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Author SHA1 Message Date
Tobias Geerinckx-Rice
5cfe650b9d
gnu: python-sqlalchemy: Use HTTPS home page. 
* gnu/packages/databases.scm (python-sqlalchemy)[home-page]: Use HTTPS.
 2019-03-12 02:22:35 +01:00
Tobias Geerinckx-Rice
6d04f694dc
gnu: python-sqlalchemy: Update to 1.3.1. 
* gnu/packages/databases.scm (python-sqlalchemy): Update to 1.3.1.
 2019-03-12 02:22:35 +01:00
Tobias Geerinckx-Rice
909404b571
gnu: python-sql: Update to 1.0.0. 
* gnu/packages/databases.scm (python-sql): Update to 1.0.0.
 2019-03-12 02:22:34 +01:00
Tobias Geerinckx-Rice
99e690a59a
gnu: python-pyodbc: Update to 4.0.25. 
* gnu/packages/databases.scm (python-pyodbc): Update to 4.0.25.
 2019-03-12 02:22:34 +01:00
Tobias Geerinckx-Rice
72b7de49b4
gnu: python-psycopg2: Update to 2.7.7. 
* gnu/packages/databases.scm (python-psycopg2): Update to 2.7.7.
 2019-03-12 02:22:34 +01:00
Tobias Geerinckx-Rice
d49bdbca5c
gnu: perl-dbd-sqlite: Update to 1.62. 
* gnu/packages/databases.scm (perl-dbd-sqlite): Update to 1.62.
 2019-03-12 02:22:34 +01:00
Tobias Geerinckx-Rice
49596a5413
gnu: perl-dbd-mysql: Update to 4.050. 
* gnu/packages/databases.scm (perl-dbd-mysql): Update to 4.050.
 2019-03-12 02:22:33 +01:00
Tobias Geerinckx-Rice
2f813be342
gnu: perl-sql-abstract: Update to 1.86. 
* gnu/packages/databases.scm (perl-sql-abstract): Update to 1.86.
 2019-03-12 02:22:33 +01:00
Marius Bakke
e74f153a10
gnu: Use OpenSSL 1.1 as the default OpenSSL package. 
* gnu/packages/tls.scm (openssl-next): Delete variable.  Move related code ...
(openssl) ... here.
(openssl-1.0): New public variable.  Retain old arguments.
* gnu/packages/crypto.scm (asignify)[inputs]: Change OPENSSL-NEXT to OPENSSL.
* gnu/packages/databases.scm (mariadb)[inputs]: Change from OPENSSL to OPENSSL-1.0.
* gnu/packages/node.scm (node)[inputs]: Likewise.
* gnu/packages/rust.scm (rust-1.19)[inputs]: Likewise.
 2019-03-10 18:49:59 +01:00
Marius Bakke
4f8dc1536a
Merge branch 'master' into staging 2019-03-04 22:31:59 +01:00
Marius Bakke
5ae458befc
gnu: rocksdb: Update to 5.18.3. 
* gnu/packages/databases.scm (rocksdb): Update to 5.18.3.
 2019-03-04 22:20:08 +01:00
Julien Lepiller
865c76ea3b
gnu: python-rq: Update to 0.13.0. 
* gnu/packages/databases.scm (python-rq): Update to 0.13.0.
 2019-03-04 21:52:33 +01:00
Julien Lepiller
dcbe674c86
gnu: python-redis: Update to 3.2.0. 
* gnu/packages/databases.scm (python-redis): Update to 3.2.0.
 2019-03-04 21:52:17 +01:00
Marius Bakke
97dcedbd2a
gnu: tdb: Update to 1.3.18. 
* gnu/packages/databases.scm (tdb): Update to 1.3.18.
[native-inputs]: Add WHICH.  Change PYTHON-2 to PYTHON.
 2019-03-02 22:21:15 +01:00
Marius Bakke
19464173ba
Merge branch 'master' into staging 2019-03-01 17:33:00 +01:00
Tobias Geerinckx-Rice
4915894759
gnu: lmdb: Update to 0.9.23. 
* gnu/packages/databases.scm (lmdb): Update to 0.9.23.
 2019-02-27 15:48:53 +01:00
Tobias Geerinckx-Rice
f167b432bb
gnu: lmdb: Don't use unstable tarball. 
* gnu/packages/databases.scm (lmdb)[source]: Use GIT-FETCH and
GIT-FILE-NAME.
[arguments]: Adjust source directory name.
 2019-02-27 15:48:53 +01:00
Marius Bakke
2c76e19df4
Merge branch 'master' into staging 2019-02-20 17:01:39 +01:00
Tobias Geerinckx-Rice
d84a20fb6b
gnu: memcached: Update to 1.5.12. 
* gnu/packages/databases.scm (memcached): Update to 1.5.12.
 2019-02-19 09:54:34 +01:00
Tobias Geerinckx-Rice
4cb2f29e3e
gnu: python-pymysql: Update to 0.9.3. 
* gnu/packages/databases.scm (python-pymysql): Update to 0.9.3.
 2019-02-19 09:53:41 +01:00
Tobias Geerinckx-Rice
2fc569a0fc
gnu: perl-db-file: Update to 1.843. 
* gnu/packages/databases.scm (perl-db-file): Update to 1.843.
 2019-02-19 09:53:41 +01:00
Marius Bakke
61506fe551
gnu: Remove unneeded uses of python{,2}-minimal. 
The "python-minimal" package exists mostly to resolve a dependency cycle.  To
reduce duplication, packages should prefer the regular Python variants.

* gnu/packages/admin.scm (htop)[native-inputs]: Change PYTHON-MINIMAL-WRAPPER
to PYTHON-WRAPPER.
* gnu/packages/crypto.scm (botan)[native-inputs]: Likewise.
* gnu/packages/bioinformatics.scm (sambamba)[native-inputs]: Change
PYTHON-MINIMAL to PYTHON.
* gnu/packages/dictionaries.scm (apertium)[native-inputs]: Likewise.
* gnu/packages/databases.scm (mongodb)[native-inputs]: Change PYTHON2-MINIMAL
to PYTHON2.
* gnu/packages/games.scm (openttd-opensfx, openttd-openmsx)[native-inputs]:
Likewise.
* gnu/packages/gnome.scm (deja-dup)[native-inputs]: Likewise.
 2019-02-17 18:44:18 +01:00
Leo Famulari
42ce9187fb
gnu: PostgreSQL 9.6: Update to 9.6.12. 
* gnu/packages/databases.scm (postgresql-9.6): Update to 9.6.12.
 2019-02-14 14:46:32 -05:00
Leo Famulari
2950d33c6c
gnu: PostgreSQL: Update to 10.7. 
* gnu/packages/databases.scm (postgresql): Update to 10.7.
 2019-02-14 14:46:28 -05:00
Marius Bakke
6901878894
Merge branch 'master' into staging 2019-02-14 00:20:28 +01:00
Tobias Geerinckx-Rice
da93d42413
gnu: perl-dbi: Update to 1.642. 
* gnu/packages/databases.scm (perl-dbi): Update to 1.642.
 2019-02-12 17:38:21 +01:00
Tobias Geerinckx-Rice
245e7a68e7
gnu: kyotocabinet: Update to 1.2.77. 
* gnu/packages/databases.scm (kyotocabinet): Update to 1.2.77.
 2019-02-12 17:38:21 +01:00
Christopher Baines
8b7e6d005e
gnu: postgresql: Build with openssl support. 
* gnu/packages/databases.scm (postgresql)[arguments]: Add --with-openssl to
[inputs]: Add openssl.
 2019-02-11 09:52:08 +00:00
Marius Bakke
0ce64334e6
gnu: mariadb: Update to 10.1.38. 
* gnu/packages/databases.scm (mariadb): Update to 10.1.38.
 2019-02-10 21:04:23 +01:00
Marius Bakke
69fb26d4f5
gnu: mariadb: Add comments about failing tests. 
* gnu/packages/databases.scm (mariadb): Add comments.
 2019-02-06 23:30:34 +01:00
Marius Bakke
0747328e31
Merge branch 'master' into staging 2019-01-31 23:32:56 +01:00
Ricardo Wurmus
aeec4a8fc1
gnu: python-sqlalchemy: Use PYPI-URI. 
* gnu/packages/databases.scm (python-sqlalchemy)[source]: Use PYPI-URI.
 2019-01-25 23:18:55 +01:00
Carl Dong
38f77be464
gnu: mariadb: Disable sporadically failing tests. 
* guix/packages/databases.scm: Disable sporadically failing tests.

