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Author SHA1 Message Date
Ricardo Wurmus
f6ae19fedc
gnu: r-clusterr: Update to 1.2.5. 
* gnu/packages/cran.scm (r-clusterr): Update to 1.2.5.
 2021-06-02 17:27:09 +02:00
Ricardo Wurmus
17bd981986
gnu: r-rsconnect: Update to 0.8.18. 
* gnu/packages/cran.scm (r-rsconnect): Update to 0.8.18.
 2021-06-02 17:27:09 +02:00
Ricardo Wurmus
318808dcdd
gnu: r-forecast: Update to 8.15. 
* gnu/packages/cran.scm (r-forecast): Update to 8.15.
 2021-06-02 17:27:09 +02:00
Ricardo Wurmus
317267c460
gnu: r-archivist: Update to 2.3.6. 
* gnu/packages/cran.scm (r-archivist): Update to 2.3.6.
 2021-06-02 17:27:09 +02:00
Ricardo Wurmus
b3aad04bed
gnu: r-biclust: Update to 2.0.3. 
* gnu/packages/cran.scm (r-biclust): Update to 2.0.3.
 2021-06-02 17:27:09 +02:00
Ricardo Wurmus
83fa31438d
gnu: r-actuar: Update to 3.1-4. 
* gnu/packages/cran.scm (r-actuar): Update to 3.1-4.
 2021-06-02 17:27:08 +02:00
Ricardo Wurmus
184b3c500c
gnu: r-gdina: Update to 2.8.7. 
* gnu/packages/cran.scm (r-gdina): Update to 2.8.7.
 2021-06-02 17:27:08 +02:00
Ricardo Wurmus
47cdb9c9a8
gnu: r-parameters: Update to 0.14.0. 
* gnu/packages/cran.scm (r-parameters): Update to 0.14.0.
 2021-06-02 17:27:08 +02:00
Ricardo Wurmus
8998ed1d8e
gnu: r-leiden: Update to 0.3.8. 
* gnu/packages/cran.scm (r-leiden): Update to 0.3.8.
 2021-06-02 17:27:08 +02:00
Ricardo Wurmus
81bb987e7e
gnu: r-plot3d: Update to 1.4. 
* gnu/packages/cran.scm (r-plot3d): Update to 1.4.
 2021-06-02 17:27:08 +02:00
Ricardo Wurmus
509eea0f5d
gnu: r-dalex: Update to 2.2.1. 
* gnu/packages/cran.scm (r-dalex): Update to 2.2.1.
 2021-06-02 17:27:08 +02:00
Ricardo Wurmus
37fc760ef1
gnu: r-spdep: Update to 1.1-8. 
* gnu/packages/cran.scm (r-spdep): Update to 1.1-8.
[source]: Remove generated files, including Rmarkdown files whose outputs
conflict with the main Rmarkdown file.
 2021-06-02 17:27:08 +02:00
Ricardo Wurmus
0a6526ebfd
gnu: r-tidytree: Update to 0.3.4. 
* gnu/packages/cran.scm (r-tidytree): Update to 0.3.4.
 2021-06-02 17:27:08 +02:00
Ricardo Wurmus
ee285cb4ce
gnu: r-ks: Update to 1.13.1. 
* gnu/packages/cran.scm (r-ks): Update to 1.13.1.
[propagated-inputs]: Add r-pracma.
 2021-06-02 17:27:08 +02:00
Ricardo Wurmus
caeed0e512
gnu: r-weights: Update to 1.0.2. 
* gnu/packages/cran.scm (r-weights): Update to 1.0.2.
[propagated-inputs]: Add r-lme4.
 2021-06-02 17:27:08 +02:00
Ricardo Wurmus
eb991f3168
gnu: r-mvabund: Update to 4.1.12. 
* gnu/packages/cran.scm (r-mvabund): Update to 4.1.12.
 2021-06-02 17:27:08 +02:00
Ricardo Wurmus
a9ecb3cf20
gnu: r-sjplot: Update to 2.8.8. 
* gnu/packages/cran.scm (r-sjplot): Update to 2.8.8.
 2021-06-02 17:27:08 +02:00
Ricardo Wurmus
0bc5c20756
gnu: r-effectsize: Update to 0.4.5. 
