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Author SHA1 Message Date
Tobias Geerinckx-Rice
eeecbe09cc
gnu: perl-dbd-mysql: Update to 4.048. 
* gnu/packages/databases.scm (perl-dbd-mysql): Update to 4.048.
 2018-09-21 10:25:31 +02:00
Danny Milosavljevic
e0b07ccc1a
gnu: rust: Work around mtime bug in rust build helpers. 
* gnu/packages/rust.scm (rust-1.20)[arguments]<#:phases>[fix-mtime-bug]:
Delete.
[reset-timestamps-after-changes]: Modify.
(rust-1.24): Don't delete "fix-mtime-bug" since now it doesn't ever
get created.
 2018-09-21 01:35:00 +02:00
Danny Milosavljevic
1bfaae25fa
gnu: rust@1.20.0: Fix tests. 
* gnu/packages/rust.scm (rust-1.23)[arguments]<#:phases>
[patch-cargo-tests, ignore-glibc-2.27-incompatible-test,fix-mtime-bug]: Move
to...
(rust-1.20): ... here.
 2018-09-21 01:31:10 +02:00
Mark H Weaver
83e8b1d794
gnu: linux-libre: Update to 4.18.9. 
* gnu/packages/linux.scm (%linux-libre-version): Update to 4.18.9.
(%linux-libre-hash): Update hash.
 2018-09-20 18:04:56 -04:00
Mark H Weaver
c57a2a12b1
gnu: linux-libre@4.14: Update to 4.14.71. 
* gnu/packages/linux.scm (%linux-libre-4.14-version): Update to 4.14.71.
(%linux-libre-4.14-hash): Update hash.
 2018-09-20 18:04:48 -04:00
Mark H Weaver
41d6afb266
gnu: linux-libre@4.9: Update to 4.9.128. 
* gnu/packages/linux.scm (linux-libre-4.9): Update to 4.9.128.
 2018-09-20 18:04:42 -04:00
Mark H Weaver
c6ede267e6
gnu: linux-libre@4.4: Update to 4.4.157. 
* gnu/packages/linux.scm (linux-libre-4.4): Update to 4.4.157.
 2018-09-20 18:04:35 -04:00
fis trivial
ea2364621a
gnu: qbittorrent: Update to 4.1.3. 
* gnu/packages/bittorrent.scm (qbittorrent): Update to 4.1.3.
[inputs]: Use python-wrapper instead of python.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2018-09-20 15:31:17 -04:00
fis trivial
f5c10a94ef
gnu: gprolog: Update to 1.4.5. 
* gnu/packages/gprolog.scm (gprolog): Update to 1.4.5.
[source]: Add an alternate source URL.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2018-09-20 15:27:43 -04:00
Ricardo Wurmus
89ee8a6edf
gnu: rsem: Update to 1.3.1. 
* gnu/packages/bioinformatics.scm (rsem): Update to 1.3.1.
[source]: Fetch from git; remove patch; delete bundled samtools.
[arguments]: Pass make flags; adjust phases.
[inputs]: Remove ncurses and samtools-0.1; add htslib-1.3.
* gnu/packages/patches/rsem-makefile.patch: Remove patch.
* gnu/local.mk (dist_patch_DATA): Remove it.
 2018-09-20 17:55:26 +02:00
Ricardo Wurmus
a235ea4f30
gnu: ghc-pandoc-citeproc: Update to 0.14.3.1. 
* gnu/packages/haskell.scm (ghc-pandoc-citeproc): Update to 0.14.3.1.
 2018-09-20 17:20:07 +02:00
Ricardo Wurmus
e30397dddb
gnu: ghc-xml-conduit: Update to 1.8.0.1. 
* gnu/packages/haskell.scm (ghc-xml-conduit): Update to 1.8.0.1.
[inputs]: Add ghc-doctest.
 2018-09-20 17:20:02 +02:00
Ricardo Wurmus
391fc11f0e
gnu: python2-scikit-learn: Fix check phase. 
* gnu/packages/machine-learning.scm (python2-scikit-learn)[arguments]:
Override check phase to disable broken tests and pass environment variables.
 2018-09-20 15:56:59 +02:00
Ricardo Wurmus
26358ac5ab
gnu: Add r-parmigene. 
* gnu/packages/cran.scm (r-parmigene): New variable.
 2018-09-20 15:56:30 +02:00
Marius Bakke
3e12df7d71
gnu: Add emacs-dired-sidebar. 
* gnu/packages/emacs.scm (emacs-dired-sidebar): New public variable.
 2018-09-20 13:29:29 +02:00
Marius Bakke
166b2c970e
gnu: eolie: Update home page. 
* gnu/packages/gnome.scm (eolie)[home-page]: Set to wiki.gnome.org/Apps/Eolie.
 2018-09-20 13:29:29 +02:00
Arun Isaac
9926b8f809
gnu: services: Add iptables service. 
* gnu/services/networking.scm (<iptables-configuration>): New record type.
(iptables-service-type): New variable.
* gnu/tests/networking.scm (run-iptables-test): New procedure.
(%test-iptables): New variable.
* doc/guix.texi (Networking Services): Document it.
 2018-09-20 13:09:55 +05:30
Tobias Geerinckx-Rice
3e63a83c0f
gnu: u-boot: Use HTTPS home page. 
* gnu/packages/bootloaders.scm (u-boot)[home-page]: Use HTTPS.
 2018-09-20 04:50:34 +02:00
Tobias Geerinckx-Rice
84c7fbfd6d
gnu: ccid: Update to 1.4.30. 
* gnu/packages/security-token.scm (ccid): Update to 1.4.30.
 2018-09-20 04:50:34 +02:00
Tobias Geerinckx-Rice
4eb161962f
gnu: opusfile: Update to 0.11. 
* gnu/packages/xiph.scm (opusfile): Update to 0.11.
 2018-09-20 04:50:33 +02:00
Tobias Geerinckx-Rice
e61c2991e4
Use INVOKE in (gnu packages xdisorg). 
* gnu/packages/xdisorg.scm (scrot, unclutter, xautolock, nxbelld)
[arguments]: Use INVOKE.
 2018-09-20 04:17:04 +02:00
Tobias Geerinckx-Rice
2385ecb224
Use INVOKE in (gnu packages shells). 
* gnu/packages/shells.scm (mksh)[arguments]: Use INVOKE...
(scsh)[arguments]: ...and also return #t from all phases.
 2018-09-20 04:17:04 +02:00
Tobias Geerinckx-Rice
9923d5a40f
gnu: Use INVOKE & return #t from Ruby package phases. 
* gnu/packages/maths.scm (ruby-asciimath)[arguments]: Return #t from
all phases.
* gnu/packages/rails.scm (ruby-debug-inspector)[arguments]: Substitute
INVOKE for SYSTEM*.
* gnu/packages/ruby.scm (ruby-permutation, ruby-blankslate)
(ruby-minitest-pretty-diff, ruby-guard, ruby-rb-inotify, ruby-tins)
(ruby-gem-hadar, ruby-term-ansicolor, ruby-json-pure)
(ruby-activesupport, ruby-redcloth, ruby-netrc, ruby-unf-ext, ruby-yard)
(ruby-turn, ruby-sqlite3, ruby-shoulda-context, ruby-shoulda-matchers)
(ruby-shoulda, ruby-httpclient, ruby-ansi, ruby-bio-commandeer)
(ruby-rubytest, ruby-brass, ruby-qed, ruby-ae, ruby-lemon, ruby-hashery)
(ruby-rc4, ruby-concurrent)[arguments]: Likewise.
 2018-09-20 04:17:04 +02:00
Tobias Geerinckx-Rice
4f66ae2899
gnu: ruby-heredoc-unindent: Fix typo in description. 
* gnu/packages/ruby.scm (ruby-heredoc-unindent)[description]: Fix typo.
 2018-09-20 04:17:03 +02:00
Tobias Geerinckx-Rice
7616d75fd6
Use INVOKE in (gnu packages telephony). 
* gnu/packages/telephony.scm (libiax2, mumble)[arguments]: Use INVOKE.
 2018-09-20 04:17:03 +02:00
Tobias Geerinckx-Rice
e564d33ce8
gnu: gourmet: Use HTTPS home page. 
* gnu/packages/nutrition.scm (gourmet)[home-page]: Use HTTPS.
 2018-09-20 04:17:03 +02:00
Tobias Geerinckx-Rice
29a000b602
gnu: sg3-utils: Update to 1.44. 
* gnu/packages/scsi.scm (sg3-utils): Update to 1.44.
 2018-09-20 04:17:02 +02:00
Leo Famulari
e266043e67
gnu: shotwell: Update to 0.28.4. 
* gnu/packages/gnome.scm (shotwell): Update to 0.28.4.
 2018-09-19 17:31:49 -04:00
Leo Famulari
508d5c5fa8
gnu: OpenSC: Update to 0.19.0 [security fixes]. 
Fixes CVE-2018-{16391,16392,16393,16418,16419,16420,16421,16422,16423,16424,
16425,16426,16427}.

