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79283 commits

Author SHA1 Message Date
Mathieu Othacehe
0471024acc
scripts: challenge: Fix regression.
This is a follow-up of 3cde5231aa that fixes the
challenge test.

When dealing with uncompressed NAR, the file size is false. Propagate it to
progress-reporter/file as it used to be the case.

* guix/scripts/challenge.scm (call-with-nar): Accept false size.
2021-05-20 11:44:35 +02:00
Ricardo Wurmus
7d3ad4c256
gnu: r-lme4: Update to 1.1-27.
* gnu/packages/statistics.scm (r-lme4): Update to 1.1-27.
[propagated-inputs]: Remove r-statmod.
2021-05-20 10:58:18 +02:00
Ricardo Wurmus
afd1391b2a
gnu: r-diptest: Update to 0.76-0.
* gnu/packages/statistics.scm (r-diptest): Update to 0.76-0.
2021-05-20 10:58:18 +02:00
Ricardo Wurmus
c45cdd9035
gnu: r-statmod: Update to 1.4.36.
* gnu/packages/statistics.scm (r-statmod): Update to 1.4.36.
2021-05-20 10:58:18 +02:00
Ricardo Wurmus
e88fef1f43
gnu: r-viridis: Update to 0.6.1.
* gnu/packages/statistics.scm (r-viridis): Update to 0.6.1.
2021-05-20 10:58:17 +02:00
Ricardo Wurmus
20ab7a023c
gnu: r-rmarkdown: Update to 2.8.
* gnu/packages/statistics.scm (r-rmarkdown): Update to 2.8.
2021-05-20 10:58:17 +02:00
Ricardo Wurmus
5e46eb05fb
gnu: r-hms: Update to 1.1.0.
* gnu/packages/statistics.scm (r-hms): Update to 1.1.0.
2021-05-20 10:58:17 +02:00
Ricardo Wurmus
057b44daa7
gnu: r-devtools: Update to 2.4.1.
* gnu/packages/statistics.scm (r-devtools): Update to 2.4.1.
[propagated-inputs]: Remove r-jsonlite.
2021-05-20 10:58:17 +02:00
Ricardo Wurmus
48ba3ab92f
gnu: r-dplyr: Update to 1.0.6.
* gnu/packages/statistics.scm (r-dplyr): Update to 1.0.6.
[propagated-inputs]: Add r-pillar.
2021-05-20 10:58:17 +02:00
Ricardo Wurmus
0bcf86c35b
gnu: r-tibble: Update to 3.1.2.
* gnu/packages/statistics.scm (r-tibble): Update to 3.1.2.
2021-05-20 10:58:17 +02:00
Ricardo Wurmus
f29a1ade9d
gnu: r-stringi: Update to 1.6.2.
* gnu/packages/statistics.scm (r-stringi): Update to 1.6.2.
2021-05-20 10:58:17 +02:00
Ricardo Wurmus
bf67249071
gnu: r-matrix: Update to 1.3-3.
* gnu/packages/statistics.scm (r-matrix): Update to 1.3-3.
2021-05-20 10:58:17 +02:00
Ricardo Wurmus
cb0ea86dcb
gnu: r-pdftools: Update to 3.0.1.
* gnu/packages/cran.scm (r-pdftools): Update to 3.0.1.
2021-05-20 10:58:17 +02:00
Ricardo Wurmus
7361897630
gnu: r-textshaping: Update to 0.3.4.
* gnu/packages/cran.scm (r-textshaping): Update to 0.3.4.
2021-05-20 10:58:17 +02:00
Ricardo Wurmus
0df3c20243
gnu: r-seuratobject: Update to 4.0.1.
* gnu/packages/cran.scm (r-seuratobject): Update to 4.0.1.
[propagated-inputs]: Remove r-sctransform.
2021-05-20 10:58:17 +02:00
Ricardo Wurmus
428fda3587
gnu: r-rsample: Update to 0.1.0.
* gnu/packages/cran.scm (r-rsample): Update to 0.1.0.