Signed-off-by: Eric Bavier <bavier@member.fsf.org>
 2019-01-22 21:42:52 -06:00
Ludovic Courtès
3e2d4e69c3
Merge branch 'master' into staging 2019-01-20 22:12:10 +01:00
Ricardo Wurmus
255d1bbe77
gnu: Move dbm databases to new module. 
* gnu/packages/databases.scm (gdbm, bdb, bdb-5.3): Move from here...
* gnu/packages/dbm.scm: ...to this new module.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add it.
* gnu/packages/audio.scm,
gnu/packages/avahi.scm,
gnu/packages/backup.scm,
gnu/packages/cobol.scm,
gnu/packages/cyrus-sasl.scm,
gnu/packages/databases.scm,
gnu/packages/finance.scm,
gnu/packages/game-development.scm,
gnu/packages/gnome.scm,
gnu/packages/guile.scm,
gnu/packages/ibus.scm,
gnu/packages/kerberos.scm,
gnu/packages/linux.scm,
gnu/packages/mail.scm,
gnu/packages/man.scm,
gnu/packages/nvi.scm,
gnu/packages/openldap.scm,
gnu/packages/package-management.scm,
gnu/packages/php.scm,
gnu/packages/pulseaudio.scm,
gnu/packages/python.scm,
gnu/packages/rdf.scm,
gnu/packages/ruby.scm,
gnu/packages/sawfish.scm: Update module references.
 2019-01-16 16:08:22 +01:00
Ricardo Wurmus
cd0322a3ef
gnu: Move sqlite to separate module. 
* gnu/packages/databases.scm (sqlite, sqlite-3.26.0, sqlite-with-fts5,
sqlite-with-column-metadata): Move variables from here...
* gnu/packages/sqlite.scm: ...to this new module.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add it.
* gnu/packages/apl.scm,
gnu/packages/bittorrent.scm,
gnu/packages/calendar.scm,
gnu/packages/code.scm,
gnu/packages/crypto.scm,
gnu/packages/databases.scm,
gnu/packages/dc.scm,
gnu/packages/disk.scm,
gnu/packages/ebook.scm,
gnu/packages/education.scm,
gnu/packages/emacs.scm,
gnu/packages/emulators.scm,
gnu/packages/file-systems.scm,
gnu/packages/freedesktop.scm,
gnu/packages/ftp.scm,
gnu/packages/games.scm,
gnu/packages/geo.scm,
gnu/packages/gnome.scm,
gnu/packages/gnunet.scm,
gnu/packages/gnupg.scm,
gnu/packages/gnuzilla.scm,
gnu/packages/gps.scm,
gnu/packages/guile.scm,
gnu/packages/ibus.scm,
gnu/packages/kerberos.scm,
gnu/packages/kodi.scm,
gnu/packages/lisp.scm,
gnu/packages/mail.scm,
gnu/packages/messaging.scm,
gnu/packages/mpd.scm,
gnu/packages/music.scm,
gnu/packages/networking.scm,
gnu/packages/nfs.scm,
gnu/packages/ocaml.scm,
gnu/packages/package-management.scm,
gnu/packages/pdf.scm,
gnu/packages/photo.scm,
gnu/packages/php.scm,
gnu/packages/python.scm,
gnu/packages/qt.scm,
gnu/packages/ruby.scm,
gnu/packages/scheme.scm,
gnu/packages/sync.scm,
gnu/packages/syndication.scm,
gnu/packages/version-control.scm,
gnu/packages/video.scm,
gnu/packages/web-browsers.scm,
gnu/packages/webkit.scm: Adjust module references.
 2019-01-16 16:08:22 +01:00
Ricardo Wurmus
44d10b1f72
gnu: Separate Python core packages from the rest. 
* gnu/packages/python.scm: Move hundreds of package definitions from here...
* gnu/packages/python-xyz.scm: ...to this new module.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add it.
* gnu/packages/ada.scm,
gnu/packages/admin.scm,
gnu/packages/android.scm,
gnu/packages/audio.scm,
gnu/packages/backup.scm,
gnu/packages/benchmark.scm,
gnu/packages/bioinformatics.scm,
gnu/packages/bittorrent.scm,
gnu/packages/calendar.scm,
gnu/packages/check.scm,
gnu/packages/chemistry.scm,
gnu/packages/cluster.scm,
gnu/packages/compression.scm,
gnu/packages/connman.scm,
gnu/packages/crypto.scm,
gnu/packages/cups.scm,
gnu/packages/databases.scm,
gnu/packages/dav.scm,
gnu/packages/direct-connect.scm,
gnu/packages/disk.scm,
gnu/packages/django.scm,
gnu/packages/dlang.scm,
gnu/packages/docker.scm,
gnu/packages/ebook.scm,
gnu/packages/elf.scm,
gnu/packages/emacs.scm,
gnu/packages/emulators.scm,
gnu/packages/engineering.scm,
gnu/packages/enlightenment.scm,
gnu/packages/finance.scm,
gnu/packages/fltk.scm,
gnu/packages/fontutils.scm,
gnu/packages/freedesktop.scm,
gnu/packages/game-development.scm,
gnu/packages/games.scm,
gnu/packages/geo.scm,
gnu/packages/gl.scm,
gnu/packages/glib.scm,
gnu/packages/gnome.scm,
gnu/packages/gnupg.scm,
gnu/packages/gnuzilla.scm,
gnu/packages/graph.scm,
gnu/packages/graphics.scm,
gnu/packages/graphviz.scm,
gnu/packages/gtk.scm,
gnu/packages/ham-radio.scm,
gnu/packages/image-processing.scm,
gnu/packages/image-viewers.scm,
gnu/packages/image.scm,
gnu/packages/irc.scm,
gnu/packages/jrnl.scm,
gnu/packages/julia.scm,
gnu/packages/kde-frameworks.scm,
gnu/packages/key-mon.scm,
gnu/packages/libffi.scm,
gnu/packages/libreoffice.scm,
gnu/packages/libusb.scm,
gnu/packages/lirc.scm,
gnu/packages/logging.scm,
gnu/packages/machine-learning.scm,
gnu/packages/mail.scm,
gnu/packages/mate.scm,
gnu/packages/maths.scm,
gnu/packages/medical.scm,
gnu/packages/messaging.scm,
gnu/packages/monitoring.scm,
gnu/packages/mp3.scm,
gnu/packages/mpd.scm,
gnu/packages/music.scm,
gnu/packages/networking.scm,
gnu/packages/nutrition.scm,
gnu/packages/openldap.scm,
gnu/packages/openstack.scm,
gnu/packages/package-management.scm,
gnu/packages/password-utils.scm,
gnu/packages/patchutils.scm,
gnu/packages/pdf.scm,
gnu/packages/photo.scm,
gnu/packages/polkit.scm,
gnu/packages/protobuf.scm,
gnu/packages/python-crypto.scm,
gnu/packages/python-web.scm,
gnu/packages/qt.scm,
gnu/packages/rdf.scm,
gnu/packages/ruby.scm,
gnu/packages/search.scm,
gnu/packages/selinux.scm,
gnu/packages/serialization.scm,
gnu/packages/shells.scm,
gnu/packages/simulation.scm,
gnu/packages/ssh.scm,
gnu/packages/statistics.scm,
gnu/packages/storage.scm,
gnu/packages/sync.scm,
gnu/packages/terminals.scm,
gnu/packages/textutils.scm,
gnu/packages/time.scm,
gnu/packages/tls.scm,
gnu/packages/tor.scm,
gnu/packages/tryton.scm,
gnu/packages/version-control.scm,
gnu/packages/video.scm,
gnu/packages/virtualization.scm,
gnu/packages/vpn.scm,
gnu/packages/web-browsers.scm,
gnu/packages/web.scm,
gnu/packages/wicd.scm,
gnu/packages/xdisorg.scm,
gnu/packages/xorg.scm: Update module references.
 2019-01-15 14:46:44 +01:00
Efraim Flashner
0e28967250
Merge remote-tracking branch 'origin/master' into staging 2019-01-09 10:52:41 +02:00
Ricardo Wurmus
d9bec9a87b
gnu: r-rmysql: Move from databases.scm to cran.scm 
* gnu/packages/databases.scm (r-rmysql): Move from here...
* gnu/packages/cran.scm (r-rmysql): ...to here.
 2019-01-07 15:55:06 +01:00
Efraim Flashner
c007e35d24
gnu: recutils: Update to 1.8. 
* gnu/packages/databases.scm (recutils): Update to 1.8.
[source]: Remove snippet.
[arguments]: Remove custom 'set-bash4.4-header-location phase. Enable
parallel tests.
[inputs]: Move check ...
[native-inputs]: ... to here. Add pkg-config.
 2019-01-06 15:42:06 +02:00
Marius Bakke
f30830b2e6
Merge branch 'master' into staging 2018-12-22 15:26:30 +01:00
Alex Vong
38abef124b
gnu: sqlite: Replace with 3.26.0 [security fixes]. 
Fixes <https://bugs.gnu.org/33751>.
Reported by Marius Bakke <mbakke@fastmail.com>.

