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15684 commits

Author SHA1 Message Date
Ricardo Wurmus
dc8ebe43af
gnu: r-biocparallel: Update to 1.8.2. 
* gnu/packages/bioinformatics.scm (r-biocparallel): Update to 1.8.2.
 2017-04-09 13:34:53 +02:00
Ricardo Wurmus
3420ed32d8
gnu: r-jsonlite: Update to 1.4. 
* gnu/packages/web.scm (r-jsonlite): Update to 1.4.
 2017-04-09 13:34:52 +02:00
Mark H Weaver
c8ce351afc
gnu: linux-libre: Update to 4.10.9. 
* gnu/packages/linux.scm (%linux-libre-version): Update to 4.10.9.
(%linux-libre-hash): Update hash.
 2017-04-09 06:01:31 -04:00
Mark H Weaver
0ab8ff138c
gnu: linux-libre@4.9: Update to 4.9.21. 
* gnu/packages/linux.scm (linux-libre-4.9): Update to 4.9.21.
 2017-04-09 06:00:47 -04:00
Mark H Weaver
3ca1c5e2ec
gnu: linux-libre@4.4: Update to 4.4.60. 
* gnu/packages/linux.scm (linux-libre-4.4): Update to 4.4.60.
 2017-04-09 06:00:00 -04:00
Mark H Weaver
482cd367c6
Revert "gnu: Add python-openid." 
This reverts commit ccda568866.
 2017-04-09 03:50:40 -04:00
Eric Bavier
f3cf25c3c2
gnu: torsocks: Patch references to 'getcap' and 'which'. 
* gnu/packages/tor.scm (torsocks)[inputs,arguments]: New fields.
 2017-04-08 22:20:06 -05:00
Efraim Flashner
a3c57693e4
gnu: qjackctl: Build with modular Qt. 
* gnu/packages/audio.scm (qjackctl)[source]: Use sourceforge mirror.
[inputs]: Remove qt, add qtbase, qtx11extras.
 2017-04-09 05:31:39 +03:00
Leo Famulari
dde5831c00
gnu: leafpad: Fix home-page URL. 
* gnu/packages/text-editors.scm (leafpad)[home-page]: Fix URL.
 2017-04-08 21:33:59 -04:00
Feng Shu
0bf11648fc
gnu: Add leafpad. 
* gnu/packages/text-editors.scm (leafpad): New variable.
 2017-04-08 21:30:26 -04:00
Leo Famulari
ea240de4af
screen: Fix info page build failure. 
* gnu/packages/patches/screen-fix-info-syntax-error.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/screen.scm (screen)[source]: Use it.
 2017-04-08 15:53:00 -04:00
Leo Famulari
b496bfea41
gnu: lz4: Update to 1.7.5. 
* gnu/packages/compression.scm (lz4): Update to 1.7.5.
[source]: Update source URL. Use patch 'lz4-fix-test-failures.patch'.
[home-page]: Update URL.
* gnu/packages/patches/lz4-fix-test-failures.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
 2017-04-08 15:36:53 -04:00
ng0
b0eb2af2e6
gnu: Add alpine. 
* gnu/packages/mail.scm (alpine): New variable.

Signed-off-by: Kei Kebreau <kei@openmailbox.org>
 2017-04-08 13:46:58 -04:00
Leo Famulari
f26d6e4e9c
gnu: certbot: Share python-acme's arguments. 
* gnu/packages/tls.scm (certbot)[arguments]: Use substitute-keyword-arguments to
inherit from python-acme.
 2017-04-08 13:24:36 -04:00
Leo Famulari
f0e9fda6be
gnu: certbot, python-acme: Update to 0.13.0. 
* gnu/packages/tls.scm (certbot, python-acme, python2-acme): Update to 0.13.0.
[arguments]: Add 'patch-dependency' phase.
 2017-04-08 13:24:31 -04:00
Kei Kebreau
99a8c8bd7d
gnu: python-django-mailman3: Balance parentheses for inputs. 
* gnu/packages/mail.scm (python-django-mailman3)[inputs]: Balance them.
 2017-04-08 12:56:53 -04:00
ng0
d99a2add28
gnu: Add postorius. 
* gnu/packages/mail.scm (postorius): New variable.

Signed-off-by: Kei Kebreau <kei@openmailbox.org>
 2017-04-08 12:40:28 -04:00
ng0
8a3741e61b
gnu: Add python-django-mailman3. 
* gnu/packages/mail.scm (python-django-mailman3): New variable.

Signed-off-by: Kei Kebreau <kei@openmailbox.org>
 2017-04-08 12:40:23 -04:00
ng0
14d8f6538f
gnu: Add python-django-gravatar2. 
* gnu/packages/django.scm (python-django-gravatar2): New variable.

