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135844 commits

Author SHA1 Message Date
Ricardo Wurmus
2fc6d3bf31
gnu: r-aspli: Update to 2.14.0.
* gnu/packages/bioconductor.scm (r-aspli): Update to 2.14.0.
[propagated-inputs]: Add r-txdbmaker.

Change-Id: Ib60f87bf6166c68c6baded4e8555bafcf9573100
2024-05-08 12:53:19 +02:00
Ricardo Wurmus
e9d16dec70
gnu: r-asics: Update to 2.20.0.
* gnu/packages/bioconductor.scm (r-asics): Update to 2.20.0.

Change-Id: I6a778323b57e99a8bc8c1a2e2227079d9bdaff1c
2024-05-08 12:53:19 +02:00
Ricardo Wurmus
ddddc13f93
gnu: r-asgsca: Update to 1.38.0.
* gnu/packages/bioconductor.scm (r-asgsca): Update to 1.38.0.

Change-Id: I3f22548eae87db3eeb6691b45c30ab2edd452aac
2024-05-08 12:53:19 +02:00
Ricardo Wurmus
dffc5cf95c
gnu: r-aseb: Update to 1.48.0.
* gnu/packages/bioconductor.scm (r-aseb): Update to 1.48.0.

Change-Id: Ifb4450374fa2831bab9e360de6ec12f7c22f47d9
2024-05-08 12:53:18 +02:00
Ricardo Wurmus
f4c71864d5
gnu: r-asafe: Update to 1.30.0.
* gnu/packages/bioconductor.scm (r-asafe): Update to 1.30.0.

Change-Id: Id54647b1dadf071ea51c180ca50e5386a6078188
2024-05-08 12:53:18 +02:00
Ricardo Wurmus
3f31823f41
gnu: r-arrayquality: Update to 1.82.0.
* gnu/packages/bioconductor.scm (r-arrayquality): Update to 1.82.0.

Change-Id: I94b389cd121cb3748ad7a938c37b0c5152820ba3
2024-05-08 12:53:18 +02:00
Ricardo Wurmus
a0cef9b470
gnu: r-arraymvout: Update to 1.62.0.
* gnu/packages/bioconductor.scm (r-arraymvout): Update to 1.62.0.

Change-Id: Ic8cc9efc851af7471125e2ff2084d685c099d32b
2024-05-08 12:53:18 +02:00
Ricardo Wurmus
db7d9feb79
gnu: r-arrayqualitymetrics: Update to 3.60.0.
* gnu/packages/bioconductor.scm (r-arrayqualitymetrics): Update to 3.60.0.

Change-Id: Ia67c533b2b5c227a8cd2acaac8ab717517cd5d05
2024-05-08 12:53:18 +02:00
Ricardo Wurmus
e17b3add0d
gnu: r-arrayexpress: Update to 1.64.0.
* gnu/packages/bioconductor.scm (r-arrayexpress): Update to 1.64.0.

Change-Id: I01be57f62c13271442c4fb174ad923e29f8f63e8
2024-05-08 12:53:18 +02:00
Ricardo Wurmus
98eebefbf8
gnu: r-antiprofiles: Update to 1.44.0.
* gnu/packages/bioconductor.scm (r-antiprofiles): Update to 1.44.0.

Change-Id: Iac22dec83898624e88ad67983d4809729d6e2d09
2024-05-08 12:53:18 +02:00
Ricardo Wurmus
98890f8da7
gnu: r-annmap: Update to 1.46.0.
* gnu/packages/bioconductor.scm (r-annmap): Update to 1.46.0.

Change-Id: I2f693693c75b2729aa81c593c0ff3c07cc4f486f
2024-05-08 12:53:18 +02:00
Ricardo Wurmus
22784fbacf
gnu: r-anf: Update to 1.26.0.
* gnu/packages/bioconductor.scm (r-anf): Update to 1.26.0.

Change-Id: I0027bfaa713cf5b75c9ec52d72715c1d56955b92
2024-05-08 12:53:18 +02:00
Ricardo Wurmus
28cbac7461
gnu: r-aneufinder: Update to 1.32.0.
* gnu/packages/bioconductor.scm (r-aneufinder): Update to 1.32.0.

