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Author SHA1 Message Date
Ricardo Wurmus
6256322e6a
gnu: r-ggpubr: Update to 0.3.0. 
* gnu/packages/cran.scm (r-ggpubr): Update to 0.3.0.
[propagated-inputs]: Add r-rstatix and r-tibble.
 2020-05-12 19:44:29 +02:00
Ricardo Wurmus
220311606a
gnu: Add r-rstatix. 
* gnu/packages/cran.scm (r-rstatix): New variable.
 2020-05-12 19:44:29 +02:00
Ricardo Wurmus
eabf61651a
gnu: r-renv: Update to 0.10.0. 
* gnu/packages/cran.scm (r-renv): Update to 0.10.0.
[native-inputs]: Add r-knitr.
 2020-05-12 19:44:28 +02:00
Ricardo Wurmus
2d233de826
gnu: r-openxlsx: Update to 4.1.5. 
* gnu/packages/cran.scm (r-openxlsx): Update to 4.1.5.
[native-inputs]: Add r-knitr.
 2020-05-12 19:44:28 +02:00
Ricardo Wurmus
8747d75244
gnu: r-vim: Update to 6.0.0. 
* gnu/packages/cran.scm (r-vim): Update to 6.0.0.
[native-inputs]: Add r-knitr.
 2020-05-12 19:44:28 +02:00
Ricardo Wurmus
61bedfb4bd
gnu: r-pillar: Update to 1.4.4. 
* gnu/packages/cran.scm (r-pillar): Update to 1.4.4.
 2020-05-12 19:44:28 +02:00
Ricardo Wurmus
4d5ea7dded
gnu: r-vctrs: Update to 0.3.0. 
* gnu/packages/cran.scm (r-vctrs): Update to 0.3.0.
 2020-05-12 19:44:28 +02:00
Ricardo Wurmus
8a56012e0a
gnu: r-recipes: Update to 0.1.12. 
* gnu/packages/cran.scm (r-recipes): Update to 0.1.12.
 2020-05-12 19:44:28 +02:00
Ricardo Wurmus
5882b4eb4b
gnu: r-extremes: Update to 2.0-12. 
* gnu/packages/cran.scm (r-extremes): Update to 2.0-12.
 2020-05-12 19:44:28 +02:00
Ricardo Wurmus
52041fb70f
gnu: r-circlize: Update to 0.4.9. 
* gnu/packages/cran.scm (r-circlize): Update to 0.4.9.
[native-inputs]: Add r-knitr.
 2020-05-12 19:44:28 +02:00
Ricardo Wurmus
f5b5e68844
gnu: r-pkgbuild: Update to 1.0.8. 
* gnu/packages/cran.scm (r-pkgbuild): Update to 1.0.8.
 2020-05-12 19:44:28 +02:00
Ricardo Wurmus
cc05222fe3
gnu: r-ps: Update to 1.3.3. 
* gnu/packages/cran.scm (r-ps): Update to 1.3.3.
 2020-05-12 19:44:28 +02:00
Ricardo Wurmus
62ee71a8c6
gnu: r-modelr: Update to 0.1.7. 
* gnu/packages/cran.scm (r-modelr): Update to 0.1.7.
 2020-05-12 19:44:28 +02:00
Ricardo Wurmus
527e59e3f6
gnu: r-scales: Update to 1.1.1. 
* gnu/packages/cran.scm (r-scales): Update to 1.1.1.
 2020-05-12 19:44:18 +02:00
Leo Prikler
20710b911f
gnu: epiphany: Enable tests. 
* gnu/packages/gnome.scm (epiphany)[arguments]<#:tests?>: Drop it.
<#:phases>: Add disable-failing-tests and pre-check.
[inputs]: Add xorg-server-for-tests.

Signed-off-by: Kei Kebreau <kkebreau@posteo.net>
 2020-05-12 12:27:02 -04:00
Leo Prikler
68fdd2377c
gnu: epiphany: Update to 3.34.4. 
* gnu/packages/gnome.scm (epiphany): Update to 3.34.4.