* gnu/packages/databases.scm (sqlite-3.26.0): New public variable.
(sqlite)[replacement]: Use it.
(sqlite-with-fts5): Use 'package/inherit'.
(sqlite-with-column-metadata): Likewise.

Modified-by: Mark H Weaver <mhw@netris.org>
 2018-12-18 20:20:16 -05:00
Marius Bakke
fbb7b04a85
Merge branch 'master' into staging 2018-12-09 00:18:32 +01:00
Christopher Baines
fe5969656a
gnu: mongo-tools: Fix build. 
I guess this broke when upgrading go. I did try upgrading to the later patch
and minor releases, but they had similar problems, so lets upgrade separately.

* gnu/packages/databases.scm (mongo-tools)[arguments]: Add patch-source phase.
 2018-12-04 20:27:04 +00:00
Marius Bakke
99f63f011d
Merge branch 'master' into staging 2018-12-03 19:15:17 +01:00
Marius Bakke
25ca46985c
Merge branch 'master' into core-updates 2018-11-29 15:56:49 +01:00
Brett Gilio
682c291899
gnu: sqlcipher: Update to 3.4.2. 
* gnu/packages/databases.scm (sqlcipher): Update to 3.4.2.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2018-11-24 22:40:46 +01:00
Marius Bakke
52b24ba495
gnu: mariadb: Update to 10.1.37 [security fixes]. 
This release fixes CVE-2018-3282, CVE-2018-3174, CVE-2018-3143, CVE-2018-3156,
and CVE-2018-3251.  See
<https://mariadb.com/kb/en/library/mariadb-10137-release-notes/> for details.

* gnu/packages/databases.scm (mariadb): Update to 10.1.37.
 2018-11-24 02:03:12 +01:00
Mark H Weaver
96272e2822
gnu: databases: Return #t from all phases. 
* gnu/packages/databases.scm (4store, go-gopkg.in-mgo.v2, mongodb)
(sparql-query, tdb, sqlcipher, python-sqlparse, mongo-tools): Return #t from
all phases, use invoke where appropriate, and remove vestigial plumbing.
 2018-11-14 23:44:16 -05:00
Marius Bakke
79ee97a144
Merge branch 'master' into core-updates 2018-11-14 21:20:46 +01:00
Leo Famulari
ec35067631
gnu: PostgreSQL: Update to 10.6 [fixes CVE-2018-16850]. 
* gnu/packages/databases.scm (postgresql): Update to 10.6.
 2018-11-11 14:10:03 -05:00
Efraim Flashner
22d04ceda0
gnu: python-rq: Update to 0.12.0. 
* gnu/packages/databases.scm (python-rq): Update to 0.12.0.
 2018-11-11 11:54:28 +02:00
Efraim Flashner
c92d056a8b
gnu: python-alembic: Update to 1.0.2. 
* gnu/packages/databases.scm (python-alembic, python2-alembic): Update
to 1.0.2.
 2018-11-11 11:13:53 +02:00
Ricardo Wurmus
f1f1cebdd3
gnu: mdbtools: Fetch sources from git. 
* gnu/packages/databases.scm (mdbtools)[source]: Fetch from git.
 2018-11-11 10:09:54 +01:00
Ricardo Wurmus
f626b71923
gnu: mdbtools: Remove custom bootstrap phase. 
* gnu/packages/databases.scm (mdbtools)[arguments]: Remove.
 2018-11-11 10:05:56 +01:00
Marius Bakke
64461ba20a
Merge branch 'master' into core-updates 2018-11-09 17:02:08 +01:00
Leo Famulari
41d2b7f50b
gnu: PostgreSQL 9: Update to 9.6.11 [fixes CVE-2018-16850]. 
* gnu/packages/databases.scm (postgresql-9.6): Update to 9.6.11.
 2018-11-08 13:42:56 -05:00
Marius Bakke
e2568df74e
gnu: rocksdb: Update to 5.15.10. 
* gnu/packages/databases.scm (rocksdb): Update to 5.15.10.
 2018-11-07 16:06:56 +01:00
Marius Bakke
8dd3665883
gnu: rocksdb: Don't use unstable tarball. 
* gnu/packages/databases.scm (rocksdb)[source]: Use GIT-FETCH.
 2018-11-07 16:06:56 +01:00
Marius Bakke
f4a5faa9dc
Merge branch 'master' into core-updates 2018-11-05 23:56:22 +01:00
Efraim Flashner
d28af1991a
gnu: qt: Use system sqlite. 
* gnu/packages/databases.scm (sqlite-with-column-metadata): New
variable.
* gnu/packages/qt.scm (qt, qtbase)[source]: Remove bundled sqlite.
[inputs]: Add sqlite-with-column-metadata.
[arguments]: Add configure-flag to use system sqlite.
 2018-10-28 09:51:25 +02:00
Tobias Geerinckx-Rice
d9bcdfce29
gnu: mongodb: Use INVOKE. 
* gnu/packages/databases.scm (mongodb)[arguments]: Substitute INVOKE for
SYSTEM*.
 2018-10-24 04:56:23 +02:00
Marius Bakke
ffddb42d6c
Merge branch 'master' into core-updates 2018-10-21 18:06:02 +02:00
Amirouche
b1e6b93805
gnu: guile-wiredtiger: Update to 0.7.0. 
* gnu/packages/databases.scm (guile-wiredtiger): Update to 0.7.0.
[inputs]: Replace wiredtiger with wiredtiger-3
[propagated-inputs]: Remove guile-lib, add guile-bytestructures
[description]: Update it.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2018-10-19 18:28:57 +02:00
Amirouche
4680fef705
gnu: Add wiredtiger 3.1.0 
* gnu/packages/databases.scm (wiredtiger-3): New variable that inherits from
  wiredtiger

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2018-10-19 18:28:57 +02:00
Marius Bakke
d02bb02f7d
Merge branch 'master' into core-updates 2018-10-17 20:47:11 +02:00
Tobias Geerinckx-Rice
f825faa502
gnu: python-pickleshare: Update to 0.7.5. 
* gnu/packages/databases.scm (python-pickleshare): Update to 0.7.5.
 2018-10-10 23:49:13 +02:00
Marius Bakke
cf6db76d2a
Merge branch 'master' into core-updates 2018-10-05 19:15:39 +02:00
Julien Lepiller
c336567dad
gnu: postgresql: Fix finding extensions. 
* gnu/packages/patches/postgresql-disable-resolve_symlinks.patch: New
file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/databases.scm (postgresql)[source]: Use it.
 2018-10-04 22:26:02 +02:00
Ludovic Courtès
944a3a8b8e
gnu: recutils: Adjust Gnulib to libc 2.28. 
Fixes <https://bugs.gnu.org/32776>.

* gnu/packages/databases.scm (recutils)[modules, snippet]: New fields.
 2018-10-03 15:23:56 +02:00
Tobias Geerinckx-Rice
a4764ff00a
gnu: python-fakeredis: Edit description. 
* gnu/packages/databases.scm (python-fakeredis)[description]:
Fix (upstream) typo. Get carried away.
 2018-09-28 00:01:43 +02:00
Marius Bakke
6a0427af6c
Merge branch 'master' into core-updates 2018-09-26 01:11:32 +02:00
Tobias Geerinckx-Rice
eeecbe09cc
gnu: perl-dbd-mysql: Update to 4.048. 
* gnu/packages/databases.scm (perl-dbd-mysql): Update to 4.048.
 2018-09-21 10:25:31 +02:00
Leo Famulari
d763940711
Merge branch 'master' into core-updates 2018-09-13 13:32:39 -04:00
Tobias Geerinckx-Rice
702a87f2d1
gnu: perl-dbd-mysql: Update to 4.047. 
* gnu/packages/databases.scm (perl-dbd-mysql): Update to 4.047.
[arguments]: Add 'skip-library-detection' phase.
 2018-09-11 21:03:07 +02:00
Marius Bakke
4333d48a82
gnu: mariadb: Move unbundle substitutions to source snippet. 
* gnu/packages/databases.scm (mariadb)[source](snippet): Add two substitutions
from ...
[arguments]: The 'unbundle' phase here.  Rename to 'fix-pcre-detection.
 2018-09-09 17:59:37 +02:00
Marius Bakke
1d957c79b6
gnu: mariadb: Update to 10.1.36. 
* gnu/packages/databases.scm (mariadb): Update to 10.1.36.
[arguments]: Disable one new test.
 2018-09-09 17:59:36 +02:00
Marius Bakke
839167ff9d
Merge branch 'staging' into core-updates 2018-08-25 16:44:07 +02:00
Marius Bakke
173d291466
Merge branch 'master' into staging 2018-08-25 16:38:51 +02:00
Ludovic Courtès
444488fc1b
gnu: boost: Move 1.59.0 definition to boost.scm. 
Fixes a regression introduced in commit
7cbf06d8c2 where the top-level code of
these two modules would depend on each other, leading to "boost: unbound
variable" kind of errors in some circumstances.

