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Author SHA1 Message Date
Ricardo Wurmus
c9be8171b3
gnu: r-zoo: Update to 1.8-7. 
* gnu/packages/statistics.scm (r-zoo): Update to 1.8-7.
 2020-01-16 06:53:28 +01:00
Ricardo Wurmus
703ae530c5
gnu: r-gplots: Update to 3.0.1.2. 
* gnu/packages/statistics.scm (r-gplots): Update to 3.0.1.2.
 2020-01-16 06:53:27 +01:00
Ricardo Wurmus
b210274a8f
gnu: r-rsqlite: Update to 2.2.0. 
* gnu/packages/statistics.scm (r-rsqlite): Update to 2.2.0.
 2020-01-16 06:53:27 +01:00
Ricardo Wurmus
79f6c0c0bd
gnu: r-catools: Update to 1.17.1.4. 
* gnu/packages/statistics.scm (r-catools): Update to 1.17.1.4.
 2020-01-16 06:53:27 +01:00
Ricardo Wurmus
0d9fed2fe3
gnu: r-hms: Update to 0.5.3. 
* gnu/packages/statistics.scm (r-hms): Update to 0.5.3.
 2020-01-16 06:53:27 +01:00
Ricardo Wurmus
97e20ade4e
gnu: r-bh: Update to 1.72.0-3. 
* gnu/packages/statistics.scm (r-bh): Update to 1.72.0-3.
 2020-01-16 06:53:27 +01:00
Ricardo Wurmus
800219d569
gnu: r-stringi: Update to 1.4.5. 
* gnu/packages/statistics.scm (r-stringi): Update to 1.4.5.
 2020-01-16 06:53:27 +01:00
Ricardo Wurmus
ecdc8bec9b
gnu: r-bit: Update to 1.1-15.1. 
* gnu/packages/statistics.scm (r-bit): Update to 1.1-15.1.
 2020-01-16 06:53:27 +01:00
Ricardo Wurmus
e05b5da86c
gnu: r-mvtnorm: Update to 1.0-12. 
* gnu/packages/statistics.scm (r-mvtnorm): Update to 1.0-12.
[inputs]: Move gfortran from here...
[native-inputs]: ...to here.
 2020-01-16 06:53:27 +01:00
Ricardo Wurmus
62d8020a5e
gnu: r-caret: Update to 6.0-85. 
* gnu/packages/cran.scm (r-caret): Update to 6.0-85.
[propagated-inputs]: Add r-proc.
 2020-01-16 06:53:27 +01:00
Ricardo Wurmus
91afb47195
gnu: r-caret: Do not abbreviate "misc". 
* gnu/packages/cran.scm (r-caret)[description]: Replace "misc" with
"miscellaneous".
 2020-01-16 06:53:27 +01:00
Ricardo Wurmus
8cc9636c5e
gnu: r-caret: Move to (gnu packages cran). 
* gnu/packages/statistics.scm (r-caret): Move variable from here...
* gnu/packages/cran.scm (r-caret): ...to here.
 2020-01-16 06:53:23 +01:00
Mark H Weaver
429c8284d2
gnu: icecat: Fix support for ffmpeg codecs. 
Fixes <https://bugs.gnu.org/38045>.  Thanks to Jakub Kądziołka
<kuba@kadziolka.net> and Amin Bandali <bandali@gnu.org> for their
helpful observations and suggestions.

This is a followup to commit 8e5567195f.

