Commit graph

114283 commits

Author SHA1 Message Date
Ricardo Wurmus
fdf3453dad
gnu: r-pcaexplorer: Update to 2.26.0.
* gnu/packages/bioconductor.scm (r-pcaexplorer): Update to 2.26.0.
2023-04-29 20:27:57 +02:00
Ricardo Wurmus
e408cd70e8
gnu: r-oscope: Update to 1.30.0.
* gnu/packages/bioconductor.scm (r-oscope): Update to 1.30.0.
2023-04-29 20:27:57 +02:00
Ricardo Wurmus
18d4032d2a
gnu: r-organismdbi: Update to 1.42.0.
* gnu/packages/bioconductor.scm (r-organismdbi): Update to 1.42.0.
[native-inputs]: Add r-knitr.
2023-04-29 20:27:57 +02:00
Ricardo Wurmus
3c31e017e2
gnu: r-organism-dplyr: Update to 1.28.0.
* gnu/packages/bioconductor.scm (r-organism-dplyr): Update to 1.28.0.
2023-04-29 20:27:57 +02:00
Ricardo Wurmus
394c951ba2
gnu: r-mzr: Update to 2.34.0.
* gnu/packages/bioconductor.scm (r-mzr): Update to 2.34.0.
2023-04-29 20:27:57 +02:00
Ricardo Wurmus
3e05ea0edb
gnu: r-mzid: Update to 1.38.0.
* gnu/packages/bioconductor.scm (r-mzid): Update to 1.38.0.
2023-04-29 20:27:57 +02:00
Ricardo Wurmus
6d09227e1f
gnu: r-msnid: Update to 1.34.0.
* gnu/packages/bioconductor.scm (r-msnid): Update to 1.34.0.
2023-04-29 20:27:57 +02:00
Ricardo Wurmus
6bbb3bedb1
gnu: r-msnbase: Update to 2.26.0.
* gnu/packages/bioconductor.scm (r-msnbase): Update to 2.26.0.
2023-04-29 20:27:57 +02:00
Ricardo Wurmus
5c6355ca35
gnu: r-msa: Update to 1.32.0.
* gnu/packages/bioconductor.scm (r-msa): Update to 1.32.0.
2023-04-29 20:27:57 +02:00
Ricardo Wurmus
ba6ed3ff40
gnu: r-mutationalpatterns: Update to 3.10.0.
* gnu/packages/bioconductor.scm (r-mutationalpatterns): Update to 3.10.0.
2023-04-29 20:27:57 +02:00
Ricardo Wurmus
37e95f3c9c
gnu: r-muscat: Update to 1.14.0.
* gnu/packages/bioconductor.scm (r-muscat): Update to 1.14.0.
2023-04-29 20:27:57 +02:00
Ricardo Wurmus
da92987a4b
gnu: r-mmuphin: Update to 1.14.0.
* gnu/packages/bioconductor.scm (r-mmuphin): Update to 1.14.0.
[propagated-inputs]: Remove r-biocstyle.
2023-04-29 20:27:57 +02:00
Ricardo Wurmus
2ebeeeb438
gnu: r-methylkit: Update to 1.26.0.
* gnu/packages/bioconductor.scm (r-methylkit): Update to 1.26.0.
2023-04-29 20:27:57 +02:00
Ricardo Wurmus
15efeebe53
gnu: r-metaneighbor: Update to 1.20.0.
* gnu/packages/bioconductor.scm (r-metaneighbor): Update to 1.20.0.
2023-04-29 20:27:57 +02:00
Ricardo Wurmus
0ee6b4203d
gnu: r-metagenomeseq: Update to 1.42.0.
* gnu/packages/bioconductor.scm (r-metagenomeseq): Update to 1.42.0.
2023-04-29 20:27:57 +02:00
Ricardo Wurmus
380e27f153
gnu: r-maser: Update to 1.18.0.
* gnu/packages/bioconductor.scm (r-maser): Update to 1.18.0.
2023-04-29 20:27:57 +02:00
Ricardo Wurmus
3c8d7bd3c6
gnu: r-manor: Update to 1.72.0.
* gnu/packages/bioconductor.scm (r-manor): Update to 1.72.0.