* gnu/packages/security-token.scm (opensc): Update to 0.19.0.
 2018-09-19 15:08:00 -04:00
Andy Patterson
1d98b44ea6
gnu: sbcl-slynk: Fix the build. 
* gnu/packages/lisp.scm (sbcl-slynk-boot0): Update to commit
cbf84c36c4eca8b032e3fd16177a7bc02df3ec4c.
[origin]<snippet>: Replace slynk/util references with the built system name
slynk-util. Remove compile-time invocations of slynk-require.
(sbcl-slynk-util): Inherit from sbcl-slynk-boot0.
[inputs]: Add sbcl-slynk-boot0.
[arguments]: Set an appropriate asd-file and asd-system-name.
(sbcl-slynk-arglists)[arguments]: Set an appropriate asdf-system-name.
(sbcl-slynk-fancy-inspector)[arguments]: Likewise.
(sbcl-slynk-package-fu)[arguments]: Likewise.
(sbcl-slynk-mrepl)[arguments]: Likewise.
(sbcl-slynk-trace-dialog)[arguments]: Likewise.
(sbcl-slynk-profiler)[arguments]: Likewise.
(sbcl-slynk-indentation)[arguments]: Likewise.
(sbcl-slynk-retro)[arguments]: Likewise.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2018-09-19 18:25:28 +02:00
Ludovic Courtès
241358dc94
services: networking: Remove unbound variable reference in 'stop'. 
* gnu/services/base.scm (static-networking-shepherd-service): Remove
spurious ":" in 'stop' method inadvertently introduced in commit
c9436025a9.
 2018-09-19 18:25:28 +02:00
Ludovic Courtès
7fd3082522
services: udev: Simplify 'start' method. 
* gnu/services/base.scm (udev-shepherd-service)[start](find): Remove.
(udev): Hardwire the eudev file name.
Use 'fork+exec-command' instead of 'primitive-fork' and 'exec-command'.
 2018-09-19 18:25:27 +02:00
Marius Bakke
4d679255da
gnu: glm: Update to 0.9.9.2. 
* gnu/packages/maths.scm (glm): Update to 0.9.9.2.
 2018-09-19 15:20:21 +02:00
Marius Bakke
f6ae59c2e0
gnu: feh: Update to 2.28. 
* gnu/packages/image-viewers.scm (feh): Update to 2.28.
 2018-09-19 15:20:21 +02:00
Marius Bakke
f03c4ec649
gnu: arpack-ng: Update to 3.6.3. 
* gnu/packages/maths.scm (arpack-ng): Update to 3.6.3.
 2018-09-19 15:20:21 +02:00
Marius Bakke
622ef2b90a
gnu: arpack-ng: Don't use unstable tarball. 
* gnu/packages/maths.scm (arpack-ng)[source]: Use GIT-FETCH.
 2018-09-19 15:20:21 +02:00
Marius Bakke
c5c1e410cf
gnu: Reinstate xf86-video-ast. 
* gnu/packages/patches/xf86-video-ast-remove-mibstore.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
* gnu/packages/xorg.scm (xf86-video-ast): New public variable.
 2018-09-19 15:20:21 +02:00
Danny Milosavljevic
6c1a658414
gnu: rust@1.19.0: Install libtest. 
* gnu/packages/rust.scm (rust-1.19)[arguments]<#:phases>[build]: Build
libtest.
 2018-09-19 14:41:01 +02:00
Danny Milosavljevic
4a90fcf9e7
gnu: mrustc: Enable tests. 
* gnu/packages/rust.scm (mrustc)[arguments]: Add #:test-target.
<#:phases>[install]: Don't install test output.
 2018-09-19 14:41:01 +02:00
Pierre Neidhardt
1cfcb841ed
gnu: git-credential-netrc: Add Git.pm to PERL5LIB. 
* gnu/packages/version-control.scm (git)[credential-netrc]: Add Git.pm to PERL5LIB.
 2018-09-19 09:07:12 +02:00
Ludovic Courtès
0058888c7e
gnu: Add guile-debbugs. 
* gnu/packages/guile.scm (guile-debbugs): New variable.
 2018-09-18 23:23:44 +02:00
Leo Famulari
32b3611375
gnu: Go 1.10: Update to 1.10.4. 
* gnu/packages/golang.scm (go-1.10): Update to 1.10.4.
 2018-09-18 15:30:03 -04:00
Tobias Geerinckx-Rice
56c180750c
gnu: busybox: Update to 1.29.3. 
* gnu/packages/busybox.scm (busybox): Update to 1.29.3.
 2018-09-18 14:18:43 +02:00
Tobias Geerinckx-Rice
d99051715a
gnu: xorriso: Update to 1.5.0. 
* gnu/packages/cdrom.scm (xorriso): Update to 1.5.0.
 2018-09-18 13:50:32 +02:00
Tobias Geerinckx-Rice
8190578fa0
gnu: libisofs: Update to 1.5.0. 
* gnu/packages/cdrom.scm (libisofs): Update to 1.5.0.
 2018-09-18 13:50:32 +02:00
Tobias Geerinckx-Rice
