Ricardo Wurmus
|
876e05bfce
|
gnu: r-tximport: Update to 1.16.1.
* gnu/packages/bioinformatics.scm (r-tximport): Update to 1.16.1.
|
2020-06-13 01:19:43 +02:00 |
|
Ricardo Wurmus
|
40a4772f09
|
gnu: r-mutationalpatterns: Update to 2.0.0.
* gnu/packages/bioinformatics.scm (r-mutationalpatterns): Update to 2.0.0.
|
2020-06-13 01:19:43 +02:00 |
|
Ricardo Wurmus
|
3c53617efc
|
gnu: r-rcas: Update to 1.14.0.
* gnu/packages/bioinformatics.scm (r-rcas): Update to 1.14.0.
[propagated-inputs]: Remove r-annotationdbi, r-biomart, r-dbi, r-knitr,
r-motifrg, r-org-hs-eg-db, and r-topgo; add r-bsgenome, r-gprofiler2,
r-iranges, and r-ranger.
[native-inputs]: Add r-knitr.
|
2020-06-13 01:19:43 +02:00 |
|
Ricardo Wurmus
|
261d931406
|
gnu: r-bamsignals: Update to 1.20.0.
* gnu/packages/bioinformatics.scm (r-bamsignals): Update to 1.20.0.
[native-inputs]: Add r-knitr.
|
2020-06-13 01:19:43 +02:00 |
|
Ricardo Wurmus
|
8f08457f05
|
gnu: r-rhtslib: Update to 1.20.0.
* gnu/packages/bioinformatics.scm (r-rhtslib): Update to 1.20.0.
[native-inputs]: Add r-knitr.
|
2020-06-13 01:19:42 +02:00 |
|
Ricardo Wurmus
|
52ce0d299d
|
gnu: r-zlibbioc: Update to 1.34.0.
* gnu/packages/bioinformatics.scm (r-zlibbioc): Update to 1.34.0.
|
2020-06-13 01:19:42 +02:00 |
|
Ricardo Wurmus
|
239ca0f3bd
|
gnu: r-motifrg: Update to 1.31.0.
* gnu/packages/bioinformatics.scm (r-motifrg): Update to 1.31.0.
|
2020-06-13 01:19:42 +02:00 |
|
Ricardo Wurmus
|
40ba4e8466
|
gnu: r-seqlogo: Update to 1.54.3.
* gnu/packages/bioinformatics.scm (r-seqlogo): Update to 1.54.3.
|
2020-06-13 01:19:42 +02:00 |
|
Ricardo Wurmus
|
837e7634d9
|
gnu: r-genomation: Update to 1.20.0.
* gnu/packages/bioinformatics.scm (r-genomation): Update to 1.20.0.
[native-inputs]: Add r-knitr.
|
2020-06-13 01:19:42 +02:00 |
|
Ricardo Wurmus
|
2d537b5afc
|
gnu: r-seqpattern: Update to 1.20.0.
* gnu/packages/bioinformatics.scm (r-seqpattern): Update to 1.20.0.
|
2020-06-13 01:19:42 +02:00 |
|
Ricardo Wurmus
|
e6df69a84d
|
gnu: r-impute: Update to 1.62.0.
* gnu/packages/bioinformatics.scm (r-impute): Update to 1.62.0.
|
2020-06-13 01:19:42 +02:00 |
|
Ricardo Wurmus
|
d9b23ec47c
|
gnu: r-bsgenome: Update to 1.56.0.
* gnu/packages/bioinformatics.scm (r-bsgenome): Update to 1.56.0.
[propagated-inputs]: Add r-matrixstats.
|
2020-06-13 01:19:42 +02:00 |
|
Ricardo Wurmus
|
543fd63c2e
|
gnu: r-topgo: Update to 2.40.0.
* gnu/packages/bioinformatics.scm (r-topgo): Update to 2.40.0.
|
2020-06-13 01:19:42 +02:00 |
|
Ricardo Wurmus
|
a285314e29
|
gnu: r-genomicfeatures: Update to 1.40.0.
* gnu/packages/bioinformatics.scm (r-genomicfeatures): Update to 1.40.0.
[native-inputs]: Add r-knitr.
|
2020-06-13 01:19:42 +02:00 |
|
Ricardo Wurmus
|
f85794edb8
|
gnu: r-rtracklayer: Update to 1.48.0.
* gnu/packages/bioinformatics.scm (r-rtracklayer): Update to 1.48.0.
|
2020-06-13 01:19:42 +02:00 |
|
Ricardo Wurmus
|
58613ca1e5
|
gnu: r-genomicalignments: Update to 1.24.0.
* gnu/packages/bioinformatics.scm (r-genomicalignments): Update to 1.24.0.
|
2020-06-13 01:19:42 +02:00 |
|
Ricardo Wurmus
|
87c98cf701
|
gnu: r-summarizedexperiment: Update to 1.18.1.
