Christopher Baines
9b32bf6e6c
gnu: Fix and improve the mongo-tools package.
...
The hash of the source for this package is wrong. Most probably because the
source was changed from a tarball to a git repository without updating the
hash. Fixing this seems to break the check phase, so I rewrote that as well,
making changes to the build and install phases as needed.
* gnu/packages/databases.scm (mongo-tools)[source]: Update the hash value.
[arguments]: Remove the different unpack path, as this isn't necessary when
using the git repository as a source. Move the list of tools to make it
accessible from multiple phases. Rewrite the build phase, getting it to
install the tools in to the location the tests seem to expect to find
them. Replace the check phase to run the tests for each tool
individually. Add an install phase to install the tools, now that go install
is not being run in the build phase.
[native-inputs]: Add go-github.com-smartystreets-goconvey as a native-input
as this is required for running the tests.
2018-02-01 20:21:25 +00:00
Christopher Baines
33c88fcb25
gnu: Add mongo-tools.
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* gnu/packages/databases.scm (mongo-tools): New variable.
2018-01-30 07:41:31 +00:00
Christopher Baines
5807172300
gnu: Add go-gopkg.in-mgo.v2.
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* gnu/packages/databases.scm (go-gopkg.in-mgo.v2): New variable.
2018-01-30 07:41:30 +00:00
Tobias Geerinckx-Rice
bbf9092b9d
gnu: 4store: Update URI.
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* gnu/packages/databases.scm (4store)[source, home-page]: Update URI.
2018-01-26 00:09:19 +01:00
Efraim Flashner
8d7b476ba9
gnu: mongodb: Fix indentation.
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* gnu/packages/databases.scm (mongodb): Replace tabs with spaces.
2018-01-18 15:12:04 +02:00
Efraim Flashner
7f6a607e2a
gnu: mysql: Update to 5.7.21.
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* gnu/packages/databases.scm (mysql): Update to 5.7.21.
2018-01-18 15:12:02 +02:00
Christopher Baines
0076f5a98c
gnu: Remove redundant wrapping from packages using ruby-build-system.
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Now that the build system does wrapping automatically, it can be removed from
the packages that do it manually.
* gnu/packages/databases.scm (es-dump-restore)[arguments]: Remove #:phases.
* gnu/packages/ruby.scm (ruby-redcloth)[arguments]: Remove #:phases.
(ruby-httpclient)[arguments]: Remove 'wrap-bin-httpclient from the modified
phases.
2018-01-14 22:16:26 +00:00
Christopher Baines
3cb3fa6747
guix: build: ruby-build-system: Install to the vendor directory
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* guix/build/ruby-build-system.scm (install): Install gems to the vendor
directory, rather than the GEM_HOME. The vendor directory does not include
the version of ruby used to install the gem in the path, which makes it
easier to add it to the GEM_PATH for all versions of ruby to use.
(gem-home): Remove procedure.
* gnu/packages/ruby.scm (ruby, ruby-2.1)[native-search-paths]: Switch to
lib/ruby/vendor_ruby.
(ruby-1.8)[native-search-paths]: Remove native-search-paths.
(gem-directory): Remove procedure.
(ruby-ansi, ruby-ae)[arguments]: Remove use of gem-directory.
(ruby-metaclass, ruby-instantiator, ruby-introspection, ruby-mocha,
ruby-nokogiri, ruby-minitest-tu-shim, ruby-redcloth)[arguments]: Remove use
of gem-home.
(ruby-git, ruby-httpclient)[arguments]: Remove use of GEM_HOME.
* gnu/packages/databases.scm (es-dump-restore)[arguments]: Remove use of
GEM_HOME.
2018-01-14 22:16:08 +00:00
amirouche
3926a099b4
gnu: guile-wiredtiger: Update to 0.6.3.
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* gnu/package/databases.scm (guile-wiredtiger): Update to 0.6.3.
[arguments]: Enable tests; disable parallel tests; remove
'remove-bundled-dependencies' phase.
[synopsis, description]: Improve them.
Signed-off-by: Kei Kebreau <kkebreau@posteo.net>
2018-01-08 12:46:53 -05:00
Christopher Baines
90205b625e
gnu: Run some tests in the mongodb package check phase.
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Previously the mongodb dbtests and unittests were only built, and not actually
run.
