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Author SHA1 Message Date
Ricardo Wurmus
3411f8d512
gnu: Add r-fmcsr. 
* gnu/packages/bioconductor.scm (r-fmcsr): New variable.
 2021-11-30 22:48:07 +01:00
Ricardo Wurmus
e4e50229f1
gnu: python-cloudscraper: Update to 1.2.58. 
* gnu/packages/python-web.scm (python-cloudscraper): Update to 1.2.58.
[source]: Do not delete as many files in snippet; fetch sources via git.
[arguments]: Add build phase 'fix-references; replace 'check phase.
[inputs]: Add node.
[propagated-inputs]: Add python-js2py, python-polling2, and python-responses.
 2021-11-30 20:49:18 +01:00
Ricardo Wurmus
3b74b41498
gnu: Add python-polling2. 
* gnu/packages/python-xyz.scm (python-polling2): New variable.
 2021-11-30 20:49:10 +01:00
Ricardo Wurmus
1a13968210
gnu: Add python-js2py. 
* gnu/packages/python-web.scm (python-js2py): New variable.
 2021-11-30 20:48:34 +01:00
Ricardo Wurmus
e35cfeb253
gnu: Add python-pyjsparser. 
* gnu/packages/python-web.scm (python-pyjsparser): New variable.
 2021-11-30 20:48:22 +01:00
Ricardo Wurmus
53a16a2143
gnu: Add r-seuratdata. 
* gnu/packages/cran.scm (r-seuratdata): New variable.
 2021-11-30 20:30:02 +01:00
Ricardo Wurmus
79bc812357
gnu: guile-wisp: Update to 1.0.6. 
* gnu/packages/guile-xyz.scm (guile-wisp): Update to 1.0.6.
 2021-11-30 20:30:02 +01:00
Ricardo Wurmus
f7db3bf277
gnu: guile-wisp: Remove trailing #T. 
* gnu/packages/guile-xyz.scm (guile-wisp)[arguments]: Remove trailing #T.
 2021-11-30 20:30:02 +01:00
Nicolas Goaziou
a47dfd0e7f
gnu: emacs-fountain-mode: Update to 3.6.0. 
* gnu/packages/emacs-xyz.scm (emacs-fountain-mode): Update to 3.6.0.
 2021-11-30 19:59:57 +01:00
Nicolas Goaziou
2ac171867a
gnu: emacs-tramp: Update to 2.5.1.5. 
* gnu/packages/emacs-xyz.scm (emacs-tramp): Update to 2.5.1.5.
 2021-11-30 19:56:16 +01:00
Hong.Li@mdc-berlin.de
5bdf1b6551
gnu: Add r-rbokeh. 
* gnu/packages/cran.scm (r-rbokeh): New variable.

Co-authored-by: Ricardo Wurmus <rekado@elephly.net>
 2021-11-30 16:46:18 +01:00
Hong.Li@mdc-berlin.de
21bf500ee9
gnu: Add r-gistr. 
* gnu/packages/cran.scm (r-gistr): New variable.
 2021-11-30 16:46:18 +01:00
Hong Li
78f2fe7da8
gnu: r-crul: Update to 1.2.0. 
* gnu/packages/cran.scm (r-crul): Update to 1.2.0.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2021-11-30 16:46:17 +01:00
Ricardo Wurmus
16d7f26fed
gnu: Add python-woob. 
* gnu/packages/python-web.scm (python-woob): New variable.
 2021-11-30 16:46:17 +01:00
Ricardo Wurmus
bfaf7b559e
gnu: Add python-xunitparser. 
* gnu/packages/python-check.scm (python-xunitparser): New variable.
 2021-11-30 16:46:17 +01:00
Ricardo Wurmus
173a2998d9
gnu: r-umi4cpackage: Embed references to perl and bowtie2. 
* gnu/packages/bioinformatics.scm (r-umi4cpackage)[arguments]: Add build
phases to patch calls of bowtie2 and perl.
[inputs]: Add perl and bowtie.
[synopsis]: Remove trailing period.
 2021-11-30 16:46:17 +01:00
Julien Lepiller
d95a982cdd
gnu: coq: Update to 8.14.0. 
* gnu/packages/coq.scm (coq): Update to 8.14.0.
(coq-bignums): Update to 8.14.0.
(coq-equations): Update to 1.3.
* gnu/packages/patches/coq-fix-envvars.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
 2021-11-30 03:52:00 +01:00
Julien Lepiller
189501bf3b
gnu: proof-general: Update to latest commit. 
* gnu/packages/coq.scm (proof-general): Update to latest commit.
[license]: Change to glp3+.
 2021-11-30 03:19:33 +01:00
Julien Lepiller
bcd4c7ae6a
gnu: coq-semantics: Update to 8.14.0. 
* gnu/packages/coq.scm (coq-semantics): Update to 8.14.0.
 2021-11-30 03:19:21 +01:00
Tobias Geerinckx-Rice
892f1b7273
services: Accept <inferior-package>s in lieu of <package>s. 