* gnu/packages/gnuzilla.scm (icecat)[inputs]: Add shared-mime-info.
[arguments]: Add elf and binary I/O modules to #:modules.  Add code to
the 'fix-ffmpeg-runtime-linker' phase that sets the sandbox read-path
whitelist to include libavcodec's RUNPATH, as well as shared-mime-info.
 2020-01-16 00:25:45 -05:00
Kei Kebreau
7fa9a685a2
gnu: red-eclipse: Update to 2.0.0. 
* gnu/packages/games.scm (red-eclipse): Update to 2.0.0.
[source]: Remove obsolete patch, and fetch submodules by making "recursive?"
true.
[arguments]: Remove "unpack-data" phase and adjust
"add-store-data-package-path-as-default" phase.
[inputs]: Add freetype and remove data-sources.
* gnu/packages/patches/red-eclipse-remove-gamma-name-hack.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Delete file.
 2020-01-15 22:43:13 -05:00
Ludovic Courtès
65b510bbc4
clojure-utils: Avoid use of '@@'. 
* guix/build/clojure-utils.scm (%doc-regex): Avoid @@, which doesn't
work on Guile 3.
(file-sans-extension): Likewise.
 2020-01-15 23:48:33 +01:00
Ludovic Courtès
0aa6b38695
serialize: Export 'dump-port*'. 
* guix/serialization.scm (dump): Export as 'dump-port*'.
* guix/scripts/challenge.scm (dump-port*): Remove.
 2020-01-15 23:48:33 +01:00
Josh Holland
305c908aac
gnu: Add rcm. 
* gnu/packages/rcm.scm: New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add rcm.scm.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2020-01-15 23:48:33 +01:00
Raghav Gururajan
04b201bb0f
gnu: Add sushi. 
* gnu/packages/gnome.scm (sushi): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2020-01-15 23:48:32 +01:00
Raghav Gururajan
89af09020a
gnu: Add rygel. 
* gnu/packages/gnome.scm (rygel): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2020-01-15 23:48:32 +01:00
Raghav Gururajan
47e8709369
gnu: Add libnma. 
* gnu/packages/gnome.scm (libnma): New variable.

Co-authored-by: Ludovic Courtès <ludo@gnu.org>
 2020-01-15 23:48:32 +01:00
Christopher Howard
bcc8a8fd1e
gnu: Add liquid-dsp. 
* gnu/packages/sdr.scm: New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add it.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2020-01-15 23:48:32 +01:00
Brett Gilio
fcc579e235
gnu: emacs-telega: Update to 0.5.4-4. 
* gnu/packages/emacs-xyz.scm (emacs-telega): Update to 0.5.4-4.
[propagated-inputs]: Add emacs-company to provide completions in telega-based
buffers.
 2020-01-15 16:21:55 -06:00
Tobias Geerinckx-Rice
40b1cee620
gnu: mpop: Mark up description. 
* gnu/packages/mail.scm (mpop)[description]: Use @acronym.
 2020-01-15 23:02:11 +01:00
Tobias Geerinckx-Rice
03d76f8a42
gnu: mercurial: Raise test time-outs. 
Let Guix handle them.  Fixes <https://paste.debian.net/plain/1126159>.