* gnu/packages/databases.scm (mongodb)[native-inputs]: Add python2-minimal,
python2-pymongo and python2-pyyaml for running the resmoke.py program, and
add tzdata as some tests fail without this.
[arguments]: Run the tests through the resmoke.py script in the check phase,
set TZDIR as a couple of tests seem to depend on this, add a comment about
the resource requirements of the tests, as they require a large amount of
disk space, and disable the async_stream_test, as it seems to hang.
2017-12-27 13:28:34 +00:00
Christopher Baines
a469c69508
gnu: Build wiredtiger with builtin compressors.
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WiredTiger is used by MongoDB, and it seems to require it to be built with
builtin support for snappy compression.
* gnu/packages/databases.scm (wiredtiger)[arguments]: Replace --enable-zlib
and --enable-snappy with --with-builtins=snappy,zlib.
2017-12-27 13:28:24 +00:00
Tobias Geerinckx-Rice
53ae35e443
gnu: python-sqlalchemy-utils: Update to 0.32.21.
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* gnu/packages/databases.scm (python-sqlalchemy-utils): Update to 0.32.21.
2017-12-26 16:44:52 +01:00
Tobias Geerinckx-Rice
bcdc5caed7
gnu: python-sadisplay: Update to 0.4.8.
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* gnu/packages/databases.scm (python-sadisplay): Update to 0.4.8.
2017-12-26 16:43:57 +01:00
Tobias Geerinckx-Rice
a7f27da7f2
gnu: check, databases: Use HTTPS for bitbucket.org.
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* gnu/packages/check.scm (python-pytest-capturelog)[home-page]: Likewise.
* gnu/packages/databases.scm (python-alembic)[home-page]: Likewise.
2017-12-26 02:27:42 +01:00
Tobias Geerinckx-Rice
08455a3464
gnu: python-redis: Update to 2.10.6.
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* gnu/packages/databases.scm (python-redis): Update to 2.10.6.
2017-12-26 02:03:41 +01:00
Tobias Geerinckx-Rice
030274ccac
gnu: python-alembic: Update to 0.9.6.
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* gnu/packages/databases.scm (python-alembic): Update to 0.9.6.
2017-12-26 02:03:41 +01:00
Christopher Baines
3faa422d5f
gnu: Build wiredtiger with snappy support.
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This is probably necessary to get the MongoDB package in Guix to successfully
use the Guix wiredtiger package, as MongoDB it uses wiredtiger with snappy by
default.
* gnu/packages/databases.scm (wiredtiger)[arguments]: Add --enable-snappy to
#:configure-flags.
[inputs]: Add snappy.
2017-12-22 19:23:53 +00:00
Leo Famulari
0054564b85
gnu: mariadb: Update to 10.1.29.
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* gnu/packages/databases.scm (mariadb): Update to 10.1.29.
2017-12-22 10:53:50 -05:00
Efraim Flashner
439980b707
gnu: perl-sql-abstract: Update source uri.
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* gnu/packages/databases.scm (perl-sql-abstract)[source]: Update source uri.
2017-12-10 11:35:28 +02:00
Tobias Geerinckx-Rice
b10ac21511
gnu: perl-dbd-pg: Update to 3.7.0.
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* gnu/packages/databases.scm (perl-dbd-pg): Update to 3.7.0
2017-12-07 02:59:24 +01:00
Tobias Geerinckx-Rice
47b059197d
gnu: perl-sql-abstract: Update to 1.84.
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* gnu/packages/databases.scm (perl-sql-abstract): Update to 1.84
2017-12-07 02:59:24 +01:00
Tobias Geerinckx-Rice
b2b995622a
gnu: perl-dbix-class-schema-loader: Update to 0.07047.
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* gnu/packages/databases.scm (perl-dbix-class-schema-loader): Update to
0.07047
2017-12-07 02:59:17 +01:00
Tobias Geerinckx-Rice
84a0008ae7
gnu: perl-dbi: Update to 1.637.
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* gnu/packages/databases.scm (perl-dbi): Update to 1.637
2017-12-07 02:57:28 +01:00
Arun Isaac
6e385b76e6
gnu: mongodb: Use scons-build-system.
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* gnu/packages/databases.scm (mongodb): Switch to scons-build-system.
2017-11-30 18:21:23 +05:30
Efraim Flashner
51b0f09e05
gnu: mongodb: Remove some bundled sources.
