Commit graph

42191 commits

Author SHA1 Message Date
Pierre Neidhardt
37099f5844
gnu: Add emacs-webfeeder.
* gnu/packages/emacs-xyz.scm (emacs-webfeeder): New variable.
2019-03-27 11:33:09 +01:00
Ricardo Wurmus
58d8225ddb
gnu: trim-galore: Add pigz.
* gnu/packages/bioinformatics.scm (trim-galore)[inputs]: Add pigz.
[arguments]: Embed reference to pigz.
2019-03-27 11:32:08 +01:00
Ricardo Wurmus
5f1e31094d
gnu: trim-galore: Fix test for Python.
* gnu/packages/bioinformatics.scm (trim-galore)[arguments]: Replace
"configure" phase to skip ill-advised test for Python.
2019-03-27 11:28:38 +01:00
Ricardo Wurmus
2a509880d4
gnu: hdf-java: Adjust indentation.
* gnu/packages/maths.scm (hdf-java): Adjust indentation.
2019-03-27 10:47:34 +01:00
Ricardo Wurmus
64dc8b0bfd
gnu: hdf-java: Fix build.
* gnu/packages/maths.scm (hdf-java)[arguments]: Fix copying from automake;
substitute embedded hdf5 version number.
2019-03-27 10:13:46 +01:00
Ricardo Wurmus
9286c0f7e8
gnu: hdf-java: Use INVOKE.
* gnu/packages/maths.scm (hdf-java)[arguments]: Unconditionally return #T from
build phases.
2019-03-27 10:12:57 +01:00
Ricardo Wurmus
dfe420ee46
gnu: r-rhdf5lib: Update to 1.4.3.
* gnu/packages/bioinformatics.scm (r-rhdf5lib): Update to 1.4.3.
2019-03-27 09:33:50 +01:00
Ricardo Wurmus
3b6c77445b
gnu: r-genomicfeatures: Update to 1.34.7.
* gnu/packages/bioinformatics.scm (r-genomicfeatures): Update to 1.34.7.
2019-03-27 09:33:50 +01:00
Ricardo Wurmus
a12c527d3c
gnu: r-hdf5r: Update to 1.1.1.
* gnu/packages/cran.scm (r-hdf5r): Update to 1.1.1.
2019-03-27 09:33:50 +01:00
Ricardo Wurmus
a7332d1a2f
gnu: r-caret: Update to 6.0-82.
* gnu/packages/statistics.scm (r-caret): Update to 6.0-82.
2019-03-27 09:33:50 +01:00
Ricardo Wurmus
733b3c59da
gnu: r-gtable: Update to 0.3.0.
* gnu/packages/statistics.scm (r-gtable): Update to 0.3.0.
2019-03-27 09:33:50 +01:00
Ricardo Wurmus
fc64504f2d
gnu: grantlee: Delete broken tests.
* gnu/packages/qt.scm (grantlee)[arguments]: Add phase "delete-broken-tests".
2019-03-27 09:33:50 +01:00
Kei Kebreau
4fee5ec049
gnu: Add adanaxis-mush and adanaxisgpl.
* gnu/packages/games.scm (adanaxis-mush, adanaxisgpl): New variables.
2019-03-26 20:59:15 -04:00
Pierre Langlois
4dcf221c85
gnu: qjackctl: Re-enable xunique.
Version 0.5.6 of qjackctl appears to have fixed the xunique
bug that was causing X hanging when using tiling window managers.

See d54a1da43f/ChangeLog (L9)