4999f45ea9
gnu: libburn: Update to 1.5.0. 
* gnu/packages/cdrom.scm (libburn): Update to 1.5.0.
 2018-09-18 13:50:32 +02:00
Tobias Geerinckx-Rice
487cf5aaf6
gnu: rc: Simplify. 
* gnu/packages/shells.scm (rc)[source]: Replace magic commit ID with the
tagged release. Use GIT-FILE-NAME.
[arguments]: Remove 'autoreconf' phase (relying on Guix's built-in
'bootstrap' phase instead) and adjust the ordering of 'patch-trip.rc'
accordingly.
 2018-09-18 13:50:09 +02:00
Tobias Geerinckx-Rice
7c0ed27a8b
gnu: ncmpc: Update to 0.30. 
* gnu/packages/mpd.scm (ncmpc): Update to 0.30.
[arguments]: Add 'expand-C++-include-path' phase.
[inputs]: Add gcc-8.
 2018-09-18 13:50:09 +02:00
Tobias Geerinckx-Rice
8ecd843df5
gnu: exfat-utils: Update to 1.3.0. 
* gnu/packages/mtools.scm (exfat-utils): Update to 1.3.0.
 2018-09-18 13:50:09 +02:00
Tobias Geerinckx-Rice
b22c44f1ea
gnu: cinnamon-desktop: Use Guix's built-in bootstrap phase. 
* gnu/packages/cinnamon.scm (cinnamon-desktop)[arguments]: Remove
'autoconf' phase. Add 'skip-premature-configure' phase.
 2018-09-18 13:49:23 +02:00
Tobias Geerinckx-Rice
0edc232be9
gnu: gourmet: Use INVOKE. 
* gnu/packages/nutrition.scm (gourmet)[arguments]: Substitute INVOKE for
SYSTEM*.
 2018-09-18 13:49:23 +02:00
Ludovic Courtès
56c240ba8c
gnu: Add confusion-mdl. 
* gnu/packages/lisp.scm (confusion-mdl): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2018-09-17 23:19:45 +02:00
Tobias Geerinckx-Rice
d68aa41573
gnu: enlightenment: Update to 0.22.4. 
* gnu/packages/enlightenment.scm (enlightenment): Update to 0.22.4.
 2018-09-17 12:50:21 +02:00
Tobias Geerinckx-Rice
ee127549a3
gnu: efl: Update to 1.21.1. 
* gnu/packages/enlightenment.scm (efl): Update to 1.21.1.
 2018-09-17 12:50:21 +02:00
Tobias Geerinckx-Rice
f6a4d57e06
gnu: foo2zjs: Update to 20180910. 
* gnu/packages/cups.scm (foo2zjs): Update to 20180910.
 2018-09-17 12:50:21 +02:00
Tobias Geerinckx-Rice
a09a21190f
gnu: libiptcdata: Mark up description. 
* gnu/packages/image.scm (libiptcdata)[description]: Use @dfn{}.
 2018-09-17 12:50:20 +02:00
Tobias Geerinckx-Rice
99d386a71f
gnu: powwow: Update to 1.2.18. 
* gnu/packages/games.scm (powwow): Update to 1.2.18.
 2018-09-17 12:50:20 +02:00
Tobias Geerinckx-Rice
36aff81aa3
gnu: powwow: Use HTTPS home page. 
* gnu/packages/games.scm (powwow)[home-page]: Use HTTPS.
 2018-09-17 12:50:20 +02:00
Tobias Geerinckx-Rice
956bcc8ed2
gnu: python-dirsync: Update to 2.2.3. 
* gnu/packages/python.scm (python-dirsync): Update to 2.2.3.
[native-inputs]: Remove unzip.
 2018-09-17 12:50:20 +02:00
Leo Famulari
4fed15fba3
gnu: mbedtls-apache: Update to 2.7.6. 
* gnu/packages/tls.scm (mbedtls-apache): Update to 2.7.6.
 2018-09-17 01:14:15 -04:00
Mark H Weaver
ad99df3990
gnu: linux-libre: Update to 4.18.8. 
* gnu/packages/linux.scm (%linux-libre-version): Update to 4.18.8.
(%linux-libre-hash): Update hash.
 2018-09-16 19:13:42 -04:00
Mark H Weaver
c333c8b6f1
gnu: linux-libre@4.14: Update to 4.14.70. 
* gnu/packages/linux.scm (%linux-libre-4.14-version): Update to 4.14.70.
(%linux-libre-4.14-hash): Update hash.
 2018-09-16 19:12:53 -04:00
Mark H Weaver
bf9d141a65
gnu: linux-libre@4.9: Update to 4.9.127. 
* gnu/packages/linux.scm (linux-libre-4.9): Update to 4.9.127.
 2018-09-16 19:12:10 -04:00
Mark H Weaver
b55d75f133
gnu: linux-libre@4.4: Update to 4.4.156. 
* gnu/packages/linux.scm (linux-libre-4.4): Update to 4.4.156.
 2018-09-16 19:11:33 -04:00
Tobias Geerinckx-Rice
31fdfc0cdd
gnu: dmidecode: Update to 3.2. 
* gnu/packages/admin.scm (dmidecode): Update to 3.2.
 2018-09-16 23:44:46 +02:00
Ben Woodcroft
5edef88b88
gnu: Add ruby-multi-test. 
* gnu/packages/ruby.scm (ruby-multi-test): New variable.

