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Author SHA1 Message Date
Ricardo Wurmus
8ce704b2b1
gnu: Add python-audioread. 
* gnu/packages/mp3.scm (python-audioread): New variable.
 2019-12-28 12:44:15 +01:00
Brett Gilio
2fca99c24d
gnu: emacs-ccls: Revise license. 
* gnu/packages/emacs-xyz.scm (emacs-ccls): Change license to reflect
  MIT/Expat-style license.
 2019-12-27 20:37:27 -06:00
Brett Gilio
b1d16cb6ac
gnu: emacs-ccls: Update to 0.1-4. 
* gnu/packages/emacs-xyz.scm (emacs-ccls): Update to 0.1-4. Adds support for
  interacting with library folders.
 2019-12-27 20:36:15 -06:00
Brett Gilio
c7e434c039
gnu: emacs-paren-face: Update to 1.0.5. 
* gnu/packages/emacs-xyz.scm (emacs-paren-face): Update to 1.0.5.
 2019-12-27 19:36:23 -06:00
Brett Gilio
7f03fa9b21
gnu: emacs-keyfreq: Adjust indentation. 
* gnu/packages/emacs-xyz.scm (emacs-keyfreq): Adjust indentation.
 2019-12-27 19:35:56 -06:00
Brett Gilio
ff9aa63dac
gnu: emacs-d-mode: Update to 2.0.10. 
* gnu/packages/emacs-xyz.scm (emacs-d-mode): Update to 2.0.10.
 2019-12-27 19:35:44 -06:00
Brett Gilio
300a5dea3d
gnu: emacs-tablist: Adjust indentation. 
* gnu/packages/emacs-xyz.scm (emacs-tablist): Adjust indentation.
 2019-12-27 19:35:22 -06:00
Brett Gilio
73f1273375
gnu: emacs-mmm-mode: Adjust indentation. 
* gnu/packages/emacs-xyz.scm (emacs-mmm-mode): Adjust indentation.
 2019-12-27 19:35:03 -06:00
Brett Gilio
b1c223cc90
gnu: emacs-graphviz-dot-mode: Update to 0.4.1. 
* gnu/packages/emacs-xyz.scm (emacs-graphviz-dot-mode): Update to 0.4.1.
 2019-12-27 19:34:42 -06:00
Brett Gilio
ed07acbfab
gnu: emacs-google-maps: Adjust indentation. 
* gnu/packages/emacs-xyz.scm (emacs-google-maps): Adjust indentation.
 2019-12-27 19:34:12 -06:00
Brett Gilio
889aa5800a
gnu: emacs-direnv: Adjust indentation. 
* gnu/packages/emacs-xyz.scm (emacs-direnv): Adjust indentation.
 2019-12-27 19:33:44 -06:00
Brett Gilio
2bd859f0c4
gnu: emacs-calfw: Adjust indentation. 
* gnu/packages/emacs-xyz.scm (emacs-calfw): Adjust indentation.
 2019-12-27 19:33:22 -06:00
Brett Gilio
499570c6e6
gnu: emacs-autothemer: Adjust indentation. 
* gnu/packages/emacs-xyz.scm (emacs-autothemer): Adjust indentation.
 2019-12-27 19:33:00 -06:00
Brett Gilio
e79b94b69e
gnu: emacs-ag: Adjust indentation. 
* gnu/packages/emacs-xyz.scm (emacs-ag): Adjust indentation.
 2019-12-27 19:32:30 -06:00
Brett Gilio
8fccd2003c
gnu: emacs-emms-mode-line-cycle: Adjust indentation. 
* gnu/packages/emacs-xyz.scm (emacs-emms-mode-line-cycle): Adjust indentation.
 2019-12-27 19:31:46 -06:00
Brett Gilio
7c776b255f
gnu: emacs-wget: Adjust indentation. 
* gnu/packages/emacs-xyz.scm (emacs-wget): Adjust indentation.
 2019-12-27 19:31:17 -06:00
Brett Gilio
5b225909bc
gnu: emacs-reformatter: Adjust indentation. 
* gnu/packages/emacs-xyz.scm (emacs-reformatter): Adjust indentation.
 2019-12-27 19:30:51 -06:00
Brett Gilio
9af09e9c8f
gnu: emacs-dante: Modify version number. 
* gnu/packages/emacs-xyz.scm (emacs-dante): Use version number matching tag reference.