* gnu/packages/bioinformatics.scm (r-summarizedexperiment): Update to 1.18.1.
[native-inputs]: Add r-knitr.
|
2020-06-13 01:19:41 +02:00 |
|
Ricardo Wurmus
|
46e103a1b5
|
gnu: r-delayedarray: Update to 0.14.0.
* gnu/packages/bioinformatics.scm (r-delayedarray): Update to 0.14.0.
[propagated-inputs]: Remove r-biocparallel.
|
2020-06-13 01:19:41 +02:00 |
|
Ricardo Wurmus
|
1f9c87a442
|
gnu: r-rsamtools: Update to 2.4.0.
* gnu/packages/bioinformatics.scm (r-rsamtools): Update to 2.4.0.
|
2020-06-13 01:19:41 +02:00 |
|
Ricardo Wurmus
|
d3491d4dad
|
gnu: r-biostrings: Update to 2.56.0.
* gnu/packages/bioinformatics.scm ( r-biostrings): Update to 2.56.0.
[propagated-inputs]: Add r-crayon.
|
2020-06-13 01:19:41 +02:00 |
|
Ricardo Wurmus
|
cb486f16da
|
gnu: r-biocparallel: Update to 1.22.0.
* gnu/packages/bioinformatics.scm (r-biocparallel): Update to 1.22.0.
[native-inputs]: Add r-knitr.
|
2020-06-13 01:19:41 +02:00 |
|
Ricardo Wurmus
|
e87e6cc89d
|
gnu: r-biomart: Update to 2.44.0.
* gnu/packages/bioinformatics.scm (r-biomart): Update to 2.44.0.
|
2020-06-13 01:19:41 +02:00 |
|
Ricardo Wurmus
|
920224771f
|
gnu: r-annotationdbi: Update to 1.50.0.
* gnu/packages/bioinformatics.scm (r-annotationdbi): Update to 1.50.0.
[native-inputs]: Add r-knitr.
|
2020-06-13 01:19:41 +02:00 |
|
Ricardo Wurmus
|
7d91e3bed4
|
gnu: r-biobase: Update to 2.48.0.
* gnu/packages/bioinformatics.scm (r-biobase): Update to 2.48.0.
|
2020-06-13 01:19:41 +02:00 |
|
Ricardo Wurmus
|
087a97f8df
|
gnu: r-genomicranges: Update to 1.40.0.
* gnu/packages/bioinformatics.scm (r-genomicranges): Update to 1.40.0.
[native-inputs]: Add r-knitr.
|
2020-06-13 01:19:41 +02:00 |
|
Ricardo Wurmus
|
e0d40fa275
|
gnu: r-xvector: Update to 0.28.0.
* gnu/packages/bioinformatics.scm (r-xvector): Update to 0.28.0.
|
2020-06-13 01:19:41 +02:00 |
|
Ricardo Wurmus
|
49c766d0bb
|
gnu: r-limma: Update to 3.44.1.
* gnu/packages/bioinformatics.scm (r-limma): Update to 3.44.1.
|
2020-06-13 01:19:41 +02:00 |
|
Ricardo Wurmus
|
cdd83b2e22
|
gnu: r-variantannotation: Update to 1.34.0.
* gnu/packages/bioinformatics.scm (r-variantannotation): Update to 1.34.0.
|
2020-06-13 01:19:41 +02:00 |
|
Ricardo Wurmus
|
c14d59d9ad
|
gnu: r-edger: Update to 3.30.3.
* gnu/packages/bioinformatics.scm (r-edger): Update to 3.30.3.
|
2020-06-13 01:19:41 +02:00 |
|
Ricardo Wurmus
|
506735eea6
|
gnu: r-genomeinfodb: Update to 1.24.0.
* gnu/packages/bioinformatics.scm (r-genomeinfodb): Update to 1.24.0.
|
2020-06-13 01:19:40 +02:00 |
|
Ricardo Wurmus
|
8a38b676da
|
gnu: r-iranges: Update to 2.22.2.
* gnu/packages/bioinformatics.scm (r-iranges): Update to 2.22.2.
|
2020-06-13 01:19:40 +02:00 |
|
Ricardo Wurmus
|
f189f536be
|
gnu: r-s4vectors: Update to 0.26.1.
* gnu/packages/bioinformatics.scm (r-s4vectors): Update to 0.26.1.
|
2020-06-13 01:19:40 +02:00 |
|
Ricardo Wurmus
|
1a9de6cfe8
|
gnu: r-bioccheck: Update to 1.24.0.
* gnu/packages/bioinformatics.scm (r-bioccheck): Update to 1.24.0.
[native-inputs]: Add r-knitr.
|
2020-06-13 01:19:40 +02:00 |
|
Ricardo Wurmus
|
9f416be83d
|
gnu: r-biocstyle: Update to 2.16.0.