Change-Id: I1e3061cf514b735c84abc8b4e850236f493dd75d
2024-05-08 12:53:18 +02:00
Ricardo Wurmus
416fb74e92
gnu: r-altcdfenvs: Update to 2.66.0.
* gnu/packages/bioconductor.scm (r-altcdfenvs): Update to 2.66.0.

Change-Id: I4d6881076a68394206501f254045ff59a2b4bcec
2024-05-08 12:53:18 +02:00
Ricardo Wurmus
d237852199
gnu: r-alpsnmr: Update to 4.6.0.
* gnu/packages/bioconductor.scm (r-alpsnmr): Update to 4.6.0.

Change-Id: Ia35eda0125de276989767b8d663a128f3014582a
2024-05-08 12:53:18 +02:00
Ricardo Wurmus
b6f742d0f6
gnu: r-alphabeta: Update to 1.18.0.
* gnu/packages/bioconductor.scm (r-alphabeta): Update to 1.18.0.

Change-Id: I9970a01aec806faad204033d9ece392becfaca99
2024-05-08 12:53:18 +02:00
Ricardo Wurmus
70ac81d484
gnu: r-alevinqc: Update to 1.20.0.
* gnu/packages/bioconductor.scm (r-alevinqc): Update to 1.20.0.

Change-Id: Ib24ff6f3db37bf5d746c745999b768e1ec89dca3
2024-05-08 12:53:18 +02:00
Ricardo Wurmus
af81afffd5
gnu: r-aldex2: Update to 1.36.0.
* gnu/packages/bioconductor.scm (r-aldex2): Update to 1.36.0.

Change-Id: Iab362c11ad5960901eaefa016cda09cf65d23355
2024-05-08 12:53:18 +02:00
Ricardo Wurmus
47d9a75f1b
gnu: r-anvil: Update to 1.16.0.
* gnu/packages/bioconductor.scm (r-anvil): Update to 1.16.0.
[propagated-inputs]: Add r-biocbaseutils and r-yaml.

Change-Id: I30f38ca310819d75e5f57e381b0845632b022ff7
2024-05-08 12:53:18 +02:00
Ricardo Wurmus
736a73dec9
gnu: r-annotationhubdata: Update to 1.34.0.
* gnu/packages/bioconductor.scm (r-annotationhubdata): Update to 1.34.0.

Change-Id: I6e786c6c087b70650b3d0d84d14513a5856a08f2
2024-05-08 12:53:18 +02:00
Ricardo Wurmus
daae14ea1d
gnu: r-animalcules: Update to 1.20.0.
* gnu/packages/bioconductor.scm (r-animalcules): Update to 1.20.0.
[propagated-inputs]: Add r-ggforce and r-tidyr.

Change-Id: Ifc2493d7de069ba05ab79e6b8aeb0302325c9603
2024-05-08 12:53:18 +02:00
Ricardo Wurmus
6ed0d665aa
gnu: r-ancombc: Update to 2.6.0.
* gnu/packages/bioconductor.scm (r-ancombc): Update to 2.6.0.

Change-Id: I925595eb4d2191a75880cc28188d9d71e55bebd9
2024-05-08 12:53:18 +02:00
Ricardo Wurmus
e6f568abde
gnu: r-anaquin: Update to 2.28.0.
* gnu/packages/bioconductor.scm (r-anaquin): Update to 2.28.0.

Change-Id: I4ab5cff777b72696008df29ad3ef12f35e3106db
2024-05-08 12:53:18 +02:00
Ricardo Wurmus
a10b2020ca
gnu: r-amaretto: Update to 1.20.0.
* gnu/packages/bioconductor.scm (r-amaretto): Update to 1.20.0.

Change-Id: I22c13aa35f82397a9af41f44f5f335836b69e97d
2024-05-08 12:53:18 +02:00
Ricardo Wurmus
530f6d12d9
gnu: r-amplican: Update to 1.26.0.
* gnu/packages/bioconductor.scm (r-amplican): Update to 1.26.0.
[propagated-inputs]: Add r-pwalign.

