Commit graph

73176 commits

Author SHA1 Message Date
Efraim Flashner
ebf88ff593
gnu: slurm: Update note about slurm versions.
* gnu/packages/parallel.scm: Update note about what slurm versions
should be kept.
2021-01-30 23:35:31 +02:00
Efraim Flashner
9008e0ec3f
gnu: parallel: Update to 20210122.
* gnu/packages/parallel.scm (parallel): Update to 20210122.
2021-01-30 23:27:45 +02:00
Nicolas Goaziou
a2a17c3fc6
gnu: blender-2.79: Fix build.
* gnu/packages/graphics.scm (blender-2.79)[inputs]: Add pugixml.
2021-01-30 18:38:41 +01:00
Ludovic Courtès
ede4a81947
guix system: Adjust 'upgrade-shepherd-services' to shepherd service change.
Fixes a regression introduced in 95f72dcd7a.

* guix/scripts/system/reconfigure.scm (upgrade-shepherd-services)[target-services]:
Add call to 'shepherd-configuration-services'.
2021-01-30 18:23:52 +01:00
Nicolas Goaziou
e629d72216
gnu: blender: Fix build.
* gnu/packages/graphics.scm (openimageio): Update to 2.2.10.1.
[arguments]: Do not use system pugixml.
[inputs]: Add fmt.
* gnu/packages/graphics.scm (blender)[inputs]: Add "pugixml".
2021-01-30 17:59:34 +01:00
Mathieu Othacehe
deda7029e5
gnu: alacritty: Fix build.
This is a follow-up of 880e6334b7.

* gnu/packages/terminals.scm (alacritty)[arguments]: Rename "rust-dirs-2.0"
into "rust-dirs-2" and "rust-embed-resource-1.3" into "rust-embed-resource-1".
2021-01-30 16:27:34 +01:00
Mathieu Othacehe
f4a32c5d6b
gnu: cuirass: Update to 0.0.1-61.6838ec2.
* gnu/packages/ci.scm (cuirass): Update to 0.0.1-61.6838ec2.
2021-01-30 16:17:00 +01:00
Ludovic Courtès
b84152439c
guix system: Test 'extension-graph' and 'shepherd-graph'.
* tests/guix-system.sh: Test 'guix system extension-graph' and 'guix
system shepherd-graph'.
2021-01-30 15:36:58 +01:00
Maxime Devos
95f72dcd7a
services: shepherd: Allow custom 'shepherd' package.
* gnu/services/shepherd.scm (<shepherd-configuration>): New record.
(shepherd-boot-gexp, shepherd-root-service-type): Use it.
(scm->go, shepherd-configuration-file): Allow passing custom
shepherd package.
* gnu/system.scm (operating-system-shepherd-service-names): Use the new
record.
* guix/scripts/system.scm (export-shepherd-graph): Adjust accordingly.
* doc/guix.texi (Shepherd Services). Document it.

Co-authored-by: Ludovic Courtès <ludo@gnu.org>
2021-01-30 15:36:57 +01:00
nixo
dae521a0c9
gnu: Add julia-json.
* gnu/packages/julia-xyz.scm (julia-json): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2021-01-30 15:36:57 +01:00
nixo
fb634a0e0b
gnu: Add julia-offsetarrays.
* gnu/packages/julia-xyz.scm (julia-offsetarrays): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2021-01-30 15:36:57 +01:00
nixo
20767b9b69
gnu: Add julia-adapt.
* gnu/packages/julia-xyz.scm (julia-adapt): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2021-01-30 15:36:57 +01:00
nixo
c0c21d77d9
gnu: Add julia-parsers.
* gnu/packages/julia-xyz.scm (julia-parsers): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2021-01-30 15:36:57 +01:00
nixo
50f99cc589
gnu: Add julia-fixedpointnumbers.
* gnu/packages/julia-xyz.scm (julia-fixedpointnumbers): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2021-01-30 15:36:57 +01:00
nixo
6545cef5d7
gnu: Add julia-datastructures.
* gnu/packages/julia-xyz.scm (julia-datastructures): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2021-01-30 15:36:57 +01:00
nixo
eccd448c02
gnu: Add julia-orderedcollections.
* gnu/packages/julia-xyz.scm (julia-orderedcollections): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2021-01-30 15:36:56 +01:00
nixo
f7a98af0b9
gnu: julia-compat: Update to 3.25.0.
* gnu/packages/julia-xyz.scm (julia-compat): Update to 3.25.0.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2021-01-30 15:36:56 +01:00
nixo
54721e7eb8
gnu: julia-compat: Set file name according to standards.
* gnu/packages/julia-xyz.scm (julia-compat)[source]: Set 'file-name'
to (git-file-name ...).

