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Author SHA1 Message Date
Ben Woodcroft
ed5e9a33f8
gnu: vsearch: Update to 2.5.1. 
* gnu/packages/bioinformatics.scm (vsearch): Update to 2.5.1.
 2017-10-26 19:55:29 +10:00
Efraim Flashner
8ba3f751b6
gnu: r-nloptr: Update package hash. 
The source was repacked and reuploaded without incrementing the version
number. The difference was windows line endings on the windows files.

* gnu/packages/statistics.scm (r-nloptr)[source]: Update package hash.
 2017-10-26 10:46:02 +03:00
Efraim Flashner
e5af1f4af3
gnu: sorcer: Fix building on non-Intel hardware. 
* gnu/packages/music.scm (sorcer)[arguments]: Add phase to remove
architecture specific build flags.
 2017-10-26 08:37:40 +03:00
Andy Patterson
b1e9837a3c
gnu: virt-manager: Enable persistent configuration support. 
* gnu/packages/virtualization.scm (virt-manager)[inputs]: Add dconf.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-10-25 22:26:15 -07:00
Andy Patterson
f023685dca
gnu: virt-manager: Wrap with GSettings schema and GIO modules search paths. 
Fixes a crash when opening the file chooser dialog.

* gnu/packages/virtualization.scm (virt-manager)[arguments]
<#:imported-modules>: Add (guix build glib-or-gtk-build-system).
<#:modules>: Import (guix build glib-or-gtk-build-system) as glib-or-gtk:.
<#:arguments>: Add 'glib-or-gtk-compile-schemas and 'glib-or-gtk-wrap.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-10-25 22:26:15 -07:00
ng0
60e9529729
gnu: Add python2-roca-detect. 
* gnu/packages/crypto.scm (python2-roca-detect): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-10-25 22:26:15 -07:00
ng0
7756eab078
gnu: Add python2-pgpdump. 
* gnu/packages/gnupg.scm (python2-pgpdump): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-10-25 22:25:57 -07:00
ng0
0046309398
gnu: Add python-coloredlogs. 
* gnu/packages/python.scm (python-coloredlogs, python2-coloredlogs): New
variables.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-10-25 22:25:20 -07:00
ng0
7d4147634b
gnu: Add python-verboselogs. 
* gnu/packages/python.scm (python-verboselogs, python2-verboselogs): New
variables.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-10-25 22:25:20 -07:00
ng0
2a81537f2f
gnu: Add python-capturer. 
* gnu/packages/python.scm (python-capturer, python2-capturer): New
variables.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-10-25 22:25:19 -07:00
ng0
92eb9a3535
gnu: Add python-humanfriendly. 
* gnu/packages/python.scm (python-humanfriendly, python2-humanfriendly):
New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-10-25 22:25:19 -07:00
Leo Famulari
17650569d4
gnu: Fix Leo Famulari's copyright statement in (gnu packages calcurse). 
* gnu/packages/calcurse.scm: Fix copyright statement.
 2017-10-25 14:45:43 -04:00
Leo Famulari
a23dbbff14
gnu: calcurse: Used the "fixed" test-only tzdata for tests. 
* gnu/packages/calcurse.scm (calcurse)[inputs]: Remove tzdata and add ...
[native-inputs]: tzdata-2017a.
[arguments]: Add tzdata-2017a to #:disallowed-references.
 2017-10-25 14:44:38 -04:00
Efraim Flashner
c4b542ffd4
gnu: parallel: Update to 20171022. 
* gnu/packages/parallel.scm (parallel): Update to 20171022.
 2017-10-25 21:37:53 +03:00
Tobias Geerinckx-Rice
63bbf38fb1
gnu: expat: Update replacement to 2.2.4 [security fixes]. 
See 'Changes' in the source distribution for more information about the
fixed security issues.