* gnu/services/authentication.scm (fprintd-configuration)
(nslcd-configuration): Substitute file-like objects for package ones.
* gnu/services/cgit.scm (cgit-configuration, opaque-cgit-configuration):
Likewise.
* gnu/services/cups.scm (package-list?, cups-configuration): Likewise.
* gnu/services/dns.scm (verify-knot-configuration)
(ddclient-configuration): Likewise.
* gnu/services/docker.scm (docker-configuration): Likewise.
* gnu/services/file-sharing.scm (transmission-daemon-configuration): Likewise.
* gnu/services/getmail.scm (getmail-configuration): Likewise.
* gnu/services/mail.scm (dovecot-configuration)
(opaque-dovecot-configuration): Likewise.
* gnu/services/messaging.scm (prosody-configuration)
(opaque-prosody-configuration): Likewise.
* gnu/services/monitoring.scm (zabbix-server-configuration)
(zabbix-agent-configuration): Likewise.
* gnu/services/networking.scm (opendht-configuration): Likewise.
* gnu/services/pm.scm (tlp-configuration): Likewise.
* gnu/services/telephony.scm (jami-configuration): Likewise.
* gnu/services/virtualization.scm (libvirt-configuration)
(qemu-guest-agent-configuration): Likewise.
* gnu/services/vpn.scm (openvpn-client-configuration): Likewise.
 2021-11-30 01:08:55 +01:00
Tobias Geerinckx-Rice
dc9be12eaf
gnu: squashfs-tools: Update to 4.5. 
* gnu/packages/compression.scm (squashfs-tools): Update to 4.5.
 2021-11-30 01:08:55 +01:00
Tobias Geerinckx-Rice
cdf7b3daa3
gnu: toybox: Update to 0.8.5. 
* gnu/packages/busybox.scm (toybox): Update to 0.8.5.
[arguments]: Add a new 'fix-or-skip-broken-tests phase.
Don't explicitly return #t from the other phases.
 2021-11-30 01:08:55 +01:00
Tobias Geerinckx-Rice
a392ad8302
gnu: indi: Update to 1.9.3. 
* gnu/packages/astronomy.scm (indi): Update to 1.9.3.
 2021-11-30 01:08:55 +01:00
Tobias Geerinckx-Rice
4c62406371
gnu: simdjson: Update to 1.0.2. 
* gnu/packages/cpp.scm (simdjson): Update to 1.0.2.
 2021-11-30 01:08:54 +01:00
Tobias Geerinckx-Rice
c6a15cf756
gnu: diffoscope: Update to 194. 
* gnu/packages/diffoscope.scm (diffoscope): Update to 194.
 2021-11-30 01:08:54 +01:00
Tobias Geerinckx-Rice
588698c92b
gnu: lttoolbox: Omit static libraries. 
* gnu/packages/dictionaries.scm (lttoolbox)[arguments]:
Add "--disable-static" to #:configure-flags.
 2021-11-30 01:08:54 +01:00
Tobias Geerinckx-Rice
d51c5d032e
gnu: lttoolbox: Update to 3.5.4. 
* gnu/packages/dictionaries.scm (lttoolbox): Update to 3.5.4.
 2021-11-30 01:08:54 +01:00
Tobias Geerinckx-Rice
795e8c7a7c
gnu: quazip@1: Update to 1.2. 
* gnu/packages/compression.scm (quazip): Update to 1.2.
 2021-11-30 01:08:54 +01:00
Tobias Geerinckx-Rice
26787a7034
gnu: thefuck: Update to 3.31. 
* gnu/packages/admin.scm (thefuck): Update to 3.31.
[arguments]: Don't call buggy settings.init() during test suite.
 2021-11-30 01:08:54 +01:00
Tobias Geerinckx-Rice
3848dafeb1
gnu: xa: Update to 2.3.12. 
* gnu/packages/assembly.scm (xa): Update to 2.3.12.
 2021-11-30 01:08:53 +01:00
Tobias Geerinckx-Rice
39631cefa8
gnu: rxvt-unicode: Update to 9.30. 
* gnu/packages/xdisorg.scm (rxvt-unicode): Update to 9.30.
 2021-11-30 01:08:53 +01:00
Tobias Geerinckx-Rice
eb62e3e54d
gnu: ethtool: Update to 5.15. 
* gnu/packages/networking.scm (ethtool): Update to 5.15.
 2021-11-30 01:08:53 +01:00
Tobias Geerinckx-Rice
01f08d5f82
gnu: btrfs-progs: Update to 5.15.1. 
* gnu/packages/linux.scm (btrfs-progs): Update to 5.15.1.
 2021-11-30 01:08:53 +01:00
Tobias Geerinckx-Rice
1e9d70e42e
gnu: powerstat: Update to 0.02.27. 
* gnu/packages/linux.scm (powerstat): Update to 0.02.27.
