Commit graph

80567 commits

Author SHA1 Message Date
Ricardo Wurmus
9866a9b984
gnu: r-yamss: Update to 1.18.0.
* gnu/packages/bioconductor.scm (r-yamss): Update to 1.18.0.
2021-06-05 09:12:50 +02:00
Ricardo Wurmus
3e1c585523
gnu: r-ebimage: Update to 4.34.0.
* gnu/packages/bioconductor.scm (r-ebimage): Update to 4.34.0.
2021-06-05 09:12:50 +02:00
Ricardo Wurmus
7238b33185
gnu: r-aucell: Update to 1.14.0.
* gnu/packages/bioconductor.scm (r-aucell): Update to 1.14.0.
2021-06-05 09:12:50 +02:00
Ricardo Wurmus
51e7e0145b
gnu: r-allelicimbalance: Update to 1.30.0.
* gnu/packages/bioconductor.scm (r-allelicimbalance): Update to 1.30.0.
2021-06-05 09:12:50 +02:00
Ricardo Wurmus
0cef014f7c
gnu: r-annotationtools: Update to 1.66.0.
* gnu/packages/bioconductor.scm (r-annotationtools): Update to 1.66.0.
2021-06-05 09:12:50 +02:00
Ricardo Wurmus
77a1c4a6aa
gnu: r-abaenrichment: Update to 1.22.0.
* gnu/packages/bioconductor.scm (r-abaenrichment): Update to 1.22.0.
2021-06-05 09:12:50 +02:00
Ricardo Wurmus
b7f6999ee4
gnu: r-gofuncr: Update to 1.12.0.
* gnu/packages/bioconductor.scm (r-gofuncr): Update to 1.12.0.
2021-06-05 09:12:50 +02:00
Ricardo Wurmus
2357a732e5
gnu: r-atacseqqc: Update to 1.16.0.
* gnu/packages/bioconductor.scm (r-atacseqqc): Update to 1.16.0.
2021-06-05 09:12:50 +02:00
Ricardo Wurmus
4627fefcdc
gnu: r-genomicscores: Update to 2.4.0.
* gnu/packages/bioconductor.scm (r-genomicscores): Update to 2.4.0.
2021-06-05 09:12:50 +02:00
Ricardo Wurmus
6e762d2f5a
gnu: r-motifstack: Update to 1.36.0.
* gnu/packages/bioconductor.scm (r-motifstack): Update to 1.36.0.
2021-06-05 09:12:50 +02:00
Ricardo Wurmus
1390f426db
gnu: r-motifbreakr: Update to 2.6.0.
* gnu/packages/bioconductor.scm (r-motifbreakr): Update to 2.6.0.
2021-06-05 09:12:50 +02:00
Ricardo Wurmus
b532b80afb
gnu: r-motifdb: Update to 1.34.0.
* gnu/packages/bioconductor.scm (r-motifdb): Update to 1.34.0.
2021-06-05 09:12:49 +02:00
Ricardo Wurmus
f16dcdc1bf
gnu: r-rgadem: Update to 2.40.0.
* gnu/packages/bioconductor.scm (r-rgadem): Update to 2.40.0.
2021-06-05 09:12:49 +02:00
Ricardo Wurmus
2ace8e39c9
gnu: r-bacon: Update to 1.20.0.
* gnu/packages/bioconductor.scm (r-bacon): Update to 1.20.0.
2021-06-05 09:12:49 +02:00
Ricardo Wurmus
33bf7b57b1
gnu: r-abseqr: Update to 1.10.0.
* gnu/packages/bioconductor.scm (r-abseqr): Update to 1.10.0.
2021-06-05 09:12:49 +02:00
Ricardo Wurmus
822024e6f9
gnu: r-a4: Update to 1.40.0.
* gnu/packages/bioconductor.scm (r-a4): Update to 1.40.0.
2021-06-05 09:12:49 +02:00
Ricardo Wurmus
76fb2de29b
gnu: r-a4base: Update to 1.40.0.
* gnu/packages/bioconductor.scm (r-a4base): Update to 1.40.0.
