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Author SHA1 Message Date
Ricardo Wurmus
4db367f8ae
gnu: Add r-msa. 
* gnu/packages/bioconductor.scm (r-msa): New variable.
 2023-02-27 20:38:14 +01:00
Lars-Dominik Braun
086e426d20
gnu: ghc: Disable failing test on i686 
Conditionally, so we don’t rebuild GHC on amd64.

* gnu/packages/haskell.scm (ghc-9.2)[arguments]: Conditionally add phase
'skip-T21694-i686.
 2023-02-27 19:49:31 +01:00
Tobias Geerinckx-Rice
29a278f65c
gnu: sudo: Update to 1.9.13p2. 
* gnu/packages/admin.scm (sudo): Update to 1.9.13p2.
 2023-02-26 01:00:00 +01:00
Ricardo Wurmus
6b6e05cd23
gnu: Add sugar-typing-turtle-activity. 
* gnu/packages/sugar.scm (sugar-typing-turtle-activity): New variable.
 2023-02-27 16:46:06 +01:00
Ricardo Wurmus
c21a2aa1f7
gnu: Add sugar-help-activity. 
* gnu/packages/sugar.scm (sugar-help-activity): New variable.
 2023-02-27 16:13:45 +01:00
Ricardo Wurmus
20aae9ad31
gnu: sugar: Add missing inputs. 
* gnu/packages/sugar.scm (sugar)[propagated-inputs]: Add
gsettings-desktop-schemas, telepathy-mission-control, and upower.
 2023-02-27 16:13:45 +01:00
Ricardo Wurmus
37049110a3
gnu: sugar: Propagate sugar packages. 
* gnu/packages/sugar.scm (sugar)[inputs]: Move sugar-artwork and
sugar-datastore from here...
[propagated-inputs]: ...to here.
 2023-02-27 16:13:45 +01:00
Ricardo Wurmus
596a4db9f9
gnu: sugar: Patch brightness module. 
* gnu/packages/sugar.scm (sugar)[arguments]: Fix syntax error; disable
brightness module.
 2023-02-27 16:13:45 +01:00
Ricardo Wurmus
f14f2752fc
gnu: sugar-toolkit-gtk3: Add missing inputs. 
* gnu/packages/sugar.scm (sugar-toolkit-gtk3)[propagated-inputs]: Add
gstreamer and gst-plugins-espeak.
 2023-02-27 16:13:44 +01:00
Ricardo Wurmus
c8c0d53faf
gnu: sugar: Patch global location of Sugar activities. 
* gnu/packages/sugar.scm (sugar)[arguments]: Update build phase
'fix-references to patch activities directory.
 2023-02-27 16:13:44 +01:00
Ricardo Wurmus
e0ea8fb1ea
gnu: Add gst-plugins-espeak. 
* gnu/packages/gstreamer.scm (gst-plugins-espeak): New variable.
 2023-02-27 16:13:44 +01:00
Simon South
cf9e0508b2
gnu: hwloc: Skip failing test on non-x86 systems. 
* gnu/packages/mpi.scm (hwloc-2)[arguments]<#:phases>: Rename
"skip-test-that-requires-/sys" phase to "skip-tests-that-require-/sys" and
expand to skip additional test requiring /sys on non-x86 systems.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2023-02-27 15:54:10 +01:00
Simon South
be8714b07a
gnu: hwloc: Remove obsolete comments. 
hwloc 2.x become the default with commit 8ec7ca22d3, "gnu: hwloc: Default to
2.x.".