* gnu/packages/audio.scm (qjackctl)[arguments]: Remove "--disable-xunique"
from configure-flags.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2019-03-27 00:09:38 +01:00
Ricardo Wurmus
dd2f0cdba1
gnu: python-django-overextends: Use INVOKE.
* gnu/packages/django.scm (python-django-overextends)[arguments]: Use INVOKE.
2019-03-27 00:04:07 +01:00
Ricardo Wurmus
de6be02379
gnu: python-django-contact-form: Use INVOKE.
* gnu/packages/django.scm (python-django-contact-form)[arguments]: Use INVOKE.
2019-03-27 00:03:31 +01:00
Ricardo Wurmus
7cdc7e579b
gnu: fritzing: Update to 0.9.3b.
* gnu/packages/engineering.scm (fritzing): Update to 0.9.3b.
[source]: Fetch from git.
[arguments]: Use INVOKE and adjust configure phase.
[inputs]: Add libgit2; fetch fritzing-parts-db via git.
2019-03-26 23:58:33 +01:00
Ricardo Wurmus
68631e037b
gnu: ldc: Use INVOKE.
* gnu/packages/dlang.scm (ldc)[arguments]: Use INVOKE.
2019-03-26 23:13:54 +01:00
Ricardo Wurmus
4b81d5c4bc
gnu: ldc-bootstrap: Use INVOKE.
* gnu/packages/dlang.scm (ldc-bootstrap)[arguments]: Use INVOKE and
unconditionally return #T from build phase.
2019-03-26 23:13:54 +01:00
Ricardo Wurmus
27cd31e6a5
gnu: open-adventure: Use INVOKE.
* gnu/packages/games.scm (open-adventure)[arguments]: Use INVOKE.
2019-03-26 23:13:54 +01:00
Ricardo Wurmus
7b67bb1fab
gnu: 0ad: Use INVOKE.
* gnu/packages/games.scm (0ad)[arguments]: Use INVOKE.
2019-03-26 23:13:51 +01:00
Pierre Neidhardt
c771b799bd
gnu: Add jami-client-gnome.
* gnu/packages/telephony.scm (jami-client-gnome): New variable.
2019-03-26 19:17:01 +01:00
Pierre Neidhardt
b630967247
gnu: Add libringclient.
* gnu/packages/telephony.scm (libringclient): New variable.
2019-03-26 19:17:01 +01:00
Pierre Neidhardt
1bfcb19bc3
gnu: Add libring.
* gnu/packages/telephony.scm (libring): New variable.
2019-03-26 19:17:01 +01:00
Pierre Neidhardt
915829e662
gnu: Add pjproject-jami.
* gnu/packages/telephony.scm (pjproject-jami): New variable.
2019-03-26 19:17:01 +01:00
Pierre Neidhardt
bd4b6f4164
gnu: Add pjproject.
* gnu/packages/telephony.scm (pjproject): New variable.
2019-03-26 19:17:01 +01:00
Ludovic Courtès
952afb6f8c
environment: Create /etc/group in containers.
Reported by Pierre Neidhardt <mail@ambrevar.xyz>.

* guix/scripts/environment.scm (launch-environment/container): Create
GROUPS and call 'write-group'.
* tests/guix-environment-container.sh: Test it.
2019-03-26 18:11:52 +01:00
Ludovic Courtès
8a9922bdee
environment: Use (gnu build accounts) for /etc/passwd handling.
* guix/scripts/environment.scm (launch-environment/container): Remove
call to 'mock-passwd'; instantiate a <password-entry> instead.  Call
'write-passwd' to write the pasword database instead of using custom
code.
(mock-passwd): Remove.
* tests/guix-environment-container.sh: Test 'getpwuid'.
2019-03-26 18:11:52 +01:00
Ludovic Courtès
ec8bc4a34e
build-self: Disable position recording.
'guix pull -n' goes roughly from 40s to 35s.