* gnu/packages/databases.scm (boost-for-mysql): Move to...
* gnu/packages/boost.scm (boost-for-mysql): ... here.  Make public and
add 'properties' field.
 2018-08-24 00:36:04 +02:00
Leo Famulari
58927996d9
gnu: perl-dbd-mysql: Update to 4.046. 
* gnu/packages/databases.scm (perl-dbd-mysql): Update to 4.046.
[source]: Update URL. Remove 'perl-dbd-mysql-CVE-2017-10788.patch'.
* gnu/packages/patches/perl-dbd-mysql-CVE-2017-10788.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
 2018-08-22 15:40:08 -04:00
Marius Bakke
233df51ebc
Merge branch 'master' into staging 2018-08-22 18:14:04 +02:00
Marius Bakke
fb76ef8477
gnu: Remove GCC ICE workarounds. 
* gnu/packages/patches/doxygen-gcc-ice.patch,
gnu/packages/patches/mariadb-gcc-ice.patch,
gnu/packages/patches/perf-gcc-ice.patch: Delete files
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
* gnu/packages/databases.scm (mariadb)[source](patches): Likewise.
* gnu/packages/linux.scm (perf)[source](patches): Likewise.
* gnu/packages/documentation.scm (doxygen)[inputs, arguments]: Likewise.
 2018-08-22 18:01:09 +02:00
Marius Bakke
43cec3fb1e
gnu: mariadb: Remove huge mysql_embedded executable. 
* gnu/packages/databases.scm (mariadb)[arguments]: Adjust deletion regex.
 2018-08-22 17:52:40 +02:00
Marius Bakke
22f5c07624
gnu: mariadb: Propagate OpenSSL. 
* gnu/packages/databases.scm (mariadb)[inputs]: Move OPENSSL ...
[propagated-inputs]: ... here.
(r-rmysql)[inputs]: Remove OPENSSL.
 2018-08-22 17:50:07 +02:00
Tobias Geerinckx-Rice
311f06c94a
gnu: Add sqlcrush. 
* gnu/packages/databases.smc (sqlcrush): New public variable.
 2018-08-22 00:03:43 +02:00
Tobias Geerinckx-Rice
9763102bd7
gnu: Add python-pymysql. 
* gnu/packages/databases.scm (python-pymysql, python2-pymysql): New
public variables.
 2018-08-22 00:03:43 +02:00
Marius Bakke
fdb222033c
gnu: gdbm: Update to 1.18. 
* gnu/packages/databases.scm (gdbm): Update to 1.18.
 2018-08-21 17:25:23 +02:00
Marius Bakke
2be1b754ba
gnu: python-sqlalchemy: Update to 1.2.11. 
* gnu/packages/databases.scm (python-sqlalchemy): Update to 1.2.11.
 2018-08-21 17:24:30 +02:00
Marius Bakke
9871a896aa
gnu: python-sqlalchemy: Use 'invoke'. 
* gnu/packages/databases.scm (python-sqlalchemy)[arguments]: Use INVOKE
instead of SYSTEM*.
 2018-08-21 17:24:30 +02:00
Tobias Geerinckx-Rice
8327ffcc7f
gnu: unixodbc: Update to 2.3.7. 
* gnu/packages/databases.scm (unixodbc): Update to 2.3.7.
 2018-08-21 07:04:05 +02:00
Tobias Geerinckx-Rice
8ecf3f7ea5
gnu: mysql: Update to 5.7.23. 
* gnu/packages/databases.scm (mysql): Update to 5.7.23.
 2018-08-20 20:17:20 +02:00
Tobias Geerinckx-Rice
7cbf06d8c2
gnu: mysql: Fix build. 
MySQL demands boost@1.59.0, and lying about it no longer works:

sql/item_geofunc_internal.cc: In function ‘void handle_gis_exception(const char*)’:
sql/item_geofunc_internal.cc:37:81: error: expected unqualified-id before ‘&’ token
   catch (const boost::geometry::detail::self_get_turn_points::self_ip_exception &)
                                                                                 ^
[...]

* gnu/packages/databases.scm (boost-for-mysql): New variable.
(mysql)[inputs]: Use that instead of the regular boost.
[arguments]: Remove now-unnecessary ‘patch-boost-version’ phase.
 2018-08-20 20:17:20 +02:00
Tobias Geerinckx-Rice
725449bd7a
gnu: python-pyodbc: Update to 4.0.24. 
* gnu/packages/databases.scm (python-pyodbc): Update to 4.0.24.
 2018-08-20 20:17:19 +02:00
Tobias Geerinckx-Rice
28635e5266
gnu: python-mysqlclient: Update to 1.3.13. 
* gnu/packages/databases.scm (python-mysqlclient): Update to 1.3.13.
 2018-08-20 20:17:19 +02:00
Tobias Geerinckx-Rice
db4e76416c
gnu: perl-dbd-sqlite: Update to 1.58. 
* gnu/packages/databases.scm (perl-dbd-sqlite): Update to 1.58.
 2018-08-20 20:17:19 +02:00
Roel Janssen
e63da346cf
gnu: Update virtuoso-ose to 7.2.5. 
* gnu/packages/databases.scm (virtuoso-ose): Update to 7.2.5.
 2018-08-20 16:13:45 +02:00
Marius Bakke
df570bf271
Merge branch 'master' into staging 2018-08-16 20:56:38 +02:00
Marius Bakke
0a1f520d40
gnu: r-rmysql: Add missing dependency on OpenSSL. 
* gnu/packages/databases.scm (r-rmysql)[inputs]: Add OPENSSL.
 2018-08-16 17:39:10 +02:00
Tobias Geerinckx-Rice
7fe3a57ac5
gnu: mysql: Use HTTPS. 
* gnu/packages/databases.scm (mysql)[source, home-page]: Use HTTPS.
 2018-08-16 00:58:27 +02:00
Pierre Langlois
7bcc34050b
gnu: clementine: Fix creating initial database. 
It seems a recent version of sqlite broke Clementine's first startup. It turns
out we can patch clementine to fix the problem instead of providing a different
sqlite package:
<https://github.com/clementine-player/Clementine/pull/5669>

* gnu/packages/databases.scm (sqlite-with-fts3): Remove.
* gnu/packages/music.scm (clementine)[inputs]: Replace sqlite-with-fts3 with
sqlite.
[source]: Add clementine-fix-sqlite.patch.
* gnu/packages/patches/clementine-fix-sqlite.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2018-08-15 14:29:56 -04:00
Tobias Geerinckx-Rice
34ba1b8fc5
gnu: perl-db-file: Update to 1.842. 
* gnu/packages/databases.scm (perl-db-file): Update to 1.842.
 2018-08-15 00:32:15 +02:00
Tobias Geerinckx-Rice
61d996b921
gnu: memcached: Fix typos in description. 
* gnu/packages/databases.scm (memcached)[synopsis, description]:
Hyphenate.
 2018-08-15 00:30:04 +02:00
Tobias Geerinckx-Rice
b432c05203
gnu: memcached: Update to 1.5.10. 
* gnu/packages/databases.scm (memcached): Update to 1.5.10.
 2018-08-14 15:54:31 +02:00
Ricardo Wurmus
b86c019efb
Merge branch 'staging' into core-updates 2018-08-13 20:39:32 +02:00
Tobias Geerinckx-Rice
9aba9b1278
Migrate search.cpan.org home pages to metacpan.org. 
The venerable search.cpan.org has retired[0].