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* gnu/packages/databases.scm (mongodb)[source]: Add snippet to remove
some of the bundled sources.
[input]: Remove unused boost input.
2017-11-26 14:16:08 +02:00
Efraim Flashner
319b52c382
gnu: mongodb: Use system wiredtiger when available.
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* gnu/packages/databases.scm (mongodb)[inputs]: Add wiredtiger on
64-bit systems.
[arguments]: When using wiredtiger, use system wiredtiger.
2017-11-26 14:16:08 +02:00
Efraim Flashner
29cfbfca43
gnu: mongodb: Build without wiredtiger on 32-bit systems.
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* gnu/packages/databases.scm (mongodb)[arguments]: Add a configure-flag
to build without wiredtiger support on 32-bit systems.
2017-11-26 14:16:04 +02:00
Leo Famulari
f1c49e75f4
gnu: mongodb: Update to 3.4.10.
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* gnu/packages/databases.scm (mongodb): Update to 3.4.10.
2017-11-25 20:28:11 -05:00
Danny Milosavljevic
41916bea1b
gnu: Add python-pyodbc.
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* gnu/packages/databases.scm (python-pyodbc, python2-pyodbc): New variables.
2017-11-20 20:47:59 +01:00
Ricardo Wurmus
a8714bf680
gnu: Move database packages from python.scm to databases.scm.
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* gnu/packages/python.scm (python-ccm, python2-ccm, python2-pysqlite,
python-sqlalchemy, python2-sqlalchemy, python-sqlalchemy-utils,
python2-sqlalchemy-utils, python-alembic, python2-alembic,
python-pickleshare, python2-pickleshare, python-apsw, python2-apsw,
python2-neo4j-driver, python2-py2neo, python-psycopg2, python2-psycopg2,
python-sadisplay, python2-sadisplay, python-mysqlclient,
python2-mysqlclient, python-hiredis, python2-hiredis, python-fakeredis,
python2-fakeredis, python-redis, python2-redis, python-rq, python2-rq,
python-trollius-redis, python2-trollius-redis, python-sqlparse,
python2-sqlparse, python-sql, python2-sql): Move from here...
* gnu/packages/databases.scm: ...to here.
* gnu/packages/tryton.scm,
gnu/packages/python-web.scm,
gnu/packages/nutrition.scm,
gnu/packages/medical.scm: Adjust accordingly.
2017-11-17 22:36:27 +01:00
Kristofer Buffington
1697307185
gnu: Add guile-wiredtiger.
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* gnu/packages/databases.scm (guile-wiredtiger): New variable.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2017-11-14 23:46:53 +01:00
Ricardo Wurmus
5ccde2079e
gnu: Move test packages from perl to perl-check.
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* gnu/packages/perl.scm (perl-test2-bundle-extended,
perl-test2-plugin-nowarnings, perl-test-base, perl-test-class,
perl-test-class-most, perl-test-cleannamespaces, perl-test-command,
perl-test-cpan-meta, perl-test-cpan-meta-json, perl-test-deep,
perl-test-differences, perl-test-directory, perl-test-eol,
perl-test-exception, perl-test-fatal, perl-test-file-sharedir-dist,
perl-test-files, perl-test-harness, perl-test-leaktrace,
perl-test-longstring, perl-test-manifest, perl-test-memory-cycle,
perl-test-mockobject, perl-test-mocktime, perl-test-most, perl-test-needs,
perl-test-notabs, perl-test-nowarnings, perl-test-number-delta,
perl-test-output, perl-test-pod, perl-test-pod-coverage, perl-test-requires,
perl-test-script, perl-test-sharedfork, perl-test-simple, perl-test-taint,
perl-test-tester, perl-test-trap, perl-test-utf8, perl-test-warn,
perl-test-warnings, perl-test-without-module, perl-test-writevariants,
perl-test-yaml, perl-test-trailingspace): Move variables to ...
* gnu/packages/perl-check.scm: ... this new file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add it.