[propagated-inputs]: Add r-lifecycle.
2021-05-20 10:58:17 +02:00
Ricardo Wurmus
e033e7c7d4
gnu: r-clusterr: Update to 1.2.4.
* gnu/packages/cran.scm (r-clusterr): Update to 1.2.4.
2021-05-20 10:58:17 +02:00
Ricardo Wurmus
65c01f0abb
gnu: r-rfast: Update to 2.0.3.
* gnu/packages/cran.scm (r-rfast): Update to 2.0.3.
2021-05-20 10:58:17 +02:00
Ricardo Wurmus
99bdcea1ea
gnu: r-oai: Update to 0.3.2.
* gnu/packages/cran.scm (r-oai): Update to 0.3.2.
[native-inputs]: Add r-knitr.
2021-05-20 10:58:17 +02:00
Ricardo Wurmus
e928599671
gnu: r-proxyc: Update to 0.2.0.
* gnu/packages/cran.scm (r-proxyc): Update to 0.2.0.
2021-05-20 10:58:17 +02:00
Ricardo Wurmus
630239af23
gnu: r-caret: Update to 6.0-88.
* gnu/packages/cran.scm (r-caret): Update to 6.0-88.
2021-05-20 10:58:16 +02:00
Ricardo Wurmus
87bc2e125f
gnu: r-bio3d: Update to 2.4-2.
* gnu/packages/cran.scm (r-bio3d): Update to 2.4-2.
[native-inputs]: Add r-knitr.
2021-05-20 10:58:16 +02:00
Ricardo Wurmus
6d73b27e45
gnu: r-terra: Update to 1.2-10.
* gnu/packages/cran.scm (r-terra): Update to 1.2-10.
2021-05-20 10:58:16 +02:00
Ricardo Wurmus
1ab7a734ff
gnu: r-systemfonts: Update to 1.0.2.
* gnu/packages/cran.scm (r-systemfonts): Update to 1.0.2.
2021-05-20 10:58:16 +02:00
Ricardo Wurmus
3dc2e7b082
gnu: r-ibreakdown: Update to 2.0.1.
* gnu/packages/cran.scm (r-ibreakdown): Update to 2.0.1.
2021-05-20 10:58:16 +02:00
Ricardo Wurmus
8c1e07a266
gnu: r-ggplotify: Update to 0.0.7.
* gnu/packages/cran.scm (r-ggplotify): Update to 0.0.7.
2021-05-20 10:58:16 +02:00
Ricardo Wurmus
72a4b4e34f
gnu: r-msigdbr: Update to 7.4.1.
* gnu/packages/cran.scm (r-msigdbr): Update to 7.4.1.
[propagated-inputs]: Add r-babelgene.
2021-05-20 10:58:16 +02:00
Ricardo Wurmus
76cccb0971
gnu: r-pegas: Update to 1.0-1.
* gnu/packages/cran.scm (r-pegas): Update to 1.0-1.
2021-05-20 10:58:16 +02:00
Ricardo Wurmus
da372ae603
gnu: r-valr: Update to 0.6.3.
* gnu/packages/cran.scm (r-valr): Update to 0.6.3.
2021-05-20 10:58:16 +02:00
Ricardo Wurmus
bb5cc6548e
gnu: r-irkernel: Update to 1.2.
* gnu/packages/cran.scm (r-irkernel): Update to 1.2.
2021-05-20 10:58:16 +02:00
Ricardo Wurmus
c787a71189
gnu: r-fields: Update to 12.3.
* gnu/packages/cran.scm (r-fields): Update to 12.3.
[propagated-inputs]: Add r-viridis.
2021-05-20 10:58:16 +02:00
Ricardo Wurmus
c1648123c2
gnu: r-rnifti: Update to 1.3.1.
* gnu/packages/cran.scm (r-rnifti): Update to 1.3.1.
2021-05-20 10:58:16 +02:00
Ricardo Wurmus
ecf62c7321
gnu: r-softimpute: Update to 1.4-1.