2023-04-29 20:27:57 +02:00
Ricardo Wurmus
6e5c2c48df
gnu: r-makecdfenv: Update to 1.76.0.
* gnu/packages/bioconductor.scm (r-makecdfenv): Update to 1.76.0.
2023-04-29 20:27:56 +02:00
Ricardo Wurmus
4d1208e654
gnu: r-made4: Update to 1.74.0.
* gnu/packages/bioconductor.scm (r-made4): Update to 1.74.0.
2023-04-29 20:27:56 +02:00
Ricardo Wurmus
343036f151
gnu: r-maaslin2: Update to 1.13.0.
* gnu/packages/bioconductor.scm (r-maaslin2): Update to 1.13.0.
[propagated-inputs]: Remove r-mumin and r-rmarkdown.
[arguments]: Remove.
2023-04-29 20:27:56 +02:00
Ricardo Wurmus
d1da543257
gnu: r-limma: Update to 3.56.0.
* gnu/packages/bioconductor.scm (r-limma): Update to 3.56.0.
2023-04-29 20:27:56 +02:00
Ricardo Wurmus
b962e908a0
gnu: r-keggrest: Update to 1.40.0.
* gnu/packages/bioconductor.scm (r-keggrest): Update to 1.40.0.
2023-04-29 20:27:56 +02:00
Ricardo Wurmus
2c32ed3955
gnu: r-interactivedisplaybase: Update to 1.38.0.
* gnu/packages/bioconductor.scm (r-interactivedisplaybase): Update to 1.38.0.
2023-04-29 20:27:56 +02:00
Ricardo Wurmus
ab9cdb4082
gnu: r-impute: Update to 1.74.0.
* gnu/packages/bioconductor.scm (r-impute): Update to 1.74.0.
2023-04-29 20:27:56 +02:00
Ricardo Wurmus
8d8a7d55e2
gnu: r-rhtslib: Update to 2.2.0.
* gnu/packages/bioconductor.scm (r-rhtslib): Update to 2.2.0.
2023-04-29 20:27:56 +02:00
Ricardo Wurmus
c3882920fd
gnu: r-hpar: Update to 1.42.0.
* gnu/packages/bioconductor.scm (r-hpar): Update to 1.42.0.
[propagated-inputs]: Add r-experimenthub.
2023-04-29 20:27:56 +02:00
Ricardo Wurmus
fdc4c55da2
gnu: r-harshlight: Update to 1.72.0.
* gnu/packages/bioconductor.scm (r-harshlight): Update to 1.72.0.
2023-04-29 20:27:56 +02:00
Ricardo Wurmus
f7a3988fc7
gnu: r-gseabase: Update to 1.62.0.
* gnu/packages/bioconductor.scm (r-gseabase): Update to 1.62.0.
2023-04-29 20:27:56 +02:00
Ricardo Wurmus
57e4aab4ee
gnu: r-gostats: Update to 2.66.0.
* gnu/packages/bioconductor.scm (r-gostats): Update to 2.66.0.
[native-inputs]: Add r-knitr.
2023-04-29 20:27:56 +02:00
Ricardo Wurmus
96613abcc5
gnu: r-globaltest: Update to 5.54.0.
* gnu/packages/bioconductor.scm (r-globaltest): Update to 5.54.0.
2023-04-29 20:27:56 +02:00
Ricardo Wurmus
5cb6453b43
gnu: r-glad: Update to 2.64.0.
* gnu/packages/bioconductor.scm (r-glad): Update to 2.64.0.
2023-04-29 20:27:56 +02:00
Ricardo Wurmus
a6f4e6e7fb
gnu: r-genomicranges: Update to 1.52.0.
* gnu/packages/bioconductor.scm (r-genomicranges): Update to 1.52.0.
2023-04-29 20:27:56 +02:00
Ricardo Wurmus
7c75371b19
gnu: r-genomicfiles: Update to 1.36.0.
* gnu/packages/bioconductor.scm (r-genomicfiles): Update to 1.36.0.
[native-inputs]: Add r-knitr.
2023-04-29 20:27:56 +02:00
Ricardo Wurmus
25ffc3d9ef
gnu: r-genomicfeatures: Update to 1.52.0.