* gnu/packages/version-control.scm (mercurial)[arguments]:
Raise individual test time-outs to 1 day.
 2020-01-15 23:02:11 +01:00
Nicolas Goaziou
1fffba664d
gnu: Add manuskript. 
* gnu/packages/text-editors.scm (manuskript): New variable.
 2020-01-15 22:45:14 +01:00
Tobias Geerinckx-Rice
e2e62bf55a
gnu: mercurial: Run tests verbosely and respect settings. 
* gnu/packages/version-control.scm (mercurial)[arguments]:
Invoke ‘run-tests.py’ directly and verbosely.
Respect #:tests? and parallel-job-count.
 2020-01-15 22:42:17 +01:00
Tobias Geerinckx-Rice
4a30c51eb8
gnu: mpop: Update to 1.4.7. 
* gnu/packages/mail.scm (mpop): Update to 1.4.7.
 2020-01-15 22:42:17 +01:00
Tobias Geerinckx-Rice
fb5ecdecdf
gnu: mpop: Remove unnecessary libidn input. 
gnu/packages/mail.scm (mpop)[inputs]: Remove libidn.
 2020-01-15 22:42:17 +01:00
Nicolas Goaziou
49181f84af
gnu: asymptote: Update to 2.62. 
* gnu/packages/plotutils.scm (asymptote): Update to 2.62.
 2020-01-15 22:10:31 +01:00
Marius Bakke
c950a2a51d
gnu: Add python-xmlschema. 
* gnu/packages/xml.scm (python-xmlschema): New public variable.
 2020-01-15 20:36:34 +01:00
Marius Bakke
55e1475cb5
gnu: python-lxml: Move to (gnu packages xml). 
* gnu/packages/python-xyz.scm (python-lxml): Move from here ...
* gnu/packages/xml.scm (python-lxml): ... to here.
* gnu/packages/django.scm, gnu/packages/drones.scm,
gnu/packages/libreoffice.scm, gnu/packages/nutrition.scm,
gnu/packages/openstack.scm, gnu/packages/pulseaudio.scm,
gnu/packages/python-science.scm, gnu/packages/tryton.scm,
gnu/packages/wireservice.scm: Adjust module imports.
 2020-01-15 20:36:34 +01:00
Marius Bakke
b2205ae4f6
gnu: python-elementpath: Update to 1.3.3. 
* gnu/packages/xml.scm (python-elementpath): Update to 1.3.3.
 2020-01-15 20:36:34 +01:00
Marius Bakke
8fda8b7d6a
gnu: python-elementpath: Move to (gnu packages xml). 
* gnu/packages/python-xyz.scm (python-elementpath): Move from here ...
* gnu/packages/xml.scm (python-elementpath): ... to here.
 2020-01-15 20:36:33 +01:00
Marius Bakke
5efa04dd93
gnu: Add python2-importlib-metadata. 
* gnu/packages/python-xyz.scm (python2-importlib-metadata): New public variable.
 2020-01-15 20:36:33 +01:00
Marius Bakke
f15bdfebc6
gnu: Add python2-zipp. 
* gnu/packages/python-compression.scm (python2-zipp): New public variable.
 2020-01-15 20:36:33 +01:00
Marius Bakke
fd5c264ad8
gnu: Add python2-importlib-resources. 
* gnu/packages/python-xyz.scm (python2-importlib-resources): New public variable.
 2020-01-15 20:36:33 +01:00
Marius Bakke
8f137daf8a
gnu: python-wheel: Update to 0.33.6. 
* gnu/packages/python-xyz.scm (python-wheel): Update to 0.33.6.
[arguments]: Explicitly disable tests (they never ran before).
[native-inputs, properties]: Remove.
(python2-wheel): Use PACKAGE-WITH-PYTHON2.
 2020-01-15 20:36:33 +01:00
Marius Bakke
6b3cef844c
gnu: python-zipp: Update to 1.0.0. 
* gnu/packages/python-compression.scm (python-zipp): Update to 1.0.0.
[propagated-inputs]: Remove PYTHON-RST.LINKER.  Add PYTHON-MORE-ITERTOOLS.
Move PYTHON-CONTEXTLIB2 and PYTHON-PATHLIB2 ...
[native-inputs]: ... here.  Remove PYTHON-SPHINX.
 2020-01-15 20:36:33 +01:00
Marius Bakke
4dc04d11c8
gnu: python-importlib-metadata: Update to 1.4.0. 
* gnu/packages/python-xyz.scm (python-importlib-metadata): Update to 1.4.0.
[propagated-inputs]: Remove PYTHON-CONFIGPARSER, PYTHON-CONTEXTLIB2,
PYTHON-DOCUTILS, PYTHON-PATHLIB2, and PYTHON-RST.LINKER.
[native-inputs]: Remove PYTHON-SPHINX.  Add PYTHON-PACKAGING.
 2020-01-15 20:36:32 +01:00
Marius Bakke
59fa08d6f8
gnu: python-pytest-checkdocs: Add missing input. 
* gnu/packages/python-check.scm (python-pytest-checkdocs)[propagated-inputs]:
Add PYTHON-DOCUTILS.
 2020-01-15 20:36:32 +01:00
Marius Bakke
b244f166b9
gnu: python-sortedcontainers: Update to 2.1.0. 
* gnu/packages/python-xyz.scm (python-sortedcontainers): Update to 2.1.0.
 2020-01-15 20:36:32 +01:00
Marius Bakke
981bd6e69c
gnu: popt: Add a source file name. 
* gnu/packages/popt.scm (popt)[source](file-name): New field.
 2020-01-15 20:36:32 +01:00
Ludovic Courtès
a650ee0baa
gnu: guix: Update to 4aea90b. 
* gnu/packages/package-management.scm (guix): Update to 4aea90b.
 2020-01-15 19:49:47 +01:00
Ludovic Courtès
4aea90b187
import: cpan: Rewrite tests to use an HTTP server instead of mocking. 
* guix/import/cpan.scm (%metacpan-base-url): New variable.
(module->dist-name, cpan-fetch): Refer to it instead of the hard-coded URL.
* tests/cpan.scm ("cpan->guix-package"): Use 'with-http-server' instead
of 'mock'.
 2020-01-15 18:40:43 +01:00
Ludovic Courtès
69f132554c
import: cpan: Rewrite to use 'define-json-mapping'. 
* guix/import/cpan.scm (<cpan-dependency>, <cpan-release>): New
JSON-mapped record types.
(metacpan-url->mirror-url): New procedure.
(cpan-source-url): Rewrite in terms of it.
(cpan-version): Remove.
(cpan-module->sexp): Rewrite to take a <cpan-release> instead of an
alist, and rename 'meta' to 'release'.
[convert-inputs]: Rewrite to use 'cpan-release-dependencies'.
Update calls to 'convert-inputs' to pass a list of symbols.
Replace 'assoc-ref' calls with the appropriate field accessors.
(cpan->guix-package): Rename 'module-meta' to 'release'.
(latest-release): Likewise, and use the appropriate accessors.
* tests/cpan.scm (test-json): Remove "prereqs" record; add "dependency"
list.
("source-url-http", "source-url-https"): Remove.
("metacpan-url->mirror-url, http")
("metacpan-url->mirror-url, https"): New tests.
 2020-01-15 18:40:43 +01:00
Ludovic Courtès
ea6d962b93
More module autoload adjustments. 
This is a followup to 7a0836cffd.