Signed-off-by: Christopher Baines <mail@cbaines.net>
 2018-09-16 18:29:45 +01:00
Ben Woodcroft
1b6f5475a1
gnu: Enable tests for ruby-multi-json. 
* gnu/packages/ruby.scm (ruby-multi-json)[version]: Update to 1.13.1.
[source]: Switch to GitHub, so that the tests can be run.
[arguments]: Enable running the tests, and add a patch to fix an issue running
the tests.
[native-inputs]: Add native-inputs required for running the tests.
[home-page]: Use HTTPS.

Signed-off-by: Christopher Baines <mail@cbaines.net>
 2018-09-16 18:29:45 +01:00
Ben Woodcroft
ed4b6b1840
gnu: Add ruby-oj. 
* gnu/packages/ruby.scm (ruby-oj): New variable.

Signed-off-by: Christopher Baines <mail@cbaines.net>
 2018-09-16 18:29:45 +01:00
Ben Woodcroft
2db0f9c82d
gnu: Add ruby-yajl-ruby. 
* gnu/packages/ruby.scm (ruby-yajl-ruby): New variable.

Signed-off-by: Christopher Baines <mail@cbaines.net>
 2018-09-16 18:29:45 +01:00
Roel Janssen
cbb1b16865
admin: python-pyudev: Add dependency on python-six. 
* gnu/packages/admin.scm (python-pyudev): Add dependency on python-six.
 2018-09-15 21:26:50 +02:00
Julien Lepiller
636579210f
gnu: php: Update to 7.2.10. 
* gnu/packages/php.scm (php): Update to 7.2.10.
 2018-09-15 21:06:08 +02:00
Rutger Helling
e8079dd9e4
gnu: wine-staging: Update to 3.16. 
* gnu/packages/wine.scm (wine-staging): Update to 3.16.
 2018-09-15 15:09:01 +02:00
Rutger Helling
b947c614df
gnu: wine-staging-patchset-data: Update to 3.16. 
* gnu/packages/wine.scm (wine-staging-patchset-data): Update to 3.16.
 2018-09-15 15:09:01 +02:00
Rutger Helling
85a349787b
gnu: wine: Update to 3.0.3. 
* gnu/packages/wine.scm (wine): Update to 3.0.3.
 2018-09-15 15:09:00 +02:00
Tobias Geerinckx-Rice
4be83af427
gnu: gambit-c: Update to 4.9.0. 
The tests makefile still contains the offending lines, but I was unable
to reproduce the failure across 3 different machines.

* gnu/packages/scheme.scm (gambit-c): Update to 4.9.0.
[arguments]: Remove 'fix-tests' phase.
 2018-09-15 12:15:28 +02:00
Tobias Geerinckx-Rice
4e9832dd38
gnu: gambit-c: Update home page. 
* gnu/packages/scheme.scm (gambit-c)[home-page]: Update.
 2018-09-15 12:15:05 +02:00
Maxim Cournoyer
511f3be695
gnu: Add python-user-agents. 
* gnu/packages/python.scm (python-user-agents, python2-user-agents): New
variables.

Signed-off-by: 宋文武 <iyzsong@member.fsf.org>
 2018-09-15 12:19:06 +08:00
Maxim Cournoyer
2ee67781ff
gnu: Add python-ua-parser. 
* gnu/packages/python.scm (python-ua-parser, python2-ua-parser): New variables.

Signed-off-by: 宋文武 <iyzsong@member.fsf.org>
 2018-09-15 12:19:06 +08:00
Maxim Cournoyer
935d5ceb9b
gnu: Add python-pycountry. 
* gnu/packages/python.scm (python-pycountry, python2-pycountry): New variables.

Signed-off-by: 宋文武 <iyzsong@member.fsf.org>
 2018-09-15 12:19:06 +08:00
Tobias Geerinckx-Rice
021b42f5e7
gnu: zsh: Update to 5.6.2. 
* gnu/packages/shells.scm (zsh): Update to 5.6.2.
 2018-09-15 05:17:51 +02:00
Tobias Geerinckx-Rice
81fb037f5a
gnu: libetpan: Use HTTPS home page. 
* gnu/packages/mail.scm (libetpan)[home-page]: Use HTTPS.
 2018-09-15 05:17:50 +02:00
Tobias Geerinckx-Rice
483be9bda6
gnu: ocaml-ounit: Update to 2.0.8. 
* gnu/packages/ocaml.scm (ocaml-ounit): Update to 2.0.8.
 2018-09-15 05:17:50 +02:00
Tobias Geerinckx-Rice
3319817174
gnu: pybind11: Update to 2.2.4. 
* gnu/packages/python.scm (pybind11): Update to 2.2.4.
 2018-09-15 05:17:50 +02:00
Tobias Geerinckx-Rice
5c34d97187
gnu: pybind11: Don't use unstable tarball. 
* gnu/packages/python.scm (pybind11)[source]: Use GIT-FETCH and
GIT-FILE-NAME.
 2018-09-15 05:17:50 +02:00
Maxim Cournoyer
61853b7447
gnu: libjpeg: Improve description. 
* gnu/packages/image.scm (libjpeg)[description]: Add the list of the programs
it provides.

Signed-off-by: 宋文武 <iyzsong@member.fsf.org>
 2018-09-15 10:49:50 +08:00
Tobias Geerinckx-Rice
25bc6370a4
gnu: snakemake: Update to 5.2.4. 
* gnu/packages/python.scm (snakemake): Update to 5.2.4.
[propagated-inputs]: Add python-gitpython.
 2018-09-15 03:38:31 +02:00
Tobias Geerinckx-Rice
bbe2a94799
gnu: libsigrokdecode: Update to 0.5.2. 
* gnu/packages/electronics.scm (libsigrokdecode): Update to 0.5.2.
 2018-09-15 03:38:31 +02:00
Tobias Geerinckx-Rice
9f1b186afc
gnu: libetpan: Update to 1.9.1. 
* gnu/packages/mail.scm (libetpan): Update to 1.9.1.
 2018-09-15 03:38:31 +02:00
Tobias Geerinckx-Rice
aae96f8fac
gnu: libetpan: Don't use unstable tarball. 
* gnu/packages/mail.scm (libetpan)[source]: Use GIT-FETCH and
GIT-FILE-NAME.
 2018-09-15 03:38:31 +02:00
Tobias Geerinckx-Rice
f9fe94c1f6
gnu: emacs-magit-popup: Don't use unstable tarball. 
* gnu/packages/emacs.scm (emacs-magit-popup)[source]: Use GIT-FETCH and
GIT-FILE-NAME.
 2018-09-15 03:38:30 +02:00
Tobias Geerinckx-Rice
e1bf455cee
gnu: emacs-magit-popup: Update to 2.12.4. 
* gnu/packages/emacs.scm (emacs-magit-popup): Update to 2.12.4.
 2018-09-15 03:38:30 +02:00
Tobias Geerinckx-Rice
49c941b43b
gnu: libmwaw: Update to 0.3.14. 
* gnu/packages/libreoffice.scm (libmwaw): Update to 0.3.14.
 2018-09-15 03:38:30 +02:00
Tobias Geerinckx-Rice
002d73a01f
gnu: libwps: Update to 0.4.10. 
* gnu/packages/libreoffice.scm (libwps): Update to 0.4.10.
 2018-09-15 03:38:30 +02:00
Tobias Geerinckx-Rice
c924fe38dc
gnu: umoci: Update to 0.4.2. 
* gnu/packages/virtualization.scm (umoci): Update to 0.4.2.
 2018-09-15 03:36:36 +02:00
Tobias Geerinckx-Rice
56f3b85bd3
gnu: python-iso8601: Update to 0.1.12. 
* gnu/packages/time.scm (python-iso8601): Update to 0.1.12.
 2018-09-15 03:36:36 +02:00
Tobias Geerinckx-Rice
ed017a78be
gnu: coq: Update to 8.8.1. 
* gnu/packages/ocaml.scm (coq): Update to 8.8.1.
 2018-09-15 03:36:36 +02:00
Tobias Geerinckx-Rice
1d7cc6841e
gnu: coq: INVOKE. 
* gnu/packages/ocaml.scm (coq)[arguments]: Substitute INVOKE for
SYSTEM*.
 2018-09-15 03:36:35 +02:00
Leo Famulari
9e9e5d5a26
gnu: OpenSSL 1.1: Update to 1.1.1. 
* gnu/packages/tls.scm (openssl-next): Update to 1.1.1.
[arguments]: Patch a `/usr/bin/env` invocation in the 'config' script.
Adjust the documentation output.
* gnu/packages/patches/openssl-1.1.0-c-rehash-in.patch: Rename and ...
* gnu/packages/patches/openssl-1.1-c-rehash-in.patch: ... adjust patch.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
 2018-09-14 16:51:49 -04:00
Danny Milosavljevic
e830c9d0b0
gnu: Rename "banana-pi" to "bananapi". 
* gnu/bootloader/u-boot.scm (u-boot-banana-pi-m2-ultra-bootloader): Rename
to...
(u-boot-bananapi-m2-ultra-bootloader): ...this.
* gnu/packages/bootloaders.scm (u-boot-banana-pi-m2-ultra): Rename to...
(u-boot-bananapi-m2-ultra): ...this.
* gnu/system/install.scm (banana-pi-m2-ultra-installation-os): Rename to...
(bananapi-m2-ultra-installation-os): ...this.
 2018-09-14 21:31:24 +02:00
Ricardo Wurmus
7a20877a18
gnu: python-llvmlite: Remove obsolete patch. 
* gnu/packages/llvm.scm (python-llvmlite)[inputs]: Remove patch that is
obsolete since the upgrade to LLVM 6.0.1.
 2018-09-14 15:12:03 +02:00
Eric Brown
daa6036fda
gnu: Add openblas-ilp64. 
* gnu/packages/maths.scm (openblas-ilp64): New variable.

