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Author SHA1 Message Date
Ricardo Wurmus
29fe71152f
gnu: python-rpy2: Update to 3.0.4-1.19868a8. 
* gnu/packages/statistics.scm (python-rpy2): Update to 3.0.4-1.19868a8.
[source]: Fetch from repository.
[propagated-inputs]: Add python-cffi, python-numpy, python-pandas,
python-ipython, and python-tzlocal.
[native-inputs]: Add python-pytest.
[arguments]: Set TZ variable and use pytest to run the tests.
 2019-07-13 23:50:01 +02:00
Leo Famulari
06e1ecbf17
doc: Update keyserver URL. 
* HACKING (Commit Access): Change keyserver URL to 'keys.openpgp.org'.
 2019-07-13 14:25:19 -04:00
Hartmut Goebel
6b61dea336
gnu: Add pngquant. 
* gnu/packages/image.scm (pngquant): New variable.
 2019-07-13 20:04:44 +02:00
Hartmut Goebel
8db1bd188b
gnu: Add libimagequant. 
* gnu/packages/image.scm (libimagequant): New variable.
 2019-07-13 20:04:44 +02:00
Jacob MacDonald
f24276de9a
gnu: docker-compose: Update to 1.24.1. 
* gnu/packages/docker.scm (docker-compose): Update to 1.24.1.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2019-07-13 15:13:53 +02:00
Jacob MacDonald
3146b6da6d
gnu: python-docker-py: Update to 3.7.3. 
* gnu/packages/docker.scm (python-docker-py): Update to 3.7.3.
[inputs]: Use PYTHON-REQUESTS-2.20 instead of PYTHON-REQUESTS.
Add PYTHON-DOCKER-PYCREDS, PYTHON-IPADDRESS, PYTHON-PARAMIKO, and
PYTHON-URLLIB3-1.24.

Co-authored-by: Ludovic Courtès <ludo@gnu.org>
 2019-07-13 15:13:53 +02:00
Jacob MacDonald
8bb591d426
gnu: python-dockerpty: Update to 0.4.1. 
* gnu/packages/docker.scm (python-dockerpty): Update to 0.4.1.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2019-07-13 15:13:53 +02:00
Jacob MacDonald
d59d56b2ad
gnu: python-docker-pycreds: Update to 0.4.0. 
* gnu/packages/docker.scm (python-docker-pycreds): Update to 0.4.0.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2019-07-13 15:13:53 +02:00
Jacob MacDonald
52cc489292
gnu: python-texttable: Update to 0.9.1. 
* gnu/packages/python-xyz.scm (python-texttable): Update to 0.9.1.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2019-07-13 15:13:53 +02:00
Jacob MacDonald
97f0bd7d68
gnu: Add python-requests-2.20. 
* gnu/packages/python-web.scm (python-requests-2.20): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2019-07-13 15:13:53 +02:00
Jacob MacDonald
a76e6a690f
gnu: Add python-idna-2.7. 
* gnu/packages/python-xyz.scm (python-idna-2.7): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2019-07-13 15:13:53 +02:00
Jacob MacDonald
7deb086864
gnu: Add python-urllib3-1.24. 
* gnu/packages/python-web.scm (python-urllib3-1.24): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2019-07-13 15:13:52 +02:00
Jacob MacDonald
e308b4f06a
gnu: Add python-cached-property. 
* gnu/packages/python-xyz.scm (python-cached-property): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2019-07-13 15:13:52 +02:00
Ludovic Courtès
86b0b7917f
gnu: rush: Update to 2.1. 
* gnu/packages/rush.scm (rush): Update to 2.1.
 2019-07-13 15:13:52 +02:00
Ricardo Wurmus
c1b87329bf
gnu: pigx-rnaseq: Update to 0.0.10. 
* gnu/packages/bioinformatics.scm (pigx-rnaseq): Update to 0.0.10.
 2019-07-13 13:51:52 +02:00
Tobias Geerinckx-Rice
2a059ab995
doc: Increase VM memory size. 
* doc/guix.texi (Running Guix in a VM): Bump ‘-m‘ to 1 GiB to match its
@item below, and have a chance of being usable, too.
 2019-07-13 05:26:01 +02:00
Tobias Geerinckx-Rice
ffae5a7946
doc: Update gpg key fetching instructions. 
This mirrors the steps performed by etc/guix-install.sh.