2021-06-05 09:12:49 +02:00
Ricardo Wurmus
1217dab2e2
gnu: r-a4reporting: Update to 1.40.0.
* gnu/packages/bioconductor.scm (r-a4reporting): Update to 1.40.0.
2021-06-05 09:12:49 +02:00
Ricardo Wurmus
751b4904b0
gnu: r-a4preproc: Update to 1.40.0.
* gnu/packages/bioconductor.scm (r-a4preproc): Update to 1.40.0.
2021-06-05 09:12:49 +02:00
Ricardo Wurmus
319d9dcfb2
gnu: r-a4classif: Update to 1.40.0.
* gnu/packages/bioconductor.scm (r-a4classif): Update to 1.40.0.
2021-06-05 09:12:49 +02:00
Ricardo Wurmus
2aad8aa075
gnu: r-a4core: Update to 1.40.0.
* gnu/packages/bioconductor.scm (r-a4core): Update to 1.40.0.
2021-06-05 09:12:49 +02:00
Ricardo Wurmus
387c023105
gnu: r-annaffy: Update to 1.63.1.
* gnu/packages/bioconductor.scm (r-annaffy): Update to 1.63.1.
[propagated-inputs]: Add r-biocmanager.
2021-06-05 09:12:49 +02:00
Ricardo Wurmus
ad3b03d6ad
gnu: r-mlinterfaces: Update to 1.72.0.
* gnu/packages/bioconductor.scm (r-mlinterfaces): Update to 1.72.0.
[propagated-inputs]: Add r-magrittr.
2021-06-05 09:12:49 +02:00
Ricardo Wurmus
2a7532cca8
gnu: r-clusterexperiment: Update to 2.12.0.
* gnu/packages/bioconductor.scm (r-clusterexperiment): Update to 2.12.0.
[propagated-inputs]: Remove r-rspectra; add r-biocsingular.
2021-06-05 09:12:49 +02:00
Ricardo Wurmus
2b4c784b2b
gnu: r-clusterprofiler: Update to 4.0.0.
* gnu/packages/bioconductor.scm (r-clusterprofiler): Update to 4.0.0.
2021-06-05 09:12:49 +02:00
Ricardo Wurmus
8b0dc8e39c
gnu: r-enrichplot: Update to 1.12.0.
* gnu/packages/bioconductor.scm (r-enrichplot): Update to 1.12.0.
[propagated-inputs]: Add r-ggtree.
2021-06-05 09:12:49 +02:00
Ricardo Wurmus
ca136dd70a
gnu: r-dose: Update to 3.18.0.
* gnu/packages/bioconductor.scm (r-dose): Update to 3.18.0.
2021-06-05 09:12:49 +02:00
Ricardo Wurmus
c8bec0d962
gnu: r-fgsea: Update to 1.18.0.
* gnu/packages/bioconductor.scm (r-fgsea): Update to 1.18.0.
2021-06-05 09:12:49 +02:00
Ricardo Wurmus
1bfe5c274f
gnu: r-sigpathway: Update to 1.60.0.
* gnu/packages/bioconductor.scm (r-sigpathway): Update to 1.60.0.
2021-06-05 09:12:48 +02:00
Ricardo Wurmus
dda291540b
gnu: r-anota: Update to 1.40.0.
* gnu/packages/bioconductor.scm (r-anota): Update to 1.40.0.
2021-06-05 09:12:48 +02:00
Ricardo Wurmus
376d9dd825
gnu: r-gosemsim: Update to 2.18.0.
* gnu/packages/bioconductor.scm (r-gosemsim): Update to 2.18.0.
2021-06-05 09:12:48 +02:00
Ricardo Wurmus
faf60162a3
gnu: r-heatplus: Update to 3.0.0.
* gnu/packages/bioconductor.scm (r-heatplus): Update to 3.0.0.
2021-06-05 09:12:48 +02:00
Ricardo Wurmus
1ade726fdf
gnu: r-varianttools: Update to 1.34.0.
* gnu/packages/bioconductor.scm (r-varianttools): Update to 1.34.0.
2021-06-05 09:12:48 +02:00
Ricardo Wurmus
2c5bba1392
gnu: r-tradeseq: Update to 1.6.0.