* gnu/packages/bioconductor.scm (r-genomicfeatures): Update to 1.52.0.
2023-04-29 20:27:56 +02:00
Ricardo Wurmus
8e72841e03
gnu: r-genomicalignments: Update to 1.36.0.
* gnu/packages/bioconductor.scm (r-genomicalignments): Update to 1.36.0.
2023-04-29 20:27:56 +02:00
Ricardo Wurmus
d87887a2ba
gnu: r-genomeinfodb: Update to 1.36.0.
* gnu/packages/bioconductor.scm (r-genomeinfodb): Update to 1.36.0.
2023-04-29 20:27:56 +02:00
Ricardo Wurmus
dac6f08730
gnu: r-genomation: Update to 1.32.0.
* gnu/packages/bioconductor.scm (r-genomation): Update to 1.32.0.
2023-04-29 20:27:56 +02:00
Ricardo Wurmus
ff563c9a60
gnu: r-geneoverlap: Update to 1.36.0.
* gnu/packages/bioconductor.scm (r-geneoverlap): Update to 1.36.0.
2023-04-29 20:27:56 +02:00
Ricardo Wurmus
d7a10c3d52
gnu: r-genefilter: Update to 1.82.0.
* gnu/packages/bioconductor.scm (r-genefilter): Update to 1.82.0.
[propagated-inputs]: Remove r-biocgenerics; add r-matrixgenerics.
2023-04-29 20:27:56 +02:00
Ricardo Wurmus
70c3d4ac37
gnu: r-gage: Update to 2.50.0.
* gnu/packages/bioconductor.scm (r-gage): Update to 2.50.0.
2023-04-29 20:27:56 +02:00
Ricardo Wurmus
476042884c
gnu: r-fastseg: Update to 1.46.0.
* gnu/packages/bioconductor.scm (r-fastseg): Update to 1.46.0.
2023-04-29 20:27:56 +02:00
Ricardo Wurmus
3ce5803cac
gnu: r-ensembldb: Update to 2.24.0.
* gnu/packages/bioconductor.scm (r-ensembldb): Update to 2.24.0.
2023-04-29 20:27:56 +02:00
Ricardo Wurmus
f9b6a2ad85
gnu: r-enmix: Update to 1.36.0.
* gnu/packages/bioconductor.scm (r-enmix): Update to 1.36.0.
2023-04-29 20:27:56 +02:00
Ricardo Wurmus
cbe7726d68
gnu: r-edger: Update to 3.42.0.
* gnu/packages/bioconductor.scm (r-edger): Update to 3.42.0.
2023-04-29 20:27:56 +02:00
Ricardo Wurmus
2a1f12e3d1
gnu: r-edaseq: Update to 2.34.0.
* gnu/packages/bioconductor.scm (r-edaseq): Update to 2.34.0.
2023-04-29 20:27:56 +02:00
Ricardo Wurmus
59cecee237
gnu: r-dittoseq: Update to 1.12.0.
* gnu/packages/bioconductor.scm (r-dittoseq): Update to 1.12.0.
2023-04-29 20:27:56 +02:00
Ricardo Wurmus
70784f1dcf
gnu: r-dirichletmultinomial: Update to 1.42.0.
* gnu/packages/bioconductor.scm (r-dirichletmultinomial): Update to 1.42.0.
2023-04-29 20:27:55 +02:00
Ricardo Wurmus
876c2dcb74
gnu: r-diffcyt: Update to 1.20.0.
* gnu/packages/bioconductor.scm (r-diffcyt): Update to 1.20.0.
2023-04-29 20:27:55 +02:00
Ricardo Wurmus
f327d05ecc
gnu: r-dexseq: Update to 1.46.0.
* gnu/packages/bioconductor.scm (r-dexseq): Update to 1.46.0.
2023-04-29 20:27:55 +02:00
Ricardo Wurmus
dc78185fc7
gnu: r-deseq2: Update to 1.40.0.
* gnu/packages/bioconductor.scm (r-deseq2): Update to 1.40.0.
[propagated-inputs]: Remove r-geneplotter.
[native-inputs]: Add r-rmarkdown.
2023-04-29 20:27:55 +02:00