Signed-off-by: Kei Kebreau <kei@openmailbox.org>
 2017-04-08 12:40:20 -04:00
ng0
e1f06e1192
gnu: Add python-django-allauth. 
* gnu/packages/django.scm (python-django-allauth): New variable.

Signed-off-by: Kei Kebreau <kei@openmailbox.org>
 2017-04-08 12:40:16 -04:00
ng0
ccda568866
gnu: Add python-openid. 
* gnu/packages/python.scm (python-openid): New variable.

Signed-off-by: Kei Kebreau <kei@openmailbox.org>
 2017-04-08 12:40:11 -04:00
ng0
d2b51c08fd
gnu: Add python-defusedxml. 
* gnu/packages/xml.scm (python-defusedxml): New variable.

Signed-off-by: Kei Kebreau <kei@openmailbox.org>
 2017-04-08 12:40:06 -04:00
Feng Shu
72fa66674d
gnu: Add you-get. 
* gnu/packages/video.scm (you-get): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-04-08 15:32:23 +02:00
Arun Isaac
181170c6ee
gnu: octave: Build with gl2ps support. 
* gnu/packages/maths.scm (octave)[inputs]: Add gl2ps.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-04-08 15:24:37 +02:00
Arun Isaac
725d8d2c08
gnu: Add gl2ps. 
* gnu/packages/gl.scm (gl2ps): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-04-08 15:23:41 +02:00
Ricardo Wurmus
1d65b5379b
gnu: r-vegan: Update to 2.4-3. 
* gnu/packages/bioinformatics.scm (r-vegan): Update to 2.4-3.
[arguments]: Remove build phase "revert-test-deletion".
[native-inputs]: Remove "r-vegan-delete-tests-patch".
 2017-04-08 10:25:50 +02:00
Ricardo Wurmus
1c8ee3fcc2
gnu: r-stringi: Update to 1.1.5. 
* gnu/packages/statistics.scm (r-stringi): Update to 1.1.5.
 2017-04-08 10:25:50 +02:00
Leo Famulari
4653341b23
gnu: khal: Update to 0.9.5. 
* gnu/packages/calendar.scm (khal): Update to 0.9.5.
 2017-04-07 22:04:51 -04:00
Mathieu Othacehe
abf0880a67
vm: Add missing module. 
* gnu/build/vm.scm (define-module): Use module (guix build syscalls).

It fixes the following warnings during guix build :

gnu/build/vm.scm:233:3: warning: possibly unbound variable `mount'
gnu/build/vm.scm:238:3: warning: possibly unbound variable `umount'
gnu/build/vm.scm:268:8: warning: possibly unbound variable `mount'
gnu/build/vm.scm:276:8: warning: possibly unbound variable `umount'
gnu/build/vm.scm:315:4: warning: possibly unbound variable `mount'
gnu/build/vm.scm:323:4: warning: possibly unbound variable `umount'

This was not possible until the previous commit because we had to be sure
that Guile core implementation of 'mount' and 'umount' was used in
initrd context.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-04-07 23:30:39 +02:00
ng0
cf47a8a51d
gnu: dovecot-trees: Update to 2.1.0. 
* gnu/packages/mail.scm (dovecot-trees): Update to 2.1.0.
(source): Change to use 'url-fetch'.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-04-07 23:30:38 +02:00
Ricardo Wurmus
d10fa5c7ff
gnu: Add intel-gpu-tools. 
* gnu/packages/admin.scm (intel-gpu-tools): New variable.
 2017-04-07 23:00:53 +02:00
Vasile Dumitrascu
d71b758f3a
gnu: emacs-symon: Update to 20160630. 
* gnu/packagages/emacs.scm (emacs-symon): Update to 20160630 (this is
the latest tag available from the upstream).
[source]: Use github instead of melpa.
[home-page]: Update.

Signed-off-by: Alex Kost <alezost@gmail.com>
 2017-04-07 20:22:29 +03:00
humanitiesNerd
350cfccb06
gnu: Add emacs-adaptive-wrap. 
Suggested-by Ivan Vilata i Balaguer <ivan@selidor.net>.
Fixes <https://bugs.gnu.org/26367>.

* gnu/packages/emacs.scm (emacs-adaptive-wrap): New variable.