* gnu/packages/xml.scm (expat)[replacement]: Update to 2.2.4.
(expat-2.2.2): Replace with...
(expat-2.2.4): ...new variable.
 2017-10-25 19:06:37 +02:00
Tobias Geerinckx-Rice
c61cac6902
gnu: tor: Update to 0.3.1.8. 
* gnu/packages/tor.scm (tor): Update to 0.3.1.8.
 2017-10-25 18:13:09 +02:00
Tobias Geerinckx-Rice
65808ba4ec
gnu: sssd: Add missing word to description. 
* gnu/packages/sssd.scm (sssd)[description]: Fix typo.
 2017-10-25 18:13:08 +02:00
Tobias Geerinckx-Rice
06c1304652
gnu: sssd: Update to 1.16.0. 
* gnu/packages/sssd.scm (sssd): Update to 1.16.0.
 2017-10-25 18:13:08 +02:00
Tobias Geerinckx-Rice
3d96f2320a
gnu: ding-libs: Update to 0.6.1. 
* gnu/packages/sssd.scm (ding-libs): Update to 0.6.1.
 2017-10-25 18:13:08 +02:00
Efraim Flashner
a6e67d867c
gnu: r-ff: Remove aarch64-linux from supported-systems. 
* gnu/packages/cran.scm (r-ff)[supported-systems]: New field.
 2017-10-25 19:07:11 +03:00
Efraim Flashner
dda785f660
gnu: go@1.4: Limit supported systems. 
* gnu/packages/golang.scm (go@1.4)[supported-systems]: New field,
Limit supported systems to x86_64-linux, i686-linux and armhf-linux.
(go@1.9)[supported-systems]: New field.
 2017-10-25 19:07:10 +03:00
Ricardo Wurmus
c633b911ce
gnu: perl-moox-file-configdir: Fix source URL. 
* gnu/packages/perl.scm (perl-moox-file-configdir)[source]: Fix typo in source
URL.
 2017-10-25 16:40:09 +02:00
Kyle Meyer
4c77abc4da
gnu: Add r-forcats. 
* gnu/packages/statistics.scm (r-forcats): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2017-10-25 16:24:03 +02:00
Ricardo Wurmus
6a23c8b183
gnu: Add sqlite-with-fts3. 
* gnu/packages/databases.scm (sqlite-with-fts3): New variable.

Co-authored-by: Pierre Langlois <pierre.langlois@gmx.com>
 2017-10-25 15:13:38 +02:00
Pierre Langlois
de98f4ed55
gnu: Add crypto++. 
* gnu/packages/crypto.scm (crypto++): New variable.
* gnu/packages/patches/crypto++-fix-dos-in-asn.1-decoders.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.

Co-authored-by: Ricardo Wurmus <rekado@elephly.net>
 2017-10-25 14:54:13 +02:00
Pierre Langlois
60b7ed9cb8
gnu: Add libechonest. 
* gnu/packages/music.scm (libechonest): New variable.

Co-authored-by: Ricardo Wurmus <rekado@elephly.net>
 2017-10-25 14:54:13 +02:00
Pierre Langlois
412d00728e
gnu: Add qjson. 
* gnu/packages/web.scm (qjson): New variable.

Co-authored-by: Ricardo Wurmus <rekado@elephly.net>
 2017-10-25 14:54:09 +02:00
Petter
15b0844257
gnu: Add parcimonie. 
* gnu/packages/gnupg.scm (parcimonie): New variable.

Co-authored-by: Ricardo Wurmus <rekado@elephly.net>
 2017-10-25 10:49:38 +02:00
Petter
985c41458d
gnu: Add perl-browser-open. 
* gnu/packages/perl.scm (perl-browser-open): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2017-10-25 10:49:38 +02:00
Petter
65f7f60693
gnu: Add perl-b-keywords. 
* gnu/packages/perl.scm (perl-b-keywords): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2017-10-25 10:49:38 +02:00
Petter
2a013d0f09
gnu: Add perl-carp-always. 
* gnu/packages/perl.scm (perl-carp-always): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2017-10-25 10:49:38 +02:00
Petter
fc4083c54f
gnu: Add perl-net-dbus-glib. 
* gnu/packages/glib.scm (perl-net-dbus-glib): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2017-10-25 10:49:38 +02:00
Petter
a372c4da2f
gnu: Add perl-net-dbus. 
* gnu/packages/glib.scm (perl-net-dbus): New variable.

Co-authored-by: Ricardo Wurmus <rekado@elephly.net>
 2017-10-25 10:49:37 +02:00
Eric Bavier
24404eaf93
gnu: dealii: Update to 8.5.1. 
Fixes compilation with boost@1.64.0.