 2019-12-27 19:30:16 -06:00
Brett Gilio
e0f88157c1
gnu: emacs-haskell-mode: Adjust indentation. 
* gnu/packages/emacs-xyz.scm (emacs-haskell-mode): Adjust indentation.
 2019-12-27 19:29:52 -06:00
Brett Gilio
0546537f9d
gnu: emacs-graphql: Adjust indentation. 
* gnu/packages/emacs-xyz.scm (emacs-graphql): Adjust indentation.
 2019-12-27 19:29:03 -06:00
Brett Gilio
dd33cff68a
gnu: emacs-minions: Update to 0.3.2. 
* gnu/packages/emacs-xyz.scm (emacs-minions): Update to 0.3.2.
 2019-12-27 19:28:44 -06:00
Brett Gilio
421845afaf
gnu: emacs-with-editor: Update to 2.9.0. 
* gnu/packages/emacs-xyz.scm (emacs-with-editor): Update to 2.9.0.
 2019-12-27 19:28:21 -06:00
Brett Gilio
97b22ac571
gnu: emacs-doom-themes: Update to 2.1.6-3. 
* gnu/packages/emacs-xyz.scm (emacs-doom-themes): Update to 2.1.6-3.
[arguments]<emacs-batch-disable-compilation>: Add new "material" theme to list
of exceptions.
 2019-12-27 17:05:00 -06:00
Leo Prikler
1cc0445e40
gnu: emacs-doom-themes: Only disable breaking compilations. 
* gnu/packages/emacs-xyz.scm (emacs-doom-themes)[phases]:
<build>: Readd this phase.
<disable-breaking-compilation>: Add this phase to work around single file
errors in bytecompilation.

Signed-off-by: Brett Gilio <brettg@gnu.org>
 2019-12-27 16:57:28 -06:00
Leo Prikler
9ce3f7f6dc
guix: emacs-utils: Add emacs-batch-disable-compilation. 
* guix/build/emacs-utils.scm (emacs-batch-disable-compilation):
New procedure.

Signed-off-by: Brett Gilio <brettg@gnu.org>
 2019-12-27 16:54:52 -06:00
Ricardo Wurmus
bd824de3ad
gnu: r-inspect: Update to 1.16.1. 
* gnu/packages/bioconductor.scm (r-inspect): Update to 1.16.1.
[propagated-inputs]: Add r-gdata.
 2019-12-27 21:30:26 +01:00
Ricardo Wurmus
c314ff7cd4
gnu: r-multiassayexperiment: Update to 1.12.1. 
* gnu/packages/bioconductor.scm (r-multiassayexperiment): Update to 1.12.1.
 2019-12-27 21:30:26 +01:00
Ricardo Wurmus
0718948912
gnu: r-rgadem: Update to 2.34.1. 
* gnu/packages/bioconductor.scm (r-rgadem): Update to 2.34.1.
[propagated-inputs]: Add r-genomicranges.
 2019-12-27 21:30:26 +01:00
Ricardo Wurmus
0be4d7de9c
gnu: r-clusterprofiler: Update to 3.14.2. 
* gnu/packages/bioconductor.scm (r-clusterprofiler): Update to 3.14.2.
 2019-12-27 21:30:26 +01:00
Ricardo Wurmus
7621bf2d19
gnu: r-enrichplot: Update to 1.6.1. 
* gnu/packages/bioconductor.scm (r-enrichplot): Update to 1.6.1.
 2019-12-27 21:30:26 +01:00
Ricardo Wurmus
eb6d1adf15
gnu: r-biocsingular: Update to 1.2.1. 
* gnu/packages/bioconductor.scm (r-biocsingular): Update to 1.2.1.
 2019-12-27 21:30:26 +01:00
Ricardo Wurmus
be94400cd4
gnu: r-affycoretools: Update to 1.58.3. 
* gnu/packages/bioconductor.scm (r-affycoretools): Update to 1.58.3.
 2019-12-27 21:30:26 +01:00
Ricardo Wurmus
366cb041e1
gnu: r-car: Update to 3.0-6. 
* gnu/packages/statistics.scm (r-car): Update to 3.0-6.
 2019-12-27 21:30:26 +01:00
Ricardo Wurmus
e2eb77598a
gnu: r-robust: Update to 0.4-18.2. 
* gnu/packages/statistics.scm (r-robust): Update to 0.4-18.2.
 2019-12-27 21:30:26 +01:00
Ricardo Wurmus
96211e3f33
gnu: r-bigmemory: Update to 4.5.36. 