* gnu/packages/bioinformatics.scm (r-biocstyle): Update to 2.16.0.
[native-inputs]: Add r-knitr.
|
2020-06-13 01:19:40 +02:00 |
|
Ricardo Wurmus
|
1ca88fb8e9
|
gnu: r-biocviews: Update to 1.56.0.
* gnu/packages/bioinformatics.scm (r-biocviews): Update to 1.56.0.
|
2020-06-13 01:19:40 +02:00 |
|
Ricardo Wurmus
|
5de96ae98b
|
gnu: r-grohmm: Update to 1.22.0.
* gnu/packages/bioinformatics.scm (r-grohmm): Update to 1.22.0.
|
2020-06-13 01:19:40 +02:00 |
|
Ricardo Wurmus
|
bb18d11d85
|
gnu: r-systempiper: Update to 1.22.0.
* gnu/packages/bioinformatics.scm (r-systempiper): Update to 1.22.0.
[propagated-inputs]: Add r-assertthat, r-magrittr, r-rsvg, r-dot, and
r-stringr; remove r-biocgenerics.
[native-inputs]: Add r-knitr.
|
2020-06-13 01:19:40 +02:00 |
|
Ricardo Wurmus
|
681cca95b3
|
gnu: r-shortread: Update to 1.46.0.
* gnu/packages/bioinformatics.scm (r-shortread): Update to 1.46.0.
|
2020-06-13 01:19:40 +02:00 |
|
Ricardo Wurmus
|
3d2899dab5
|
gnu: r-gostats: Update to 2.54.0.
* gnu/packages/bioinformatics.scm (r-gostats): Update to 2.54.0.
|
2020-06-13 01:19:40 +02:00 |
|
Ricardo Wurmus
|
be414286bc
|
gnu: r-category: Update to 2.54.0.
* gnu/packages/bioinformatics.scm (r-category): Update to 2.54.0.
|
2020-06-13 01:19:40 +02:00 |
|
Ricardo Wurmus
|
a8613ff861
|
gnu: r-gseabase: Update to 1.50.1.
* gnu/packages/bioinformatics.scm (r-gseabase): Update to 1.50.1.
[native-inputs]: Add r-knitr.
|
2020-06-13 01:19:40 +02:00 |
|
Ricardo Wurmus
|
7d8b96e24b
|
gnu: r-rbgl: Update to 1.64.0.
* gnu/packages/bioinformatics.scm (r-rbgl): Update to 1.64.0.
|
2020-06-13 01:19:39 +02:00 |
|
Ricardo Wurmus
|
397568dbca
|
gnu: r-annotationforge: Update to 1.30.1.
* gnu/packages/bioinformatics.scm (r-annotationforge): Update to 1.30.1.
[native-inputs]: Add r-knitr.
|
2020-06-13 01:19:39 +02:00 |
|
Ricardo Wurmus
|
db5addba2c
|
gnu: r-dexseq: Update to 1.34.0.
* gnu/packages/bioinformatics.scm (r-dexseq): Update to 1.34.0.
[native-inputs]: Add r-knitr.
|
2020-06-13 01:19:39 +02:00 |
|
Ricardo Wurmus
|
3d7de4ed82
|
gnu: r-deseq2: Update to 1.28.1.
* gnu/packages/bioinformatics.scm (r-deseq2): Update to 1.28.1.
[propagated-inputs]: Remove r-hmisc.
[native-inputs]: Add r-knitr.
|
2020-06-13 01:19:39 +02:00 |
|
Ricardo Wurmus
|
5fdea056c9
|
gnu: r-genefilter: Update to 1.70.0.
* gnu/packages/bioinformatics.scm (r-genefilter): Update to 1.70.0.
[native-inputs]: Add r-knitr.
|
2020-06-13 01:19:39 +02:00 |
|
Ricardo Wurmus
|
c85e5ac0df
|
gnu: r-rgraphviz: Update to 2.32.0.
* gnu/packages/graph.scm (r-rgraphviz): Update to 2.32.0.
|
2020-06-13 01:19:39 +02:00 |
|
Ricardo Wurmus
|
2226a2a8de
|
gnu: r-preprocesscore: Update to 1.50.0.
* gnu/packages/statistics.scm (r-preprocesscore): Update to 1.50.0.
|
2020-06-13 01:19:39 +02:00 |
|
Ricardo Wurmus
|
67a289e5bd
|
gnu: Add r-dot.
* gnu/packages/cran.scm (r-dot): New variable.
|
2020-06-13 01:19:39 +02:00 |
|
Ricardo Wurmus
|
06ceac32e6
|
gnu: Add r-v8.
* gnu/packages/cran.scm (r-v8): New variable.
|
2020-06-13 01:19:39 +02:00 |
|