* doc/guix.texi (KEY-SERVER): Replace moribund SKS key servers with...
(OPENPGP-SIGNING-KEY-URL): ...the TLS PKI of the future.
(Binary Installation, USB Stick and DVD Installation): Update the
@example gpg command to download the key directly from Savannah.
 2019-07-13 04:55:46 +02:00
Tobias Geerinckx-Rice
2516ba81be
gnu: wcslib: Update to 6.2. 
* gnu/packages/astronomy.scm (wcslib): Update to 6.2.
[arguments]: Add #:configure-flags to find CFITSIO.
 2019-07-13 00:20:21 +02:00
Tobias Geerinckx-Rice
7fc2d3a92d
gnu: wcslib: Don't use NAME in source URI. 
* gnu/packages/astronomy.scm (wcslib)[source]: Hard-code NAME.
 2019-07-13 00:20:21 +02:00
Arne Babenhauserheide
17f90b679f
gnu: guile-wisp: fix url 
* gnu/packages/guile-xyz.scm (guile-wisp): add www to url (required due to hoster-changes)

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2019-07-12 23:54:19 +02:00
Arne Babenhauserheide
65610f7326
gnu: wisp: update to 1.0.2. 
* gnu/packages/guile-xyz (wisp): update to version 1.0.2.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2019-07-12 23:54:19 +02:00
Timotej Lazar
9d34cc133f
gnu: cmus: Support AAC format. 
* gnu/packages/music.scm (cmus)[inputs]: Add faad2.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2019-07-12 23:54:19 +02:00
Ludovic Courtès
e429566fbb
build: Use '-Wshadowed-toplevel' only when supported. 
* guix/build/compile.scm (supported-warning-type?): New procedure.
(%warnings): Remove 'unsupported-warning', though removing it doesn't
make any difference.  Define 'optional', and use it to determine whether
to include 'shadowed-toplevel'.
 2019-07-12 23:54:19 +02:00
Oleg Pykhalov
6cf63fe887
gnu: Add emacs-gitlab-ci-mode. 
* gnu/packages/emacs-xyz.scm (emacs-gitlab-ci-mode): New variable.
 2019-07-13 00:22:55 +03:00
Oleg Pykhalov
5516a75b0b
gnu: Add emacs-matcha. 
* gnu/packages/emacs-xyz.scm (emacs-matcha): New variable.
 2019-07-13 00:22:52 +03:00
Leo Famulari
dd9c137b2c
gnu: Blender: Update to 2.80-rc1. 
* gnu/packages/graphics.scm (blender): Update to 2.80-rc1.
 2019-07-12 15:58:44 -04:00
Leo Famulari
04d52b1a95
gnu: OpenImageIO: Update to 1.8.17. 
* gnu/packages/graphics.scm (openimageio): Update to 1.8.17.
(openimageio-1.7): New variable.
(blender-2.79)[inputs]: Use openimageio-1.7.
 2019-07-12 15:58:41 -04:00
Arun Isaac
7f1c69f5d3
gnu: Add aptdec. 
* gnu/packages/ham-radio.scm (aptdec): New variable.
 2019-07-12 22:44:55 +05:30
Tanguy Le Carrour
90bb244f29
gnu: Add grisbi. 
* gnu/packages/finance.scm (grisbi): New variable.

Signed-off-by: Timothy Sample <samplet@ngyro.com>
 2019-07-12 12:05:00 -04:00
Tobias Geerinckx-Rice
ca31f76b86
gnu: rust: Fix hash. 
I don't know what the previous hash described, but the signature on this
one is valid.

* gnu/packages/rust.scm (rust)[source]: Update hash.
 2019-07-12 14:55:11 +02:00
Ivan Petkov
f67f93b6d6
gnu: rust: Update to 1.36.0. 
* gnu/packages/rust.scm (rust): Rename to...
(rust-1.35): ...this.
(rust): New variable.
 2019-07-11 20:18:07 -07:00
Leo Famulari
14727aaa03
gnu: certbot, python-acme: Update to 0.35.1. 
* gnu/packages/tls.scm (certbot, python-acme): Update to 0.35.1.
 2019-07-11 20:17:54 -04:00
Jack Hill
5a836ce38c
gnu: expat: fix CVE-2018-20843 
* gnu/packages/xml.scm (expat)[replacement]: New field.
(expat/fixed): New variable.
* gnu/packages/patches/expat-CVE-2018-20843.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add patch file.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
 2019-07-12 00:39:01 +02:00
Jack Hill
f85c8dd8ae
gnu: expat: Add additional source URI 
The expat sourceforge page announces that the project is in the process of
moving to GitHub.