Signed-off-by: Kei Kebreau <kkebreau@posteo.net>
 2020-05-12 12:25:41 -04:00
Alex Sassmannshausen
14b9200412
gnu: guile-dsv: Update to 0.3.0. 
* gnu/packages/guile-xyz.scm (guile-dsv): Update to 0.3.0.
 2020-05-12 17:10:08 +02:00
nixo
a1315b7fdd
gnu: Add julia-compat. 
* gnu/packages/julia-xyz.scm: New file.
* gnu/local.mk: Add packages/julia-xyz.scm to it.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2020-05-12 15:32:06 +02:00
nixo
5ef30f2a1f
gnu: julia: Update to 1.4.1. 
* gnu/packages/julia.scm (julia): Update to 1.4.1.
* gnu/packages/julia.scm (julia-llvm): Update to 8.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2020-05-12 15:32:06 +02:00
nixo
174f5076bf
gnu: Add libwhich. 
* gnu/packages/julia.scm (libwhich): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2020-05-12 15:32:06 +02:00
nixo
3c125ac00e
gnu: julia: Fix patch. 
* gnu/packages/patches/julia-SOURCE_DATE_EPOCH-mtime.patch: replaced with
  actual patch.

It was a patch creating the patch.

Co-authored-by: Ludovic Courtès <ludo@gnu.org>
 2020-05-12 15:32:06 +02:00
nixo
4fc231a730
gnu: julia: Fix patch URL. 
* gnu/packages/julia.scm (julia-patch-url): Add ".patch".

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2020-05-12 15:32:06 +02:00
Ricardo Wurmus
09db2343f6
gnu: cuirass: Update to 0.0.1-30.9559fd1. 
* gnu/packages/ci.scm (cuirass): Update to 0.0.1-30.9559fd1.
 2020-05-12 14:24:04 +02:00
Ricardo Wurmus
bc950c2f7f
gnu: mumi: Update to 0.0.1-1.75d34d4. 
* gnu/packages/mail.scm (mumi): Update to 0.0.1-1.75d34d4.
[inputs]: Remove guile-debbugs and gnutls; replace guile-2.2 with guile-3.0.
 2020-05-12 14:05:21 +02:00
Ricardo Wurmus
cd23eb067e
gnu: guile-debbugs: Build with Guile 3.0. 
* gnu/packages/guile-xyz.scm (guile-debbugs)[native-inputs]: Replace guile-2.2
with guile-3.0.
 2020-05-12 12:33:46 +02:00
Ricardo Wurmus
66997dc0a2
gnu: guile-pfds: Remove obsolete build phase. 
* gnu/packages/guile-xyz.scm (guile-pfds)[arguments]: Remove
phase "work-around-guile-bug".
 2020-05-12 12:33:46 +02:00
Efraim Flashner
1268ddf815
gnu: terminology: Update to 1.7.0. 
* gnu/packages/enlightenment.scm (terminology): Update to 1.7.0.
 2020-05-12 10:43:53 +03:00
Efraim Flashner
7b6ca77aa7
gnu: evisum: Update to 0.4.1. 
* gnu/packages/enlightenment.scm (evisum): Update to 0.4.1.
 2020-05-12 10:28:26 +03:00
Ricardo Wurmus
24e38f24dd
gnu: guile-redis: Build with Guile 3.0. 
* gnu/packages/guile-xyz.scm (guile-redis)[native-inputs]: Replace guile-2.2
with guile-3.0.
(guile2.2-redis): New variable.
 2020-05-12 01:04:27 +02:00
Ricardo Wurmus
ca24b3fb45
gnu: guile-lens: Build with Guile 3.0. 
* gnu/packages/guile-xyz.scm (guile-lens)[native-inputs]: Replace guile-2.2
with guile-3.0.
(guile2.2-lens): New variable.
 2020-05-12 01:04:27 +02:00
Ricardo Wurmus
0a76d7a931
gnu: guile-webutils: Build with Guile 3.0. 
* gnu/packages/guile-xyz.scm (guile-webutils)[source]: Add snippet to patch
configure.ac.
[inputs]: Replace guile-2.2 with guile-3.0.
(guile2.2-webutils): New variable.
 2020-05-12 01:04:27 +02:00
Ricardo Wurmus
b01a73b029
gnu: guile-ncurses: Build with Guile 3.0. 
* gnu/packages/guile-xyz.scm (guile-ncurses)[inputs]: Replace guile-2.2 with
guile-3.0.
(guile3.0-ncurses): Deprecate in favor of guile-ncurses.
(guile2.2-ncurses): New variable.
 2020-05-12 01:04:27 +02:00
Ricardo Wurmus
eef5458387
gnu: guile-sjson: Build with Guile 3.0. 
* gnu/packages/guile-xyz.scm (guile-sjson)[source]: Add snippet to patch
configure file.
[inputs]: Replace guile-2.2 with guile-3.0.
(guile2.2-sjson): New variable.
 2020-05-12 01:04:27 +02:00
Marius Bakke
91be384d2e
gnu: Remove openimageio@1.7. 
* gnu/packages/graphics.scm (openimageio-1.7): Remove variable.
 2020-05-11 23:49:02 +02:00
Marius Bakke
9bfe94d71c
gnu: Remove boost@1.69. 
* gnu/packages/boost.scm (boost-1.69): Remove variable.
 2020-05-11 23:49:02 +02:00
Marius Bakke
977f478090
gnu: guix: Update to bdc801e1cf. 
* gnu/packages/package-management.scm (guix): Update to 1.1.0-4.bdc801e.
 2020-05-11 23:48:29 +02:00
Ludovic Courtès
8c97013ef5
news: Add entry for 'guix graph --path'. 
* etc/news.scm: Add entry.
 2020-05-11 23:31:23 +02:00
Ludovic Courtès
88a96c568c
guix graph: Add '--path'. 
* guix/scripts/graph.scm (display-path): New procedure.
(%options, show-help): Add '--path'.
(guix-graph): Handle it.
* tests/guix-graph.sh: Add tests.
* doc/guix.texi (Invoking guix graph): Document it.
(Invoking guix size): Mention it.
 2020-05-11 23:30:55 +02:00
Ludovic Courtès
36c2192414
graph: Add 'shortest-path'. 
* guix/graph.scm (shortest-path): New procedure.
* tests/graph.scm ("shortest-path, packages + derivations")
("shortest-path, reverse packages")
("shortest-path, references"): New tests.
 2020-05-11 23:30:55 +02:00
Ludovic Courtès
7240202136
graph: reference/referrer node types work with graph traversal. 
The graph traversal procedures in (guix graph) assume that nodes can be
compared with 'eq?', which was not the case for nodes of
%REFERENCE-NODE-TYPE and %REFERRER-NODE-TYPE (strings).

