages/java-graphics.scm (ditaa): New variable.

Signed-off-by: Vagrant Cascadian <vagrant@debian.org>
 2023-08-28 15:36:51 -07:00
Frank Pursel
d0c508f451
gnu: Add java-libbatik. 
* gnu/packages/batik.scm (java-libbatik): New variable.

Signed-off-by: Vagrant Cascadian <vagrant@debian.org>
 2023-08-28 15:36:48 -07:00
Frank Pursel
900ceef580
gnu: Add java-jericho-html. 
* gnu/packages/java-xml.scm (java-jericho-html): New variable.

Signed-off-by: Vagrant Cascadian <vagrant@debian.org>
 2023-08-28 15:36:41 -07:00
Ricardo Wurmus
3335903d7d
gnu: r-tximeta: Update to 1.18.1. 
* gnu/packages/bioconductor.scm (r-tximeta): Update to 1.18.1.
 2023-08-28 22:15:47 +02:00
Ricardo Wurmus
99ddc62840
gnu: r-dmrseq: Update to 1.20.1. 
* gnu/packages/bioconductor.scm (r-dmrseq): Update to 1.20.1.
 2023-08-28 22:15:47 +02:00
Ricardo Wurmus
7b93c6d88e
gnu: r-bionero: Update to 1.8.7. 
* gnu/packages/bioconductor.scm (r-bionero): Update to 1.8.7.
 2023-08-28 22:15:47 +02:00
Ricardo Wurmus
86f9555ef0
gnu: r-gviz: Update to 1.44.1. 
* gnu/packages/bioconductor.scm (r-gviz): Update to 1.44.1.
 2023-08-28 22:15:47 +02:00
Ricardo Wurmus
4ab9700e29
gnu: r-delayedmatrixstats: Update to 1.22.5. 
* gnu/packages/bioconductor.scm (r-delayedmatrixstats): Update to 1.22.5.
 2023-08-28 22:15:47 +02:00
Ricardo Wurmus
b200824114
gnu: r-scran: Update to 1.28.2. 
* gnu/packages/bioconductor.scm (r-scran): Update to 1.28.2.
 2023-08-28 22:15:47 +02:00
Ricardo Wurmus
6567ce830f
gnu: r-scuttle: Update to 1.10.2. 
* gnu/packages/bioconductor.scm (r-scuttle): Update to 1.10.2.
 2023-08-28 22:15:47 +02:00
Ricardo Wurmus
362f3cdb8e
gnu: r-s4arrays: Update to 1.0.5. 
* gnu/packages/bioconductor.scm (r-s4arrays): Update to 1.0.5.
[propagated-inputs]: Add r-abind.
 2023-08-28 22:15:47 +02:00
Ricardo Wurmus
790f0569f4
gnu: r-biocpkgtools: Update to 1.18.1. 
* gnu/packages/bioconductor.scm (r-biocpkgtools): Update to 1.18.1.
 2023-08-28 22:15:47 +02:00
Ricardo Wurmus
3602e0b41d
gnu: r-biocviews: Update to 1.68.2. 
* gnu/packages/bioconductor.scm (r-biocviews): Update to 1.68.2.
 2023-08-28 22:15:47 +02:00
Ricardo Wurmus
55e0bd5c7a
gnu: r-flowworkspace: Update to 4.12.2. 
* gnu/packages/bioconductor.scm (r-flowworkspace): Update to 4.12.2.
 2023-08-28 22:15:47 +02:00
Ricardo Wurmus
dc23a12566
gnu: r-rprotobuflib: Update to 2.12.1. 
* gnu/packages/bioconductor.scm (r-rprotobuflib): Update to 2.12.1.
 2023-08-28 22:15:47 +02:00
Ricardo Wurmus
5cc62530b9
gnu: r-ggcyto: Update to 1.28.1. 
* gnu/packages/bioconductor.scm (r-ggcyto): Update to 1.28.1.
 2023-08-28 22:15:47 +02:00
Ricardo Wurmus
36cf325b1e
gnu: r-flowcore: Update to 2.12.2. 
* gnu/packages/bioconductor.scm (r-flowcore): Update to 2.12.2.
 2023-08-28 22:15:47 +02:00
Ricardo Wurmus
ceb698380c
gnu: r-ggtree: Update to 3.8.2. 
* gnu/packages/bioconductor.scm (r-ggtree): Update to 3.8.2.
 2023-08-28 22:15:47 +02:00
Ricardo Wurmus
4998f1538b
gnu: r-treeio: Update to 1.24.3. 
* gnu/packages/bioconductor.scm (r-treeio): Update to 1.24.3.
 2023-08-28 22:15:47 +02:00
Ricardo Wurmus
b336a58135
gnu: r-matrixgenerics: Update to 1.12.3. 
* gnu/packages/bioconductor.scm (r-matrixgenerics): Update to 1.12.3.
 2023-08-28 22:15:47 +02:00
Ricardo Wurmus
59056368d0
gnu: r-diffbind: Update to 3.10.1. 
* gnu/packages/bioconductor.scm (r-diffbind): Update to 3.10.1.
 2023-08-28 22:15:47 +02:00
Ricardo Wurmus
6346338d58
gnu: r-stringdb: Update to 2.12.1. 
* gnu/packages/bioconductor.scm (r-stringdb): Update to 2.12.1.
 2023-08-28 22:15:47 +02:00
Ricardo Wurmus
ba4f688670
gnu: r-spectra: Update to 1.10.2. 
* gnu/packages/bioconductor.scm (r-spectra): Update to 1.10.2.
 2023-08-28 22:15:47 +02:00
Ricardo Wurmus
ce88bfafc3
gnu: r-raggedexperiment: Update to 1.24.2. 
* gnu/packages/bioconductor.scm (r-raggedexperiment): Update to 1.24.2.
 2023-08-28 22:15:47 +02:00
Ricardo Wurmus
8365b201f4
gnu: r-gsva: Update to 1.48.3. 
* gnu/packages/bioconductor.scm (r-gsva): Update to 1.48.3.
 2023-08-28 22:15:47 +02:00
Ricardo Wurmus
dcc2d9a843
gnu: r-genomicfeatures: Update to 1.52.2. 
* gnu/packages/bioconductor.scm (r-genomicfeatures): Update to 1.52.2.
 2023-08-28 22:15:47 +02:00
Ricardo Wurmus
c5ce710a4a
gnu: r-genomeinfodb: Update to 1.36.2. 
* gnu/packages/bioconductor.scm (r-genomeinfodb): Update to 1.36.2.
 2023-08-28 22:15:47 +02:00
Ricardo Wurmus
eca138fd06
gnu: r-dittoseq: Update to 1.12.1. 
* gnu/packages/bioconductor.scm (r-dittoseq): Update to 1.12.1.
 2023-08-28 22:15:47 +02:00
Ricardo Wurmus
00d8ba65aa
gnu: r-affy: Update to 1.78.2. 
* gnu/packages/bioconductor.scm (r-affy): Update to 1.78.2.
 2023-08-28 22:15:47 +02:00
Ricardo Wurmus
d3bebefa9b
gnu: r-dmrcate: Update to 2.14.1. 
* gnu/packages/bioconductor.scm (r-dmrcate): Update to 2.14.1.
[propagated-inputs]: Add r-biomart.
 2023-08-28 22:15:47 +02:00
Ricardo Wurmus
e868377a7d
gnu: r-densvis: Update to 1.10.3. 
* gnu/packages/bioconductor.scm (r-densvis): Update to 1.10.3.
 2023-08-28 22:15:46 +02:00