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Author SHA1 Message Date
Ludovic Courtès
ce0614ddb0 gnu: Move 'which' to (gnu packages base). 
* gnu/packages/which.scm: Remove.
* gnu-system.am (GNU_SYSTEM_MODULES): Remove it.
* gnu/packages/base.scm (which): New variable.
* gnu/packages/aspell.scm, gnu/packages/audio.scm,
  gnu/packages/autogen.scm, gnu/packages/cdrom.scm,
  gnu/packages/compression.scm, gnu/packages/datamash.scm,
  gnu/packages/games.scm, gnu/packages/glib.scm,
  gnu/packages/gnu-pw-mgr.scm, gnu/packages/gnutls.scm,
  gnu/packages/gps.scm, gnu/packages/guile.scm,
  gnu/packages/java.scm, gnu/packages/libevent.scm,
  gnu/packages/linux.scm, gnu/packages/lisp.scm,
  gnu/packages/node.scm, gnu/packages/ntp.scm,
  gnu/packages/orpheus.scm, gnu/packages/pciutils.scm,
  gnu/packages/python.scm, gnu/packages/qt.scm,
  gnu/packages/rsync.scm, gnu/packages/sawfish.scm,
  gnu/packages/scheme.scm, gnu/packages/ssh.scm,
  gnu/packages/statistics.scm, gnu/packages/texlive.scm,
  gnu/packages/wdiff.scm: Adjust accordingly.
 2015-03-04 17:23:27 +01:00
Ludovic Courtès
f61e0e7900 gnu: Avoid #:prefix when importing a (gnu packages …) module. 
* gnu/packages/admin.scm, gnu/packages/emacs.scm,
  gnu/packages/gnutls.scm, gnu/packages/gsasl.scm,
  gnu/packages/linux.scm: Remove uses of #:prefix for package modules.
 2015-03-04 17:23:27 +01:00
Ricardo Wurmus
0e309f1e5b gnu: icedtea6: split outputs. 
* gnu/packages/java.scm (icedtea6)[outputs]: Use separate outputs for
  documentation ("doc"), JDK ("jdk"), and JRE ("out").
* gnu/packages/java.scm (ant)[native-inputs]: Reference "jdk" output of
  icedtea6 package.
* gnu/packages/statistics.scm (r)[inputs]: Reference "jdk" output of icedtea6
  package.
 2015-03-04 15:59:41 +01:00
Ludovic Courtès
1289062522 Merge branch 'core-updates'. 2015-03-04 14:07:23 +01:00
Ricardo Wurmus
cb4d3d863b gnu: python2-pygtk: fix path to pygobject-codegen-2.0 
* gnu/packages/gtk.scm (python2-pygtk)[arguments]: Add phase to patch the path
  to the pygobject-codegen-2.0 executable.
 2015-03-04 13:30:39 +01:00
宋文武
32158110b0 gnu: octave: Update to 3.8.2. 
* gnu/packages/maths.scm (octave): Update to 3.8.2.
 2015-03-04 16:45:23 +08:00
Tomáš Čech
27ce97c64e gnu: enlightenment: Add missing, but used module. 
* gnu/packages/enlightenment.scm: Add missing, but used module.
 2015-03-04 09:36:49 +01:00
Tomáš Čech
ea28d935f3 gnu: rename module and add missing dependency 
* gnu/packages/enlightenment.scm: Change module name to be consistent.
* gnu/packages/enlightenment.scm: Add missing, but used module.
 2015-03-04 08:50:39 +01:00
宋文武
5713809335 gnu: xterm: Update to 315. 
* gnu/packages/xorg.scm (xterm): Update to 315.
 2015-03-04 13:30:51 +08:00
宋文武
081cbed90e gnu: flac: Update to 1.3.1. 
* gnu/packages/xiph.scm (flac): Update to 1.3.1.
 2015-03-04 13:19:24 +08:00
宋文武
d529b91b4e gnu: flac: Propagate libogg. 
* gnu/packages/xiph.scm (flac): Move libogg to 'propagated-inputs'.
 2015-03-04 13:06:32 +08:00
宋文武
221d45726c gnu: gtk-xfce-engine: Update to 2.10.1. 
* gnu/packages/xfce.scm (gtk-xfce-engine): Update to 2.10.1.
 2015-03-04 10:16:43 +08:00
Ludovic Courtès
928d62f225 gnu: Add bash-completion. 
* gnu/packages/bash.scm (bash-completion): New variable.
 2015-03-03 22:58:46 +01:00
Ludovic Courtès
23c0e74375 gnu: git: Install the Bash completion script. 