* gnu/packages/mpi.scm (hwloc-1): Remove obsolete comment.
(hwloc-2): Remove obsolete comment.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2023-02-27 15:54:10 +01:00
Bruno Victal
7edf42ddf7
gnu: nvme-cli: Update to 2.3. 
* gnu/packages/linux.scm (nvme-cli): Update to 2.3.
[build-system]: Switch to meson-build-system.
[arguments]: Remove stages. Build documentation.
[native-inputs]: Add pkg-config.
[inputs]: Add libnvme, json-c and zlib.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2023-02-27 15:54:10 +01:00
Bruno Victal
7c4c61919c
gnu: Add libnvme. 
* gnu/packages/linux.scm (libnvme): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2023-02-27 15:54:10 +01:00
Hilton Chain
5ed49cc42b
gnu: podman: Update to 4.4.1. 
* gnu/packages/containers.scm (podman): Update to 4.4.1.
[native-inputs]: Replace go to go-1.19.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2023-02-27 15:54:10 +01:00
Jake Leporte
137390e66c
gnu: Add font-microsoft-cascadia. 
* gnu/packages/fonts.scm (font-microsoft-cascadia): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2023-02-27 15:54:10 +01:00
Andrew Whatson
47a14185b1
gnu: Add scheme48-prescheme. 
* gnu/packages/scheme.scm (scheme48-prescheme): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2023-02-27 15:54:09 +01:00
Simon Tournier
96739561b8
scripts: repl: Extend REPL %load-path with all channels. 
Fixes <https://bugs.gnu.org/61343>.
Reported by 宋文武 <iyzsong@envs.net>.

* guix/scripts/repl.scm (define-command): Before starting the REPL,
call 'current-profile' to populate (%package-module-path).

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2023-02-27 15:54:09 +01:00
Ludovic Courtès
a516a0ba93
gexp: computed-file: Do not honor %guile-for-build. 
This reverts commit 68775338a5.
Fixes <https://issues.guix.gnu.org/61841>.

(%guile-for-build) is a derivation for a specific system,
whereas (default-guile) is a system-independent package.  It's crucial
to preserve this distinction.

See discussion at <https://issues.guix.gnu.org/61255#29>.

* guix/gexp.scm (computed-file-compiler): Honor (default-guile),
not (%guile-for-build).
 2023-02-27 15:54:09 +01:00
Ludovic Courtès
fee1d08f0d
pack: Make sure tests can run without a world rebuild. 
Commit 68380db4c4 moved from
'gexp->derivation', which as a side effect, would lead tests to require
a "world rebuild"--specifically, they'd have to build (default-guile).

This was mitigated by 68775338a5, but that
change introduced another regression.

* guix/scripts/pack.scm (populate-profile-root): Define 'bootstrap?'.
Pass #:guile to 'computed-file', with a value depending on 'bootstrap?'.
* tests/pack.scm ("self-contained-tarball + localstatedir")
("docker-image + localstatedir", "squashfs-image + localstatedir")
("deb archive with symlinks and control files")
("rpm archive can be installed/uninstalled"): Use a <profile> record
instead of a derivation.
 2023-02-27 15:54:09 +01:00
Efraim Flashner
2cf07434d8
gnu: dpkg: Update to 1.21.21. 
* gnu/packages/debian.scm (dpkg): Update to 1.21.21.
 2023-02-27 15:29:27 +02:00
Efraim Flashner
5e23071aa9
gnu: debootstrap: Update to 1.0.128. 
* gnu/packages/debian.scm (debootstrap): Update to 1.0.128.
 2023-02-27 15:29:26 +02:00
Efraim Flashner
90188a66b4
gnu: debian-ports-archive-keyring: Update to 2023.02.21. 
* gnu/packages/debian.scm (debian-ports-archive-keyring): Update to
2023.02.01.
[arguments]: Remove trailing #t from phases.
 2023-02-27 15:29:23 +02:00
Sharlatan Hellseher
55054c1235
gnu: Add cl-calm. 
* gnu/packages/lisp-xyz.scm (cl-calm, ecl-calm, sbcl-calm): New variables.

Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
 2023-02-27 14:13:11 +01:00
Sharlatan Hellseher
a71e455441
gnu: Add cl-cairo2. 
* gnu/packages/lisp-xyz.scm (cl-cairo2, ecl-cl-cairo2, sbcl-cl-cairo2):
  New variables.

Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
 2023-02-27 14:02:28 +01:00
Sharlatan Hellseher
ad854e06b4
gnu: Add cl-sdl2-mixer. 
* gnu/packages/lisp-xyz.scm (cl-sdl2-mixer, ecl-sdl2-mixer,
  sbcl-sdl2-mixer): New variables.

Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
 2023-02-27 13:51:23 +01:00
Sharlatan Hellseher
945edb8654
gnu: cl-sdl2: Remove input labels. 
* gnu/packages/lisp.scm (sbcl-sdl2):
  [arguments]{asd-systems}: Add sdl2/examples.
  {phases}<fix-path>: Remove trailing #f from lambda, use
  search-input-file to link SO library.
  [inputs]: Remove labels, add sbcl-cl-opengl.

Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
 2023-02-27 13:41:32 +01:00
Sharlatan Hellseher
4ca869d151
gnu: cl-sdl2: Update to 0.0.0-2.80410b5. 
* gnu/packages/lisp-xyz.scm (sbcl-sdl2): Update to 0.0.0-2.80410b5.

Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
 2023-02-27 13:38:26 +01:00
Christopher Baines
9ae4846c50
gnu: Fix openmpi related packages. 
This makes these package definitions compatible with the openmpi package which
uses gexps as of f45fc72c28.

* gnu/packages/mpi.scm (openmpi-c++, java-openmpi,
openmpi-thread-multiple)[arguments]: Use gexps.
 2023-02-27 09:34:09 +00:00
Andrew Tropin
17bd024331
gnu: Remove emacs-transient from propagated-inputs. 
emacs-transient is built into emacs already and not required as an explicit
dependency anymore, but having it in propagated-inputs can break things in
various ways: for example emacs-next have a newer version and automatically
pulling older emacs-transient into profile breaks emoji-insert, or
emacs-docker.

* gnu/packages/emacs-xyz.scm (emacs-piem, emacs-clj-deps-new, emacs-dirvish):
Remove emacs-transient from propagated-inputs.
 2023-02-27 07:31:22 +04:00
Ludovic Courtès
81fbf5d71f
gnu: texlive-apa6: Update reference to deprecated package. 
* gnu/packages/tex.scm (texlive-apa6)[inputs]: Replace
'texlive-generic-xstring' with 'texlive-xstring'.
 2023-02-27 01:17:04 +01:00
Ludovic Courtès
3f81ec18e4
gnu: libssh: Fix compilation on GNU/Hurd. 
* gnu/packages/ssh.scm (libssh)[source]: Add snippet.
 2023-02-27 01:16:32 +01:00
Bruno Victal
6bae14f614
gnu: perl-encode: Update to 3.19 [fixes CVE-2021-36770]. 
* gnu/packages/perl.scm (perl-encode): Update to 3.19.
[propagated-inputs]: Remove.

Signed-off-by: Tobias Geerinckx-Rice <me@tobias.gr>
 2023-02-19 01:00:00 +01:00
Timo Wilken
eb87d2c4a0
gnu: Add actionlint. 
Actionlint is a linter for GitHub Action workflow files.

* gnu/packages/check.scm (actionlint): New variable.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2023-02-26 14:29:59 -05:00
Timo Wilken
ec8c7370df
gnu: Add go-github-com-robfig-cron-1.2. 
* gnu/packages/check.scm (go-github-com-robfig-cron-1.2):
  New variable.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2023-02-26 14:29:59 -05:00
Timo Wilken
1a550c93e5
gnu: Add go-golang.org-x-sync-semaphore. 
* gnu/packages/golang.scm (go-golang.org-x-sync-semaphore):
  New variable.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2023-02-26 14:29:59 -05:00
kiasoc5
226103fdd1
gnu: clamav: Update to 0.103.8 [security fixes]. 
Fixes CVE-2023-20032 and CVE-2023-20052.