Co-authored-by: Ludovic Courtès <ludovic.courtes@inria.fr>
 2018-09-14 11:23:07 +02:00
Ricardo Wurmus
1dd153b3aa
gnu: Add python-hic2cool. 
* gnu/packages/bioinformatics.scm (python-hic2cool): New variable.
 2018-09-14 09:15:49 +02:00
pimi
03c95f0414
gnu: Add r-abps. 
* gnu/packages/cran.scm (r-abps): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2018-09-14 07:46:19 +02:00
pimi
016cabf7be
gnu: Add r-abodoutlier. 
* gnu/packages/cran.scm (r-abodoutlier): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2018-09-14 07:46:19 +02:00
Danny Milosavljevic
317b139c5d
gnu: rust: Update to 1.27.2. 
* gnu/packages/rust.scm (rust): Update to 1.27.2.
 2018-09-13 22:37:55 +02:00
pimi
b6afe7b7f5
gnu: Add r-abnormality. 
* gnu/packages/cran.scm (r-abnormality): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2018-09-13 22:16:01 +02:00
Tobias Geerinckx-Rice
f0314f65df
gnu: Add perl-devel-checklib. 
* gnu/packages/perl.scm (perl-devel-checklib): New public variable.
 2018-09-13 19:53:08 +02:00
Tobias Geerinckx-Rice
7ec4f648e5
gnu: sg3_utils: Mark up description. 
* gnu/packages/scsi.scm (sg3_utils)[description]: Use @dfn{}.
Wrap commands in @command{} rather than @code{}, and @itemize them.
 2018-09-13 19:53:08 +02:00
Tobias Geerinckx-Rice
581b6f5e96
gnu: sudo: Update to 1.8.25p1. 
* gnu/packages/admin.scm (sudo): Update to 1.8.25p1.
 2018-09-13 19:53:07 +02:00
Tobias Geerinckx-Rice
0b0b43ed7a
gnu: youtube-viewer: Update to 3.4.1. 
* gnu/packages/video.scm (youtube-viewer): Update to 3.4.1.
 2018-09-13 19:53:07 +02:00
Tobias Geerinckx-Rice
6be445785a
gnu: youtube-viewer: Don't use unstable tarball. 
* gnu/packages/video.scm (youtube-viewer)[source]: Use GIT-FETCH and
GIT-FILE-NAME.
 2018-09-13 19:53:07 +02:00
Leo Famulari
7d1cc61293
Revert "gnu: libinput: Update to 1.12.0." 
Libinput-minimal has a lot of dependent packages, and this isn't reported by
`guix refresh --list-dependent`. We'll save this commit for another time.

This reverts commit 38dc3d6f17.
 2018-09-13 13:28:10 -04:00
pimi
ebb3cdb1ea
gnu: Add r-abjutils. 
* gnu/packages/cran.scm (r-abjutils): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2018-09-13 19:18:47 +02:00
pimi
1efcd0f1ea
gnu: Add r-abhgenotyper. 
* gnu/packages/cran.scm (r-abhgenotyper): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2018-09-13 19:13:43 +02:00
Manuel Graf
ae72b8f55b
gnu: Add ClusterShell. 
* gnu/packages/ssh.scm (clustershell): New variable.

Co-authored-by: Ludovic Courtès <ludovic.courtes@inria.fr>
 2018-09-13 19:12:25 +02:00
Leo Famulari
38dc3d6f17
gnu: libinput: Update to 1.12.0. 
* gnu/packages/freedesktop.scm (libinput): Update to 1.12.0.
 2018-09-13 13:08:24 -04:00
pimi
ef26400b66
gnu: Add r-abf2. 
gnu/packages/cran.scm (r-abf2): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2018-09-13 19:05:35 +02:00
Efraim Flashner
f21967a44b
gnu: retroarch: Fix building on armhf-linux. 
* gnu/packages/emulators.scm (retroarch)[arguments]: Add custom flags
when building for armhf-linux.
 2018-09-13 18:40:32 +03:00
Efraim Flashner
fade67ab75
gnu: retroarch: Use shared zlib. 
* gnu/packages/emulators.scm (retroarch)[arguments]: In custom
'configure phase, use our zlib instead of vendor's zlib.
 2018-09-13 18:40:30 +03:00
Danny Milosavljevic
060366f6b3
gnu: rust@1.23.0: Inherit outputs. 
* gnu/packages/rust.scm (rust-1.23)[outputs]: Inherit.
 2018-09-13 17:19:04 +02:00
Danny Milosavljevic
b78fe27b31
gnu: rust@1.25.0: Disable pedantic test. 
* gnu/packages/rust.scm (rust-1.25)[arguments]<#:phases>
[disable-nil-enum-test]: New phase.
 2018-09-13 17:17:15 +02:00
Danny Milosavljevic
6fe73b487b
gnu: rust: Accept more detailed gdb responses. 
* gnu/packages/patches/rust-1.25-accept-more-detailed-gdb-lines.patch: New
file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/rust.scm (rust-1.25): Use it.
(rust-1.26): Use it.
(rust): Use it.
 2018-09-13 17:17:15 +02:00
pimi
3cadd3ce93
gnu: Add r-abe. 
gnu/packages/cran.scm (r-abe): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2018-09-13 15:21:40 +02:00
pimi
d1ca3d7297
gnu: Add r-svdialogs. 
gnu/packages/cran.scm (r-svdialogs): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2018-09-13 15:07:45 +02:00
宋文武
26700caed9
gnu: racket: Fix incompatibility with libedit. 
The former patching made racket detecting libedit as the old 2.11 version,
which leads to failure:
<https://lists.gnu.org/archive/html/help-guix/2018-09/msg00027.html>.

