* doc/guix.texi (Invoking guix package): Remove explanation of
'specifications->manifest' and 'package->development-manifest'. Link to
"Writing Manifests".
(Inferiors): Likewise.
(Invoking guix shell): Add anchor and link to 'package->development-manifest'.
(Invoking guix pack): Likewise.
(Writing Manifests): New section.
(Using TeX and LaTeX): Link to "Writing Manifests".
* gnu/packages/python-xyz.scm (python-matplotlib): Update to 3.5.2.
[propagated-inputs]: Move after 'arguments' field. Use new style and re-order.
[inputs]: Order lexicographically.
[native-inputs]: Use new style.
[phases]{fix-and-disable-failing-tests}: Fix indentation.
Delete the 'lib/matplotlib/tests/test_animation.py' test.
{check}: Skip the test_lazy_auto_backend_selection test.
Renaming rationale: pudb can also be used as a Python library (like pdb).
* gnu/packages/python-xyz.scm (python-pudb): Update to 2022.1.1.
[phases]{check}: Remove obsolete 'add-installed-pythonpath' call. Invoke
pytest verbosely.
[native-inputs]: Remove python-numpy.
[propagated-inputs]: Apply guix style.
(pudb): Define as a deprecated alias to python-pudb.
* gnu/packages/python-xyz.scm (python-numpy-documentation): Relocate next to
the python-numpy package in the module. Inherit from python-numpy.
[version, source, build-system, home-page, license]: Remove fields, now
inherited.
[phases]{add-gnu-freefont-to-texmf}: New phase.
{install}: Patch conf.py to allow building the info manual. Set HOME. Copy
the whole generated HTML directory. Parallelize documentation build.
[native-inputs]: Use new style. Add font-gnu-freefont, fontconfig,
python-breathe, python-ipython, python-pandas, python-pydata-sphinx-theme,
python-scipy, python-sphinx-panels, texlive-bin, texlive-cbfonts,
texlive-cm-super, texlive-greek-fontenc, texlive-latex-expdlist,
texlive-polyglossia and texlive-xindy. Remove pkg-config, the previous "texlive"
updmap.cfg package, scipy-sphinx-theme, and do not inherit the native inputs
of python-numpy.
[synopsis]: Refine.
[description]: Expound a bit.
* gnu/packages/sphinx.scm (python-sphinxext-opengraph): Update to 0.6.3.
[phases]{check}: Streamline and invoke pytest verbosely.
[native-inputs]: Indent on a single line.
* gnu/packages/sphinx.scm (python-sphinx-autodoc-typehints): Update to 1.18.1.
[source]: Use git.
[argument]: New field.
[propagated-inputs]: Add python-sphinx.
[native-inputs]: Remove python-dataclasses and python-sphinx. Add
python-nptyping and python-setuptools-scm.
* gnu/packages/sphinx.scm (python-sphinx-cloud-sptheme): Update to 1.10.1.
[source]: Update source to point to new Mercurial repository.
[arguments]: Delete field, enabling tests (which fail due to Jinja2 >= 3.1).
[native-inputs]: Move python-sphinx to...
[propagated-inputs]: ... here.
[description]: Do not use raw quotes to decorate text.
* gnu/packages/sphinx.scm (python-sphinx): Update to 4.5.0.
[phases]{check}: Set HOME to /tmp.
[propagated-inputs]: Add python-importlib-metadata.
[native-inputs]: Add python-cython.
* gnu/packages/python-web.scm (python-flask-login): Update to 0.6.0.
[arguments]: New field.
[native-inputs]: Remove python-coverage, python-pycodestyle and
python-pyflakes.
* gnu/packages/python-web.scm (python-flask-wtf): Update to 1.0.1.
[propagated-inputs]: Remove python-flask-babel and python-babel.
Add python-flask and python-itsdangerous.
[phases]{check}: Provide the tests directory argument to pytest. Ignore
project pytest configs and make it verbose.
[native-inputs]: Delete python-pytest-checkdocs, python-pytest-cov and
python-pytest-flake8.
* gnu/packages/pdf.scm (weasyprint): Update to 54.3.
[source]: Update git URL.
[phases]: Use gexps.
{disable-linters}: Delete phase.
{register-dejavu-font}: Remove obsolete phase.
{patch-library-paths}: Adjust for code changes. Use search-input-file.
{check}: Streamline and use xdist.
{build, install}: Override to o a PEP 517 build.
[inputs]: Add harfbuzz.
[propagated-inputs]: Add python-fonttools-full, python-pillow and
python-pydyf.
[native-inputs]: Remove python-pytest-cov and python-pytest-runner.
Add ghostscript, python-flit-core, python-pypa-build, python-pytest and
python-pytest-xdist.