* guix/scripts/package.scm: Adjust binding list of the (guix store roots)
autoload.
* guix/inferior.scm: Adjust binding list of the (guix cache) autoload.
 2020-01-15 18:40:43 +01:00
Ludovic Courtès
5a2639f9cb
Avoid warnings for the 'delete' binding of (guix build utils). 
On Guile 3, importing (guix build utils) leads to warnings such as:

  WARNING: (gnu packages embedded): imported module (guix build utils) overrides core binding `delete'

* gnu/packages/embedded.scm: Select 'alist-replace' from (guix build utils).
* guix/ui.scm: Hide 'delete' from (guix build utils).
 2020-01-15 18:40:43 +01:00
Ludovic Courtès
0030277f79
gnu: Remove unnecessary uses of (guix build utils). 
* gnu/packages/crypto.scm: Remove use of (guix build utils).
* gnu/packages/databases.scm: Likewise.
 2020-01-15 18:40:43 +01:00
Ludovic Courtès
e2922f527e
substitute: 'http-multiple-get' processes each request only once. 
Fixes <https://bugs.gnu.org/39090>.
Reported by Gábor Boskovits <boskovits@gmail.com>.
Fixes a regression introduced in 9e3f9ac3c0.

* guix/scripts/substitute.scm (http-multiple-get): In the "Connection: close"
case, pass (drop requests (+ 1 processed)) to 'loop' as the remaining
REQUESTS value.

Previously, we would pass a list containing duplicates, and thus the
final result would also contain duplicates.  When sent to the daemon,
that list would lead to a daemon error:

  got unexpected path `/gnu/store/…' from substituter
 2020-01-15 18:40:43 +01:00
Mike Rosset
44ce3ebb46
gnu: qutebrowser: Update to 1.9.0. 
* gnu/packages/web-browsers.scm (qutebrowser): Update to 1.9.0.

qutebrowser no longer uses qtwebkit by default. It now defaults to qtwebengine.
 2020-01-15 16:29:45 +01:00