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Author SHA1 Message Date
Leo Famulari
a3a5b01240
gnu: Add go-github-com-edsrzf-mmap-go. 
* gnu/packages/syncthing.scm (go-github-com-edsrzf-mmap-go): New variable.
 2017-10-12 21:22:45 -04:00
Leo Famulari
ab3e15899c
gnu: Add go-github-com-d4l3k-messagediff. 
* gnu/packages/syncthing.scm (go-github-com-d4l3k-messagediff): New variable.
 2017-10-12 21:22:45 -04:00
Leo Famulari
1e28085e76
gnu: Add go-github-com-calmh-xdr. 
* gnu/packages/syncthing.scm (go-github-com-calmh-xdr): New variable.
 2017-10-12 21:22:45 -04:00
Leo Famulari
add56f3469
gnu: Add go-github-com-calmh-du. 
* gnu/packages/syncthing.scm (go-github-com-calmh-du): New variable.
 2017-10-12 21:22:44 -04:00
Leo Famulari
67b468182a
gnu: Add go-github-com-bkaradzic-go-lz4. 
* gnu/packages/syncthing.scm (go-github-com-bkaradzic-go-lz4): New variable.
 2017-10-12 21:22:44 -04:00
Leo Famulari
56a37713c3
gnu: Add go-github-com-audriusbutkevicius-go-nat-pmp. 
* gnu/packages/syncthing.scm: New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add it.
 2017-10-12 21:22:44 -04:00
Leo Famulari
91525b486c
build: Add the Go build system. 
* guix/build-system/go.scm,
guix/build/go-build-system.scm: New files.
* Makefile.am (MODULES): Add new files.
* doc/guix.texi (Build Systems): Document the go-build-system.
 2017-10-12 21:22:40 -04:00
Ricardo Wurmus
b3936f35ae
gnu: clustal-omega: Update to 1.2.4. 
* gnu/packages/bioinformatics.scm (clustal-omega): Update to 1.2.4.
 2017-10-12 23:54:54 +02:00
Ludovic Courtès
e2491f2bd4
gnu: Add trailing slash to 'search.cpan.org' home pages. 
* gnu/packages/perl.scm: Add trailing slash to 'search.cpan.org' home
pages.
 2017-10-12 23:47:48 +02:00
Ludovic Courtès
9f9c36f5c4
gnu: Update home page URLs for Xorg packages. 
* gnu/packages/xorg.scm (imake, lndir, libxshmfence)
(xorg-rgb, xinit, xterm): Update 'home-page' following redirects.
 2017-10-12 23:47:48 +02:00
Ludovic Courtès
61f28fe7e9
lint: 'home-page' checker reports permanent redirects. 
* guix/scripts/lint.scm (probe-uri): Add special case for HTTP 301.
(validate-uri): Likewise.
* tests/lint.scm ("home-page: 301, invalid")
("home-page: 301 -> 200", "home-page: 301 -> 404")
("source: 301 -> 200", "source: 301 -> 404"): New tests.
 2017-10-12 23:47:48 +02:00
Ludovic Courtès
6ea10db973
tests: Support multiple HTTP server instances. 
* guix/tests/http.scm (%http-server-socket): Turn into...
(open-http-server-socket): ... this procedure.
(http-server-can-listen?): New procedure.
(http-write, %http-server-lock, %http-server-ready)
(http-open, stub-http-server): Move to 'call-with-http-server' body.
(call-with-http-server): Add #:headers parameter.
(with-http-server): Add an additional pattern with headers.
* tests/derivations.scm: Use (http-server-can-listen?) instead
of (force %http-server-socket).
* tests/lint.scm: Likewise.
 2017-10-12 23:47:48 +02:00
Efraim Flashner
e37415917c
gnu: python-psycopg2: Update to 2.7.3.1. 
* gnu/packages/python.scm (python-psycopg2): Update to 2.7.3.1.
[inputs]: Replace postgresql@9.6 with postgresql.
 2017-10-13 00:00:42 +03:00
Efraim Flashner
4e169fc67a
gnu: python-psycopg2: Use postgresql@9.6. 
* gnu/packages/python.scm (python-psycopg2)[inputs]: Replace postgresql
with postgresql@9.6.
 2017-10-12 23:39:36 +03:00
Efraim Flashner
7658d89bb7
gnu: Add postgresql@9.6. 
* gnu/packages/databases.scm (postgresql@9.6): New variable.
 2017-10-12 23:39:35 +03:00
Christopher Baines
ee8aab1f8d
gnu: Add python-jupyter-console as input to python-ipython. 
This fixes running ipython console and ipython3 console, as the
jupyter_console package is missing.