* gnu/packages/maths.scm (dealii): Update to 8.5.1.
 2017-10-24 20:16:50 -05:00
Eric Bavier
4150da630f
gnu: p4est: Update to 2.0. 
* gnu/packages/maths.scm (p4est): Update to 2.0.
 2017-10-24 20:16:50 -05:00
Eric Bavier
9ce587f231
gnu: libhilbert: Remove package. 
This package's source and webpage has disappeared for some time, and upstream
projects (e.g. libmesh) seem to be bundling it, so we remove it for now.

* gnu/packages/maths.scm (libhilbert): Remove variable.
 2017-10-24 20:16:49 -05:00
Eric Bavier
958b5a1caa
gnu: slepc: Update to 3.8.0. 
* gnu/packages/maths.scm (slepc): Update to 3.8.0.
 2017-10-24 20:16:49 -05:00
Eric Bavier
6fec298d3e
gnu: petsc: Update to 3.8.0. 
* gnu/packages/maths.scm (petsc): Update to 3.8.0
[native-inputs]: Remove perl, which is no longer needed.
 2017-10-24 20:16:42 -05:00
Ben Woodcroft
6f141eff47
gnu: bwa: Update to 0.7.17. 
* gnu/packages/bioinformatics.scm (bwa): Update to 0.7.17.
 2017-10-25 09:29:22 +10:00
Ben Woodcroft
ae6e00f6f9
gnu: bwa: Change source URL to GitHub. 
* gnu/packages/bioinformatics.scm (bwa)[source]: Change source URL to
GitHub.
 2017-10-25 09:29:22 +10:00
Petter
85c991b029
gnu: Add perl-moox-options. 
* gnu/packages/perl.scm (perl-moox-options): New variable.

Co-authored-by: Ricardo Wurmus <rekado@elephly.net>
 2017-10-24 23:30:25 +02:00
Ricardo Wurmus
68998abd4f
gnu: perl-getopt-long-descriptive: Update to 0.100. 
* gnu/packages/perl.scm (perl-getopt-long-descriptive): Update to 0.100.
[native-inputs]: Add perl-cpan-meta-check.
 2017-10-24 23:30:24 +02:00
Petter
b936ddf312
gnu: Add perl-moox-configfromfile. 
* gnu/packages/perl.scm (perl-moox-configfromfile): New variable.

Co-authored-by: Ricardo Wurmus <rekado@elephly.net>
 2017-10-24 23:30:24 +02:00
Petter
8df39f572c
gnu: Add perl-moox-file-configdir. 
* gnu/packages/perl.scm (perl-moox-file-configdir): New variable.

Co-authored-by: Ricardo Wurmus <rekado@elephly.net>
 2017-10-24 23:30:24 +02:00
Petter
658a4976fa
gnu: Add perl-moox-cmd. 
* gnu/packages/perl.scm (perl-moox-cmd): New variable.

Co-authored-by: Ricardo Wurmus <rekado@elephly.net>
 2017-10-24 23:30:24 +02:00
Ricardo Wurmus
b547ef1d09
gnu: perl-list-moreutils: Update to 0.426. 
* gnu/packages/perl.scm (perl-list-moreutils): Update to 0.426.
[arguments]: Work around dotless @INC problem.
[native-inputs]: Add perl-test-leaktrace; remove perl-inc-latest and
perl-test-writevariants.
[propagated-inputs]: Add perl-list-moreutils-xs.
 2017-10-24 23:30:24 +02:00
Ricardo Wurmus
189bfb1112
gnu: Add perl-list-moreutils-xs. 
* gnu/packages/perl.scm (perl-list-moreutils-xs): New variable.
 2017-10-24 23:30:24 +02:00
Petter
544dc8d46b
gnu: Add perl-libintl-perl. 
* gnu/packages/perl.scm (perl-libintl-perl): New variable.

Co-authored-by: Ricardo Wurmus <rekado@elephly.net>
 2017-10-24 23:30:23 +02:00
Petter
180411e3f4
gnu: Add perl-file-configdir. 
* gnu/packages/perl.scm (perl-file-configdir): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2017-10-24 23:30:23 +02:00
Petter
987232e67d
gnu: Add perl-data-record. 
* gnu/packages/perl.scm (perl-data-record): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2017-10-24 23:30:23 +02:00