* gnu/packages/scheme.scm (racket)[arguments]: Patch the 'ffi-lib' call of
libedit using 'PLT_READLINE_LIB'.
 2018-09-13 20:20:41 +08:00
Danny Milosavljevic
73dc7834de
gnu: rust@1.20.0: Replace "default-ar" by "ar". 
* gnu/packages/rust.scm (rust-1.20)[arguments]<#:phases>[configure]: Replace
"default-ar" by "ar".
 2018-09-13 10:10:49 +02:00
Danny Milosavljevic
1ab3e1dd98
gnu: Add rust@1.22.1. 
* gnu/packages/rust.scm (rust-1.22): New variable.
 2018-09-13 10:10:49 +02:00
Danny Milosavljevic
05ebff92bd
gnu: Add rust@1.21.0. 
* gnu/packages/rust.scm (rust-1.21): New variable.
 2018-09-13 10:10:49 +02:00
Danny Milosavljevic
e69b1a7c6e
gnu: rust-bootstrap: Clean up comments. 
* gnu/packages/rust.scm (rust-bootstrap): Clean up comments.
 2018-09-13 10:10:49 +02:00
Danny Milosavljevic
bfdc0e4d45
gnu: rust: Move "cc" from rust-bootstrap to rust proper. 
* gnu/packages/rust.scm (rust-bootstrap)[arguments]<#:phases>[install]:
Delete "cc".
(rust-1.23)[arguments]<#:phases>: Delete "provide-cc" deletion.
 2018-09-13 10:10:49 +02:00
Danny Milosavljevic
333c0ca966
gnu: rust@1.23.0: Use rust@1.20.0 as template. 
* gnu/packages/rust.scm (rust-1.23)[inherit]: Use rust-1.20.
[arguments]<#:phases>: Delete "patch-cargo-tomls" phase deletion.
Add "provide-cc" phase deletion.
Add "configure-archiver" phase deletion.
[configure]: Inherit phase.
[reset-timestamps-after-changes]: Inherit phase.
[build]: Inherit phase.
[check]: Inherit phase.
[install]: Inherit phase.
[wrap-rustc]: Inherit phase.
 2018-09-13 10:10:48 +02:00
Maxim Cournoyer
f309671c28
gnu: Add emacs-org-reveal. 
* gnu/packages/emacs.scm (emacs-org-reveal): New variable.
 2018-09-12 22:48:04 -04:00
Maxim Cournoyer
82baeea297
gnu: Add emacs-elpy. 
* gnu/packages/emacs.scm (emacs-elpy): New variable.
 2018-09-12 22:16:25 -04:00
Maxim Cournoyer
dcc31d7f41
gnu: Add emacs-highlight-indentation. 
* gnu/packages/emacs.scm (emacs-highlight-indentation): New variable.
 2018-09-12 22:16:25 -04:00
Maxim Cournoyer
87e9fb5753
gnu: Add emacs-pyvenv. 
* gnu/packages/emacs.scm (emacs-pyvenv): New variable.
 2018-09-12 22:16:24 -04:00
Maxim Cournoyer
2c6ff3a2bc
gnu: Add emacs-find-file-in-project. 
* gnu/packages/emacs.scm (emacs-find-file-in-project): New variable.
 2018-09-12 22:16:24 -04:00
Maxim Cournoyer
563f151bd4
gnu: Add emacs-mocker. 
* gnu/packages/emacs.scm (emacs-mocker): New variable.
 2018-09-12 22:16:24 -04:00
Maxim Cournoyer
aaf10fa7d8
gnu: Add emacs-el-x. 
* gnu/packages/emacs.scm (emacs-el-x): New variable.
 2018-09-12 22:16:23 -04:00
Maxim Cournoyer
8795ce8673
gnu: Add python-black. 
* gnu/packages/python.scm (python-black): New variable.
 2018-09-12 22:16:23 -04:00
Maxim Cournoyer
7e846d07e8
gnu: Add python-toml. 
* gnu/packages/python.scm (python-toml): New variables.
 2018-09-12 22:16:23 -04:00
Maxim Cournoyer
4bd8f4f302
gnu: python-jedi: Update to 0.12.1. 
* gnu/packages/python.scm (python-jedi): Update to 0.12.1.
[propagated-inputs]: Move python-parso here, as it is required at run time.
 2018-09-12 22:16:18 -04:00
Danny Milosavljevic
614cfd5c54
gnu: Add rust@1.20.0. 
* gnu/packages/rust.scm (rust-1.20): New variable.
 2018-09-13 00:25:01 +02:00
Danny Milosavljevic
3763e7716c
gnu: rust@1.19.0: Remove superfluous install-file call. 
* gnu/packages/rust.scm (rust-1.19)[arguments]<#:phases>[build]: Remove
superfluous install-file call.
 2018-09-12 23:17:42 +02:00
Danny Milosavljevic
5a3fcf5b44
gnu: rust@1.19.0: Install rustdoc. 
* gnu/packages/rust.scm (rust-1.19)[arguments]<#:phases>[install]: Install
rustdoc.
 2018-09-12 23:17:42 +02:00
Danny Milosavljevic
0bcd1bc778
gnu: rust@1.19.0: Use match-lambda directly. 
Follow-up to 3159ef7c99.

* gnu/packages/rust.scm (rust-1.19)[arguments]<#:phases>[build]: Use
match-lambda directly.
 2018-09-12 23:17:42 +02:00
Nils Gillmann
f006237c54
gnu: gnurl: Update to 7.61.1. 
* gnu/packages/gnunet.scm (gnurl): Update to 7.61.1.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2018-09-12 16:02:39 -04:00
Leo Famulari
ff9008d8de
gnu: Zsh: Remove workaround required for Zsh 5.6. 
This is a followup to commit 5a5d3e3563.