Change-Id: I753f06199b24411565122e188da70e87278d7aa2
2024-05-08 12:53:18 +02:00
Ricardo Wurmus
e623b114d2
gnu: r-amountain: Update to 1.30.0.
* gnu/packages/bioconductor.scm (r-amountain): Update to 1.30.0.

Change-Id: I17e8eedccc79be973bba942ffbfd8ce24d89e43e
2024-05-08 12:53:18 +02:00
Ricardo Wurmus
01e031f6c5
gnu: r-airpart: Update to 1.12.0.
* gnu/packages/bioconductor.scm (r-airpart): Update to 1.12.0.

Change-Id: Iea2277db96d4b8785e0a0199ca08256699c31777
2024-05-08 12:53:18 +02:00
Ricardo Wurmus
3a6e6347c2
gnu: r-aims: Update to 1.36.0.
* gnu/packages/bioconductor.scm (r-aims): Update to 1.36.0.

Change-Id: Iff2af60c0b6a0fc575d142a10f0156d520efd802
2024-05-08 12:53:17 +02:00
Ricardo Wurmus
73e16238c8
gnu: r-agimicrorna: Update to 2.54.0.
* gnu/packages/bioconductor.scm (r-agimicrorna): Update to 2.54.0.

Change-Id: I16294ff145be59bb5499ad16772cd4efe72347f2
2024-05-08 12:53:17 +02:00
Ricardo Wurmus
aa54d5f36f
gnu: r-adductomicsr: Update to 1.20.0.
* gnu/packages/bioconductor.scm (r-adductomicsr): Update to 1.20.0.

Change-Id: I048fb7fbc173ce6883d80ca097b75b69704e2750
2024-05-08 12:53:17 +02:00
Ricardo Wurmus
1406bc656a
gnu: r-agilp: Update to 3.36.0.
* gnu/packages/bioconductor.scm (r-agilp): Update to 3.36.0.

Change-Id: Iddd5266a7f88a3a8eae567151b14010433f98c61
2024-05-08 12:53:17 +02:00
Ricardo Wurmus
c30eaed62b
gnu: r-aggregatebiovar: Update to 1.14.0.
* gnu/packages/bioconductor.scm (r-aggregatebiovar): Update to 1.14.0.

Change-Id: I5a510e12942e9afcd29b52f89d737a8a5707e3be
2024-05-08 12:53:17 +02:00
Ricardo Wurmus
747c727c8f
gnu: r-agdex: Update to 1.52.0.
* gnu/packages/bioconductor.scm (r-agdex): Update to 1.52.0.

Change-Id: I2facf3bc4e3d504804fed3b42b26d6fce393ea3b
2024-05-08 12:53:17 +02:00
Ricardo Wurmus
fe2f93f9fc
gnu: r-affyrnadegradation: Update to 1.50.0.
* gnu/packages/bioconductor.scm (r-affyrnadegradation): Update to 1.50.0.

Change-Id: Iaa9846636b2cb4c1a303f5190be4d3e3f9ee9240
2024-05-08 12:53:17 +02:00
Ricardo Wurmus
4dc97b0c46
gnu: r-affyplm: Update to 1.80.0.
* gnu/packages/bioconductor.scm (r-affyplm): Update to 1.80.0.

Change-Id: I2c16761eb1ad8cb2ffc087f6b928686964157efd
2024-05-08 12:53:17 +02:00
Ricardo Wurmus
e5ab4f1dca
gnu: r-affylmgui: Update to 1.78.0.
* gnu/packages/bioconductor.scm (r-affylmgui): Update to 1.78.0.

Change-Id: If26c0573c98b3d1bab684127e969489ae0c8c51e
2024-05-08 12:53:17 +02:00
Ricardo Wurmus
8c028e21bc
gnu: r-affyilm: Update to 1.56.0.
* gnu/packages/bioconductor.scm (r-affyilm): Update to 1.56.0.

Change-Id: I118c3fc0040100233d79539d5f3c24836e882f4c
2024-05-08 12:53:17 +02:00
Ricardo Wurmus
32f127f915
gnu: r-affixcan: Update to 1.22.0.
* gnu/packages/bioconductor.scm (r-affixcan): Update to 1.22.0.