As python-ipython is an input to python-jupyter-console, use a modified
version of the package which doesn't have this input.

* gnu/packages/python.scm (python-jupyter-console-minimal): New variable.
  (python-ipython)[propagated-inputs]: Replace python-jupyter-console with
  python-jupyter-console-minimal.
 2017-10-12 20:23:25 +01:00
Marius Bakke
db314bf44e
gnu: wireshark: Minor package improvements. 
* gnu/packages/networking.scm (wireshark)[inputs]: Move QTTOOLS ...
[native-inputs]: ... here.
[home-page]: Remove duplicate.
 2017-10-12 20:32:09 +02:00
Marius Bakke
453361b374
gnu: wireshark: Update to 2.4.2. 
* gnu/packages/networking.scm (wireshark): Update to 2.4.2.
 2017-10-12 20:25:38 +02:00
Marius Bakke
24384c39ad
gnu: xorg-server: Update to 1.19.5. [security fixes] 
Fixes CVE-2017-{12176..12187}.  See
<https://lists.x.org/archives/xorg-announce/2017-October/002814.html>

* gnu/packages/xorg.scm (xorg-server): Update to 1.19.5.
 2017-10-12 20:02:39 +02:00
Marius Bakke
fc0ed8c9c9
Revert "gnu: xorg-server: Make the test-variant visible." 
Hiding/unhiding changes the derivation and thus this caused too many rebuilds
for 'master'.

This reverts commit 8cf892e6cd.
 2017-10-12 19:35:53 +02:00
Marius Bakke
0bf6212338
gnu: libextractor: Update to 1.5. 
* gnu/packages/gnunet.scm (libextractor): Update to 1.5.
 2017-10-12 19:24:59 +02:00
Marius Bakke
d636fd99c3
gnu: ccid: Update to 1.4.28. 
* gnu/packages/security-token.scm (ccid): Update to 1.4.28.
 2017-10-12 19:24:59 +02:00
Marius Bakke
2a087882b1
gnu: mesa: Disable imx driver for armhf-linux. 
* gnu/packages/gl.scm (mesa)<#:configure-flags>: Don't build imx driver.
 2017-10-12 19:24:58 +02:00
Efraim Flashner
5acd59ee12
gnu: qt: Update to 5.9.2. 
* gnu/packages/qt.scm (qt): Update to 5.9.2.
[outputs]: Add 'examples'.
[source]: Update 3rd party code to unbundle.
[inputs]: Add bluez, double-conversion, gstreamer, gst-plugins-base,
jasper, libinput-minimal, libtiff, libwebp, libxext, wayland. Replace
pcre with pcre2.
[arguments]: Re-enable parallel building. Update build flags.
 2017-10-12 20:00:19 +03:00
Ludovic Courtès
aad8a14300
services: cleanup: Remove Shadow lock files from /etc. 
Partly fixes <https://bugs.gnu.org/28772>.
Reported by Oleg Pykhalov <go.wigust@gmail.com>.

* gnu/services.scm (cleanup-gexp): Remove /etc/{passwd,group}.lock and
/etc/.pwd.lock.
 2017-10-12 17:51:41 +02:00
Ludovic Courtès
d8e89b1c79
offload: Reduce the number of calls to 'machine-load'. 
Previously we would call 'machine-load' once per machine, which was very
costly when there were many machines.  Now we arrange to call it only
once on average (when all the machines have the same 'speed' value).

* guix/scripts/offload.scm (random-seed, shuffle): New procedures.
(choose-build-machine)[machines+slots+loads]: Rename to...
[machines+slots]: ... this.  Remove load from the tuples therein.
[undecorate]: Adjust accordingly.
[machine-less-loaded-or-faster?]: Remove.
[machine-faster?]: New procedure.
Sort MACHINES+SLOTS according to 'machine-faster?'.  Call
'machine-load?' as the last thing.
 2017-10-12 17:51:41 +02:00
宋文武
abaee53c80
substitute: Close the progress port after substitute finished. 
Fixes <https://bugs.gnu.org/28756>.