 2021-11-30 01:08:53 +01:00
Tobias Geerinckx-Rice
c1546d8a68
gnu: powerstat: Fetch sources from Git. 
* gnu/packages/linux.scm (powerstat)[source]: Use GIT-FETCH and
GIT-FILE-NAME.
 2021-11-30 01:08:53 +01:00
Tobias Geerinckx-Rice
2397cc097c
gnu: usbutils: Update to 014. 
* gnu/packages/linux.scm (usbutils): Update to 014.
[arguments]: Remove obsolete autogen.sh substitution.
Don't explicitly return #t from phases.
 2021-11-30 01:08:53 +01:00
Tobias Geerinckx-Rice
215524a116
gnu: xfsprogs: Omit static library. 
* gnu/packages/linux.scm (xfsprogs)[arguments]:
Add "--disable-static" to #:configure-flags.
(xfsprogs-static)[arguments]: Undo it.
 2021-11-30 01:08:52 +01:00
Tobias Geerinckx-Rice
3ec27a7436
gnu: xfsprogs: Update to 5.14.0. 
* gnu/packages/linux.scm (xfsprogs): Update to 5.14.0.
[inputs]: Add liburcu.
 2021-11-30 01:08:52 +01:00
Tobias Geerinckx-Rice
72c3763653
gnu: kexec-tools: Update to 2.0.23. 
* gnu/packages/linux.scm (kexec-tools): Update to 2.0.23.
 2021-11-30 01:08:52 +01:00
Petr Hodina
7e3151c19e
gnu: Add inkbox. 
* gnu/packages/qt.scm (inkbox): New variable.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
 2021-11-29 22:18:30 +01:00
Christopher Baines
daa6c67fb4
gnu: guix-build-coordinator: Update to 0-40.226ec0f. 
* gnu/packages/package-management.scm (guix-build-coordinator): Update to
0-40.226ec0f.
* doc/guix.texi (Guix Build Coordinator): Remove note about the service being
considered experimental, it's been stable for a while now.
 2021-11-29 21:01:26 +00:00
jgart
653bcab96d
gnu: Add python-pysox. 
* gnu/packages/audio.scm (python-pysox): New variable.

Signed-off-by: Arun Isaac <arunisaac@systemreboot.net>
 2021-11-29 21:34:24 +05:30
Artyom V. Poptsov
4883d7fe9e
gnu: guile-gitlab: Update to 0.2.1. 
* gnu/packages/guile-xyz.scm (guile-gitlab): Update to 0.2.1.
[inputs]: Use guile2.2-json instead of guile-json-1.

Signed-off-by: Mathieu Othacehe <othacehe@gnu.org>
 2021-11-28 22:35:37 +01:00
Nicolas Goaziou
8351f6c570
gnu: emacs-org: Update to 9.5.1. 
* gnu/packages/emacs-xyz.scm (emacs-org): Update to 9.5.1.
 2021-11-28 22:05:57 +01:00
Morgan Smith
5ee135df5f
gnu: emacs-org: Don't use release tar. 
* gnu/packages/emacs-xyz.scm (emacs-org):
[source]: Use git repository.
[arguments]: Add phases to help with building.
[native-inputs]: Add texinfo.
 2021-11-28 21:54:02 +01:00
Attila Lendvai
b8abc6c88a
gnu: trezord: Update to 2.0.31. 
* gnu/packages/finance.scm (trezord): Update to 2.0.31.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
 2021-11-28 21:31:09 +01:00
Attila Lendvai
d3448fafea
gnu: trezor-agent: Update to 0.11.0. 
* gnu/packages/finance.scm (trezor-agent): Update to 0.11.0.
[source]: Use GitHub repository.
[native-inputs]: Remove python-hidapi.  Add python-attrs.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
 2021-11-28 21:31:09 +01:00
Attila Lendvai
857098830b
gnu: python-trezor: Update to 0.12.3. 
* gnu/packages/finance.scm (python-trezor): Update to 0.12.3.
[source]: Use GitHub repository.
[propagated-inputs]: Add python-attrs.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
 2021-11-28 21:31:08 +01:00
Attila Lendvai
bf90403f42
gnu: python-trezor-agent: Update to 0.14.2. 
* gnu/packages/finance.scm (python-trezor-agent): Update to 0.14.2.
[propagated-inputs]: Add python-pynacl, python-hidapi.  Remove python-ed25519.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
 2021-11-28 21:31:08 +01:00
Attila Lendvai
25cb5bad5e
gnu: python-trezor-agent: Fix key generation with trezor-gpg init 
* gnu/packages/finance.scm (trezor-agent): Add comment on why the
undoing of the wrapping is done, and also delete the irrelevant sideffect of
the now undone wrapping.
(python-trezor-agent): Add a patch that changes the python code to handle the
argv[0] changed by the wrapping.
* gnu/packages/patches/trezor-agent-fix-argv0.patch: New file.
* gnu/local.mk (dist_patch_DATA): Reference patch.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
 2021-11-28 21:31:08 +01:00