* gnu/packages/shells.scm (zsh)[arguments]: Remove substitutions in 'patch-test'
phase.
 2018-09-12 15:21:42 -04:00
Pierre Neidhardt
4fa7f29f2a
gnu: emacs-hl-todo: Update to 1.9.0. 
* gnu/packages/emacs.scm (emacs-hl-todo): Update to 1.9.0.
 2018-09-12 19:51:26 +02:00
Ricardo Wurmus
4a89bdd196
gnu: python-scikit-learn: Update to 0.19.2. 
* gnu/packages/machine-learning.scm (python-scikit-learn): Update to 0.19.2.
[source]: Fetch from git.
[arguments]: Run tests before installation; replace "check" phase, add
"build-ext" phase; delete "reset-gzip-timestamps" phase.
[native-inputs]: Add python-pytest and python-pandas; remove python-nose.
 2018-09-12 19:35:02 +02:00
Pierre Neidhardt
b002809f84
gnu: Add emacs-blimp. 
* gnu/packages/emacs.scm (emacs-blimp): New variable.
 2018-09-12 19:34:17 +02:00
Pierre Neidhardt
320105eadb
gnu: Add emacs-org-web-tools. 
* gnu/packages/emacs.scm (emacs-org-web-tools): New variable.
 2018-09-12 19:34:17 +02:00
Pierre Neidhardt
9c208f38f2
gnu: Add emacs-youtube-dl. 
* gnu/packages/emacs.scm (emacs-youtube-dl): New variable.
 2018-09-12 19:34:14 +02:00
Tobias Geerinckx-Rice
acd4da3f29
gnu: libfilezilla: Update to 0.13.1. 
* gnu/packages/ftp.scm (libfilezilla): Update to 0.13.1.
 2018-09-12 16:44:08 +02:00
Tobias Geerinckx-Rice
bec13d872d
gnu: sg3-utils: Update to 1.43. 
* gnu/packages/scsi.scm (sg3-utils): Update to 1.43.
[license]: Add bsd-2.
 2018-09-12 16:44:08 +02:00
Tobias Geerinckx-Rice
0f304ba73e
gnu: syslinux: Use HTTPS home page. 
* gnu/packages/bootloaders.scm (syslinux)[home-page]: Use HTTPS.
 2018-09-12 16:09:38 +02:00
Tobias Geerinckx-Rice
60d8db74c6
gnu: syslinux: Use INVOKE. 
* gnu/packages/bootloaders.scm (syslinux)[arguments]: Substitute INVOKE
for SYSTEM*.
 2018-09-12 16:09:38 +02:00
Tobias Geerinckx-Rice
5a5d3e3563
gnu: zsh: Update to 5.6.1. 
* gnu/packages/shells.scm (zsh): Update to 5.6.1.
 2018-09-12 16:09:38 +02:00
Tobias Geerinckx-Rice
4dbef67102
gnu: zsh: Use HTTPS. 
* gnu/packages/shells.scm (zsh)[source, home-page]: Use HTTPS.
 2018-09-12 16:09:37 +02:00
Tobias Geerinckx-Rice
c8749b0250
gnu: Add perl-mock-config. 
* gnu/packages/perl-check.scm (perl-mock-config): New public variable.
 2018-09-12 16:09:37 +02:00
Efraim Flashner
b2c8d31ff6
gnu: perl-moosex-getopt: Update to 0.73. 
* gnu/packages/perl.scm (perl-moosex-getopt): Update to 0.73.
[native-inputs]: Add perl-module-build-tiny, perl-path-tiny,
perl-test-needs.
 2018-09-12 10:28:47 +03:00
Eric Bavier
50b3b83143
netsurf: Register patch. 
Follow-up to f9e140a243.

* gnu/local.mk (dist_patch_DATA): Add netsurf-message-timestamp.patch.
 2018-09-11 20:29:04 -05:00
Eric Bavier
bbe46a4af5
mpi: Factorize openmpi setup build phase. 
* gnu/packages/mpi.scm (%openmpi-setup): New variable.
* gnu/packages/maths.scm (scalapack, slepc-openmpi, mumps-openmpi)
(superlu-dist, p4est, petsc-openmpi, hypre-openmpi, elemental)
(sundials-openmpi, arpack-ng-openmpi)[arguments]: Use it in #:phases.
 2018-09-11 20:29:04 -05:00
Eric Bavier
5882078e8c
font-fantasque-sans: Upgrade to 1.7.2. 
* gnu/packages/fonts.scm (font-fantasque-sans): Upgrade to 1.7.2.
[native-inputs]: Add zip.
[arguments]: Add 'xrange->range phase for python3 compatibility.  Adjust
install phase to work with newly generated font variants.
 2018-09-11 20:29:03 -05:00
Pierre Neidhardt
2b0820bf0d
gnu: emacs-helm: Update to 3.0. 
* gnu/packages/emacs.scm (emacs-helm): Update to 3.0.
 2018-09-11 23:53:35 +02:00
Pierre Neidhardt
ee0d184502
gnu: Add emacs-hackernews. 
* gnu/packages/emacs.scm (emacs-hackernews): New variable.
 2018-09-11 23:53:35 +02:00
Pierre Neidhardt
bd8f74dfbe
gnu: emacs-evil-collection: Update to 20180911. 
* gnu/packages/emacs.scm (emacs-evil-collection): Update to 20180911.
 2018-09-11 23:53:35 +02:00
Pierre Neidhardt
ac9e307740
gnu: emacs-magit-todos: Update to 1.1. 
* gnu/packages/emacs.scm (emacs-magit-todos): Update to 1.1.
 2018-09-11 23:53:35 +02:00
Pierre Neidhardt
475e16578f
gnu: emacs-helm-system-packages: Update to 1.10.1. 
* gnu/packages/emacs.scm (emacs-helm-system-packages): Update to 1.10.1.
 2018-09-11 23:53:35 +02:00
Jan Nieuwenhuizen
4a67079f71
gnu: mes: Oops, use mirror://gnu download url. 
* gnu/packages/mes.scm (mes): Oops, use mirror://gnu download url.
 2018-09-11 22:34:02 +02:00
Tobias Geerinckx-Rice
a855117c59
gnu: snakemake: Update home page. 
* gnu/packages/python.scm (snakemake)[home-page]: Update.
 2018-09-11 21:12:43 +02:00
Tobias Geerinckx-Rice
9b83c15afe
gnu: snakemake: Update to 5.2.2. 
* gnu/packages/python.scm (snakemake): Update to 5.2.2.
 2018-09-11 21:03:08 +02:00
Tobias Geerinckx-Rice
a93de1ae9e
gnu: obnam: Add deprecation warning. 
* gnu/packages/backup.scm (obnam)[synopsis, description]: Note its
retirement.
 2018-09-11 21:03:07 +02:00
Tobias Geerinckx-Rice
cd1e138cc6
gnu: unbound: Update to 1.8.0. 
* gnu/packages/dns.scm (unbound): Update to 1.8.0.
 2018-09-11 21:03:07 +02:00
Tobias Geerinckx-Rice
702a87f2d1
gnu: perl-dbd-mysql: Update to 4.047. 
* gnu/packages/databases.scm (perl-dbd-mysql): Update to 4.047.
[arguments]: Add 'skip-library-detection' phase.
 2018-09-11 21:03:07 +02:00
Jonathan Brielmaier
52b0a352c3
gnu: libreoffice: Update to 6.1.0.3. 
* gnu/packages/libreoffice.scm (libreoffice): Update to 6.1.0.3.
[source]: Correct indenting.
[inputs]: Add libnumbertext and python-lxml.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2018-09-11 17:46:30 +02:00
Jonathan Brielmaier
aeba7d4650
gnu: Add libnumbertext. 
* gnu/packages/libreoffice.scm (libnumbertext): New public variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2018-09-11 17:46:30 +02:00
Paul Garlick
aa82260bc0
gnu: arpack-ng-openmpi: Fix build. 
* gnu/packages/maths.scm (arpack-ng-openmpi)[arguments]: Add
'set-test-environment phase.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2018-09-11 17:46:29 +02:00
Tim Gesthuizen
d2fe71b04d
gnu: Add emacs-irony-mode. 
* gnu/packages/emacs.scm (emacs-irony-mode): New variable.
(emacs-irony-mode-server): New variable.