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2021-01-30 15:36:56 +01:00
nixo
ba093a6d27
build-system/julia: Don't rely on file name to set module name.
* guix/build/julia-build-system.scm (project.toml->name): New procedure.
  (precompile, check, julia-build): Accept new key argument #:julia-package-name.
* guix/build-system/julia.scm (julia-build): ... add it.
* doc/guix.texi (julia-build-system): Update julia-package-name accordingly.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2021-01-30 15:36:56 +01:00
nixo
a23b384f3f
build-system/julia: Enable tests.
* guix/build-system/julia.scm (julia-build): Set tests? default to #t.
* guix/build/julia-build-system.scm (check): Respect tests? and fix julia
  invocation.
  (%standard-phases): Add check phase after install.
* doc/guix.texi (julia-build-system): Update accordingly.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2021-01-30 15:36:56 +01:00
Nicolas Goaziou
0f27a97c69
gnu: rust-embed-resource-1: Drop minor version from name.
* gnu/packages/crates-io.scm (rust-embed-resource-1): Drop minor version from
name.
* gnu/packages/rust-apps.scm (watchexec): Apply renaming.
2021-01-30 15:34:52 +01:00
Nicolas Goaziou
880e6334b7
gnu: rust-dirs-2: Drop minor version from name.
* gnu/packages/crates-io.scm (rust-dirs-2): Drop minor version from name.
(rust-dirs-1.0):
(rust-term-0.6):
* gnu/packages/rust-apps.scm (fd):
* gnu/packages/sequoia.scm (sequoia):
* gnu/packages/web.scm (castor): Apply renaming.
2021-01-30 15:34:41 +01:00
Nicolas Goaziou
abad76c6b1
gnu: rust-downcast-rs-1: Drop minor version from name.
* gnu/packages/crates-io.scm (rust-downcast-rs-1): Drop minor version from
name.
* gnu/packages/crates-graphics.scm (rust-wayland-client-0.23):
(rust-wayland-client-0.21):
(rust-wayland-server-0.23):
(rust-wayland-server-0.21): Apply renaming.
2021-01-30 15:33:43 +01:00
Nicolas Goaziou
b934f6ce8b
gnu: rust-downcast-rs-1.1: Remove variable.
* gnu/packages/crates-io.scm (rust-downcast-rs-1.1): Remove variable.
* gnu/packages/crates-graphics.scm (rust-wayland-client-0.23):
(rust-wayland-client-0.21):
(rust-wayland-server-0.23):
(rust-wayland-server-0.21): Refer to rust-downcast-rs-1.2 instead.
2021-01-30 15:33:34 +01:00
Nicolas Goaziou
537de152b9
gnu: rust-expat-sys-2: Drop minor version from name.
* gnu/packages/crates-io.scm (rust-expat-sys-2): Drop minor version from name.
(rust-servo-fontconfig-sys-4): Apply renaming.
2021-01-30 15:31:13 +01:00
Mathieu Othacehe
495bd7053c
gnu: cuirass: Update to 0.0.1-60.1e8d075.
* gnu/packages/ci.scm (cuirass): Update to 0.0.1-60.1e8d075.
2021-01-30 14:28:18 +01:00
Marius Bakke
f4159867ab
gnu: picocom: Fix cross-compilation.
* gnu/packages/terminals.scm (picocom)[arguments]: Use CC-FOR-TARGET instead
of "gcc".
2021-01-30 12:32:42 +01:00
Marius Bakke
229f944b70
gnu: uBlock Origin: Update to 1.33.0.
* gnu/packages/browser-extensions.scm (uassets): Update to commit a5b1e3cae.
(ublock-origin): Update to 1.33.0.
2021-01-30 12:32:42 +01:00
Marius Bakke
034abb77a6
gnu: foot: Update to 1.6.2.
* gnu/packages/terminals.scm (foot): Update to 1.6.2.
[native-inputs]: Remove GCC-10.
2021-01-30 12:32:42 +01:00
Marius Bakke
91bfb6d19d
gnu: ungoogled-chromium: Update to 88.0.4324.104-0.4e2679c.
* gnu/packages/chromium.scm (%preserved-third-party-files): Adjust for 88.
(%chromium-version): Set to 88.0.4324.104.
(%ungoogled-revision): Set to 4e2679ce15a53925b34a95aa3e1731751530dc22.
(%ungoogled-origin): Update hash.
(libvpx/chromium): New variable.
(ungoogled-chromium): Update hash.
[arguments]: Patch one file for compatibility with system ICU.
[inputs]: Change from ICU4C-67 to ICU4C-68.  Change from LIBVPX to
LIBVPX/CHROMIUM.
2021-01-30 12:32:42 +01:00
Sharlatan Hellseher
9c8ed43dd8
gnu: Add cl-out123.
* gnu/packages/lisp-xyz.scm (cl-out123, ecl-cl-out123, sbcl-cl-out123): New
  variables.

Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
2021-01-30 11:08:15 +01:00
Guillaume Le Vaillant
e41f8923f9
gnu: Add nq.
* gnu/packages/admin.scm (nq): New variable.
2021-01-30 10:58:17 +01:00
Jakub Kądziołka
104151f4f4
guix: qt-utils: Don't include useless inputs in wrapped variables.
Include only those inputs into XDG_DATA_DIRS having
some subdirectory of /share which is typically used by Qt.

* guix/build/qt-utils.scm (variables-for-wrapping): Take the
  output directory as an argument for special handling. Check for
  subdirectories of /share used by Qt before including inputs in
  XDG_DATA_DIRS.
  (wrap-qt-program*): Pass the output directory to variables-for-wrapping.

Co-authored-by: Hartmut Goebel <h.goebel@crazy-compilers.com>
2021-01-29 23:04:02 +01:00
Jakub Kądziołka
094b6ac009
build-system: qt: Exclude useless inputs from wrapped variables.
* guix/build-system/qt.scm (qt-build)[qt-wrap-excluded-inputs]: New argument.
* guix/build/qt-utils.scm (%qt-wrap-excluded-inputs): New variable.
  (wrap-qt-program*)[qt-wrap-excluded-inputs]: New argument. Filter excluded
  inputs.
  (wrap-qt-program)[qt-wrap-excluded-inputs]: New argument.
  (wrap-all-qt-programs)[qt-wrap-excluded-inputs]: New argument.

Co-authored-by: Hartmut Goebel <h.goebel@crazy-compilers.com>
2021-01-29 23:04:02 +01:00
Hartmut Goebel
4ecc2a2493
guix: qt-utils: Wrapped executables honor user's envvars.
Prior to this change, wrappers did set the specified environment variables to
a fixed value, overwriting any user settings. This inhibited propagating
e.g. XDG_DATA_DIRS from a profile to the application.

Now user environment variables are prefixed (if the variable defines some
"binary" search path, e.g. QT_PLUGIN_PATH) or suffixed (if the variable
defines some config or data search path, e.g. XDG_DATA_DIRS). The code could
also allow to overwrite, anyhow currently no variable is defined like this.

* guix/build/qt-utils.scm (variables-for-wrapping): For each env-var to
  be wrapped, specify whether it should prefix, suffix or overwrite the
  user's variable.
2021-01-29 23:04:02 +01:00
Hartmut Goebel
9085260fcc
guix: qt-build-system, qt-utils: Unify wrapping of qt-programs.
Unify (guix qt-build-system wrap-all-programs) and
(guix qt-utils wrap-qt-program), so both behave the same.
The functions now reside in qt-utils to make them easily available for
packages not using the qt-build-system.