* gnu/packages/bioconductor.scm (r-tradeseq): Update to 1.6.0.
[propagated-inputs]: Remove r-clusterexperiment and r-dplyr; add r-matrix, r-matrixstats,
and r-viridis.
2021-06-05 09:12:48 +02:00
Ricardo Wurmus
0c35cde14f
gnu: r-ioniser: Update to 2.16.0.
* gnu/packages/bioconductor.scm (r-ioniser): Update to 2.16.0.
2021-06-05 09:12:48 +02:00
Ricardo Wurmus
ac150da152
gnu: r-linnorm: Update to 2.16.0.
* gnu/packages/bioconductor.scm (r-linnorm): Update to 2.16.0.
2021-06-05 09:12:48 +02:00
Ricardo Wurmus
f1635d65e7
gnu: r-lumi: Update to 2.44.0.
* gnu/packages/bioconductor.scm (r-lumi): Update to 2.44.0.
2021-06-05 09:12:48 +02:00
Ricardo Wurmus
973d33484b
gnu: r-methylumi: Update to 2.38.0.
* gnu/packages/bioconductor.scm (r-methylumi): Update to 2.38.0.
2021-06-05 09:12:48 +02:00
Ricardo Wurmus
a387e1d89c
gnu: r-minfi: Update to 1.38.0.
* gnu/packages/bioconductor.scm (r-minfi): Update to 1.38.0.
2021-06-05 09:12:48 +02:00
Ricardo Wurmus
136adea01b
gnu: r-bumphunter: Update to 1.34.0.
* gnu/packages/bioconductor.scm (r-bumphunter): Update to 1.34.0.
2021-06-05 09:12:48 +02:00
Ricardo Wurmus
18c81e5615
gnu: r-siggenes: Update to 1.66.0.
* gnu/packages/bioconductor.scm (r-siggenes): Update to 1.66.0.
2021-06-05 09:12:48 +02:00
Ricardo Wurmus
7e29fb98e1
gnu: r-illuminaio: Update to 0.34.0.
* gnu/packages/bioconductor.scm (r-illuminaio): Update to 0.34.0.
2021-06-05 09:12:48 +02:00
Ricardo Wurmus
23d3d7af06
gnu: r-geoquery: Update to 2.60.0.
* gnu/packages/bioconductor.scm (r-geoquery): Update to 2.60.0.
2021-06-05 09:12:48 +02:00
Ricardo Wurmus
6db7802b5b
gnu: r-scone: Update to 1.16.0.
* gnu/packages/bioconductor.scm (r-scone): Update to 1.16.0.
[propagated-inputs]: Add r-matrixgenerics and r-singlecellexperiment.
2021-06-05 09:12:48 +02:00
Ricardo Wurmus
611024367b
gnu: r-scdd: Update to 1.16.0.
* gnu/packages/bioconductor.scm (r-scdd): Update to 1.16.0.
2021-06-05 09:12:48 +02:00
Ricardo Wurmus
d7390d7c63
gnu: r-noiseq: Update to 2.36.0.
* gnu/packages/bioconductor.scm (r-noiseq): Update to 2.36.0.
2021-06-05 09:12:47 +02:00
Ricardo Wurmus
716ac28a58
gnu: r-monocle: Update to 2.20.0.
* gnu/packages/bioconductor.scm (r-monocle): Update to 2.20.0.
2021-06-05 09:12:47 +02:00
Ricardo Wurmus
12ec22ca50
gnu: r-mast: Update to 1.18.0.
* gnu/packages/bioconductor.scm (r-mast): Update to 1.18.0.
2021-06-05 09:12:47 +02:00
Ricardo Wurmus
79928c5e58
gnu: r-icobra: Update to 1.20.0.
* gnu/packages/bioconductor.scm (r-icobra): Update to 1.20.0.
2021-06-05 09:12:47 +02:00
Ricardo Wurmus
2ed5a0844e
gnu: r-ihw: Update to 1.20.0.
* gnu/packages/bioconductor.scm (r-ihw): Update to 1.20.0.
2021-06-05 09:12:47 +02:00