* gnu/packages/statistics.scm (r-bigmemory): Update to 4.5.36.
 2019-12-27 21:30:26 +01:00
Ricardo Wurmus
adc1f22332
gnu: r-foreign: Update to 0.8-74. 
* gnu/packages/statistics.scm (r-foreign): Update to 0.8-74.
 2019-12-27 21:30:26 +01:00
Ricardo Wurmus
976ef4cd52
gnu: r-slam: Update to 0.1-47. 
* gnu/packages/cran.scm (r-slam): Update to 0.1-47.
 2019-12-27 21:30:26 +01:00
Ricardo Wurmus
1d3c31a23c
gnu: r-bibtex: Update to 0.4.2.1. 
* gnu/packages/cran.scm (r-bibtex): Update to 0.4.2.1.
 2019-12-27 21:30:25 +01:00
Ricardo Wurmus
04b181cb15
gnu: r-topgo: Update to 2.38.1. 
* gnu/packages/bioinformatics.scm (r-topgo): Update to 2.38.1.
 2019-12-27 21:30:25 +01:00
Ricardo Wurmus
4997ff5c1b
gnu: r-summarizedexperiment: Update to 1.16.1. 
* gnu/packages/bioinformatics.scm (r-summarizedexperiment): Update to 1.16.1.
 2019-12-27 21:30:25 +01:00
Ricardo Wurmus
ba17429d67
gnu: r-delayedarray: Update to 0.12.1. 
* gnu/packages/bioinformatics.scm (r-delayedarray): Update to 0.12.1.
 2019-12-27 21:30:25 +01:00
Ricardo Wurmus
152a408051
gnu: r-biocparallel: Update to 1.20.1. 
* gnu/packages/bioinformatics.scm (r-biocparallel): Update to 1.20.1.
 2019-12-27 21:30:25 +01:00
Ricardo Wurmus
827d0fa846
gnu: r-shortread: Update to 1.44.1. 
* gnu/packages/bioinformatics.scm (r-shortread): Update to 1.44.1.
 2019-12-27 21:30:21 +01:00
Christopher Baines
abfe3c5aa2
gnu: guix-data-service: Update to 0.0.1-12.f56935a. 
* gnu/packages/web.scm (guix-data-service): Update to 0.0.1-12.f56935a.
 2019-12-27 14:47:29 +00:00
Ludovic Courtès
b3011dbbd2
doc: Mention "make authenticate". 
* doc/contributing.texi (Building from Git): Add instructions to run
'git verify-commit' and 'make authenticate'.
 2019-12-27 13:52:49 +01:00
Ludovic Courtès
787766ed1e
git-authenticate: Keep a local cache of previously-authenticated commits. 
A list of already-authenticated commits is kept in
~/.cache/guix/authentication.  This speeds up subsequent "make
authenticate" invocations.

* build-aux/git-authenticate.scm (authenticated-commit-cache-file)
(previously-authenticated-commits, cache-authenticated-commit): New
procedures.
(git-authenticate): Define 'authenticated-commits' and pass it as a
third argument to 'commit-difference'.  Add call to
'cache-authenticated-commit'.  Don't display signing stats when STATS is
null.
 2019-12-27 13:52:49 +01:00
Ludovic Courtès
785af04a75
git: 'commit-difference' takes a list of excluded commits. 
* guix/git.scm (commit-closure): Add 'visited' optional parameter.
(commit-difference): Add 'excluded' optional parameter; pass second
argument to 'commit-closure'.
* tests/git.scm ("commit-difference, excluded commits"): New test.
 2019-12-27 13:52:49 +01:00
Ludovic Courtès
1e43ab2c03
Add 'build-aux/git-authenticate.scm'. 
* build-aux/git-authenticate.scm: New file.
* Makefile.am (EXTRA_DIST): Add it.
(commit_v1_0_1): New variable.
(authenticate): New target.
 2019-12-27 13:52:49 +01:00
Nicolas Goaziou
6ab59cfd27
gnu: emacs-org-contrib: Update to 20191226. 
* gnu/packages/emacs-xyz.scm (emacs-org-contrib): Update to 20191226.
 2019-12-27 09:44:26 +01:00
Nicolas Goaziou
50257d2764
gnu: emacs-org: Update to 9.3.1. 
* gnu/packages/emacs-xyz.scm (emacs-org): Update to 9.3.1.
 2019-12-27 09:42:02 +01:00