Change-Id: Idf8886497dfabcd10502a36aa002ba7a83e46938
2024-05-08 12:53:17 +02:00
Ricardo Wurmus
aa5177a090
gnu: r-adsplit: Update to 1.74.0.
* gnu/packages/bioconductor.scm (r-adsplit): Update to 1.74.0.

Change-Id: Ib471d6086dfc782ca4ce5efaa8d7f59e601d3e41
2024-05-08 12:53:17 +02:00
Ricardo Wurmus
128d0ead08
gnu: r-adimpute: Update to 1.14.0.
* gnu/packages/bioconductor.scm (r-adimpute): Update to 1.14.0.

Change-Id: I888c1281fe44b7877fe01ad10cbca63a30ba337c
2024-05-08 12:53:17 +02:00
Ricardo Wurmus
6a698c1162
gnu: r-adamgui: Update to 1.20.0.
* gnu/packages/bioconductor.scm (r-adamgui): Update to 1.20.0.

Change-Id: I16b63e3e98eddfe0e038b40062d38524881b8e41
2024-05-08 12:53:17 +02:00
Ricardo Wurmus
21b9cd0355
gnu: r-adam: Update to 1.20.0.
* gnu/packages/bioconductor.scm (r-adam): Update to 1.20.0.

Change-Id: I417244fa99e124a285fb020e758ba471d6620d4e
2024-05-08 12:53:17 +02:00
Ricardo Wurmus
e28ff2ed30
gnu: r-adacgh2: Update to 2.44.0.
* gnu/packages/bioconductor.scm (r-adacgh2): Update to 2.44.0.
[propagated-inputs]: Remove r-snapcgh.

Change-Id: I47c7a0d00d32cf71ec2f16844ab3a60d120cfc3f
2024-05-08 12:53:17 +02:00
Ricardo Wurmus
5d1d4936b1
gnu: r-absseq: Update to 1.58.0.
* gnu/packages/bioconductor.scm (r-absseq): Update to 1.58.0.

Change-Id: I9433d9307416e967a70587eee5b5d891c270f8ee
2024-05-08 12:53:17 +02:00
Ricardo Wurmus
1fdc5eba8a
gnu: r-abarray: Update to 1.72.0.
* gnu/packages/bioconductor.scm (r-abarray): Update to 1.72.0.

Change-Id: I207f652b0c5f6d9069de675f245f4fb471d560e9
2024-05-08 12:53:17 +02:00
Ricardo Wurmus
6dbc09c6d0
gnu: r-tximportdata: Update to 1.32.0.
* gnu/packages/bioconductor.scm (r-tximportdata): Update to 1.32.0.

Change-Id: If18a4d7d8b6877beedec24cb17a989e7485af8c8
2024-05-08 12:53:17 +02:00
Ricardo Wurmus
6332e4ed23
gnu: r-tcgabiolinksgui-data: Update to 1.24.0.
* gnu/packages/bioconductor.scm (r-tcgabiolinksgui-data): Update to 1.24.0.

Change-Id: Ie34a052ff74d193f7472ef25fa9fabf6dbbb19a7
2024-05-08 12:53:17 +02:00
Ricardo Wurmus
0148d18e4b
gnu: r-sesamedata: Update to 1.22.0.
* gnu/packages/bioconductor.scm (r-sesamedata): Update to 1.22.0.

Change-Id: I7b57169a24d3f210f9d5373d375c1fcdc8a32b76
2024-05-08 12:53:17 +02:00
Ricardo Wurmus
49912ae08e
gnu: r-parathyroidse: Update to 1.42.0.
* gnu/packages/bioconductor.scm (r-parathyroidse): Update to 1.42.0.

Change-Id: I1ee5d4eb8d2f511cd437851aa6fd17b23f85b548
2024-05-08 12:53:17 +02:00
Ricardo Wurmus
8c4929306f
gnu: r-curatedtcgadata: Update to 1.26.0.
* gnu/packages/bioconductor.scm (r-curatedtcgadata): Update to 1.26.0.

Change-Id: Ia96fe42b0b41043879cff80d99c56b48afb06e5b
2024-05-08 12:53:17 +02:00