* gnu/packages/version-control.scm (git)[arguments]: Add
  'install-shell-completion' phase.
 2015-03-03 22:58:45 +01:00
Ludovic Courtès
da699774d4 gnu: Add search path specifications for 'SSL_CERT_FILE' and 'GIT_SSL_CAINFO'. 
* gnu/packages/openssl.scm (openssl)[native-search-paths]: Add
  specification for 'SSL_CERT_FILE'.
* gnu/packages/version-control.scm (git)[native-search-paths]: Add
  specification for 'GIT_SSL_CAINFO'.
 2015-03-03 21:25:39 +01:00
Mark H Weaver
41ce460133 gnu: nss-certs: Install only trusted CA certificates. 
* gnu/packages/certs.scm (nss-certs): Only install certificates that include a
  non-empty "openssl-trust=" annotation.
 2015-03-03 13:49:12 -05:00
Ludovic Courtès
00e650981c gnu: Add rdesktop. 
* gnu/packages/rdesktop.scm: New file.
* gnu-system.am (GNU_SYSTEM_MODULES): Add it.
 2015-03-03 18:45:10 +01:00
Jason Self
ad036bda89 gnu: vlc: Update to 2.2.0 
* gnu/packages/video.scm (vlc): Update to version 2.2.0.
 2015-03-03 05:31:59 -08:00
Jason Self
32d9109f24 gnu: libvorbis: Update to 1.3.5 
* gnu/packages/xiph.scm (libvorbis): Update to version 1.3.5.
 2015-03-03 05:15:54 -08:00
Tomáš Čech
df2b053af8 gnu: Add terminology. 
* gnu/packages/enlightenment.scm (terminology): New variable.
 2015-03-03 13:04:37 +01:00
Tomáš Čech
cfa0468317 gnu: Add emotion-generic-players 
* gnu/packages/enlightenment.scm (emotion-generic-players): New variable.
 2015-03-03 13:04:37 +01:00
Tomáš Čech
87a37fdf72 gnu: Add evas-generic-loaders 
* gnu/packages/enlightenment.scm (evas-generic-loaders): New variable.
 2015-03-03 13:04:37 +01:00
Tomáš Čech
146ee5cd28 gnu: Add elementary. 
* gnu/packages/enlightenment.scm (elementary): New variable.
 2015-03-03 13:04:37 +01:00
Tomáš Čech
538fb23ea0 gnu: Add efl. 
* gnu/packages/enlightenment.scm: New file
* gnu/packages/enlightenment.scm (efl): New variable.
* gnu-system.am (GNU_SYSTEM_MODULES): Add it.
 2015-03-03 13:04:37 +01:00
Ricardo Wurmus
92cb152b37 gnu: Add snakemake. 
* gnu/packages/python.scm (snakemake): New variable.
 2015-03-03 10:22:23 +01:00
Mark H Weaver
bbd0ea77ef gnu: libuv: Update to 1.4.2. 
* gnu/packages/libevent.scm (libuv): Update to 1.4.2.  Update source URI.
  Add 'file-name' field to origin.  Move 'autogen' phase after 'unpack'.
  Run "sh autogen.sh" instead of "./autogen.sh".
 2015-03-02 20:35:32 -05:00
Mark H Weaver
2ecebec142 gnu: skribilo: Adapt to recently renamed 'guile-reader' variable. 
This is a followup to commit d6d9f1f715.

* gnu/packages/skribilo.scm (skribilo)[propagated-inputs]: Change
  'guile-reader/guile-2.0' --> 'guile-reader'.
 2015-03-02 19:53:42 -05:00
Paul van der Walt
136770c9c7 gnu: Add girara. 
* gnu/packages/gtk.scm (girara): Add variable.
 2015-03-02 23:37:36 +01:00
Paul van der Walt
4ac696c68b gnu: check: Update version to 0.9.14 
* gnu/packages/check.scm (check): Update to version 0.9.14.
 2015-03-02 23:37:35 +01:00
Paul van der Walt
58acabc368 gnu: mpd: Update to 0.19.9. 
* gnu/packages/mpd.scm (mpd): Update version to 0.19.9. Add boost and
  icu4c.
 2015-03-02 23:37:35 +01:00
David Thompson
bda0c1392a gnu: Add ruby-hoe. 
* gnu/packages/ruby.scm (ruby-hoe): New variable.
 2015-03-02 17:33:53 -05:00
David Thompson
927ff2c379 gnu: Add mpdscribble. 
* gnu/packages/mpd.scm (mpdscribble): New variable.
 2015-03-02 17:31:40 -05:00
Ludovic Courtès
e343024dc4 gnu: tcsh: Use ISO-8859-1 when patching "tests/testsuite". 