* gnu/packages/xml.scm (expat)[source]: Add GitHub URI.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
 2019-07-12 00:39:01 +02:00
Ricardo Wurmus
c5ac35d750
gnu: mumi: Update to 0.0.0-4.ea0a28f. 
* gnu/packages/mail.scm (mumi): Update to 0.0.0-4.ea0a28f.
 2019-07-11 23:48:08 +02:00
Pierre Langlois
c894b80324
gnu: sbcl-clx: Update to 0.7.5. 
* gnu/packages/lisp.scm (sbcl-clx): Update to 0.7.5.
[origin]: Drop "clx-remove-demo.patch" and the snippet that removes demo code.
* gnu/packages/patches/clx-remove-demo.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2019-07-11 23:15:00 +02:00
Ludovic Courtès
3fb666bd40
gnu: pies: Update to 1.4. 
* gnu/packages/admin.scm (pies): Update to 1.4.
[arguments]: Modify /bin/sh reference in src/comp.c as well.
 2019-07-11 23:13:27 +02:00
Ludovic Courtès
5c3d44303e
guix gc: Correctly handle '--delete-generations' with no arguments. 
Previously, 'guix gc --delete-generations' would crash: the "" pattern
would be passed to 'matching-generations', which would return #f instead
of returning a list.

Reported by Raghav Gururajan <rvgn@disroot.org>
in <https://bugs.gnu.org/36466>.

* guix/ui.scm (matching-generations): Raise an error when passed an
invalid pattern.
* guix/scripts/gc.scm (delete-old-generations): Check if PATTERN is
true.
(%options): Leave ARG as-is for 'delete-generations'.
(guix-gc): Use 'assq' instead of 'assoc-ref' for 'delete-generations'.
* guix/scripts/package.scm (delete-matching-generations):
Replace (string-null? pattern) with (not pattern).  Remove 'else'
clause.
(%options): Leave ARG as-is for 'delete-generations'.
* guix/scripts/pull.scm (%options): Leave ARG as-is for
'list-generations'.
(process-query): Replace (string-null? pattern) with (not pattern).
* guix/scripts/system.scm (list-generations): Likewise, and remove
'else' clause.
(process-command): Use #f instead of "" when no pattern is given.
 2019-07-11 23:13:26 +02:00
Marius Bakke
878a6baa4c
Merge branch 'staging' 2019-07-11 20:33:44 +02:00
Mark H Weaver
1c65b0e9d5
gnu: linux-libre: Update to 5.1.17. 
* gnu/packages/linux.scm (%linux-libre-version): Update to 5.1.17.
(%linux-libre-hash): Update hash.
 2019-07-11 12:16:40 -04:00
Mark H Weaver
cba1dc68da
gnu: linux-libre@4.19: Update to 4.19.58. 
* gnu/packages/linux.scm (%linux-libre-4.19-version): Update to 4.19.58.
(%linux-libre-4.19-hash): Update hash.
 2019-07-11 12:15:47 -04:00
Mark H Weaver
783ebb961e
gnu: linux-libre@4.14: Update to 4.14.133. 
* gnu/packages/linux.scm (%linux-libre-4.14-version): Update to 4.14.133.
(%linux-libre-4.14-hash): Update hash.
 2019-07-11 12:14:56 -04:00
Mark H Weaver
d6fa410c1d
gnu: linux-libre@4.9: Update to 4.9.185. 
* gnu/packages/linux.scm (linux-libre-4.9): Update to 4.9.185.
 2019-07-11 12:14:16 -04:00
Mark H Weaver
17f874c594
gnu: linux-libre@4.4: Update to 4.4.185. 
* gnu/packages/linux.scm (linux-libre-4.4): Update to 4.4.185.
 2019-07-11 12:13:30 -04:00
Efraim Flashner
deae64ce01
gnu: vim-airline-themes: Update to 0.0.0-2.e6f2332. 
* gnu/packages/vim.scm (vim-airline-themes): Update to 0.0.0-2.e6f2332.
[version]: Use 'git-version'.
[source]: Use 'git-file-name'.
 2019-07-11 14:57:38 +03:00
Efraim Flashner
34e549d813
gnu: msmtp: Install additional files. 
* gnu/packages/mail.scm (msmtp)[arguments]: Rename custom phase
install-msmtpq to install-additional-files. Install vim plugins.
 2019-07-11 09:56:08 +03:00
Tobias Geerinckx-Rice
78ca483a07
gnu: perl-xml-compile: Update to 1.63. 
* gnu/packages/xml.scm (perl-xml-compile): Update to 1.63.
 2019-07-11 00:27:27 +02:00
Tobias Geerinckx-Rice
cf1b1ab007
gnu: perl-html-form: Update to 6.04. 
* gnu/packages/web.scm (perl-html-form): Update to 6.04.
 2019-07-11 00:27:27 +02:00
Tobias Geerinckx-Rice
4cf57c3c8d
gnu: xscreensaver: Remove CFLAG for old gcc versions. 
* gnu/packages/xdisorg.scm (xscreensaver)[arguments]: Do what the
comment tells us.
 2019-07-11 00:27:27 +02:00
Tobias Geerinckx-Rice
4995a40478
gnu: xscreensaver: Update to 5.43. 
* gnu/packages/xdisorg.scm (xscreensaver): Update to 5.43.
 2019-07-11 00:27:27 +02:00