[0]: https://log.perl.org/2018/05/goodbye-search-dot-cpan-dot-org.html

* guix/import/cpan.scm (cpan-home): Generate metacpan.org home page URIs.
Update all previously generated ones in (gnu packages) to their
canonical new homes.
 2018-08-11 17:22:31 +02:00
Marius Bakke
369d15674c
gnu: mariadb: Update to 10.1.35 [security fixes]. 
This release fixes CVE-2018-3058, CVE-2018-3063, CVE-2018-3064 and CVE-2018-3066.
See <https://mariadb.com/kb/en/library/mariadb-10135-release-notes/> for details.

* gnu/packages/databases.scm (mariadb): Update to 10.1.35.
 2018-08-10 15:23:50 +02:00
Marius Bakke
516fe8deb5
gnu: postgresql: Update to 10.5 [fixes CVE-2018-10915, CVE-2018-10925]. 
* gnu/packages/databases.scm (postgresql): Update to 10.5.
 2018-08-10 15:23:50 +02:00
Efraim Flashner
62694caa44
gnu: mariadb: Remove test which fails on armhf-linux. 
* gnu/packages/databases.scm (mariadb)[arguments]: Disable test
'mroonga/storage.index_read_multiple_double'.
 2018-08-07 19:55:33 +03:00
Marius Bakke
71179b35b8
gnu: mariadb: Further increase test timeouts. 
* gnu/packages/databases.scm (mariadb)[arguments]: Allow 40 minutes for single
tests, and 600 in total.
 2018-08-07 13:41:08 +02:00
Marius Bakke
3418e43bf5
gnu: mariadb: Adjust to test failures on Hydra. 
* gnu/packages/patches/mariadb-client-test-32bit.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
* gnu/packages/databases.scm (mariadb)[source](patches): Add it.
[arguments]: Increase retry count and test timeout.  Disable test
main.myisampack.
 2018-08-07 00:51:48 +02:00
Marius Bakke
4214066d45
Merge branch 'master' into core-updates 2018-08-01 15:53:17 +02:00
Marius Bakke
869250809b
Merge branch 'master' into staging 2018-07-30 18:08:28 +02:00
Ben Woodcroft
19601e895b
gnu: python2-psycopg2: Update to 2.7.5. 
* gnu/packages/bioinformatics.scm (python2-psycopg2): Update to 2.7.5.
 2018-07-29 22:53:10 +10:00
Marius Bakke
0333582477
gnu: mariadb: Move GCC ICE patch to the usual location. 
* gnu/packages/databases.scm (mariadb)[source](patches): New field.
[arguments]: Don't disable semisync plugin.
[inputs]: Remove 'mariadb-gcc-ice.patch'.
 2018-07-28 18:37:37 +02:00
Marius Bakke
1af575f04d
Merge branch 'master' into staging 2018-07-28 18:34:59 +02:00
Ludovic Courtès
5193ae64ca
gnu: mariadb: Work around GCC ICE on armhf-linux. 
* gnu/packages/patches/mariadb-gcc-ice.patch: New file.
* gnu/packages/databases.scm (mariadb)[arguments]: Conditionally add
'apply-patch' phase.
[native-inputs]: Conditionally add "gcc-ice-patch" input.
 2018-07-28 15:08:07 +02:00
Marius Bakke
963157f1cc
gnu: mariadb: Delete test files and static libraries. 
* gnu/packages/databases.scm (mariadb)[arguments]: Adapt 'post-install' phase
  to purge static archives and test executables.
 2018-07-26 14:38:03 +02:00
Marius Bakke
2001d2dac4
gnu: mariadb: Remove some bundled libraries. 
* gnu/packages/databases.scm (mariadb)[source](snippet, modules): New fields.
[arguments]: Add explicit #:configure-flags for system libraries.  Add
'unbundle' phase.  Remove 'pre-configure' phase.
[inputs]: Add SNAPPY and XZ.
 2018-07-26 14:38:03 +02:00
Marius Bakke
03aed90b86
gnu: mariadb: Update to 10.1.34. 
* gnu/packages/databases.scm (mariadb): Update to 10.1.34.
 2018-07-26 14:38:02 +02:00
Marius Bakke
3869f39e6d
gnu: mariadb: Run the full test suite. 
* gnu/packages/databases.scm (mariadb)[arguments]: Override 'check' phase.
Add phase 'adjust-tests'.  Disable one more plugin.
[properties]: New field.
 2018-07-26 14:38:02 +02:00
Marius Bakke
5b4d2e40f1
gnu: mariadb: Disable plugin that fails on armhf. 
* gnu/packages/databases.scm (mariadb)[arguments]: Add 'disable-plugins' phase.
 2018-07-26 14:38:02 +02:00
Marius Bakke
4c27ea06d4
gnu: mariadb: Install pkg-config file to a standard location. 
* gnu/packages/databases.scm (mariadb)[#:configure-flags]: Set
INSTALL_SHAREDIR to "share".
 2018-07-26 14:37:29 +02:00
Marius Bakke
706ae8e15c
Merge branch 'master' into core-updates 2018-07-24 19:56:35 +02:00
Efraim Flashner
97dd1b154b
gnu: postgresql@9.6: Update to 9.6.9. 
* gnu/packages/databases.scm (postgresql@9.6): Update to 9.6.9.
 2018-07-15 22:59:24 +03:00
Marius Bakke
9761aca95c
gnu: unixodbc: Update to 2.3.6. 
* gnu/packages/databases.scm (unixodbc): Update to 2.3.6.
 2018-07-13 00:51:06 +02:00
Marius Bakke
49b6dc2b4e
Merge branch 'staging' 2018-07-13 00:25:45 +02:00
Marius Bakke
b7a2d2d9a9
gnu: tdb: Update to 1.3.16. 
* gnu/packages/databases.scm (tdb): Update to 1.3.16.
 2018-07-12 17:21:16 +02:00
Efraim Flashner
cb9a84bd89
gnu: gdbm: Update to 1.16. 
* gnu/packages/databases.scm (gdbm): Update to 1.16.
 2018-07-03 10:43:06 +03:00
Ricardo Wurmus
f1728d4346
Merge branch 'master' into core-updates 2018-06-29 22:51:23 +02:00
Marius Bakke
4dfea1010a
Merge branch 'master' into staging 2018-06-21 15:52:26 +02:00
Tobias Geerinckx-Rice
cd0750fcf2
gnu: memcached: Update to 1.5.8. 
* gnu/packages/databases.scm (memcached): Update to 1.5.8.
 2018-06-20 04:56:33 +02:00
Marius Bakke
0106d6b40d
Merge branch 'master' into staging 2018-06-19 17:02:16 +02:00
Marius Bakke
793a66e5fe
gnu: redis: Update to 4.0.10 [fixes CVE-2018-11218, CVE-2018-11219]. 
* gnu/packages/databases.scm (redis): Update to 4.0.10.
 2018-06-19 15:54:49 +02:00
Marius Bakke
6969c4de44
Merge branch 'master' into staging 2018-06-18 15:29:38 +02:00
Tobias Geerinckx-Rice
f71619648c
gnu: perl-dbi: Update to 1.641. 
* gnu/packages/databases.scm (perl-dbi): Update to 1.641.
 2018-06-14 18:55:51 +02:00
Tobias Geerinckx-Rice
d30e9e6109
gnu: sqlite: Update to 3.24.0. 
* gnu/packages/databases.scm (sqlite): Update to 3.24.0.
 2018-06-12 15:06:23 +02:00
Marius Bakke
a032b4454b
Merge branch 'master' into staging 2018-06-11 23:52:15 +02:00
宋文武
cd8ece22bf
gnu: redis: Update to 4.0.9. 
* gnu/packages/database.scm (redis): Update to 4.0.9.
 2018-06-08 20:27:30 +08:00
Ricardo Wurmus
8709624756
Merge branch 'origin/core-updates-next' into core-updates 2018-06-06 23:01:48 +02:00
Ricardo Wurmus
116ca65b58
Merge branch 'master' into core-updates 2018-06-06 22:43:37 +02:00
Tobias Geerinckx-Rice
3b295d3f4b
gnu: python-lmdb: Update to 0.94. 
* gnu/packages/databases.scm (python-lmdb): Update to 0.94.
 2018-06-06 06:12:22 +02:00
Ricardo Wurmus
59f87b44da
Merge branch 'master' into core-updates 2018-05-31 13:23:49 +02:00
Ricardo Wurmus
ad016826c9
gnu: r-rmysql: Update to 0.10.15. 
* gnu/packages/databases.scm (r-rmysql): Update to 0.10.15.
 2018-05-31 13:21:31 +02:00
Efraim Flashner
d2dde99e99
gnu: mariadb: Update to 10.1.33. 
* gnu/packages/databases.scm (mariadb): Update to 10.1.33.
 2018-05-31 08:45:58 +03:00
Efraim Flashner
03d9031962
gnu: mariadb: Update to 10.1.33. 
* gnu/packages/databases.scm (mariadb): Update to 10.1.33.
 2018-05-30 22:46:31 +03:00
Tobias Geerinckx-Rice
1fbad3ad22
gnu: postgresql: Use INVOKE. 
* gnu/packages/databases.scm (postgresql)[arguments]: Substitute INVOKE for SYSTEM*.
 2018-05-24 23:59:14 +02:00
Tobias Geerinckx-Rice
7e0f04635b
gnu: postgresql: Update to 10.4 [fixes CVE-2018-1115]. 
* gnu/packages/databases.scm (postgresql): Update to 10.4.
 2018-05-24 23:59:14 +02:00
Mark H Weaver
f0ae90cbbb
Merge branch 'master' into core-updates 2018-04-30 16:48:15 -04:00
Tobias Geerinckx-Rice
1672e7e714
gnu: perl-dbix-class-schema-loader: Update to 0.07049. 
* gnu/packages/databases.scm (perl-dbix-class-schema-loader): Update to 0.07049.
 2018-04-30 21:36:11 +02:00
Tobias Geerinckx-Rice
435897c0f2
gnu: perl-dbix-class: Update to 0.082841. 
* gnu/packages/databases.scm (perl-dbix-class): Update to 0.082841.
 2018-04-30 21:36:10 +02:00
Marius Bakke
30d900d4ee
gnu: sqlite: Update to 3.23.1. 
* gnu/packages/databases.scm (sqlite): Update to 3.23.1.
 2018-04-30 20:48:55 +02:00
Mark H Weaver
3d5ad159b3
Merge branch 'master' into core-updates 2018-04-30 04:03:54 -04:00
Marius Bakke
8bf8dedc9a
gnu: rocksdb: Update to 5.12.4. 
* gnu/packages/databases.scm (rocksdb): Update to 5.12.4.
 2018-04-25 15:09:22 +02:00
Mark H Weaver
f89aa1521a
Merge branch 'master' into core-updates 2018-04-10 00:42:22 -04:00
Tobias Geerinckx-Rice
4bac91e1d8
gnu: perl-db-file: Update to 1.841. 
* gnu/packages/databases.scm (perl-db-file): Update to 1.841.
 2018-04-05 06:39:02 +02:00
Tobias Geerinckx-Rice
f560acf8d9
gnu: lmdb: Update to 0.9.22. 
* gnu/packages/databases.scm (lmdb): Update to 0.9.22.
 2018-04-05 06:39:01 +02:00
Roel Janssen
ea09f99f7f
gnu: 4store: Remove preprocessor directive. 
* gnu/packages/databases.scm (4store): Add patch to remove preprocessor
  directive.
* gnu/packages/patches/4store-unset-preprocessor-directive.patch: New file.
* gnu/local.mk: Register patch.
 2018-04-04 14:54:02 +02:00
Roel Janssen
6d09a7b5ec
gnu: virtuoso-ose: Unbundle zlib and build with readline support. 
* gnu/packages/databases.scm (virtuoso-ose):
  [inputs]: Add zlib, and readline;
  [arguments]: Add --without-internal-zlib, and --with-readline.
 2018-04-03 13:07:21 +02:00
Marius Bakke
bce2206021
gnu: sqlite: Update to 3.23.0. 
* gnu/packages/databases.scm (sqlite): Update to 3.23.0.
 2018-04-02 16:23:32 +02:00
Mark H Weaver
5114c83a24
gnu: bdb: Use invoke. 
* gnu/packages/databases.scm (bdb, bdb-5.3)[arguments]: Use invoke in the
custom configure phase.
 2018-03-25 05:01:32 -04:00
Mark H Weaver
2c48ed4e97
gnu: postgresql: Use invoke. 
* gnu/packages/databases.scm (postgresql)[arguments]: Use invoke in the
'build-contrib' and 'install-contrib' phases.
 2018-03-23 04:43:35 -04:00
Mark H Weaver
a0b06671c6
gnu: mysql: Return #t from all phases. 
* gnu/packages/databases.scm (mysql)[arguments]: Return #t from
the 'patch-boost-version' phase.
 2018-03-23 04:43:07 -04:00
Mark H Weaver
841ee2a878
gnu: mariadb: Return #t from all phases. 
* gnu/packages/databases.scm (mariadb)[arguments]: Return #t from
the 'post-install' phase.
 2018-03-23 04:42:55 -04:00
Mark H Weaver
ac21be848a
Merge branch 'master' into core-updates 2018-03-20 14:22:06 -04:00
ng0
4a78fd4617
Correct name and Email for ng0. 
* .mailmap: Correct name and Email for ng0.
* Makefile.am, doc/guix.texi, etc/completion/fish/guix.fish
gnu/packages/accessibility.scm, gnu/packages/admin.scm,
gnu/packages/audio.scm, gnu/packages/autotools.scm,
gnu/packages/cdrom.scm, gnu/packages/check.scm,
gnu/packages/cinnamon.scm, gnu/packages/compression.scm,
gnu/packages/crypto.scm, gnu/packages/databases.scm,
gnu/packages/django.scm, gnu/packages/dns.scm,
gnu/packages/emacs.scm, gnu/packages/enlightenment.scm,
gnu/packages/fonts.scm, gnu/packages/fontutils.scm,
gnu/packages/forth.scm, gnu/packages/fvwm.scm,
gnu/packages/games.scm, gnu/packages/gl.scm,
gnu/packages/gnome.scm, gnu/packages/gnunet.scm,
gnu/packages/gnupg.scm, gnu/packages/gnuzilla.scm,
gnu/packages/gtk.scm, gnu/packages/guile-wm.scm,
gnu/packages/guile.scm, gnu/packages/haskell-check.scm,
gnu/packages/haskell-crypto.scm, gnu/packages/haskell.scm,
gnu/packages/image-viewers.scm, gnu/packages/image.scm,
gnu/packages/irc.scm, gnu/packages/language.scm,
gnu/packages/libcanberra.scm, gnu/packages/linux.scm,
gnu/packages/lisp.scm, gnu/packages/lolcode.scm,
gnu/packages/lxde.scm, gnu/packages/lxqt.scm,
gnu/packages/mail.scm, gnu/packages/markup.scm,
gnu/packages/mate.scm, gnu/packages/maths.scm,
gnu/packages/mc.scm, gnu/packages/messaging.scm,
gnu/packages/music.scm, gnu/packages/ncurses.scm,
gnu/packages/networking.scm, gnu/packages/nickle.scm,
gnu/packages/openbox.scm, gnu/packages/pdf.scm,
gnu/packages/perl-check.scm, gnu/packages/perl.scm,
gnu/packages/python-crypto.scm, gnu/packages/python-web.scm,
gnu/packages/python.scm, gnu/packages/qt.scm,
gnu/packages/ruby.scm, gnu/packages/rust.scm,
gnu/packages/scheme.scm, gnu/packages/serialization.scm,
gnu/packages/shells.scm, gnu/packages/ssh.scm,
gnu/packages/suckless.scm, gnu/packages/tbb.scm,
gnu/packages/telephony.scm, gnu/packages/text-editors.scm,
gnu/packages/textutils.scm, gnu/packages/time.scm,
gnu/packages/tls.scm, gnu/packages/tor.scm,
gnu/packages/version-control.scm, gnu/packages/video.scm,
gnu/packages/vim.scm, gnu/packages/web.scm,
gnu/packages/wm.scm, gnu/packages/xdisorg.scm,
gnu/packages/xfce.scm, gnu/packages/xml.scm,
gnu/packages/xorg.scm, gnu/services/certbot.scm,
gnu/services/desktop.scm, gnu/services/version-control.scm,
gnu/services/web.scm, guix/import/hackage.scm,
guix/licenses.scm: Likewise.