* gnu/packages/admin.scm,
gnu/packages/bioinformatics.scm,
gnu/packages/crypto.scm,
gnu/packages/databases.scm,
gnu/packages/glib.scm,
gnu/packages/gnupg.scm,
gnu/packages/image-viewers.scm,
gnu/packages/language.scm,
gnu/packages/networking.scm,
gnu/packages/package-management.scm,
gnu/packages/perl.scm,
gnu/packages/terminals.scm,
gnu/packages/tex.scm,
gnu/packages/version-control.scm,
gnu/packages/web.scm,
gnu/packages/xml.scm,
gnu/packages/xorg.scm: Use perl-check module.
2017-11-13 23:03:01 +01:00
Efraim Flashner
179b7ac66d
gnu: postgresql@9.6: Update to 9.6.6 [security fixes].
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This fixes CVE-2017-12172, CVE-2017-15098, CVE-2017-15099.
* gnu/packages/databases.scm (postgresql@9.6): Update to 9.6.6.
2017-11-10 10:24:13 +02:00
Rutger Helling
1d8e73ba67
gnu: postgresql: Update to 10.1 [security fixes].
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Fixes CVE-2017-12172, CVE-2017-15098 and CVE-2017-15099.
* gnu/packages/databases.scm (postgresql): Update to 10.1.
Signed-off-by: Marius Bakke <mbakke@fastmail.com>
2017-11-10 01:22:53 +01:00
Ricardo Wurmus
74248d22a0
gnu: Add r-rmysql.
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* gnu/packages/databases.scm (r-rmysql): New variable.
2017-11-07 08:15:43 +01:00
Marius Bakke
aa70cf8c36
gnu: redis: Update to 4.0.2.
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* gnu/packages/databases.scm (redis): Update to 4.0.2.
2017-11-05 19:03:32 +01:00
Ricardo Wurmus
6a23c8b183
gnu: Add sqlite-with-fts3.
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* gnu/packages/databases.scm (sqlite-with-fts3): New variable.
Co-authored-by: Pierre Langlois <pierre.langlois@gmx.com>
2017-10-25 15:13:38 +02:00
Tobias Geerinckx-Rice
57af0d13b2
gnu: python-lmdb: Update to 0.93.
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* gnu/packages/databases.scm (python-lmdb): Update to 0.93.
2017-10-23 14:49:32 +02:00
Tobias Geerinckx-Rice
afd845368a
gnu: python-peewee: Update to 2.10.2.
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* gnu/packages/databases.scm (python-peewee): Update to 2.10.2.
2017-10-23 14:49:31 +02:00
Leo Famulari
48f8b07082
gnu: mysql: Update to 5.7.20.
...
* gnu/packages/databases.scm (mysql): Update to 5.7.20.
2017-10-20 15:36:42 -04:00
Efraim Flashner
7658d89bb7
gnu: Add postgresql@9.6.
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* gnu/packages/databases.scm (postgresql@9.6): New variable.
2017-10-12 23:39:35 +03:00
Marius Bakke
1c055d7258
Merge branch 'staging'
2017-10-10 21:44:32 +02:00
Rutger Helling
231123ee16
gnu: postgresql: Update to 10.0.
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* gnu/packages/databases.scm (postgresql): Update to 10.0.
Signed-off-by: Leo Famulari <leo@famulari.name>
2017-10-10 10:33:26 -04:00
Marius Bakke
ad3a937dae
Merge branch 'master' into staging
2017-10-07 12:54:40 +02:00
Christopher Baines
6bbbca9073
gnu: Add mongodb.
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* gnu/packages/databases.scm (mongodb): New variable.
2017-10-06 21:24:23 +01:00
Marius Bakke
7716ccd59c
Merge branch 'master' into staging
2017-10-05 00:45:38 +02:00
Efraim Flashner
48b68c6178
gnu: virtuoso-ose: Limit to 64-bit platforms.
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* gnu/packages/databases.scm (virtuoso-ose)[supported-systems]: New field.
2017-10-04 10:51:19 +03:00
Roel Janssen
61ce0998e0
gnu: Add virtuoso-ose.
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* gnu/packages/databases.scm (virtuoso-ose): New variable.
2017-10-03 15:36:05 +02:00
Christopher Baines
afcbb02057
gnu: Add ruby-es-dump-restore.
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* gnu/packages/databases.scm (es-dump-restore): New variable.
2017-09-30 11:46:10 +01:00
Marius Bakke
595dcd48a9
gnu: bdb: Update to 6.2.32.
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* gnu/packages/databases.scm (bdb): Update to 6.2.32.
2017-09-21 20:33:56 +02:00