Ricardo Wurmus
|
d0f3427433
|
gnu: Remove duplicate definition of r-heatmaply.
* gnu/packages/cran.scm (r-heatmaply): Remove duplicate.
|
2018-06-05 13:59:15 +02:00 |
|
Ricardo Wurmus
|
1ee581973a
|
gnu: r-heatmaply: Add r-knitr.
* gnu/packages/cran.scm (r-heatmaply)[propagated-inputs]: Add r-knitr.
|
2018-06-05 13:51:27 +02:00 |
|
Ricardo Wurmus
|
6da3aa3763
|
gnu: r-heatmaply: Add r-knitr.
* gnu/packages/cran.scm (r-heatmaply)[propagated-inputs]: Add r-knitr.
|
2018-06-05 13:50:29 +02:00 |
|
Ricardo Wurmus
|
e53152c72d
|
gnu: dropseq-tools: Remove failing phase.
* gnu/packages/bioinformatics.scm (dropseq-tools)[arguments]: Delete
"generate-jar-indices" phase.
|
2018-06-05 13:12:13 +02:00 |
|
Ricardo Wurmus
|
0c68f7fd9b
|
gnu: java-bouncycastle: Disable tests.
* gnu/packages/java.scm (java-bouncycastle)[arguments]: Disable tests.
|
2018-06-05 12:49:41 +02:00 |
|
Ricardo Wurmus
|
9cc66d75a2
|
gnu: pigx-scrnaseq: Use only one variant of Picard.
* gnu/packages/bioinformatics.scm (pigx-scrnaseq)[inputs]: Replace
"java-picard" with "java-picard-2.10.3".
|
2018-06-05 11:26:34 +02:00 |
|
Ricardo Wurmus
|
1f94ba9408
|
gnu: java-picard: Delete failing build phase.
* gnu/packages/bioinformatics.scm (java-picard)[arguments]: Delete
"generate-jar-indices" phase.
|
2018-06-05 11:26:08 +02:00 |
|
Ricardo Wurmus
|
1ed386fc26
|
gnu: java-cisd-jhdf5: Delete failing build phase.
* gnu/packages/java.scm (java-cisd-jhdf5)[arguments]: Delete build phase
"generate-jar-indices".
|
2018-06-05 11:17:03 +02:00 |
|
Ricardo Wurmus
|
a993ad833e
|
gnu: java-picard-1.113: Delete failing build phase.
* gnu/packages/bioinformatics.scm (java-picard-1.113)[arguments]: Delete
"generate-jar-indices" build phase.
|
2018-06-05 11:15:21 +02:00 |
|
Ricardo Wurmus
|
e847f402c1
|
gnu: java-picard-2.10.3: Delete failing build phase.
* gnu/packages/bioinformatics.scm (java-picard-2.10.3)[arguments]: Delete
generate-jar-indices phase.
|
2018-06-05 11:14:38 +02:00 |
|
Ricardo Wurmus
|
d7e6fb6d7e
|
Merge branch 'master' into core-updates
|
2018-06-05 11:09:39 +02:00 |
|
Ricardo Wurmus
|
71c495c941
|
gnu: r-rtracklayer: Update to 1.40.3.
* gnu/packages/bioinformatics.scm (r-rtracklayer): Update to 1.40.3.
|
2018-06-05 10:40:42 +02:00 |
|
Ricardo Wurmus
|
fb8c17baef
|
gnu: r-ranger: Update to 0.10.1.
* gnu/packages/statistics.scm (r-ranger): Update to 0.10.1.
|
2018-06-05 10:40:42 +02:00 |
|
Ricardo Wurmus
|
c9a879ed54
|
gnu: r-np: Update to 0.60-8.
* gnu/packages/cran.scm (r-np): Update to 0.60-8.
|
2018-06-05 10:40:42 +02:00 |
|
Ricardo Wurmus
|
83d5c2e106
|
gnu: t-series: Update to 0.10-45.
* gnu/packages/cran.scm (t-series): Update to 0.10-45.
|
2018-06-05 10:40:42 +02:00 |
|
Ricardo Wurmus
|
c152c6b361
|
gnu: r-ksamples: Update to 1.2-8.
* gnu/packages/cran.scm (r-ksamples): Update to 1.2-8.
|
2018-06-05 10:40:42 +02:00 |
|
Ricardo Wurmus
|
d19e0690b9
|
gnu: r-methylkit: Update to 1.6.1.
* gnu/packages/bioinformatics.scm (r-methylkit): Update to 1.6.1.
|
2018-06-05 10:40:42 +02:00 |
|
Ricardo Wurmus
|
0da6afa286
|
gnu: r-bamsignals: Update to 1.12.1.