Signed-off-by: Tobias Geerinckx-Rice <me@tobias.gr>
 2018-03-20 17:17:58 +01:00
Mark H Weaver
647888845c
Merge branch 'master' into core-updates 2018-03-20 00:49:05 -04:00
Tobias Geerinckx-Rice
3def739da1
gnu: Use the CMake build system's #:build-type key. 
* gnu/packages/code.scm (rtags)[arguments]: Move the CMAKE_BUILD_TYPE
from #:configure-flags to #:build-type.
* gnu/packages/databases.scm (apache-arrow)[arguments]: Likewise
* gnu/packages/engineering.scm (kicad)[arguments]: Likewise
* gnu/packages/flashing-tools.scm (heimdall)[arguments]: Likewise
* gnu/packages/graphics.scm (openscenegraph)[arguments]: Likewise
* gnu/packages/linux.scm (rdma-core)[arguments]: Likewise
* gnu/packages/music.scm (portmidi)[arguments]: Likewise
* gnu/packages/photo.scm (rawtherapee)[arguments]: Likewise
* gnu/packages/rdesktop.scm (freerdp)[arguments]: Likewise
* gnu/packages/serialization.scm (flatbuffers)[arguments]: Likewise
* gnu/packages/web.scm (tidy-html)[arguments]: Likewise
 2018-03-17 16:37:28 +01:00
Tobias Geerinckx-Rice
93e8731dcb
gnu: perl-sql-abstract: Update to 1.85. 
* gnu/packages/databases.scm (perl-sql-abstract): Update to 1.85.
 2018-03-17 16:37:19 +01:00
Mark H Weaver
9f388b1ee1
Merge branch 'master' into core-updates 2018-03-17 01:18:37 -04:00
Mark H Weaver
6cbee49d66
gnu: All snippets report errors using exceptions, else return #t. 
* gnu/packages/admin.scm, gnu/packages/algebra.scm, gnu/packages/audio.scm,
gnu/packages/backup.scm, gnu/packages/base.scm,
gnu/packages/bioinformatics.scm, gnu/packages/cdrom.scm,
gnu/packages/chez.scm, gnu/packages/code.scm, gnu/packages/compression.scm,
gnu/packages/cross-base.scm, gnu/packages/crypto.scm, gnu/packages/cups.scm,
gnu/packages/databases.scm, gnu/packages/dns.scm, gnu/packages/emacs.scm,
gnu/packages/emulators.scm, gnu/packages/engineering.scm,
gnu/packages/enlightenment.scm, gnu/packages/fpga.scm,
gnu/packages/freedesktop.scm, gnu/packages/ftp.scm, gnu/packages/games.scm,
gnu/packages/gcc.scm, gnu/packages/geo.scm, gnu/packages/ghostscript.scm,
gnu/packages/gl.scm, gnu/packages/glib.scm, gnu/packages/gnome.scm,
gnu/packages/gnuzilla.scm, gnu/packages/graphics.scm, gnu/packages/gtk.scm,
gnu/packages/guile.scm, gnu/packages/irc.scm, gnu/packages/java.scm,
gnu/packages/kerberos.scm, gnu/packages/linux.scm, gnu/packages/lisp.scm,
gnu/packages/lxde.scm, gnu/packages/machine-learning.scm,
gnu/packages/mail.scm, gnu/packages/maths.scm, gnu/packages/messaging.scm,
gnu/packages/monitoring.scm, gnu/packages/mp3.scm, gnu/packages/music.scm,
gnu/packages/netpbm.scm, gnu/packages/networking.scm, gnu/packages/node.scm,
gnu/packages/nvi.scm, gnu/packages/ocaml.scm, gnu/packages/pdf.scm,
gnu/packages/perl.scm, gnu/packages/php.scm, gnu/packages/plotutils.scm,
gnu/packages/pretty-print.scm, gnu/packages/profiling.scm,
gnu/packages/pulseaudio.scm, gnu/packages/python-crypto.scm,
gnu/packages/python.scm, gnu/packages/qt.scm, gnu/packages/robotics.scm,
gnu/packages/sawfish.scm, gnu/packages/scanner.scm, gnu/packages/scheme.scm,
gnu/packages/scribus.scm, gnu/packages/sdl.scm,
gnu/packages/serialization.scm, gnu/packages/shells.scm,
gnu/packages/slang.scm, gnu/packages/smalltalk.scm, gnu/packages/ssh.scm,
gnu/packages/sync.scm, gnu/packages/syncthing.scm, gnu/packages/tbb.scm,
gnu/packages/terminals.scm, gnu/packages/texinfo.scm,
gnu/packages/text-editors.scm, gnu/packages/textutils.scm,
gnu/packages/tls.scm, gnu/packages/unrtf.scm,
gnu/packages/version-control.scm, gnu/packages/video.scm,
gnu/packages/vpn.scm, gnu/packages/web.scm, gnu/packages/wm.scm,
gnu/packages/wxwidgets.scm, gnu/packages/xdisorg.scm, gnu/packages/xorg.scm:
In all snippets, report errors using exceptions, or else return #t.
 2018-03-16 09:08:31 -04:00
Leo Famulari
5e5ac7102c
gnu: Add python-pyarrow. 
* gnu/packages/databases.scm (python-pyarrow, python2-pyarrow): New variables.
 2018-03-15 10:57:52 -04:00
Leo Famulari
dae7661a0d
gnu: Add apache-arrow. 
* gnu/packages/databases.scm (apache-arrow): New variable.
 2018-03-15 10:57:52 -04:00
Marius Bakke
9a92b9e61a
gnu: gdbm: Update to 1.14.1. 
* gnu/packages/databases.scm (gdbm): Update to 1.14.1.
 2018-03-14 22:11:34 +01:00
Ricardo Wurmus
8c72ed923d
Merge branch 'master' into core-updates 2018-03-14 17:37:20 +01:00
Ludovic Courtès
189be331ac
build-system/gnu: Add 'bootstrap' phase. 
This factorizes what has become a widespread idiom.