* build-aux/build-self.scm (build-program): Add call to 'read-disable'.
2019-03-26 18:11:52 +01:00
Ludovic Courtès
863519f660
gnu: current-guix: Delay effectful bits.
* gnu/packages/package-management.scm (current-guix): Delay 'repository-root'.
2019-03-26 18:11:52 +01:00
Ricardo Wurmus
28d32817d8
gnu: python-scanpy: Update to 1.4.
* gnu/packages/bioinformatics.scm (python-scanpy): Update to 1.4.
[source]: Fetch from git.
[arguments]: Disable broken tests.
[native-inputs]: Add python-pytest.
[home-page]: Use HTTPS.
2019-03-26 18:06:35 +01:00
Ricardo Wurmus
8c9372c124
gnu: python-anndata: Update to 0.6.18.
* gnu/packages/python-xyz.scm (python-anndata): Update to 0.6.18.
2019-03-26 17:13:13 +01:00
Ricardo Wurmus
fdc316f374
gnu: trim-galore: Update to 0.6.1.
* gnu/packages/bioinformatics.scm (trim-galore): Update to 0.6.1.
[arguments]: Adjust patching.
2019-03-26 16:40:42 +01:00
Ricardo Wurmus
9ac17c6242
gnu: cutadapt: Update to 2.1.
* gnu/packages/bioinformatics.scm (cutadapt): Update to 2.1.
[source]: Fetch from pypi.
[native-inputs]: Add python-setuptools-scm.
2019-03-26 16:40:42 +01:00
Ricardo Wurmus
24d6498972
gnu: python-xopen: Update to 0.5.0.
* gnu/packages/python-xyz.scm (python-xopen): Update to 0.5.0.
2019-03-26 16:40:42 +01:00
Pierre Neidhardt
6994e67436
etc: Add "rename" snippet.
* etc/snippets/text-mode/guix-commit-message-rename-package: New file.
2019-03-26 14:18:12 +01:00
Pierre Neidhardt
f95e33a7ad
gnu: edgar: Rename package to the-legend-of-edgar.
* gnu/packages/games.scm (edgar): Define in terms of
'deprecated-package'.
(the-legend-of-edgar): New variable, formerly known as "edgar".
2019-03-26 13:44:01 +01:00
Pierre Neidhardt
b1aee9fce2
gnu: btanks: Rename package to battle-tanks.
* gnu/packages/games.scm (btanks): Define in terms of
'deprecated-package'.
(battle-tanks): New variable, formerly known as "btanks".
2019-03-26 13:44:00 +01:00
Pierre Neidhardt
f6a21d61de
gnu: tome4: Rename package to tales-of-maj-eyal.
* gnu/packages/games.scm (tome4): Define in terms of
'deprecated-package'.
(tales-of-maj-eyal): New variable, formerly known as "tome4".
2019-03-26 13:44:00 +01:00
Pierre Neidhardt
24a67aef2a
gnu: crawl-tiles: Rename package to dungeon-crawl-stone-soup-tiles.
* gnu/packages/games.scm (crawl-tiles): Define in terms of
'deprecated-package'.
(dungeon-crawl-stone-soup-tiles): New variable, formerly known as "crawl-tiles".
2019-03-26 13:44:00 +01:00
Pierre Neidhardt
36a0b5b48c
gnu: crawl: Rename package to dungeon-crawl-stone-soup.
* gnu/packages/games.scm (crawl): Define in terms of
'deprecated-package'.
(dungeon-crawl-stone-soup): New variable, formerly known as "crawl".
2019-03-26 13:44:00 +01:00
Pierre Neidhardt
8b6e2bc15f
gnu: fillets-ng: Rename package to fish-fillets-ng.
* gnu/packages/games.scm (fillets-ng): Define in terms of
'deprecated-package'.
(fish-fillets-ng): New variable, formerly known as "fillets-ng".
2019-03-26 13:44:00 +01:00
Pierre Neidhardt
6639295f2f
gnu: kiki: Rename package to kiki-the-nano-bot.
* gnu/packages/games.scm (kiki): Define in terms of
'deprecated-package'.
(kiki-the-nano-bot): New variable, formerly known as "kiki".
2019-03-26 13:44:00 +01:00
Pierre Neidhardt
184f5c8db1
gnu: starfighter: Rename package to project-starfighter.
* gnu/packages/games.scm (starfighter): Define in terms of
'deprecated-package'.
(project-starfighter): New variable, formerly known as "starfighter".
2019-03-26 13:44:00 +01:00
Pierre Neidhardt
ecdb1348ad
gnu: wesnoth-server: Rename package to the-battle-for-wesnoth-server.
* gnu/packages/games.scm (wesnoth-server): Define in terms of
'deprecated-package'.
(the-battle-for-wesnoth-server): New variable, formerly known as "wesnoth-server".
2019-03-26 13:44:00 +01:00
Pierre Neidhardt
375cb94130
gnu: wesnoth: Rename package to the-battle-for-wesnoth.
* gnu/packages/games.scm (wesnoth): Define in terms of
'deprecated-package'.
(the-battle-for-wesnoth): New variable, formerly known as "wesnoth".
2019-03-26 13:44:00 +01:00
Pierre Neidhardt
c91ed484d0
gnu: abbaye: Rename package to l-abbaye-des-morts.
* gnu/packages/games.scm (abbaye): Define in terms of
'deprecated-package'.
(l-abbaye-des-morts): New variable, formerly known as "abbaye".
2019-03-26 13:44:00 +01:00
Pierre Neidhardt
c97e4d8bbe
gnu: gnubg: Rename package to gnubackgammon.
* gnu/packages/games.scm (gnubg): Define in terms of
'deprecated-package'.
(gnubackgammon): New variable, formerly known as "gnubg".
2019-03-26 13:44:00 +01:00
Pierre Neidhardt
973bd8a62c
gnu: cataclysm-dda: Rename package to cataclysm-dark-days-ahead.
* gnu/packages/games.scm (cataclysm-dda): Define in terms of
'deprecated-package'.
(cataclysm-dark-days-ahead): New variable, formerly known as "cataclysm-dda".
2019-03-26 13:44:00 +01:00
Pierre Neidhardt
df42e0f9c9
gnu: armagetronad: Rename package to armagetron-advanced.
* gnu/packages/games.scm (armagetronad): Define in terms of
'deprecated-package'.
(armagetron-advanced): New variable, formerly known as "armagetronad".
2019-03-26 13:44:00 +01:00