Co-authored-by: Ludovic Courtès <ludo@gnu.org>
 2018-09-11 17:46:28 +02:00
Ludovic Courtès
8539eb5c46
gnu: jupyter-guile-kernel: Add dependencies to the search path. 
This allows:

  guix environment --ad-hoc jupyter jupyter-guile-kernel \
    -- jupyter notebook

to work out-of-the-box.

* gnu/packages/guile.scm (jupyter-guile-kernel)[arguments]: In
'install-kernel' phase, add '-L' and '-C' flags to 'kernel.json'.
[propagated-inputs]: Remove.
[inputs]: Add GUILE-JSON and GUILE-SIMPLE-ZMQ.
 2018-09-11 17:46:28 +02:00
Ludovic Courtès
828fa94d7a
gnu: guile-simple-zmq, jupyter-guile-kernel: Update to 5bb66a0 and a7db924. 
* gnu/packages/guile.scm (guile-simple-zmq): Update to 5bb66a0.
(jupyter-guile-kernel): Update to a7db924.
 2018-09-11 17:46:28 +02:00
Mădălin Ionel Patrașcu
01af264dcb
gnu: Add r-svgui. 
* gnu/packages/cran.scm (r-svgui): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2018-09-11 17:27:10 +02:00
Marius Bakke
f6b7ccc9f9
gnu: spice: Update to 0.14.1 [fixes CVE-2018-10873]. 
* gnu/packages/spice.scm (spice): Update to 0.14.1.
[source](uri): Update to new "spice-server" subdirectory.
[native-inputs]: Add GLIB-NETWORKING and GSETTINGS-DESKTOP-SCHEMAS.
[arguments]: Remove configure-flag which is now off even when celt is
available.  Add phase to set $SSL_CERT_FILE.
 2018-09-11 14:12:53 +02:00
Marius Bakke
41a659d2ec
gnu: usbredir: Update to 0.8.0. 
* gnu/packages/spice.scm (usbredir): Update to 0.8.0.
[source]: Use URL-FETCH.
[native-inputs]: Remove AUTOCONF, AUTOMAKE and LIBTOOL.
[arguments]: Remove.
 2018-09-11 14:12:53 +02:00
Leo Famulari
b4ff75b507
gnu: syncthing: Update to 0.14.50. 
* gnu/packages/syncthing.scm (syncthing): Update to 0.14.50.
 2018-09-11 03:24:46 -04:00
Leo Famulari
e76709f71f
gnu: go-github-com-syncthing-notify: Update to 0.0.0-2.b76b458. 
* gnu/packages/syncthing.scm (go-github-com-syncthing-notify): Update to
0.0.0-2.b76b458.
 2018-09-11 03:24:42 -04:00
Leo Famulari
091ef8c97e
gnu: VLC: Update to 3.0.4. 
* gnu/packages/video.scm (vlc): Update to 3.0.4.
 2018-09-10 19:24:51 -04:00
Leo Famulari
5d9c28f117
gnu: git: Update to 2.19.0. 
* gnu/packages/version-control.scm (git): Update to 2.19.0.
(cgit)[inputs]: Use the source of Git 2.18.0.
 2018-09-10 19:02:45 -04:00
pimi
cbb0edd1be
gnu: Add r-abd. 
* gnu/packages/cran.scm (r-abd): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2018-09-11 00:14:58 +02:00
pimi
6c6ce2d088
gnu: Add r-mosaic. 
* gnu/packages/cran.scm (r-mosaic): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2018-09-11 00:14:58 +02:00
pimi
2f195b6f23
gnu: Add r-mosaicdata. 
* gnu/packages/cran.scm (r-mosaicdata): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2018-09-11 00:14:58 +02:00
Ricardo Wurmus
d54145c38a
gnu: guitarix: Update to 0.37.3. 
* gnu/packages/audio.scm (guitarix): Update to 0.37.3.
[inputs]: Add curl.
 2018-09-10 23:58:14 +02:00
Thorsten Wilms
029de52fe9
gnu: guitarix-lv2: Use correct configure flag. 
* gnu/packages/audio.scm (guitarix-lv2)[arguments]: Change configure flag.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2018-09-10 23:58:14 +02:00
Tobias Geerinckx-Rice
2740549754
gnu: kakoune: Use HTTPS home page. 
* gnu/packages/text-editors.scm (kakoune)[home-page]: Use HTTPS.
 2018-09-10 22:54:36 +02:00
Tobias Geerinckx-Rice
b38827096f
gnu: mcrl2: Use HTTPS home page. 
* gnu/packages/maths.scm (mcrl2)[home-page]: Use HTTPS.
 2018-09-10 22:54:36 +02:00
Tobias Geerinckx-Rice
4105f13bb5
gnu: tor: Update to 0.3.4.8. 
* gnu/packages/tor.scm (tor): Update to 0.3.4.8.
 2018-09-10 22:54:35 +02:00
Tobias Geerinckx-Rice
695775b138
gnu: kakoune: Update to 2018.09.04. 
* gnu/packages/text-editors.scm (kakoune): Update to 2018.09.04.
 2018-09-10 22:15:20 +02:00
Tobias Geerinckx-Rice
4b41568fa5
gnu: python-binaryornot: Update to 0.4.4. 
* gnu/packages/python.scm (python-binaryornot): Update to 0.4.4.
 2018-09-10 22:15:20 +02:00
Tobias Geerinckx-Rice
86788cb0c9
gnu: python-parse: Update to 1.8.4. 
* gnu/packages/python.scm (python-parse): Update to 1.8.4.
 2018-09-10 22:15:20 +02:00
Tobias Geerinckx-Rice
c0ea7f5ff4
gnu: python-parse: Mark up description. 
* gnu/packages/python.scm (python-parse)[description]: Use @code{}.
 2018-09-10 22:15:20 +02:00
Tobias Geerinckx-Rice
cc12ac58a2
gnu: python-jedi: Update to 0.12.1. 
* gnu/packages/python.scm (python-jedi): Update to 0.12.1.
[synopsis, description]: Adjust to expanded functionality.
 2018-09-10 22:15:19 +02:00