* gnu/packages/tcsh.scm (tcsh)[arguments]: Set %DEFAULT-PORT-ENCODING
  before substituting "tests/testsuite".  Fixes build failure at
  <http://hydra.gnu.org/build/266962/nixlog/1/raw>.
 2015-03-02 23:18:27 +01:00
Ludovic Courtès
d6d9f1f715 gnu: Remove 'guile-reader-for-guile_1.8'. 
This was a useful example back in July 2012, but not very useful
beyond that.

* gnu/packages/guile.scm (guile-reader): Turn into a plain package.
  [source]: Use mirror:// URI.
  [inputs]: Use GUILE-2.0.
  [arguments]: Use the site/2.0 directory for --with-moduledir.
  (guile-reader/guile-1.8, guile-reader/guile-2.0): Remove.
 2015-03-02 21:40:53 +01:00
Mark H Weaver
1204c5100e gnu: Add llvm-3.6.0 and clang-3.6.0. 
* gnu/packages/llvm.scm (llvm): Update to 3.6.0.
  (clang-from-llvm): New procedure.
  (clang): Update to 3.6.0.  Reimplement using 'clang-from-llvm'.
  (llvm-3.5, clang-3.5): New variables.
 2015-03-02 12:08:56 -05:00
Ricardo Wurmus
191c710139 gnu: Add crossmap. 
* gnu/packages/bioinformatics.scm (crossmap): New variable.
* gnu/packages/patches/crossmap-allow-system-pysam.patch: New file.
* gnu-system.am (dist_patch_DATA): Add it.
 2015-03-02 17:23:56 +01:00
宋文武
1385d37a6e gnu: gtk-xfce-engine: Update to 2.10.0. 
* gnu/packages/xfce.scm (gtk-xfce-engine): Update to 2.10.0.
 2015-03-02 21:27:42 +08:00
Ricardo Wurmus
810cff8557 gnu: Add CLIPper. 
* gnu/packages/bioinformatics.scm (clipper): New variable.
 2015-03-02 14:11:54 +01:00
Ricardo Wurmus
240ca4aae7 gnu: Add Scikit-learn. 
* gnu/packages/python.scm (python-scikit-learn, python2-scikit-learn): New
  variables.
 2015-03-02 14:09:10 +01:00
宋文武
b283679951 gnu: xfconf: Re-enable tests. 
* gnu/packages/xfce.scm (xfconf)[arguments]: Add #:phases.
 2015-03-02 20:37:21 +08:00
Ricardo Wurmus
d57e6d0f8e gnu: Add MACS. 
* gnu/packages/bioinformatics.scm (macs): New variable.
 2015-03-02 11:33:13 +01:00
Ricardo Wurmus
a2fb1492af gnu: Add pybedtools. 
* gnu/packages/bioinformatics.scm (python2-pybedtools): New variable.
 2015-03-02 11:32:10 +01:00
Ricardo Wurmus
8d12be1eb1 gnu: Add pyyaml. 
* gnu/packages/python.scm (python-pyyaml, python2-pyyaml): New variables.
 2015-03-02 11:31:14 +01:00
Mark H Weaver
649b5e1bd4 gnu: libotr: Update to 4.1.0. 
* gnu/packages/messaging.scm (libotr): Update to 4.1.0.
 2015-03-02 00:09:09 -05:00
Mark H Weaver
e013220eb6 gnu: xfconf: Update to 4.12.0. 
* gnu/packages/xfce.scm (xfconf): Update to 4.12.0.  Disable tests.
 2015-03-01 20:16:45 -05:00
Mark H Weaver
f6176e7870 gnu: gnu-pw-mgr: Update to 1.3. 
* gnu/packages/gnu-pw-mgr.scm (gnu-pw-mgr): Update to 1.3.
 2015-03-01 19:44:13 -05:00
Mark H Weaver
0a5c308782 gnu: sharutils: Update to 4.15. 
* gnu/packages/compression.scm (sharutils): Update to 4.15.
 2015-03-01 19:42:57 -05:00
Mark H Weaver
5245251eaa gnu: gdb: Update to 7.9. 
* gnu/packages/gdb.scm (gdb): Update to 7.9.
 2015-03-01 19:35:46 -05:00
Mark H Weaver
3820d39739 Merge branch 'master' into core-updates 
Conflicts:
	gnu/packages/gnupg.scm
 2015-03-01 19:05:29 -05:00
Mark H Weaver
afff9058a0 gnu: gnupg: Update to 2.0.27. 
* gnu/packages/gnupg.scm (gnupg): Update to 2.0.27.
 2015-03-01 19:02:49 -05:00