* guix/build/gnu-build-system.scm (%bootstrap-scripts): New variable.
(bootstrap): New procedure.
(%standard-phases): Add it after 'unpack'.
* guix/build/ant-build-system.scm (%standard-phases): Delete 'bootstrap.
* guix/build/asdf-build-system.scm (%standard-phases/source)
(%standard-phases): Likewise.
* guix/build/cargo-build-system.scm (%standard-phases): Likewise.
* guix/build/cmake-build-system.scm (%standard-phases): Likewise.
* guix/build/dub-build-system.scm (%standard-phases): Likewise.
* guix/build/emacs-build-system.scm (%standard-phases): Likewise.
* guix/build/font-build-system.scm (%standard-phases): Likewise.
* guix/build/go-build-system.scm (%standard-phases): Likewise.
* guix/build/haskell-build-system.scm (%standard-phases): Likewise.
* guix/build/minify-build-system.scm (%standard-phases): Likewise.
* guix/build/ocaml-build-system.scm (%standard-phases): Likewise.
* guix/build/perl-build-system.scm (%standard-phases): Likewise.
* guix/build/python-build-system.scm (%standard-phases): Likewise.
* guix/build/r-build-system.scm (%standard-phases): Likewise.
* guix/build/ruby-build-system.scm (%standard-phases): Likewise.
* guix/build/scons-build-system.scm (%standard-phases): Likewise.
* guix/build/texlive-build-system.scm (%standard-phases): Likewise.
* guix/build/waf-build-system.scm (%standard-phases): Likewise.
* gnu/packages/audio.scm (faad2)[arguments]: Replace 'bootstrap.
(soundtouch, cuetools, bluez-alsa): Remove 'arguments'.
(cava)[arguments]: Replace 'bootstrap.
* gnu/packages/backup.scm (rdup): Remove 'bootstrap.
* gnu/packages/bioinformatics.scm (seek)[arguments]: Replace
'bootstrap.
* gnu/packages/bioinformatics.scm (htslib-for-sambamba): Remove
'arguments'.
* gnu/packages/ci.scm (hydra, cuirass): Remove 'bootstrap'.
* gnu/packages/crypto.scm (libb2): Remove #:phases.
* gnu/packages/databases.scm (guile-wiredtiger): Likewise.
* gnu/packages/debug.scm (stress-make): Remove 'bootstrap'.
* gnu/packages/documentation.scm (asciidoc): Likewise.
* gnu/packages/fontutils.scm (libuninameslist): Remove 'arguments'.
* gnu/packages/ftp.scm (weex): Remove 'arguments'.
* gnu/packages/game-development.scm (ois): Remove 'arguments'.
* gnu/packages/games.scm (pioneer): Remove 'bootstrap.
* gnu/packages/gnome.scm (vte-ng, byzanz): Replace 'bootstrap.
(arc-theme): Remove 'arguments'.
(faba-icon-theme): Remove 'bootstrap.
(arc-icon-theme): Remove 'arguments'.
* gnu/packages/gnunet.scm (guile-gnunet): Likewise.
* gnu/packages/gtk.scm (guile-rsvg): Likewise.
* gnu/packages/guile.scm (mcron2): Remove 'bootstrap.
(guile-bash): Remove #:phases.
(guile-git): Remove 'bootstrap.
(guile-syntax-highlight): Remove 'arguments'.
(guile-sjson): Likewise.
* gnu/packages/java.scm (classpath-devel): Remove 'bootstrap.
* gnu/packages/kodi.scm (libdvdnav/kodi)
(libdvdread/kodi, libdvdcss/kodi): Likewise.
* gnu/packages/libreoffice.scm (hunspell): Remove 'arguments'.
* gnu/packages/libusb.scm (hidapi): Likewise.
* gnu/packages/linux.scm (bridge-utils): Rename 'bootstrap' to
'patch-stuff'; move it before 'bootstrap', without autoreconf
invocation.
(eudev): Rename 'bootstrap' to 'patch-file-names', without 'autogen.sh'
invocation; move it before 'bootstrap.
(gpm): Replace 'bootstrap'.
(f2fs-tools): Remove 'arguments'.
(rng-tools): Remove #:phases.
* gnu/packages/messaging.scm (hexchat): Rename 'bootstrap' to
'copy-intltool-makefile'; remove "autoreconf" invocation and move before
'bootstrap'.
(libmesode): Remove 'arguments'.
(libstrophe): Likewise.
* gnu/packages/microcom.scm (microcom): Likewise.
* gnu/packages/networking.scm (libnet): Remove 'bootstrap.
* gnu/packages/onc-rpc.scm (libnsl): Remove 'arguments'.
* gnu/packages/package-management.scm (guix): Replace 'bootstrap.
* gnu/packages/sawfish.scm (librep): Remove 'arguments'.
* gnu/packages/version-control.scm (findnewest): Likewise.
* gnu/packages/video.scm (liba52, handbrake, motion): Replace
'bootstrap.
* gnu/packages/web.scm (fcgiwrap): Remove #:phases.
(tidy): Replace 'bootstrap.
(gumbo-parser): Remove #:phases.
* gnu/packages/wget.scm (wget2): Replace 'bootstrap.
* gnu/packages/wm.scm (i3lock-color): Remove #:phases.
* gnu/packages/xdisorg.scm (xclip): Likewise.
* gnu/packages/xml.scm (libxls): Replace 'bootstrap'.
* gnu/packages/xorg.scm (xf86-video-freedreno)
(xf86-video-intel): Remove #:phases.
* gnu/packages/zile.scm (zile-on-guile): Replace 'bootstrap.
 2018-03-11 22:04:40 +01:00
Marius Bakke
7fa9cca84a
gnu: rocksdb: Update to 5.10.4. 
* gnu/packages/databases.scm (rocksdb): Update to 5.10.4.
[source]: Substitute the unbundled copy of GNU Parallel.
[arguments]: Add "V=1" "USE_RTTI=1" and
"ROCKSDBTESTS_END=db_tailing_iter_test" to #:make-flags.  Set #:test-target to
"check_some".  Respect parallel jobs in 'build-release-libraries' phase and
rename to 'build'.
[license]: Update for changes in 5.5.4.
 2018-03-04 17:54:39 +01:00
Efraim Flashner
c553b08b49
gnu: python-apsw: Use invoke. 
* gnu/packages/databases.scm (python-apsw)[arguments]: Use invoke.
 2018-03-04 12:05:14 +02:00
Efraim Flashner
f5c847ebd0
gnu: python-apsw: Declare a source file-name. 
* gnu/packages/databases.scm (python-apsw)[source]: Declare a source
file-name.
 2018-03-04 12:05:14 +02:00
Leo Famulari
703a8b7dc5
gnu: postgresql@9.6: Update to 9.6.8 [fixes CVE-2018-1058]. 
* gnu/packages/databases.scm (postgresql-9.6): Update to 9.6.8.
 2018-03-01 20:01:48 -05:00
Leo Famulari
bb17b2be49
gnu: postgresql: Update to 10.3 [fixes CVE-2018-1058]. 
* gnu/packages/databases.scm (postgresql): Update to 10.3.
 2018-03-01 20:01:48 -05:00
Leo Famulari
e9802319f7
gnu: memcached: Update to 1.5.6. 
* gnu/packages/databases.scm (memcached): Update to 1.5.6.
 2018-03-01 20:00:12 -05:00
Ricardo Wurmus
29c9c9c2c1
gnu: r-rmysql: Update to 0.10.14. 
* gnu/packages/databases.scm (r-rmysql): Update to 0.10.14.
 2018-03-01 21:28:53 +01:00
Marius Bakke
ff856cfdcc
gnu: python-pickleshare: Run the tests. 
* gnu/packages/databases.scm (python-pickleshare)[arguments]: Replace CHECK-PHASE.
[native-inputs]: Add PYTHON-PYTEST.
 2018-02-26 04:50:30 +01:00
Marius Bakke
ed519b3c1f
gnu: python-pickleshare: Update to 0.7.4. 
* gnu/packages/databases.scm (python-pickleshare): Update to 0.7.4.
[source](uri): Use PYPI-URI.
[propagated-inputs]: Remove.
[properties]: Delay python2 variant.
(python2-pickleshare)[propagated-inputs]: Add PYTHON2-PATHLIB2.
 2018-02-26 04:49:52 +01:00
Ludovic Courtès
cff07bde98
gnu: sqlite: Fix source URL. 
* gnu/packages/databases.scm (sqlite)[source]: Change "/2017" to
"/2018".
 2018-02-24 23:11:49 +01:00
Marius Bakke
eaa7b9664e
gnu: gdbm: Update to 1.14. 
* gnu/packages/databases.scm (gdbm): Update to 1.14.
 2018-02-20 19:54:24 +01:00
Marius Bakke
e83f62f947
gnu: sqlite: Update to 3.22.0. 
* gnu/packages/databases.scm (sqlite): Update to 3.22.0.
 2018-02-20 16:01:46 +01:00
Mark H Weaver
150062f190
Merge branch 'master' into core-updates 2018-02-16 13:14:26 -05:00
Tobias Geerinckx-Rice
8c078ddec4
gnu: perl-dbd-pg: Update to 3.7.4. 
* gnu/packages/databases.scm (perl-dbd-pg): Update to 3.7.4.
 2018-02-16 11:15:02 +01:00
Mark H Weaver
efe2a2833c
Merge branch 'master' into core-updates 2018-02-09 01:46:34 -05:00
Leo Famulari
2c433a1612
gnu: postgresql: Update to 10.2 [CVE-2018-{1052,1053}]. 
* gnu/packages/databases.scm (postgresql): Update to 10.2.
 2018-02-08 17:47:52 -05:00
Mark H Weaver
e7ca634912
Merge branch 'master' into core-updates 2018-02-03 22:46:07 -05:00
Christopher Baines
9b32bf6e6c
gnu: Fix and improve the mongo-tools package. 
The hash of the source for this package is wrong. Most probably because the
source was changed from a tarball to a git repository without updating the
hash. Fixing this seems to break the check phase, so I rewrote that as well,
making changes to the build and install phases as needed.