* gnu/packages/cran.scm (r-effectsize): Update to 0.4.5.
 2021-06-02 17:27:08 +02:00
Ricardo Wurmus
3a5b90d0ab
gnu: r-bayestestr: Update to 0.10.0. 
* gnu/packages/cran.scm (r-bayestestr): Update to 0.10.0.
 2021-06-02 17:27:08 +02:00
Ricardo Wurmus
0d813e0275
gnu: r-emmeans: Update to 1.6.1. 
* gnu/packages/cran.scm (r-emmeans): Update to 1.6.1.
 2021-06-02 17:27:08 +02:00
Ricardo Wurmus
304d9c5dd3
gnu: r-manipulatewidget: Update to 0.11.0. 
* gnu/packages/cran.scm (r-manipulatewidget): Update to 0.11.0.
[propagated-inputs]: Add r-shinyjs.
[native-inputs]: Add r-knitr.
 2021-06-02 17:27:08 +02:00
Ricardo Wurmus
8b459409a9
gnu: r-insight: Update to 0.14.1. 
* gnu/packages/cran.scm (r-insight): Update to 0.14.1.
 2021-06-02 17:27:07 +02:00
Ricardo Wurmus
6c5543d1d7
gnu: r-rdpack: Update to 2.1.2. 
* gnu/packages/cran.scm (r-rdpack): Update to 2.1.2.
 2021-06-02 17:27:07 +02:00
Ricardo Wurmus
27bff67ea9
gnu: r-fansi: Update to 0.5.0. 
* gnu/packages/cran.scm (r-fansi): Update to 0.5.0.
 2021-06-02 17:27:07 +02:00
Ricardo Wurmus
e6068fe401
gnu: r-zip: Update to 2.2.0. 
* gnu/packages/cran.scm (r-zip): Update to 2.2.0.
 2021-06-02 17:27:07 +02:00
Ricardo Wurmus
ec1666550d
gnu: r-signal: Update to 0.7-7. 
* gnu/packages/cran.scm (r-signal): Update to 0.7-7.
 2021-06-02 17:27:07 +02:00
Ricardo Wurmus
c4ca93cec9
gnu: r-tinytex: Update to 0.32. 
* gnu/packages/cran.scm (r-tinytex): Update to 0.32.
 2021-06-02 17:27:07 +02:00
Ricardo Wurmus
52eaf9d864
gnu: r-fitdistrplus: Update to 1.1-5. 
* gnu/packages/cran.scm (r-fitdistrplus): Update to 1.1-5.
 2021-06-02 17:27:07 +02:00
Ricardo Wurmus
05ee34f0de
gnu: r-inline: Update to 0.3.19. 
* gnu/packages/cran.scm (r-inline): Update to 0.3.19.
 2021-06-02 17:27:07 +02:00
Ricardo Wurmus
375fea067d
gnu: r-extremes: Update to 2.1-1. 
* gnu/packages/cran.scm (r-extremes): Update to 2.1-1.
 2021-06-02 17:27:07 +02:00
Ricardo Wurmus
8cc146b24a
gnu: r-bisquerna: Update to 1.0.5. 
* gnu/packages/bioconductor.scm (r-bisquerna): Update to 1.0.5.
[native-inputs]: Add r-knitr.
 2021-06-02 17:27:07 +02:00
Marius Bakke
882ec50ca1
gnu: python-django@2.2: Update to 2.2.24 [fixes CVE-2021-33203, CVE-2021-33571]. 
* gnu/packages/django.scm (python-django-2.2): Update to 2.2.24.
 2021-06-02 17:05:55 +02:00
Marius Bakke
e17b8d5e3f
gnu: python-django: Update to 3.2.4 [fixes CVE-2021-33203, CVE-2021-33571]. 
* gnu/packages/django.scm (python-django): Update to 3.2.4.
 2021-06-02 17:05:55 +02:00
Ron Nazarov via Guix-patches via
10343994dc
gnu: Add udftools. 
* gnu/packages/file-systems.scm (udftools): New variable.

Signed-off-by: Tobias Geerinckx-Rice <me@tobias.gr>
 2021-06-02 15:40:03 +02:00
Tobias Geerinckx-Rice
1bd85824c7
gnu: ispell: Update to 3.4.03. 