* guix/scripts/graph.scm (intern): New procedure.
(ensure-store-items, references*)
(%reference-node-type, non-derivation-referrers)
(%referrer-node-type): Use it on all store items.
* tests/graph.scm ("node-transitive-edges, references"): New test.
 2020-05-11 23:30:55 +02:00
Ludovic Courtès
c2b2c19a7b
doc: Mention xdot. 
* doc/guix.texi (Invoking guix graph): Mention xdot.  Remove a couple of
"| dot -Tpdf" in examples and add "| xdot".
(Invoking guix system): Likewise.
(Preparing to Use the Bootstrap Binaries): Likewise.
 2020-05-11 23:30:54 +02:00
Ludovic Courtès
647c57207a
tests: Test 'guix show' with multiple packages. 
* tests/guix-package-aliases.sh: Test 'guix show' with multiple packages.
 2020-05-11 23:30:54 +02:00
zimoun
baf1ce82b1
guix package, show: Support multiple queries. 
* guix/scripts/package.scm (process-query): Show multiple queries.
* guix/scripts/show.scm (guix-show): Reverse to display in order.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2020-05-11 23:30:54 +02:00
Marius Bakke
bdc801e1cf
gnu: waylandpp: Update to 0.2.7. 
* gnu/packages/freedesktop.scm (waylandpp): Update to 0.2.7.
 2020-05-11 21:55:02 +02:00
Marius Bakke
ab2454ce6a
gnu: wl-clipboard: Update to 2.0.0. 
* gnu/packages/xdisorg.scm (wl-clipboard): Update to 2.0.0.
[source](uri): Add "v" prefix in tag reference.
 2020-05-11 21:55:02 +02:00
Marius Bakke
56c8b524e3
gnu: capnproto: Update to 0.8.0. 
* gnu/packages/serialization.scm (capnproto): Update to 0.8.0.
 2020-05-11 21:55:02 +02:00
Marius Bakke
fc66a560ef
gnu: rng-tools: Update to 6.10. 
* gnu/packages/linux.scm (rng-tools): Update to 6.10.
[arguments]: Add --without-rtlsdr in #:configure-flags.
[inputs]: Add OPENSSL, which is no longer optional.
 2020-05-11 21:55:02 +02:00
Marius Bakke
a709af5853
gnu: lvm2: Update to 2.03.09. 
* gnu/packages/linux.scm (lvm2): Update to 2.03.09.
 2020-05-11 21:55:02 +02:00
Marius Bakke
b05a2f62d4
gnu: libsecret: Update to 0.20.3. 
* gnu/packages/gnome.scm (libsecret): Update to 0.20.3.
 2020-05-11 21:55:02 +02:00
Marius Bakke
28b55a5191
gnu: oniguruma: Do not build the static library. 
* gnu/packages/textutils.scm (oniguruma)[arguments]: New field.
 2020-05-11 21:55:02 +02:00