* gnu/packages/bioinformatics.scm (r-bamsignals): Update to 1.12.1.
|
2018-06-05 10:40:42 +02:00 |
|
Ricardo Wurmus
|
66ece08d05
|
Merge branch 'master' into core-updates
|
2018-06-05 09:59:27 +02:00 |
|
Ricardo Wurmus
|
0ebef06dbe
|
build-system/r: Update to Bioconductor 3.7.
This is a follow-up to 41f17554d8.
* guix/build-system/r.scm (bioconductor-uri): Update to version 3.7.
|
2018-06-05 09:58:52 +02:00 |
|
Tobias Geerinckx-Rice
|
4bf0a1f8d1
|
gnu: p11-kit: Update to 0.23.12.
* gnu/packages/tls.scm (p11-kit): Update to 0.23.12.
|
2018-06-05 03:19:48 +02:00 |
|
Mark H Weaver
|
8b71684a20
|
gnu: elfutils: Disable test suite on MIPS.
* gnu/packages/elf.scm (elfutils)[arguments]: Add (#:tests? #f) on MIPS.
|
2018-06-04 21:19:35 -04:00 |
|
Tobias Geerinckx-Rice
|
46fce96881
|
gnu: beets: Return #t from phases.
* gnu/packages/music.scm (beets)[arguments]: Substitute INVOKE for
SYSTEM* and return #t from all phases.
|
2018-06-05 03:19:26 +02:00 |
|
Tobias Geerinckx-Rice
|
123f86d898
|
gnu: nano: Update to 2.9.8.
* gnu/packages/nano.scm (nano): Update to 2.9.8.
|
2018-06-05 03:18:46 +02:00 |
|
Tobias Geerinckx-Rice
|
0d35a95417
|
gnu: python-pycurl: Update to 7.43.0.2.
* gnu/packages/python-web.scm (python-pycurl): Update to 7.43.0.2.
|
2018-06-05 03:18:46 +02:00 |
|
Tobias Geerinckx-Rice
|
4682d48363
|
gnu: fvwm: Update to 2.6.8.
* gnu/packages/fvwm.scm (fvwm): Update to 2.6.8.
|
2018-06-05 03:01:17 +02:00 |
|
Tobias Geerinckx-Rice
|
f7b53e6855
|
gnu: perl-parse-yapp: Update to 1.21.
* gnu/packages/perl.scm (perl-parse-yapp): Update to 1.21.
|
2018-06-05 03:01:17 +02:00 |
|
Tobias Geerinckx-Rice
|
b5dfccd7b6
|
gnu: perl-text-balanced: Update to 2.03.
* gnu/packages/perl.scm (perl-text-balanced): Update to 2.03.
[source]: Update URI.
|
2018-06-05 03:01:16 +02:00 |
|
Tobias Geerinckx-Rice
|
971b8381ff
|
gnu: perl-posix-strftime-compiler: Update to 0.42.
* gnu/packages/perl.scm (perl-posix-strftime-compiler): Update to
0.42.
|
2018-06-05 03:01:07 +02:00 |
|
Tobias Geerinckx-Rice
|
27f89be5c9
|
gnu: perl-moosex-methodattributes: Update to 0.31.
* gnu/packages/perl.scm (perl-moosex-methodattributes): Update to
0.31.
|
2018-06-05 03:00:58 +02:00 |
|
Tobias Geerinckx-Rice
|
91cb6eaf52
|
gnu: perl-module-install: Update to 1.19.
* gnu/packages/perl.scm (perl-module-install): Update to 1.19.
[source]: Update URI.
|
2018-06-05 01:31:32 +02:00 |
|
Tobias Geerinckx-Rice
|
ed2e354b79
|
gnu: perl-memoize-expirelru: Update to 0.56.
* gnu/packages/perl.scm (perl-memoize-expirelru): Update to 0.56.
[source]: Update URI.
|
2018-06-05 01:31:32 +02:00 |
|
Tobias Geerinckx-Rice
|
01c6607af9
|
gnu: ccid, pcsc-lite: Move away from alioth.debian.org.
* gnu/packages/security-token.scm (ccid, pcsc-lite)[source, home-page]:
Update upstream URI.
|
2018-06-04 18:27:59 +02:00 |
|
Rutger Helling
|
19b662ea7c
|
gnu: ranger: Enable image support.
* gnu/packages/disk.scm (ranger)[inputs]: Add 'w3m'.
[arguments]: Add wrapper for W3MIMGDISPLAY_PATH environment variable.
|
2018-06-04 16:35:03 +02:00 |
|
Tobias Geerinckx-Rice
|
fd17434249
|
gnu: lz4: Use HTTPS home page.