* gnu/packages/cran.scm (r-softimpute): Update to 1.4-1.
[native-inputs]: Add r-knitr.
2021-05-20 10:58:16 +02:00
Ricardo Wurmus
ad88775716
gnu: r-fmsb: Update to 0.7.1.
* gnu/packages/cran.scm (r-fmsb): Update to 0.7.1.
2021-05-20 10:58:16 +02:00
Ricardo Wurmus
2620a65479
gnu: r-ouch: Update to 2.17.
* gnu/packages/cran.scm (r-ouch): Update to 2.17.
2021-05-20 10:58:16 +02:00
Ricardo Wurmus
4341da5882
gnu: r-biocmanager: Update to 1.30.15.
* gnu/packages/cran.scm (r-biocmanager): Update to 1.30.15.
2021-05-20 10:58:15 +02:00
Ricardo Wurmus
cd488787af
gnu: r-rcppparallel: Update to 5.1.4.
* gnu/packages/cran.scm (r-rcppparallel): Update to 5.1.4.
2021-05-20 10:58:15 +02:00
Ricardo Wurmus
d381b1ac33
gnu: r-performance: Update to 0.7.2.
* gnu/packages/cran.scm (r-performance): Update to 0.7.2.
2021-05-20 10:58:15 +02:00
Ricardo Wurmus
dd99de3f13
gnu: r-sandwich: Update to 3.0-1.
* gnu/packages/cran.scm (r-sandwich): Update to 3.0-1.
2021-05-20 10:58:15 +02:00
Ricardo Wurmus
e35482dde9
gnu: r-flextable: Update to 0.6.6.
* gnu/packages/cran.scm (r-flextable): Update to 0.6.6.
2021-05-20 10:58:15 +02:00
Ricardo Wurmus
6ea508485b
gnu: r-sjmisc: Update to 2.8.7.
* gnu/packages/cran.scm (r-sjmisc): Update to 2.8.7.
2021-05-20 10:58:15 +02:00
Ricardo Wurmus
f03f45c927
gnu: r-sjlabelled: Update to 1.1.8.
* gnu/packages/cran.scm (r-sjlabelled): Update to 1.1.8.
2021-05-20 10:58:15 +02:00
Ricardo Wurmus
f2b9129d21
gnu: r-insight: Update to 0.14.0.
* gnu/packages/cran.scm (r-insight): Update to 0.14.0.
2021-05-20 10:58:15 +02:00
Ricardo Wurmus
ada22a989c
gnu: r-overlap: Update to 0.3.4.
* gnu/packages/cran.scm (r-overlap): Update to 0.3.4.
2021-05-20 10:58:15 +02:00
Ricardo Wurmus
033977f7fb
gnu: r-arules: Update to 1.6-8.
* gnu/packages/cran.scm (r-arules): Update to 1.6-8.
2021-05-20 10:58:15 +02:00
Ricardo Wurmus
5072b7b42a
gnu: r-cubature: Update to 2.0.4.2.
* gnu/packages/cran.scm (r-cubature): Update to 2.0.4.2.
2021-05-20 10:58:15 +02:00
Ricardo Wurmus
1bccefef85
gnu: r-pillar: Update to 1.6.1.
* gnu/packages/cran.scm (r-pillar): Update to 1.6.1.
2021-05-20 10:58:15 +02:00
Ricardo Wurmus
c479174108
gnu: r-xfun: Update to 0.23.
* gnu/packages/cran.scm (r-xfun): Update to 0.23.
2021-05-20 10:58:15 +02:00
Ricardo Wurmus
48024ed634
gnu: r-corrplot: Update to 0.88.
* gnu/packages/cran.scm (r-corrplot): Update to 0.88.
[native-inputs]: Add r-knitr.
2021-05-20 10:58:15 +02:00
Ricardo Wurmus
31d01cf1e1
gnu: r-inline: Update to 0.3.18.
* gnu/packages/cran.scm (r-inline): Update to 0.3.18.
2021-05-20 10:58:15 +02:00