* gnu/packages/antivirus.scm (clamav): Update to 0.103.8.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2023-02-26 12:44:04 -05:00
Vasile Dumitrascu via Guix-patches via
53a739ae5d
gnu: nano: Update to 7.2. 
* gnu/packages/nano.scm (nano): Update to 7.2.

Signed-off-by: Tobias Geerinckx-Rice <me@tobias.gr>
 2023-02-19 01:00:15 +01:00
Vasile Dumitrascu via Guix-patches via
8d0a8ca1a9
gnu: perl-cgi: Update to 4.55 
* gnu/packages/web.scm (perl-cgi): Update to 4.55.
[native-inputs]: Remove perl-test-deep.

Signed-off-by: Tobias Geerinckx-Rice <me@tobias.gr>
 2023-02-19 01:00:18 +01:00
Vasile Dumitrascu via Guix-patches via
a52074001f
gnu: mpg123: Update to 1.31.2. 
* gnu/packages/mp3.scm (mpg123): Update to 1.31.2.

Signed-off-by: Tobias Geerinckx-Rice <me@tobias.gr>
 2023-02-19 01:00:18 +01:00
Vasile Dumitrascu via Guix-patches via
bf9db38291
gnu: simple-scan: Update to 42.5. 
* gnu/packages/gnome.scm (simple-scan): Update to 42.5.

Signed-off-by: Tobias Geerinckx-Rice <me@tobias.gr>
 2023-02-19 01:00:17 +01:00
Vasile Dumitrascu via Guix-patches via
517740d1dd
gnu: network-manager-applet: Update to 1.30.0. 
* gnu/packages/gnome.scm (network-manager-applet): Update to 1.30.0.
[inputs]: Remove libnotify.

Signed-off-by: Tobias Geerinckx-Rice <me@tobias.gr>
 2023-02-19 01:00:17 +01:00
Vasile Dumitrascu via Guix-patches via
9928b6c495
gnu: xarchiver: Update to 0.5.4.20. 
* gnu/packages/compression.scm (xarchiver): Update to 0.5.4.20.

Signed-off-by: Tobias Geerinckx-Rice <me@tobias.gr>
 2023-02-19 01:00:17 +01:00
Vasile Dumitrascu via Guix-patches via
9beaf9ba82
gnu: adwaita-icon-theme: Update to 43. 
* gnu/packages/gnome.scm (adwaita-icon-theme): Update to 43.

Signed-off-by: Tobias Geerinckx-Rice <me@tobias.gr>
 2023-02-19 01:00:16 +01:00
Efraim Flashner
156da54a50
gnu: moe: Update to 1.13. 
* gnu/packages/moe.scm (moe): Update to 1.13.
 2023-02-26 12:45:27 +02:00
Lars-Dominik Braun
2c0537d374
gnu: idris: Adapt to changed haskell-build-system. 
…which does not support the “static” output any more.

* gnu/packages/idris.scm (idris)[arguments]: Remove phase
restore-libidris_rts.
 2023-02-26 10:26:17 +01:00
Lars-Dominik Braun
6188fe2633
gnu: xmobar: Drop Haskell libraries and documentation. 
* gnu/packages/wm.scm (xmobar)[arguments]: Add
'remove-libraries phase and disable #:haddock?.
 2023-02-26 10:26:17 +01:00
Lars-Dominik Braun
169237aae5
gnu: purescript: Drop Haskell libraries and documentation. 
* gnu/packages/purescript.scm (purescript)[arguments]: Add
'remove-libraries phase and disable #:haddock?.
 2023-02-26 10:26:17 +01:00
Lars-Dominik Braun
7996bd3955
gnu: pandoc: Drop Haskell libraries and documentation. 
* gnu/packages/haskell-xyz.scm (ghc-pandoc): Renamed from pandoc.
(pandoc) [arguments]: Add 'remove-libraries phase and disable #:haddock?.
 2023-02-26 10:26:17 +01:00