* guix/scripts/substitute.scm (progress-substitution):
Call '(close-port progress)'.
 2017-10-12 22:31:22 +08:00
Ricardo Wurmus
c6643f2d52
gnu: f-seq: Truncate version string. 
* gnu/packages/bioinformatics.scm (f-seq)[version]: Truncate commit part of
the version string.
 2017-10-12 08:43:54 +02:00
Ludovic Courtès
7ad81b8b67
gnu: totem: Update to 3.26.0. 
* gnu/packages/gnome.scm (totem): Update to 3.26.0.
[source]: Add 'patches' field.
[build-system]: Switch to MESON-BUILD-SYSTEM.
[native-inputs]: Add GTK+:bin and GLIB:bin.
[arguments]: Pass #:glib-or-gtk?.  Adjust #:configure-flags to new
syntax.
* gnu/packages/patches/totem-meson-easy-codec.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
 2017-10-11 23:00:46 +02:00
Ludovic Courtès
b27ce4164a
services: gnome: Register more polkit actions. 
This should allow more operations such as changing the system date and
time via the Control Center (reported at
<https://lists.gnu.org/archive/html/help-guix/2016-09/msg00059.html>),
performing "file operations" via gvfs, and interacting with processes
using the System Monitor.

* gnu/services/desktop.scm (gnome-polkit-settings): New procedure.
(gnome-desktop-service-type): Use it in POLKIT-SERVICE-TYPE extension.
 2017-10-11 23:00:46 +02:00
Tobias Geerinckx-Rice
22345a8ed7
gnu: mobile-broadband-provider-info: Update to 20170310. 
* gnu/packages/gnome.scm (mobile-broadband-provider-info): Update to 20170310.
 2017-10-11 21:53:37 +02:00
Tobias Geerinckx-Rice
be84a1231e
gnu: dovecot: Update to 2.2.33.1. 
* gnu/packages/mail.scm (dovecot): Update to 2.2.33.1.
 2017-10-11 21:53:36 +02:00
Tobias Geerinckx-Rice
3bf42e22b3
gnu: gparted: Update to 0.30.0. 
* gnu/packages/disk.scm (gparted): Update to 0.30.0.
 2017-10-11 21:53:36 +02:00
Tobias Geerinckx-Rice
f9bd6b3aef
gnu: evince: Update to 3.26.0. 
* gnu/packages/gnome.scm (evince): Update to 3.26.0.
 2017-10-11 21:53:36 +02:00
Tobias Geerinckx-Rice
f51ea1cd61
gnu: orca: Update to 3.26.0. 
gnu/packages/gnome.scm (orca): Update to 3.26.0.
 2017-10-11 21:53:35 +02:00
Thomas Danckaert
de47cfed13
gnu: bluez: Disable unpredictable test on armhf. 
* gnu/packages/linux.scm (bluez): [arguments] Add phase to skip a test instead
of marking it as XFAIL.
 2017-10-11 21:44:06 +02:00
Ricardo Wurmus
01d87d3c18
gnu: rcas-web: Update to 0.0.4. 
* gnu/packages/bioinformatics.scm (rcas-web): Update to 0.0.4.
 2017-10-11 21:37:37 +02:00
Ludovic Courtès
85a2b58987
zlib: Fix memory leak due to revealed ports not being GC'd. 
Fixes <https://bugs.gnu.org/28784>.

This mostly reverts 81a0f1cdf1, which
introduced a regression: revealed ports are *never* GC'd (contrary to
what Guile's manual suggests).

In addition to the revert, 'close-procedure' now explicitly swallows
EBADF errors when 'close-port' is called.