Signed-off-by: Alex Kost <alezost@gmail.com>
 2017-04-07 20:22:29 +03:00
Alex Kost
b0dd3436ed
gnu: emacs-debbugs: Update to 0.14. 
* gnu/packages/emacs.scm (emacs-debbugs): Update to 0.14.
 2017-04-07 20:22:29 +03:00
Ludovic Courtès
b25d3bd973
gnu: perf: Add support for C++ symbol demangling. 
* gnu/packages/linux.scm (perf)[inputs]: Add libiberty.
 2017-04-07 17:37:46 +02:00
Mathieu Othacehe
f214d470d7
gnu: ratpoison: Update to 1.4.9. 
* gnu/packages/ratpoison.scm (ratpoison): Update to 1.4.9.
[inputs]: Remove libxinerama. Add libxrandr.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2017-04-07 10:01:54 -04:00
Leo Famulari
6cfb860a7a
gnu: guitarix: Disable webkit features. 
The only version of webkit supported by guitarix is unmaintained and contains a
large number of security vulnerabilities, and should be removed from Guix.

* gnu/packages/audio.scm (guitarix)[inputs]: Remove webkitgtk/gtk+-2.
 2017-04-07 09:37:14 -04:00
Efraim Flashner
d5a3e8f019
gnu: myrepos: Use 'modify-phases' syntax. 
* gnu/packages/version-control.scm (myrepos)[arguments]: Use
'modify-phases' syntax.
 2017-04-07 16:16:14 +03:00
Efraim Flashner
d46e9fcb2c
gnu: myrepos: Update to 1.20170129. 
* gnu/packages/version-control.scm (myrepos): Update to 1.20170129.
[source]: Source tarballs have been removed from Github, use
git-download to download from upstream repository.
[home-page]: Use https.
 2017-04-07 16:16:13 +03:00
Efraim Flashner
ecc39b3f55
gnu: gnubik: Update to 2.4.3. 
* gnu/packages/games.scm (gnubik): Update to 2.4.3.
 2017-04-07 16:16:13 +03:00
Ben Woodcroft
37982693ca
gnu: vsearch: Update to 2.4.3. 
* gnu/packages/bioinformatics.scm (vsearch): Update to 2.4.3.
 2017-04-07 21:35:07 +10:00
Leo Famulari
fbd6fb1a9d
gnu: qemu: Update to 2.8.1 [security fixes]. 
Fixes CVE-2016-{9602,9603} and CVE-2017-{2615,2620,2630,5667,5931}.

* gnu/packages/qemu.scm (qemu): Update to 2.8.1.
* gnu/packages/patches/qemu-CVE-2017-2615.patch,
gnu/packages/patches/qemu-CVE-2017-2620.patch,
gnu/packages/patches/qemu-CVE-2017-2630.patch,
gnu/packages/patches/qemu-CVE-2017-5667.patch,
gnu/packages/patches/qemu-CVE-2017-5931.patch: Delete files.
* gnu/local.mk (dist_patch_DATA): Remove them.
 2017-04-07 00:53:02 -04:00
Leo Famulari
0715c0e69c
gnu: surf: Update to 2.0. 
* gnu/packages/suckless.scm (surf): Update to 2.0.
[inputs]: Replace webkitgtk/gtk+-2 with webkitgtk.
 2017-04-06 22:44:07 -04:00
Ludovic Courtès
6b6aca9b36
gnu: flann: Move .mex file to a separate "octave" output. 
That way the closure of flann:out is down from 1 GiB
to 290 MiB.

* gnu/packages/maths.scm (flann)[outputs]: New field.
[arguments]: Add 'set-octave-directory' phase.
 2017-04-07 00:17:16 +02:00
Leo Famulari
3be437398e
gnu: webkitgtk: Update to 2.16.1. 
* gnu/packages/webkit.scm (webkitgtk): Update to 2.16.1.
 2017-04-06 17:24:57 -04:00
Ricardo Wurmus
fe418cc5b2
gnu: armadillo: Change license to ASL 2.0. 
Armadillo versions 7.800 and onwards are licensed under the Apache License
2.0.

* gnu/packages/maths.scm (armadillo)[license]: Change to ASL 2.0.
 2017-04-06 15:42:18 +02:00
Marius Bakke
2aa78c8f04
gnu: re2: Update to 2017-04-01. 
* gnu/packages/regex.scm (re2): Update to 2017-04-01.
 2017-04-06 15:07:55 +02:00
Marius Bakke
fdcc9163d5
gnu: feh: Update to 2.18.3. 
* gnu/packages/image-viewers.scm (feh): Update to 2.18.3.
 2017-04-06 15:05:40 +02:00
Marius Bakke
2c273a82f3
gnu: libusb: Update to 1.0.21. 
* gnu/packages/libusb.scm (libusb): Update to 1.0.21.
[home-page]: Update to new URL.
 2017-04-06 15:03:07 +02:00
Marius Bakke
05b662663d
gnu: libmtp: Update to 1.1.13 [security fixes]. 
* gnu/packages/libusb.scm (libmtp): Update to 1.1.13.
 2017-04-06 14:58:05 +02:00