* gnu/packages/databases.scm (mongo-tools)[source]: Update the hash value.
  [arguments]: Remove the different unpack path, as this isn't necessary when
  using the git repository as a source. Move the list of tools to make it
  accessible from multiple phases. Rewrite the build phase, getting it to
  install the tools in to the location the tests seem to expect to find
  them. Replace the check phase to run the tests for each tool
  individually. Add an install phase to install the tools, now that go install
  is not being run in the build phase.
  [native-inputs]: Add go-github.com-smartystreets-goconvey as a native-input
  as this is required for running the tests.
 2018-02-01 20:21:25 +00:00
Marius Bakke
bee7bb315c
Merge branch 'master' into core-updates 2018-02-01 13:18:47 +01:00
Christopher Baines
33c88fcb25
gnu: Add mongo-tools. 
* gnu/packages/databases.scm (mongo-tools): New variable.
 2018-01-30 07:41:31 +00:00
Christopher Baines
5807172300
gnu: Add go-gopkg.in-mgo.v2. 
* gnu/packages/databases.scm (go-gopkg.in-mgo.v2): New variable.
 2018-01-30 07:41:30 +00:00
Mark H Weaver
b9ed5ef3fb
gnu: Add sqlite-with-fts5. 
* gnu/packages/databases.scm (sqlite-with-fts5): New variable.
 2018-01-28 00:23:32 -05:00
Mark H Weaver
b89d8a4271
Merge branch 'master' into core-updates 2018-01-26 00:15:26 -05:00
Tobias Geerinckx-Rice
bbf9092b9d
gnu: 4store: Update URI. 
* gnu/packages/databases.scm (4store)[source, home-page]: Update URI.
 2018-01-26 00:09:19 +01:00