* guix/zlib.scm (close-procedure): New procedure.
(make-gzip-input-port)[gzfile]: Use 'fileno' instead of 'port->fdes'.
Use 'close-procedure' instead of 'gzclose'.
(make-gzip-output-port): Likewise.
* tests/zlib.scm ("compression/decompression pipe"): Use 'port-closed?'
to determine whether PARENT has been closed.
 2017-10-11 15:20:50 +02:00
Leo Famulari
5781c7dd27
gnu: mpg123: Update to 1.25.7. 
* gnu/packages/mp3.scm (mpg123): Update to 1.25.7.
 2017-10-11 08:24:13 -04:00
Ludovic Courtès
50fcf37c13
doc: Give an example with a FAT UUID. 
* gnu/system/examples/lightweight-desktop.tmpl <file-systems>: Add a
UUID for the /boot/efi partition.
* doc/guix.texi (Using the Configuration System): Mention it.
 2017-10-11 11:12:33 +02:00
Ludovic Courtès
03f66aea63
uuid: Change "fat32" to "fat". 
* gnu/system/uuid.scm (%fat32-endianness): Rename to...
(%fat-endianness): ... this.
(fat32-uuid->string): Rename to...
(fat-uuid->string): ... this.
(%fat32-uuid-rx): Rename to..
(%fat-uuid-rx): ... this.
(string->fat32-uuid): Rename to...
(string->fat-uuid): ... this.
(%uuid-parsers, %uuid-printers): Add 'fat16.
 2017-10-11 11:12:33 +02:00
Ludovic Courtès
88235675fc
file-systems: Add support for FAT16. 
* gnu/build/file-systems.scm (check-fat32-file-system): Rename to...
(check-fat-file-system): ... this.
(check-file-system): Adjust accordingly.
(fat16-superblock?, read-fat16-superblock)
(fat16-superblock-uuid, fat16-superblock-volume-name): New procedures.
(%partition-label-readers, %partition-uuid-readers): Add FAT16.
 2017-10-11 11:12:33 +02:00
Ludovic Courtès
9976c76aab
file-systems: Preserve UUID types when serializing. 
Reported by Roel Janssen <roel@gnu.org>
at <https://lists.gnu.org/archive/html/help-guix/2017-09/msg00094.html>.

* gnu/system/file-systems.scm (file-system->spec): When DEVICE is a
UUID, serialize it in a way that preserves its type.
(spec->file-system): Adjust accordingly.
* gnu/build/file-systems.scm (canonicalize-device-spec): Add case for
when SPEC is 'uuid?'.
 2017-10-11 11:12:33 +02:00
Ludovic Courtès
1c65cca574
file-systems: 'mount-file-system' now takes a <file-system> object. 
* gnu/build/file-systems.scm (mount-file-system): Rename 'spec' to 'fs'
and assume it's a <file-system>.
* gnu/build/linux-boot.scm (boot-system): Assume MOUNTS is a list of
<file-system> and adjust accordingly.
* gnu/build/linux-container.scm (mount-file-systems): Remove
'file-system->spec' call.
* gnu/services/base.scm (file-system-shepherd-service): Add
'spec->file-system' call.  Add (gnu system file-systems) to 'modules'.
* gnu/system/linux-initrd.scm (raw-initrd): Use (gnu system
file-systems).  Add 'spec->file-system' call for #:mounts.
 2017-10-11 11:12:33 +02:00
Theodoros Foradis
f26af33aec
gnu: Add freehdl. 
* gnu/packages/engineering.scm (freehdl): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-10-11 11:12:33 +02:00
Theodoros Foradis
91cabd3e58
gnu: Add xyce-parallel. 
* gnu/packages/engineering.scm (trilinos-parallel-xyce)
(xyce-parallel): New variables.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-10-11 11:12:33 +02:00
Theodoros Foradis
1da02b6a49
gnu: Add xyce-serial. 
* gnu/packages/engineering.scm (trilinos-serial-xyce)
(xyce-serial): New variables.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-10-11 11:12:33 +02:00
Theodoros Foradis
b509efb385
gnu: Add lapack-3.5. 
* gnu/packages/maths.scm (lapack-3.5): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-10-11 11:12:33 +02:00
Ricardo Wurmus
22d1060eff
gnu: python-rpy2: Ignore test results. 
* gnu/packages/python.scm (python-rpy2)[arguments]: Ignore test failures.
 2017-10-11 11:06:05 +02:00
Roel Janssen
6de897ac5a
gnu: Add r-ggdendro. 
* gnu/packages/statistics.scm (r-ggdendro): New variable.
 2017-10-11 10:02:08 +02:00