* gnu/packages/compression.scm (lz4)[home-page]: Use HTTPS.
|
2018-06-04 15:35:48 +02:00 |
|
Tobias Geerinckx-Rice
|
b6315bc0d2
|
gnu: thermald: Update to 1.7.2.
* gnu/packages/admin.scm (thermald): Update to 1.7.2.
[arguments]: Remove Upstart kluge as promised.
|
2018-06-04 15:35:47 +02:00 |
|
Tobias Geerinckx-Rice
|
49d85a19fb
|
gnu: pdfgrep: Update to 2.1.1.
* gnu/packages/pdf.scm (pdfgrep): Update to 2.1.1.
|
2018-06-04 15:35:47 +02:00 |
|
Tobias Geerinckx-Rice
|
e1345dec67
|
gnu: lxqt-build-tools: Update to 0.5.0.
* gnu/packages/lxqt.scm (lxqt-build-tools): Update to 0.5.0.
|
2018-06-04 15:35:47 +02:00 |
|
Tobias Geerinckx-Rice
|
12eadf5649
|
gnu: perl-libintl-perl: Update to 1.29.
* gnu/packages/perl.scm (perl-libintl-perl): Update to 1.29.
|
2018-06-04 15:35:47 +02:00 |
|
Tobias Geerinckx-Rice
|
a0b9612fc9
|
gnu: perl-hash-multivalue: Update to 0.16.
* gnu/packages/perl.scm (perl-hash-multivalue): Update to 0.16.
[source]: Update URI.
|
2018-06-04 15:35:46 +02:00 |
|
Tobias Geerinckx-Rice
|
92299d669a
|
gnu: perl-file-pushd: Update to 1.016.
* gnu/packages/perl.scm (perl-file-pushd): Update to 1.016.
|
2018-06-04 15:35:46 +02:00 |
|
Tobias Geerinckx-Rice
|
cf25329661
|
gnu: perl-exception-class: Update to 1.44.
* gnu/packages/perl.scm (perl-exception-class): Update to 1.44.
|
2018-06-04 15:35:46 +02:00 |
|
Tobias Geerinckx-Rice
|
4f6c01e78a
|
gnu: perl-datetime-timezone: Update to 2.19.
* gnu/packages/perl.scm (perl-datetime-timezone): Update to 2.19.
|
2018-06-04 15:35:46 +02:00 |
|
Tobias Geerinckx-Rice
|
a1b16662bc
|
gnu: perl-test-without-module: Update to 0.20.
* gnu/packages/perl-check.scm (perl-test-without-module): Update to 0.20.
|
2018-06-04 15:35:45 +02:00 |
|
Tobias Geerinckx-Rice
|
e40ab7382e
|
gnu: perl-datetime: Update to 1.49.
* gnu/packages/perl.scm (perl-datetime): Update to 1.49.
|
2018-06-04 15:35:45 +02:00 |
|
Tobias Geerinckx-Rice
|
854cf20647
|
gnu: perl-context-preserve: Update to 0.03.
* gnu/packages/perl.scm (perl-context-preserve): Update to 0.03.
|
2018-06-04 15:35:45 +02:00 |
|
Tobias Geerinckx-Rice
|
30c070d1ae
|
gnu: perl-class-load-xs: Update to 0.10.
* gnu/packages/perl.scm (perl-class-load-xs): Update to 0.10.
[native-inputs]: Replace perl-test-requires with perl-test-needs.
Add perl-test-without-module.
|
2018-06-04 15:35:45 +02:00 |
|
Tobias Geerinckx-Rice
|
d2fe431870
|
gnu: perl-class-load: Update to 0.24.
* gnu/packages/perl.scm (perl-class-load): Update to 0.24.
[native-inputs]: Replace perl-test-requires with perl-test-needs.
Add perl-test-without-module.
|
2018-06-04 15:35:44 +02:00 |
|
Tobias Geerinckx-Rice
|
d017dfaaf3
|
gnu: sent: Say ‘plain text’.
‘Plaintext’ is a crypto term. ‘Slideshow’ is apparently acceptable.
* gnu/packages/suckless.scm (sent)[synopsis, description]: Add spaces.
|
2018-06-04 15:35:44 +02:00 |
|
Tobias Geerinckx-Rice
|
4ae9274ae9
|
gnu: snd: Version documentation directory.
* gnu/packages/audio.scm (snd)[arguments]: Install documentation to the
conventional location. Remove redundant MKDIR-P. Align cosmetically.
|
2018-06-04 15:35:44 +02:00 |
|