* guix/build/qt-build-system.scm (variables-for-wrapping, wrap-all-programs):
  Move from here ...
* guix/build/qt-utils.scm (variables-for-wrapping, wrap-all-qt-programs):
  ... to here. Base the later on
  (wrap-qt-program*): New function, carved out from old wrap-all-programs.
  (wrap-qt-program): Base on wrap-qt-program*, change arguments in an
  incompatible way.
* gnu/packages/bittorrent.scm (qbittorrent)[arguments]<phases>{wrap-qt}:
  Adjust to new interface of wrap-qt-program.
* gnu/packages/finance.scm (electron-cash): Likewise.
* gnu/packages/geo.scm (qgis): Likewise.
* gnu/packages/password-utils.scm (qtpass): Likewise.
* gnu/packages/video.scm (openshot): Likewise.
* gnu/packages/web-browsers.scm (kristall): Likewise.
2021-01-29 23:04:02 +01:00
Hartmut Goebel
784048c27b
doc: Update guidance about Rust package naming.
* doc/contributing.texi (Rust Crates): Explain versions suffix based on
  packages version and Crate "caret" versioning.
2021-01-29 22:51:23 +01:00
Leo Famulari
42008264d9
gnu: Remove avogadro.
This package fails to build and has been superseded by avogadro2.

* gnu/packages/chemistry.scm (avogadro): Remove variable.
* gnu/packages/patches/avogadro-boost148.patch,
gnu/packages/patches/avogadro-eigen3-update.patch,
gnu/packages/patches/avogadro-python-eigen-lib.patch: Delete files.
* gnu/local.mk (dist_patch_DATA): Remove them.
2021-01-29 15:19:02 -05:00
Maxim Cournoyer
23a5dcce1d
gnu: grocsvs: Remove package.
This package depends on Python 2 and doesn't build anymore.  Upstream doesn't
seem active, but if they ever port it to Python 3, they should let people know
here: https://github.com/grocsvs/grocsvs/issues/6.

* gnu/packages/bioinformatics.scm (grocsvs): Delete.
2021-01-29 10:58:25 -05:00
Maxim Cournoyer
de8dc9039b
gnu: syncthing-gtk: Switch source to use Debian's Python 3 port.
* gnu/packages/syncthing.scm (syncthing-gtk)[source]: Adjust to use the Debian
Python 3 port.
[phases]{remove-windows.py}: New phase.
2021-01-29 10:58:25 -05:00
Maxim Cournoyer
aa0d1e3306
gnu: python2-virtualenv: Remove package.
* gnu/packages/python-xyz.scm (python2-virtualenv): Delete.
2021-01-29 10:58:25 -05:00
Maxim Cournoyer
64c8f49ccc
gnu: python2-pbr: Remove package.
* gnu/packages/python-xyz.scm (python2-pbr-minimal)
(python2-pbr): Delete variables.
2021-01-29 10:58:25 -05:00
Maxim Cournoyer
674391d0cb
gnu: python2-fixtures: Remove package.
* gnu/packages/check.scm (python2-fixtures-bootstrap)
(python2-fixtures): Delete variables.
2021-01-29 10:58:24 -05:00
Maxim Cournoyer
a215577f06
gnu: python2-testtools: Remove package.
* gnu/packages/check.scm (python2-testtools-bootstrap)
(python2-testtools): Delete variables.
2021-01-29 10:58:24 -05:00
Maxim Cournoyer
a59cdc108b
gnu: python2-testscenarios: Remove package.
* gnu/packages/check.scm (python2-testscenarios-bootstrap)
(python2-testscenarios): Delete variables.
2021-01-29 10:58:24 -05:00
Maxim Cournoyer
b0020da044
gnu: python2-subunit: Remove package.
* gnu/packages/check.scm (python2-subunit-bootstrap)
(python2-subunit): Delete variables.
2021-01-29 10:58:24 -05:00
Maxim Cournoyer
d8b88603ee
gnu: python2-testrepository: Remove package.
* gnu/packages/check.scm (python2-testrepository-bootstrap)
(python2-testrepository): Delete variables.
2021-01-29 10:58:24 -05:00
Maxim Cournoyer
cefe8d6026
gnu: python2-requests-mock: Remove package.
* gnu/packages/python-xyz.scm (python2-requests-mock): Delete.
2021-01-29 10:58:24 -05:00
Maxim Cournoyer
27915b48bf
gnu: python2-tox: Remove package.
* gnu/packages/python-xyz.scm (python2-tox): Delete.
2021-01-29 10:58:24 -05:00
Maxim Cournoyer
e86c67030a
gnu: python2-pathpy: Remove package.
* gnu/packages/python-xyz.scm (python2-pathpy): Delete.
2021-01-29 10:58:23 -05:00