* gnu/packages/aspell.scm (ispell): Update to 3.4.03.
 2021-06-02 15:40:03 +02:00
Ricardo Wurmus
011d586c2c
gnu: Add biobambam2. 
* gnu/packages/bioinformatics.scm (biobambam2): New variable.
 2021-06-02 13:54:15 +02:00
Ricardo Wurmus
18e0081045
gnu: Add libmaus2. 
* gnu/packages/bioinformatics.scm (libmaus2): New variable.
 2021-06-02 13:54:15 +02:00
Ricardo Wurmus
f01215635a
gnu: r-with-tests: Update to 4.1.0. 
* gnu/packages/statistics.scm (r-with-tests): Update to 4.1.0.
 2021-06-02 13:54:15 +02:00
Tobias Geerinckx-Rice
6fee3239b3
gnu: memtester: Update to 4.5.1. 
* gnu/packages/hardware.scm (memtester): Update to 4.5.1.
 2021-06-02 12:53:10 +02:00
Tobias Geerinckx-Rice
fa26ca54f9
gnu: osip: Update to 5.2.1. 
* gnu/packages/telephony.scm (osip): Update to 5.2.1.
 2021-06-02 12:53:10 +02:00
Tobias Geerinckx-Rice
6c0a09b341
gnu: retroarch: Update to 1.9.4. 
* gnu/packages/emulators.scm (retroarch): Update to 1.9.4.
 2021-06-02 12:53:09 +02:00
Tobias Geerinckx-Rice
57278dc214
gnu: libavif: Update to 0.9.1. 
* gnu/packages/image.scm (libavif): Update to 0.9.1.
 2021-06-02 12:53:09 +02:00
Paul Garlick
da340369ac
gnu: python-vedo: Make pkg-config a native input. 
* gnu/packages/python-science.scm (python-vedo)[inputs]: Move pkg-config to...
[native-inputs]: ...here.
 2021-06-02 10:27:59 +01:00
Mark H Weaver
873c6b4f21
gnu: icecat: Update to 78.11.0-guix0-preview1 [fixes CVE-2021-29967]. 
* gnu/packages/gnuzilla.scm (%icecat-version, %icecat-build-id): Update.
(icecat-source): Update upstream source hash.
 2021-06-02 04:28:52 -04:00
Xinglu Chen
49e40006f6
gnu: python-hg-evolve: Update to 10.3.1. 
* gnu/packages/version-control.scm (python-hg-evolve): Update to 10.3.1.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2021-06-02 10:36:12 +03:00
Vinicius Monego
51e8539566
gnu: python-sphinx-gallery: Update to 0.9.0. 
* gnu/packages/sphinx.scm (python-sphinx-gallery): Update to 0.9.0.
[source]: Build from PyPI.
[arguments]: Enable tests. Add custom 'check phase and phase to make
test files writable.
[native-inputs]: Add python-joblib, python-matplotlib, python-numpy,
python-pillow, python-pytest, python-pytest-cov, python-sphinx. Remove
python-pytest-runner.
[home-page]: Follow redirect.
(python2-sphinx-gallery): Remove package.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2021-06-02 10:22:01 +03:00
Simon Streit
841edfa491
gnu: redis: Update to 6.2.4 [security fixes]. 
Fixes CVE-2021-29477.

* gnu/packages/databases.scm (redis): Update to 6.2.4.
[arguments]: Disable the 'integration/failover' test.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2021-06-02 00:54:39 -04:00
Julien Lepiller
b94bc3ea30
gnu: Add frama-c. 
* gnu/packages/maths.scm (frama-c): New variable.
 2021-06-02 03:10:12 +02:00
Julien Lepiller
c9b3627d56
gnu: Add why3. 
* gnu/packages/maths.scm (why3): New variable.
 2021-06-02 03:10:04 +02:00
Zhu Zihao
2df1c4f134
gnu: rtl8821ce-linux-module: Update to 0.0.0-3.897e7c4. 
Fix the broken build with linux-libre 5.12.

* gnu/packages/linux.scm (rtl8821ce-linux-module): Update to 0.0.0-3.897e7c4.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2021-06-01 23:26:08 +02:00